pycom01g19030

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
17823139 .. 17825787
2649 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g19030.1

Sequence Viewer

Length: 2649 bp
ATGACCGGTCACATCCACGAGCTGCATCTTAATAATTCCGAACCTTATTTGGAGTCTTCCTTCCGTGGTAAGATAAATCCTTCTTTGCTCAGTTTAAAGCATCTCAACTACTTGGACTTGAGTCAAAATAATTTCAGTACAACACGAATTCCCAGTTTCTTTGGTTCTATGACAAGTTTAACACACCTTAATCTTGGATACTCATGGTTTGATGGAGTAATTCCTCATAAACTGGGAAATCTCTCCAGTCTACGCTATCTCGCTCTCAGTAGTTACACTCTGACGGTTGAGAACCTTCGGTGGATTTCTGGTCTTTCTCTGCTAAAACACTTGGACTTGAGCCATGTAGATCGTACCAAAGCATCTGACTGGTTGCAAGTTACAAACATGCTTCCTTCTTTGGCAGAGTTAATTATGTTTGATTGTCAACTTGATCAAATTCCCCATCTACCCACCGCAAATTTGACTTCCCTGGTTGTCCTAGATCTTTCTAGAAACAGTTTTAATTCTTTGATGCTAAGGGGGGTTTTCAGTCTTACAAATCTAGTTTCTCTTCATCTCAGTGATTGTGGTTTCCAAGGTCCAATTCCTAGCATTTCACAGAATATCACATCTTTGAGGGAAATTGATTTGTCATACAATTCTATTAGTCTTGATCCGATTCCCAATTCTATTCAGAATATGACTGGTCTTAAAGTCCTTAATCTTGAGGGGAACAACAATCTCGAGTCCTTGCTTCTTTCTTACAATTTATTACGCGGTGAAATATCGAGTTCCATTGGAAACATGACATCCCTTGTCAATCTTTACTTGGATAATAATCTGTTGGAGGGGAAAATCCCAAATTCTTTGGGACATCTTTGTAAGTTGAAAGTTCTTGATCTGTCAGAGAACCATTTTACGGTTCGAAGACCATTCAAAATCTTTGAAAGTTTGTCCAGATGTGGTCCGGATGGAATAAAGTCATTGTCGTTGAGTTATACTAATATATCAGGTCCCATTCCAATGTCACTAGGAAATCTGTCAAGCTTGGAAAAATTGGACATATCTAGAAATCAGTTTAATGGAACTTTCACAGAAGTTATTGGTCAACTCAAAATGCTAACGGATTTGGATATATCTTATAATTCGTTAGAAGGTGCAGTGTCGGAAGTTTCCTTTAGCAACCTTACAAAGTTGAAGCATTTCATTGCAGAAGGAAACTCATTAACTCTGAAAACTAGTCGAGATTGGGTTCCTCCTTTTCAACTTGAAATTTTGCAGCTGGATTCCTGGCATTTGGGGCCTGAATGGCCGATGTGGTTGCGGACACAAACGCAATTAAAAGAACTAAGCTTGTCTGGTACACAAATTTCAAGTACTATTCCAACTTGGTTTTGGAACTTAACTTCCCAAGTACAATCTCTGAATCTCTCTCACAATCAGTTGTATGGGCAGATTCCAAATATATTTGTTGCTCCATATTCAATGGTTGATCTTAGTTCTAACCATTTCACTGGTGCATTGCCTATTGTTCCCACCTCATTAGAATGGCTAGATCTTTCCAATTCATCATTTTCTGGATCTGTTTTCCACTTCTTCTGTGATAGGCCGGATGAAACAAAGCAACTTTATGTTCTTCATCTCGGGAACAATTTTCTCACTGGAAAAGTACCCGATTGTTGGATGAGTTGGCAATACTTGAGCTTCCTAAATTTAGAAAACAACAACCTAACTGGGAATGTCCCAATGGCCATGGGATACTTGCAACTTCTGGGATCCCTGCACTTGCGCAATAATCACCTGTACGGAGAATTGCCACATTCCCTGCAGAACTGTACCTCGTTGTCAGTTGTTGACCTTAGTGAAAATGGGTTTTCCGGAAGCGTACCAATATGGATAGGGAAAAGCCTTTCAGGATTGCATGTTCTTAACCTTCGTTCAAATAAGTTTGAAGGAGATATTCCTAATGAAGTTTGTTATTTGAAAAGTCTCCAGATATTGGACCTTGCGCATAACAAACTCTCAGGAATGATACCGAGATGCTTCCACAATTTGAGCGCATTGGCTAATTTTTCAGAATCATTTTCTCCAACTAGAATGTATGGGGCTAATTTTACAGAGAATGAAATCTTGGTAACGAAAGGGATAGAAATGGAATATAGCAAGATTCTGGGATTCGTAAAGGGCATGGACCTTTCATGCAACTTTATGTATGGAGAGATCCCTGAAGAACTTACCGGCCTCCTCGCATTGCAGTCCCTCAATTTATCGAATAATCGCTTCACTGGAAGAATTCCTTCAAAGATTGGTAATATGGCACAGTTAGAATCTCTCGATTTTTCCATGAACCAACTTGATGGTGAAATTCCTCCAAGCATGACGAATTTGACATTTCTGAGTCACTTAAACTTGGCCTACAACAATTTGACGGGACGAATTCCGGAAAGCACTCAACTGCAGAGCCTCGATCAGTCGAGCTTCGTCGGCAACGAACTATGCGGAGCTCCACTCAACAAGAATTGCAGCACGGATGGGGTGATACCGCCACCAACAGTTGAGCAAGACGGAGGAGGTGGATACCGTTTACTAGAAGATGGGTGGTTCTACGTGAGCTTAGGAGTTGGATTCTTCACGGGTTTTGGATTGTGCTTGGTTCTTTGCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

883

Amino Acids

98.19

Weight (kDa)

5.51

Isoelectric Point (pI)

32.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 30 - 137 3.4e-06 Leucine-rich repeat region
LRR_8 PF13855 34 - 91 4.1e-06 Leucine rich repeat
LRR_14 PF23598 259 - 446 4.4e-10 Leucine-rich repeat region
LRR_8 PF13855 343 - 403 6.2e-08 Leucine rich repeat
LRR_8 PF13855 608 - 668 2.2e-06 Leucine rich repeat
LRR_8 PF13855 633 - 683 5.6e-07 Leucine rich repeat
LRR_14 PF23598 728 - 819 1.4e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1125
Acc16I TGCGCA 2 cut(s) 1772, 1992
AccB7I CCANNNNNTGG 1 cut(s) 1981
AccI GTMKAC 1 cut(s) 250
AccII CGCG 1 cut(s) 759
AccIII TCCGGA 3 cut(s) 949, 1859, 2422
AciI CCGC 5 cut(s) 456, 759, 1306, 2481, 2525
AclWI GGATC 5 cut(s) 650, 1570, 1752, 1765, 2197
AcoI YGGCCR 2 cut(s) 1292, 1731
AcuI CTGAAG 1 cut(s) 2229
AfaI GTAC 9 cut(s) 139, 355, 1345, 1360, 1398, 1653, 1787, 1819, 1869
AfiI CCNNNNNNNGG 3 cut(s) 901, 1662, 1981
AgeI ACCGGT 1 cut(s) 5
AhlI ACTAGT 1 cut(s) 1220
AjnI CCWGG 2 cut(s) 471, 1271
AjuI GAANNNNNNNTTGG 4 cut(s) 570, 602, 2096, 2128
AloI GAACNNNNNNTCC 4 cut(s) 1373, 1405, 1890, 1922
AluBI AGCT 8 cut(s) 22, 1029, 1264, 1335, 1686, 2460, 2486, 2595
AluI AGCT 8 cut(s) 22, 1029, 1264, 1335, 1686, 2460, 2486, 2595
Alw21I GWGCWC 1 cut(s) 2488
Alw26I GTCTC 1 cut(s) 1976
AlwI GGATC 5 cut(s) 650, 1570, 1752, 1765, 2197
Ama87I CYCGRG 2 cut(s) 725, 1625
Aor13HI TCCGGA 3 cut(s) 949, 1859, 2422
AoxI GGCC 6 cut(s) 1283, 1292, 1589, 1731, 2221, 2394
ApeKI GCWGC 3 cut(s) 22, 1261, 2505
AsiGI ACCGGT 1 cut(s) 5
Asp700I GAANNNNTTC 2 cut(s) 1184, 2278
AspLEI GCGC 3 cut(s) 1773, 1993, 2042
AspS9I GGNCC 6 cut(s) 581, 947, 995, 1283, 1984, 2173
AsuHPI GGTGA 4 cut(s) 773, 1772, 2354, 2530
AsuII TTCGAA 1 cut(s) 907
AvaI CYCGRG 2 cut(s) 725, 1625
AvaII GGWCC 5 cut(s) 581, 947, 995, 1984, 2173
BalI TGGCCA 1 cut(s) 1733
BamHI GGATCC 1 cut(s) 1757
BanII GRGCYC 1 cut(s) 2488
BauI CACGAG 1 cut(s) 17
BbsI GAAGAC 2 cut(s) 48, 916
Bbv12I GWGCWC 1 cut(s) 2488
BbvI GCAGC 3 cut(s) 9, 1273, 2517
BccI CCATC 6 cut(s) 206, 453, 947, 2333, 2507, 2570
BcgI CGANNNNNNTGC 2 cut(s) 1285, 1319
BciT130I CCWGG 2 cut(s) 473, 1273
BciVI GTATCC 3 cut(s) 191, 1733, 2552
BclI TGATCA 1 cut(s) 433
BcoDI GTCTC 1 cut(s) 1976
BcuI ACTAGT 1 cut(s) 1220
BfmI CTRYAG 2 cut(s) 1808, 2438
BfuI GTATCC 3 cut(s) 191, 1733, 2552
BglI GCCNNNNNGGC 1 cut(s) 1291
BglII AGATCT 2 cut(s) 484, 1537
BisI GCNGC 3 cut(s) 23, 1262, 2506
BlsI GCNGC 3 cut(s) 24, 1263, 2507
BmcAI AGTACT 1 cut(s) 1360
Bme1390I CCNGG 2 cut(s) 473, 1273
Bme18I GGWCC 5 cut(s) 581, 947, 995, 1984, 2173
BmeT110I CYCGRG 2 cut(s) 725, 1625
BmgT120I GGNCC 6 cut(s) 581, 947, 995, 1283, 1984, 2173
BmiI GGNNCC 4 cut(s) 997, 1236, 1284, 1759
BmrFI CCNGG 2 cut(s) 473, 1273
BmrI ACTGGG 3 cut(s) 147, 242, 1725
BmsI GCATC 5 cut(s) 34, 109, 371, 504, 2012
BmuI ACTGGG 3 cut(s) 147, 242, 1725
BoxI GACNNNNGTC 1 cut(s) 120
BpiI GAAGAC 2 cut(s) 48, 916
BplI GAGNNNNNCTC 2 cut(s) 2475, 2507
BpmI CTGGAG 2 cut(s) 229, 1958
Bpu10I CCTNAGC 2 cut(s) 518, 2596
Bpu14I TTCGAA 1 cut(s) 907
BpuEI CTTGAG 4 cut(s) 139, 358, 728, 1702
BsaAI YACGTR 1 cut(s) 2590
BsaBI GATNNNNATC 1 cut(s) 819
BsaJI CCNNGG 4 cut(s) 64, 471, 577, 1734
BsaWI WCCGGW 4 cut(s) 5, 949, 1859, 2422
Bsc4I CCNNNNNNNGG 3 cut(s) 901, 1662, 1981
Bse118I RCCGGY 2 cut(s) 5, 2219
Bse1I ACTGG 9 cut(s) 153, 237, 246, 374, 691, 1501, 1648, 1720, 2272
Bse3DI GCAATG 3 cut(s) 1188, 1502, 2231
Bse8I GATNNNNATC 1 cut(s) 819
BseAI TCCGGA 3 cut(s) 949, 1859, 2422
BseBI CCWGG 2 cut(s) 473, 1273
BseDI CCNNGG 4 cut(s) 64, 471, 577, 1734
BseGI GGATG 6 cut(s) 12, 791, 958, 1600, 1671, 2518
BseJI GATNNNNATC 1 cut(s) 819
BseLI CCNNNNNNNGG 3 cut(s) 901, 1662, 1981
BseMI GCAATG 3 cut(s) 1188, 1502, 2231
BseMII CTCAG 5 cut(s) 103, 280, 574, 2019, 2369
BseNI ACTGG 9 cut(s) 153, 237, 246, 374, 691, 1501, 1648, 1720, 2272
BseRI GAGGAG 2 cut(s) 2216, 2565
BseXI GCAGC 3 cut(s) 9, 1273, 2517
BsgI GTGCAG 2 cut(s) 1161, 1748
Bsh1236I CGCG 1 cut(s) 759
BshFI GGCC 6 cut(s) 1285, 1294, 1591, 1733, 2223, 2396
BshTI ACCGGT 1 cut(s) 5
BsiHKAI GWGCWC 1 cut(s) 2488
BsiHKCI CYCGRG 2 cut(s) 725, 1625
BsiSI CCGG 6 cut(s) 6, 950, 1592, 1860, 2220, 2423
BslFI GGGAC 5 cut(s) 867, 981, 1709, 2224, 2427
BslI CCNNNNNNNGG 3 cut(s) 901, 1662, 1981
BsmAI GTCTC 1 cut(s) 1976
BsmFI GGGAC 5 cut(s) 867, 981, 1709, 2224, 2427
BsnI GGCC 6 cut(s) 1285, 1294, 1591, 1733, 2223, 2396
BsoBI CYCGRG 2 cut(s) 725, 1625
Bsp119I TTCGAA 1 cut(s) 907
Bsp1286I GDGCHC 1 cut(s) 2488
Bsp13I TCCGGA 3 cut(s) 949, 1859, 2422
Bsp19I CCATGG 1 cut(s) 1734
BspACI CCGC 5 cut(s) 456, 759, 1306, 2481, 2525
BspANI GGCC 6 cut(s) 1285, 1294, 1591, 1733, 2223, 2396
BspCNI CTCAG 5 cut(s) 102, 279, 573, 2018, 2370
BspEI TCCGGA 3 cut(s) 949, 1859, 2422
BspFNI CGCG 1 cut(s) 759
BspLI GGNNCC 4 cut(s) 997, 1236, 1284, 1759
BspMAI CTGCAG 2 cut(s) 1812, 2442
BspPI GGATC 5 cut(s) 650, 1570, 1752, 1765, 2197
BspT104I TTCGAA 1 cut(s) 907
BsrDI GCAATG 3 cut(s) 1188, 1502, 2231
BsrFI RCCGGY 2 cut(s) 5, 2219
BsrI ACTGG 9 cut(s) 153, 237, 246, 374, 691, 1501, 1648, 1720, 2272
BssAI RCCGGY 2 cut(s) 5, 2219
BssECI CCNNGG 4 cut(s) 64, 471, 577, 1734
BssSI CACGAG 1 cut(s) 17
BssT1I CCWWGG 2 cut(s) 577, 1734
Bst2BI CACGAG 1 cut(s) 17
Bst2UI CCWGG 2 cut(s) 473, 1273
Bst4CI ACNGT 7 cut(s) 286, 500, 904, 1817, 2304, 2536, 2564
Bst6I CTCTTC 1 cut(s) 558
BstBAI YACGTR 1 cut(s) 2590
BstBI TTCGAA 1 cut(s) 907
BstDSI CCRYGG 2 cut(s) 64, 1734
BstF5I GGATG 6 cut(s) 12, 791, 958, 1600, 1671, 2518
BstFNI CGCG 1 cut(s) 759
BstHHI GCGC 3 cut(s) 1773, 1993, 2042
BstMAI GTCTC 1 cut(s) 1976
BstMWI GCNNNNNNNGC 3 cut(s) 1282, 1291, 2466
BstNI CCWGG 2 cut(s) 473, 1273
BstNSI RCATGY 2 cut(s) 391, 1907
BstPAI GACNNNNGTC 1 cut(s) 120
BstSCI CCNGG 2 cut(s) 471, 1271
BstSFI CTRYAG 2 cut(s) 1808, 2438
BstUI CGCG 1 cut(s) 759
BstV1I GCAGC 3 cut(s) 9, 1273, 2517
BstV2I GAAGAC 2 cut(s) 48, 916
BstX2I RGATCY 5 cut(s) 484, 1537, 1562, 1757, 2202
BstXI CCANNNNNNTGG 2 cut(s) 1496, 2339
BstYI RGATCY 5 cut(s) 484, 1537, 1562, 1757, 2202
BsuI GTATCC 3 cut(s) 191, 1733, 2552
BsuRI GGCC 6 cut(s) 1285, 1294, 1591, 1733, 2223, 2396
BtgI CCRYGG 2 cut(s) 64, 1734
BtsCI GGATG 6 cut(s) 12, 791, 958, 1600, 1671, 2518
BtsI GCAGTG 1 cut(s) 1149
BtsIMutI CAGTG 5 cut(s) 568, 1149, 1494, 1641, 2265
CfoI GCGC 3 cut(s) 1773, 1993, 2042
Cfr10I RCCGGY 2 cut(s) 5, 2219
Cfr13I GGNCC 6 cut(s) 581, 947, 995, 1283, 1984, 2173
Csp6I GTAC 9 cut(s) 138, 354, 1344, 1359, 1397, 1652, 1786, 1818, 1868
CspAI ACCGGT 1 cut(s) 5
CviQI GTAC 9 cut(s) 138, 354, 1344, 1359, 1397, 1652, 1786, 1818, 1868
DraI TTTAAA 1 cut(s) 96
EaeI YGGCCR 2 cut(s) 1292, 1731
Eam1104I CTCTTC 1 cut(s) 558
EarI CTCTTC 1 cut(s) 558
Ecl136II GAGCTC 1 cut(s) 2486
Eco130I CCWWGG 2 cut(s) 577, 1734
Eco24I GRGCYC 1 cut(s) 2488
Eco47I GGWCC 5 cut(s) 581, 947, 995, 1984, 2173
Eco53kI GAGCTC 1 cut(s) 2486
Eco57I CTGAAG 1 cut(s) 2229
Eco88I CYCGRG 2 cut(s) 725, 1625
EcoICRI GAGCTC 1 cut(s) 2486
EcoO109I RGGNCCY 2 cut(s) 995, 1283
EcoRI GAATTC 3 cut(s) 147, 2274, 2418
EcoRII CCWGG 2 cut(s) 471, 1271
EcoT14I CCWWGG 2 cut(s) 577, 1734
EcoT38I GRGCYC 1 cut(s) 2488
ErhI CCWWGG 2 cut(s) 577, 1734
FalI AAGNNNNNCTT 2 cut(s) 2263, 2295
FaqI GGGAC 5 cut(s) 867, 981, 1709, 2224, 2427
FbaI TGATCA 1 cut(s) 433
FblI GTMKAC 1 cut(s) 250
Fnu4HI GCNGC 3 cut(s) 23, 1262, 2506
FokI GGATG 5 cut(s) 778, 965, 1607, 1678, 2525
FriOI GRGCYC 1 cut(s) 2488
Fsp4HI GCNGC 3 cut(s) 23, 1262, 2506
FspI TGCGCA 2 cut(s) 1772, 1992
GlaI GCGC 3 cut(s) 1772, 1992, 2041
GluI GCNGC 3 cut(s) 23, 1262, 2506
GsuI CTGGAG 2 cut(s) 229, 1958
HaeIII GGCC 6 cut(s) 1285, 1294, 1591, 1733, 2223, 2396
HapII CCGG 6 cut(s) 6, 950, 1592, 1860, 2220, 2423
HhaI GCGC 3 cut(s) 1773, 1993, 2042
Hin6I GCGC 3 cut(s) 1771, 1991, 2040
HinP1I GCGC 3 cut(s) 1771, 1991, 2040
HincII GTYRAC 3 cut(s) 428, 1091, 1837
HindII GTYRAC 3 cut(s) 428, 1091, 1837
HindIII AAGCTT 2 cut(s) 1027, 1333
HpaII CCGG 6 cut(s) 6, 950, 1592, 1860, 2220, 2423
HphI GGTGA 4 cut(s) 773, 1772, 2354, 2530
Hpy166II GTNNAC 6 cut(s) 251, 428, 1091, 1346, 1837, 2567
Hpy8I GTNNAC 6 cut(s) 251, 428, 1091, 1346, 1837, 2567
Hpy99I CGWCG 1 cut(s) 2468
HpyAV CCTTC 9 cut(s) 70, 90, 305, 405, 1130, 1190, 1925, 1928, 2289
HpyCH4III ACNGT 7 cut(s) 286, 500, 904, 1817, 2304, 2536, 2564
HpyCH4IV ACGT 1 cut(s) 2589
HpyF10VI GCNNNNNNNGC 3 cut(s) 1282, 1291, 2466
HpySE526I ACGT 1 cut(s) 2589
HspAI GCGC 3 cut(s) 1771, 1991, 2040
Kpn2I TCCGGA 3 cut(s) 949, 1859, 2422
Ksp22I TGATCA 1 cut(s) 433
LmnI GCTCC 3 cut(s) 1462, 2483, 2491
Lsp1109I GCAGC 3 cut(s) 9, 1273, 2517
LweI GCATC 5 cut(s) 34, 109, 371, 504, 2012
MaeII ACGT 1 cut(s) 2589
MaeIII GTNAC 6 cut(s) 8, 272, 379, 1008, 2116, 2381
MboII GAAGA 9 cut(s) 48, 545, 921, 1570, 1610, 2222, 2283, 2585, 2602
MflI RGATCY 5 cut(s) 484, 1537, 1562, 1757, 2202
MhlI GDGCHC 1 cut(s) 2488
MlsI TGGCCA 1 cut(s) 1733
MluNI TGGCCA 1 cut(s) 1733
MlyI GAGTC 4 cut(s) 62, 130, 737, 2389
MmeI TCCRAC 6 cut(s) 807, 1128, 1391, 1643, 2096, 2584
Mox20I TGGCCA 1 cut(s) 1733
MroI TCCGGA 3 cut(s) 949, 1859, 2422
MroXI GAANNNNTTC 2 cut(s) 1184, 2278
MscI TGGCCA 1 cut(s) 1733
MslI CAYNNNNRTG 3 cut(s) 561, 1004, 1528
Msp20I TGGCCA 1 cut(s) 1733
MspA1I CMGCKG 1 cut(s) 1264
MspI CCGG 6 cut(s) 6, 950, 1592, 1860, 2220, 2423
MspR9I CCNGG 2 cut(s) 473, 1273
MvaI CCWGG 2 cut(s) 473, 1273
MvnI CGCG 1 cut(s) 759
MwoI GCNNNNNNNGC 3 cut(s) 1282, 1291, 2466
NcoI CCATGG 1 cut(s) 1734
NlaIV GGNNCC 4 cut(s) 997, 1236, 1284, 1759
NmuCI GTSAC 3 cut(s) 8, 1008, 2381
NsbI TGCGCA 2 cut(s) 1772, 1992
NspI RCATGY 2 cut(s) 391, 1907
NspV TTCGAA 1 cut(s) 907
PaeR7I CTCGAG 1 cut(s) 725
PcsI WCGNNNNNNNCGW 1 cut(s) 2469
PdmI GAANNNNTTC 2 cut(s) 1184, 2278
PfeI GAWTC 9 cut(s) 661, 1268, 1408, 1438, 2060, 2149, 2157, 2309, 2607
PflMI CCANNNNNTGG 1 cut(s) 1981
PinAI ACCGGT 1 cut(s) 5
PkrI GCNGC 3 cut(s) 24, 1263, 2507
PleI GAGTC 4 cut(s) 61, 129, 736, 2388
PpsI GAGTC 4 cut(s) 61, 129, 736, 2388
Ppu21I YACGTR 1 cut(s) 2590
PpuMI RGGWCCY 1 cut(s) 995
PshAI GACNNNNGTC 1 cut(s) 120
PsiI TTATAA 1 cut(s) 1125
Psp124BI GAGCTC 1 cut(s) 2488
Psp5II RGGWCCY 1 cut(s) 995
Psp6I CCWGG 2 cut(s) 471, 1271
PspGI CCWGG 2 cut(s) 471, 1271
PspN4I GGNNCC 4 cut(s) 997, 1236, 1284, 1759
PspPI GGNCC 6 cut(s) 581, 947, 995, 1283, 1984, 2173
PspPPI RGGWCCY 1 cut(s) 995
PstI CTGCAG 2 cut(s) 1812, 2442
PsuI RGATCY 5 cut(s) 484, 1537, 1562, 1757, 2202
PvuII CAGCTG 1 cut(s) 1264
RsaI GTAC 9 cut(s) 139, 355, 1345, 1360, 1398, 1653, 1787, 1819, 1869
RsaNI GTAC 9 cut(s) 138, 354, 1344, 1359, 1397, 1652, 1786, 1818, 1868
RseI CAYNNNNRTG 3 cut(s) 561, 1004, 1528
SacI GAGCTC 1 cut(s) 2488
SatI GCNGC 3 cut(s) 23, 1262, 2506
Sau96I GGNCC 6 cut(s) 581, 947, 995, 1283, 1984, 2173
ScaI AGTACT 1 cut(s) 1360
SchI GAGTC 4 cut(s) 62, 130, 737, 2389
ScrFI CCNGG 2 cut(s) 473, 1273
SduI GDGCHC 1 cut(s) 2488
SfaNI GCATC 5 cut(s) 34, 109, 371, 504, 2012
SfcI CTRYAG 2 cut(s) 1808, 2438
SfiI GGCCNNNNNGGCC 1 cut(s) 1291
Sfr274I CTCGAG 1 cut(s) 725
SfuI TTCGAA 1 cut(s) 907
SinI GGWCC 5 cut(s) 581, 947, 995, 1984, 2173
SlaI CTCGAG 1 cut(s) 725
SmiMI CAYNNNNRTG 3 cut(s) 561, 1004, 1528
SmlI CTYRAG 5 cut(s) 118, 337, 707, 725, 1681
SmoI CTYRAG 5 cut(s) 118, 337, 707, 725, 1681
SpeI ACTAGT 1 cut(s) 1220
SsiI CCGC 5 cut(s) 456, 759, 1306, 2481, 2525
SstI GAGCTC 1 cut(s) 2488
StyD4I CCNGG 2 cut(s) 471, 1271
StyI CCWWGG 2 cut(s) 577, 1734
TaaI ACNGT 7 cut(s) 286, 500, 904, 1817, 2304, 2536, 2564
TaiI ACGT 1 cut(s) 2592
TaqI TCGA 8 cut(s) 726, 770, 907, 1225, 2252, 2316, 2448, 2456
TatI WGTACW 3 cut(s) 137, 1358, 1396
TfiI GAWTC 9 cut(s) 661, 1268, 1408, 1438, 2060, 2149, 2157, 2309, 2607
TscAI CASTG 5 cut(s) 568, 1149, 1501, 1648, 2272
TseFI GTSAC 3 cut(s) 8, 1008, 2381
TseI GCWGC 3 cut(s) 22, 1261, 2505
Tsp45I GTSAC 3 cut(s) 8, 1008, 2381
TspDTI ATGAA 9 cut(s) 545, 1177, 1539, 1610, 1611, 1965, 2121, 2169, 2342
TspGWI ACGGA 5 cut(s) 53, 1121, 1803, 2525, 2562
TspRI CASTG 5 cut(s) 568, 1149, 1501, 1648, 2272
Van91I CCANNNNNTGG 1 cut(s) 1981
VpaK11BI GGWCC 5 cut(s) 581, 947, 995, 1984, 2173
XbaI TCTAGA 2 cut(s) 491, 1049
XceI RCATGY 2 cut(s) 391, 1907
XcmI CCANNNNNNNNNTGG 1 cut(s) 1374
XhoI CTCGAG 1 cut(s) 725
XmiI GTMKAC 1 cut(s) 250
XmnI GAANNNNTTC 2 cut(s) 1184, 2278
ZrmI AGTACT 1 cut(s) 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.