MD06G1026600.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
3273930 .. 3276854
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1026600.v1.1.491

Sequence Viewer

Length: 2925 bp
ATGGAGAGAAGCATGAGAGTTGTTTTACTACTAATCAGGGTTCTTGCTATTGCAACCATTACTTTCAGTATTGGTTTATGCAATGGAATACCCGGTTGGCCTCCGCTTTGCAAAGAAAGCGAAAGACAAGCACTTCTGATGTTCAAGCAAGATCTCGAGGACCCTGCCAATCGACTTTCTTCGTGGGTTGCAGAAGAAGGTTCAGACTGTTGCAGTTGGACAGGAGTTGTCTGTGATCACATAACCGGCCACATTCACGAGCTGCACCTTAATAGTTCCGACTCTGATTGGGATTTCAACCGTTCCTTCGGTGGTAAGATAAATTCTTCTTTGCTCGGTTTAAAGCATCTCAACTACTTGGACTTGAGTAACAATTATTTCAGTACAACACAAATTCCTAGTTTCTTTGGTTCTATGACAAGTTTAACACACCTTAATCTTGGAGACTCATCGTTTGATGGAGTAATTCCTCATCAACTAGGAAATCTGTCCAGTCTACGCTATCTCAATCTCAGTAGTTACATTCTGAAGGTTGAGAACCTTCAGTGGATTTCTGGTCTTTCTCTGCTAAAACAGTTGGACTTGAGTTTTGTAAATCTTAGCAAAGCATCTGACTGGTTGCAAGTTACAAACATGCTTCCTTGTTTGGTACAGTTAATTATGTCCGATTGTGTACTTCATCATCCTCCCCCTCTACCCACCATAAATTTTACTTCCCTGGTCGTCCTTGACCTTTCTTACAACAGTTTTAATTCTTTGATGCCGAGATGGGTTTTCAATATTAAAAATCTAGTTTCTCTTCGTCTCACTGGTTGTGATTTCCAAGGTCCAATTCCTGGTATTTCACAGAATATCACATCTTTGAGGGAAATTGATTTGTCATTCAATTCTATTAATCTTGATCCGGATCCCAAATGGTTGTTTAACCAAAAAATCCTTGAATTGAATCTAGAAGCCAATCAACTTTCAGGCCAACTTCCAAGCAGTATTCAAAATATGACTTGTCTTAAAGTTCTTAATCTCAGGGAGAACGACTTCAATTCTACCATATCTGAATGGTTGTATAGCTTGAACAATCTCGAGTCCTTACTTCTTTCTCACAATGCCTTACGTGGTGAAATATCGAGTTCCATTGGAAACCTTAAAAGTTTAAGGCACTTTGATCTTTCAAGTAATTCAATATCAGGTTCCATTCCAATGTCCCTAGGAAACCTGTCAAGCTTAGTAGAACTAGACATATCTGGTAATCAGTTTAAAGGAACTTTCATAGAAGTTATTGGGAAACTCAAATTGCTAGCATATCTGGATATATCTTATAATTCGTTTGAGGGTATGGTGTCGGAAGTTTCTTTTAGTAACCTTACAAAATTGAAGCATTTCATTGCAAAAGGAAACTCATTTACTCTGAACACCAGTCGAGATTGGCTTCATCCTTTTCAACTTGAAAGTTTACGATTGGATTCATGGCATCTGGGACCTGAATGGCCAATGTGGCTTCGGACACAAACACAGTTAACGGATCTAAGCTTATCTGGTACAGGAATTTCAAGTACTATTCCAACTTGGTTTTGGAACTTAACATTCCAATTAGGTTATCTAAATCTCTCTCACAATCAATTGTACGGGGAGATTCAAAATATAGTTGTTGCTCCTTATTCAGTAGTTGATCTTGGTTCTAACCAATTCACTGGTGCATTGCCTATTGTTCCCACCTCATTAGCTTGGCTAGATCTTTCCAATTCATCATTTTCTGGATCCGTTTTCCACTTCTTCTGTGATAGGCCGGAAGAAGCAAAGCAACTTTCTATTCTTCATCTCGGGAACAATCTTCTCACTGGAAAAGTACCCGACTGTTGGAGGAGTTGGCAATACTTGGCAGCCCTAAATTTAGAAAACAATCTTCTCACTGGAAATGTCCCAATGTCTATGAGATACTTGCAACAGTTGGAATCGCTGCACTTGCGCAATAATCACCTGTACGGAGAATTGCCACATTCCCTACAAAACTGTTCCTCGTTGTCAGTTGTTGACCTTGGTGGAAATGGGTTTGTCGGAAGCATACCAATATGGATGGGGAAAAGCCTTTCAAGGTTGAACGTTCTTAACCTTCGTTCGAATGAGTTTGAAGGAGACATTCCTTCTGAAATTTGTCATTTGAAAAATCTCCAGATATTGGACCTTGCACGTAATAAACTCTCTGGAACGATACCGAGATGCTTCCACAATTTGAGCGCCATGGCTACTTTGTCAGAATCATTTTCGTCAATCACGTTTATGATTAGTACTTCTGTTGAGGCTTCTGTAGTGGTAACGAAAGGGATAGAAGTGGAATATACCGAGATTCTGGGATTCGTAAAAGGCATGGATCTTTCATGCAACTTTATGTATGGAGAGATCCCTGAAGAACTTACCGACCTCCTCGCATTGCAGTCACTCAATTTATCGCATAACCGCTTCACCGGAAGAGTTCCTTCAAAGATTGGTAATATGGCAATGTTAGAATCTCTCGATTTTTCCATGAACCAACTTGACGGTGAAATTCCTCCAAGCATGACGAATTTGACATTTCTGAGTCACTTAAACTTGTCCTACAACAATTTGACGGGACGAATTCCGAAAAGCACTCAGCTGCAGAGCCTTGATCAGTCTAGCTTCGTCGGCAACGAACTATGCGGAGCTCCACTCAACAAGAATTGCAGCGCAAATGGGGTGATACCGCCACCAACAGTTGAGCAAGACGGAGGAGGAGGATACCGTTTACTCGAAGACGAGTGGTTCTACGTGAATTTGGCAGTTGGATTCTTCACGGGGTTTTGGATTGTGCTTGGTTCTTTGCTGGTAAACATGCCATGGAGCATTCTTCTTTCACAGTTGCAGAATAGGATGGTGCTTAAAATGTATCATGTAATTGTTAAATATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

975

Amino Acids

108.71

Weight (kDa)

5.49

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 79 6.3e-14 Leucine rich repeat N-terminal domain
LRR_14 PF23598 112 - 203 3.6e-06 Leucine-rich repeat region
LRR_8 PF13855 116 - 173 1.4e-07 Leucine rich repeat
LRR_14 PF23598 316 - 510 4e-13 Leucine-rich repeat region
LRR_8 PF13855 377 - 418 4.3e-06 Leucine rich repeat
LRR_8 PF13855 600 - 659 1.5e-06 Leucine rich repeat
LRR_14 PF23598 665 - 749 2.7e-06 Leucine-rich repeat region
LRR_8 PF13855 672 - 732 1.2e-06 Leucine rich repeat
LRR_8 PF13855 697 - 749 7.1e-06 Leucine rich repeat
LRR_14 PF23598 792 - 884 3.6e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1317
Acc16I TGCGCA 1 cut(s) 1964
AccB7I CCANNNNNTGG 2 cut(s) 836, 2173
AccI GTMKAC 1 cut(s) 496
AccIII TCCGGA 1 cut(s) 904
AciI CCGC 4 cut(s) 104, 2452, 2673, 2717
AclI AACGTT 1 cut(s) 2097
AclWI GGATC 8 cut(s) 896, 902, 915, 1527, 1749, 1762, 2373, 2389
AcoI YGGCCR 2 cut(s) 247, 1484
AcuI CTGAAG 3 cut(s) 527, 548, 2421
AfaI GTAC 9 cut(s) 385, 651, 675, 1537, 1552, 1622, 1845, 1979, 2284
AfiI CCNNNNNNNGG 3 cut(s) 836, 1854, 2173
AjnI CCWGG 2 cut(s) 717, 835
AjuI GAANNNNNNNTTGG 4 cut(s) 79, 111, 816, 848
AluBI AGCT 8 cut(s) 262, 1068, 1221, 1527, 1721, 2629, 2652, 2678
AluI AGCT 8 cut(s) 262, 1068, 1221, 1527, 1721, 2629, 2652, 2678
Alw21I GWGCWC 1 cut(s) 2680
Alw26I GTCTC 3 cut(s) 438, 809, 2124
AlwI GGATC 8 cut(s) 896, 902, 915, 1527, 1749, 1762, 2373, 2389
Ama87I CYCGRG 3 cut(s) 155, 1079, 1817
Aor13HI TCCGGA 1 cut(s) 904
AoxI GGCC 5 cut(s) 98, 247, 970, 1484, 1781
ApeKI GCWGC 5 cut(s) 262, 1877, 1954, 2629, 2697
ArsI GACNNNNNNTTYG 4 cut(s) 437, 469, 572, 604
AseI ATTAAT 1 cut(s) 894
Asp700I GAANNNNTTC 2 cut(s) 1034, 1376
AspA2I CCTAGG 1 cut(s) 1204
AspLEI GCGC 3 cut(s) 1965, 2234, 2702
AspS9I GGNCC 4 cut(s) 160, 827, 1475, 2176
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 5 cut(s) 1127, 1964, 2449, 2546, 2722
AsuII TTCGAA 1 cut(s) 2114
AsuNHI GCTAGC 1 cut(s) 1294
AvaI CYCGRG 3 cut(s) 155, 1079, 1817
AvaII GGWCC 4 cut(s) 160, 827, 1475, 2176
AvrII CCTAGG 1 cut(s) 1204
BalI TGGCCA 1 cut(s) 1486
BamHI GGATCC 2 cut(s) 907, 1754
BanII GRGCYC 1 cut(s) 2680
BauI CACGAG 1 cut(s) 257
BbsI GAAGAC 1 cut(s) 2772
Bbv12I GWGCWC 1 cut(s) 2680
BbvI GCAGC 5 cut(s) 249, 1889, 1941, 2616, 2709
BccI CCATC 4 cut(s) 452, 762, 2065, 2878
BcgI CGANNNNNNTGC 2 cut(s) 146, 180
BciT130I CCWGG 2 cut(s) 719, 837
BciVI GTATCC 1 cut(s) 2744
BclI TGATCA 2 cut(s) 235, 2641
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 3 cut(s) 438, 809, 2124
BfaI CTAG 9 cut(s) 399, 479, 791, 950, 1205, 1232, 1295, 1727, 2649
BfmI CTRYAG 2 cut(s) 2301, 2630
BfoI RGCGCY 1 cut(s) 2235
BfuI GTATCC 1 cut(s) 2744
BglI GCCNNNNNGGC 1 cut(s) 1492
BglII AGATCT 2 cut(s) 151, 1729
BisI GCNGC 5 cut(s) 263, 1878, 1955, 2630, 2698
BlnI CCTAGG 1 cut(s) 1204
BlsI GCNGC 5 cut(s) 264, 1879, 1956, 2631, 2699
BmcAI AGTACT 2 cut(s) 1552, 2284
Bme1390I CCNGG 3 cut(s) 93, 719, 837
Bme18I GGWCC 4 cut(s) 160, 827, 1475, 2176
BmeT110I CYCGRG 3 cut(s) 155, 1079, 1817
BmgT120I GGNCC 4 cut(s) 160, 827, 1475, 2176
BmiI GGNNCC 5 cut(s) 162, 909, 1189, 1476, 1756
BmrFI CCNGG 3 cut(s) 93, 719, 837
BmsI GCATC 5 cut(s) 355, 617, 750, 1477, 2204
BmtI GCTAGC 1 cut(s) 1298
BpiI GAAGAC 1 cut(s) 2772
BplI GAGNNNNNCTC 2 cut(s) 2667, 2699
BpmI CTGGAG 1 cut(s) 2150
Bpu14I TTCGAA 1 cut(s) 2114
BpuEI CTTGAG 2 cut(s) 385, 604
BpuMI CCSGG 1 cut(s) 93
BsaAI YACGTR 3 cut(s) 1112, 2186, 2782
BsaBI GATNNNNATC 1 cut(s) 906
BsaJI CCNNGG 6 cut(s) 717, 823, 1204, 2032, 2235, 2849
BsaWI WCCGGW 2 cut(s) 904, 2459
Bsc4I CCNNNNNNNGG 3 cut(s) 836, 1854, 2173
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 7 cut(s) 492, 620, 814, 1413, 1693, 1840, 1912
Bse3DI GCAATG 5 cut(s) 88, 1380, 1694, 2423, 2499
Bse8I GATNNNNATC 1 cut(s) 906
BseAI TCCGGA 1 cut(s) 904
BseBI CCWGG 2 cut(s) 719, 837
BseDI CCNNGG 6 cut(s) 717, 823, 1204, 2032, 2235, 2849
BseGI GGATG 4 cut(s) 682, 1429, 2076, 2889
BseJI GATNNNNATC 1 cut(s) 906
BseLI CCNNNNNNNGG 3 cut(s) 836, 1854, 2173
BseMI GCAATG 5 cut(s) 88, 1380, 1694, 2423, 2499
BseMII CTCAG 4 cut(s) 526, 1036, 2561, 2639
BseNI ACTGG 7 cut(s) 492, 620, 814, 1413, 1693, 1840, 1912
BseRI GAGGAG 4 cut(s) 1873, 2408, 2757, 2760
BseXI GCAGC 5 cut(s) 249, 1889, 1941, 2616, 2709
BsgI GTGCAG 2 cut(s) 248, 1940
BshFI GGCC 5 cut(s) 100, 249, 972, 1486, 1783
BsiHKAI GWGCWC 1 cut(s) 2680
BsiHKCI CYCGRG 3 cut(s) 155, 1079, 1817
BsiSI CCGG 5 cut(s) 93, 246, 905, 1784, 2460
BslFI GGGAC 4 cut(s) 1186, 1488, 1901, 2619
BslI CCNNNNNNNGG 3 cut(s) 836, 1854, 2173
BsmAI GTCTC 3 cut(s) 438, 809, 2124
BsmBI CGTCTC 1 cut(s) 809
BsmFI GGGAC 4 cut(s) 1186, 1488, 1901, 2619
BsmI GAATGC 1 cut(s) 2856
BsnI GGCC 5 cut(s) 100, 249, 972, 1486, 1783
BsoBI CYCGRG 3 cut(s) 155, 1079, 1817
Bsp119I TTCGAA 1 cut(s) 2114
Bsp1286I GDGCHC 1 cut(s) 2680
Bsp13I TCCGGA 1 cut(s) 904
Bsp19I CCATGG 2 cut(s) 2235, 2849
BspACI CCGC 4 cut(s) 104, 2452, 2673, 2717
BspANI GGCC 5 cut(s) 100, 249, 972, 1486, 1783
BspCNI CTCAG 4 cut(s) 525, 1035, 2562, 2638
BspEI TCCGGA 1 cut(s) 904
BspLI GGNNCC 5 cut(s) 162, 909, 1189, 1476, 1756
BspMAI CTGCAG 1 cut(s) 2634
BspOI GCTAGC 1 cut(s) 1298
BspPI GGATC 8 cut(s) 896, 902, 915, 1527, 1749, 1762, 2373, 2389
BspT104I TTCGAA 1 cut(s) 2114
BsrDI GCAATG 5 cut(s) 88, 1380, 1694, 2423, 2499
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 7 cut(s) 492, 620, 814, 1413, 1693, 1840, 1912
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 6 cut(s) 717, 823, 1204, 2032, 2235, 2849
BssSI CACGAG 1 cut(s) 257
BssT1I CCWWGG 5 cut(s) 823, 1204, 2032, 2235, 2849
Bst2BI CACGAG 1 cut(s) 257
Bst2UI CCWGG 2 cut(s) 719, 837
Bst6I CTCTTC 2 cut(s) 804, 2458
BstBAI YACGTR 3 cut(s) 1112, 2186, 2782
BstBI TTCGAA 1 cut(s) 2114
BstC8I GCNNGC 1 cut(s) 1296
BstDEI CTNAG 7 cut(s) 512, 599, 1022, 1222, 1523, 2570, 2625
BstDSI CCRYGG 2 cut(s) 2235, 2849
BstF5I GGATG 4 cut(s) 682, 1429, 2076, 2889
BstH2I RGCGCY 1 cut(s) 2235
BstHHI GCGC 3 cut(s) 1965, 2234, 2702
BstMAI GTCTC 3 cut(s) 438, 809, 2124
BstMWI GCNNNNNNNGC 4 cut(s) 117, 1492, 1960, 2658
BstNI CCWGG 2 cut(s) 719, 837
BstNSI RCATGY 2 cut(s) 637, 2848
BstSCI CCNGG 3 cut(s) 91, 717, 835
BstSFI CTRYAG 2 cut(s) 2301, 2630
BstV1I GCAGC 5 cut(s) 249, 1889, 1941, 2616, 2709
BstV2I GAAGAC 1 cut(s) 2772
BstX2I RGATCY 7 cut(s) 151, 907, 1519, 1729, 1754, 2365, 2394
BstXI CCANNNNNNTGG 1 cut(s) 1688
BstYI RGATCY 7 cut(s) 151, 907, 1519, 1729, 1754, 2365, 2394
BsuI GTATCC 1 cut(s) 2744
BsuRI GGCC 5 cut(s) 100, 249, 972, 1486, 1783
BtgI CCRYGG 2 cut(s) 2235, 2849
BtsCI GGATG 4 cut(s) 682, 1429, 2076, 2889
BtsIMutI CAGTG 5 cut(s) 551, 807, 1686, 1833, 1905
Cac8I GCNNGC 1 cut(s) 1296
CfoI GCGC 3 cut(s) 1965, 2234, 2702
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 4 cut(s) 160, 827, 1475, 2176
Csp6I GTAC 9 cut(s) 384, 650, 674, 1536, 1551, 1621, 1844, 1978, 2283
CviQI GTAC 9 cut(s) 384, 650, 674, 1536, 1551, 1621, 1844, 1978, 2283
DdeI CTNAG 7 cut(s) 512, 599, 1022, 1222, 1523, 2570, 2625
DraI TTTAAA 2 cut(s) 342, 1255
EaeI YGGCCR 2 cut(s) 247, 1484
Eam1104I CTCTTC 2 cut(s) 804, 2458
EarI CTCTTC 2 cut(s) 804, 2458
Ecl136II GAGCTC 1 cut(s) 2678
Eco130I CCWWGG 5 cut(s) 823, 1204, 2032, 2235, 2849
Eco24I GRGCYC 1 cut(s) 2680
Eco47I GGWCC 4 cut(s) 160, 827, 1475, 2176
Eco53kI GAGCTC 1 cut(s) 2678
Eco57I CTGAAG 3 cut(s) 527, 548, 2421
Eco88I CYCGRG 3 cut(s) 155, 1079, 1817
EcoICRI GAGCTC 1 cut(s) 2678
EcoO109I RGGNCCY 2 cut(s) 160, 1475
EcoRI GAATTC 1 cut(s) 2610
EcoRII CCWGG 2 cut(s) 717, 835
EcoT14I CCWWGG 5 cut(s) 823, 1204, 2032, 2235, 2849
EcoT38I GRGCYC 1 cut(s) 2680
ErhI CCWWGG 5 cut(s) 823, 1204, 2032, 2235, 2849
Esp3I CGTCTC 1 cut(s) 809
FalI AAGNNNNNCTT 2 cut(s) 2455, 2487
FaqI GGGAC 4 cut(s) 1186, 1488, 1901, 2619
FbaI TGATCA 2 cut(s) 235, 2641
FblI GTMKAC 1 cut(s) 496
Fnu4HI GCNGC 5 cut(s) 263, 1878, 1955, 2630, 2698
FokI GGATG 4 cut(s) 669, 1416, 2083, 2896
FriOI GRGCYC 1 cut(s) 2680
Fsp4HI GCNGC 5 cut(s) 263, 1878, 1955, 2630, 2698
FspBI CTAG 9 cut(s) 399, 479, 791, 950, 1205, 1232, 1295, 1727, 2649
FspI TGCGCA 1 cut(s) 1964
GlaI GCGC 3 cut(s) 1964, 2233, 2701
GluI GCNGC 5 cut(s) 263, 1878, 1955, 2630, 2698
GsuI CTGGAG 1 cut(s) 2150
HaeII RGCGCY 1 cut(s) 2235
HaeIII GGCC 5 cut(s) 100, 249, 972, 1486, 1783
HapII CCGG 5 cut(s) 93, 246, 905, 1784, 2460
HhaI GCGC 3 cut(s) 1965, 2234, 2702
Hin6I GCGC 3 cut(s) 1963, 2232, 2700
HinP1I GCGC 3 cut(s) 1963, 2232, 2700
HincII GTYRAC 2 cut(s) 1515, 2029
HindII GTYRAC 2 cut(s) 1515, 2029
HindIII AAGCTT 2 cut(s) 1219, 1525
HpaI GTTAAC 1 cut(s) 1515
HpaII CCGG 5 cut(s) 93, 246, 905, 1784, 2460
HphI GGTGA 5 cut(s) 1127, 1964, 2449, 2546, 2722
Hpy166II GTNNAC 7 cut(s) 497, 674, 1451, 1515, 2029, 2759, 2842
Hpy8I GTNNAC 7 cut(s) 497, 674, 1451, 1515, 2029, 2759, 2842
Hpy99I CGWCG 1 cut(s) 2660
HpyAV CCTTC 8 cut(s) 191, 316, 523, 551, 2117, 2120, 2148, 2481
HpyCH4IV ACGT 5 cut(s) 1111, 2097, 2185, 2270, 2781
HpyF10VI GCNNNNNNNGC 4 cut(s) 117, 1492, 1960, 2658
HpyF3I CTNAG 7 cut(s) 512, 599, 1022, 1222, 1523, 2570, 2625
HpySE526I ACGT 5 cut(s) 1111, 2097, 2185, 2270, 2781
HspAI GCGC 3 cut(s) 1963, 2232, 2700
Kpn2I TCCGGA 1 cut(s) 904
Ksp22I TGATCA 2 cut(s) 235, 2641
KspAI GTTAAC 1 cut(s) 1515
LmnI GCTCC 4 cut(s) 1654, 2675, 2683, 2853
Lsp1109I GCAGC 5 cut(s) 249, 1889, 1941, 2616, 2709
LweI GCATC 5 cut(s) 355, 617, 750, 1477, 2204
MaeI CTAG 9 cut(s) 399, 479, 791, 950, 1205, 1232, 1295, 1727, 2649
MaeII ACGT 5 cut(s) 1111, 2097, 2185, 2270, 2781
MaeIII GTNAC 7 cut(s) 368, 518, 625, 1355, 2308, 2430, 2573
MfeI CAATTG 1 cut(s) 1616
MflI RGATCY 7 cut(s) 151, 907, 1519, 1729, 1754, 2365, 2394
MhlI GDGCHC 1 cut(s) 2680
MlsI TGGCCA 1 cut(s) 1486
MluNI TGGCCA 1 cut(s) 1486
MlyI GAGTC 4 cut(s) 275, 440, 1091, 2581
MmeI TCCRAC 9 cut(s) 197, 303, 558, 1320, 1583, 1835, 1926, 2032, 2776
Mox20I TGGCCA 1 cut(s) 1486
MroI TCCGGA 1 cut(s) 904
MroXI GAANNNNTTC 2 cut(s) 1034, 1376
MscI TGGCCA 1 cut(s) 1486
MslI CAYNNNNRTG 2 cut(s) 1196, 2273
Msp20I TGGCCA 1 cut(s) 1486
MspA1I CMGCKG 1 cut(s) 2629
MspI CCGG 5 cut(s) 93, 246, 905, 1784, 2460
MspR9I CCNGG 3 cut(s) 93, 719, 837
MunI CAATTG 1 cut(s) 1616
Mva1269I GAATGC 1 cut(s) 2856
MvaI CCWGG 2 cut(s) 719, 837
MwoI GCNNNNNNNGC 4 cut(s) 117, 1492, 1960, 2658
NciI CCSGG 1 cut(s) 93
NcoI CCATGG 2 cut(s) 2235, 2849
NheI GCTAGC 1 cut(s) 1294
NlaIV GGNNCC 5 cut(s) 162, 909, 1189, 1476, 1756
NmeAIII GCCGAG 1 cut(s) 789
NmuCI GTSAC 2 cut(s) 2430, 2573
NsbI TGCGCA 1 cut(s) 1964
NspI RCATGY 2 cut(s) 637, 2848
NspV TTCGAA 1 cut(s) 2114
PaeR7I CTCGAG 2 cut(s) 155, 1079
PcsI WCGNNNNNNNCGW 2 cut(s) 2267, 2661
PctI GAATGC 1 cut(s) 2856
PdmI GAANNNNTTC 2 cut(s) 1034, 1376
PfeI GAWTC 9 cut(s) 946, 1460, 1630, 1949, 2252, 2341, 2349, 2501, 2799
PflMI CCANNNNNTGG 2 cut(s) 836, 2173
PkrI GCNGC 5 cut(s) 264, 1879, 1956, 2631, 2699
PleI GAGTC 4 cut(s) 275, 440, 1090, 2580
PpsI GAGTC 4 cut(s) 275, 440, 1090, 2580
Ppu21I YACGTR 3 cut(s) 1112, 2186, 2782
PpuMI RGGWCCY 2 cut(s) 160, 1475
PshBI ATTAAT 1 cut(s) 894
PsiI TTATAA 1 cut(s) 1317
Psp124BI GAGCTC 1 cut(s) 2680
Psp1406I AACGTT 1 cut(s) 2097
Psp5II RGGWCCY 2 cut(s) 160, 1475
Psp6I CCWGG 2 cut(s) 717, 835
PspGI CCWGG 2 cut(s) 717, 835
PspN4I GGNNCC 5 cut(s) 162, 909, 1189, 1476, 1756
PspPI GGNCC 4 cut(s) 160, 827, 1475, 2176
PspPPI RGGWCCY 2 cut(s) 160, 1475
PstI CTGCAG 1 cut(s) 2634
PsuI RGATCY 7 cut(s) 151, 907, 1519, 1729, 1754, 2365, 2394
PvuII CAGCTG 1 cut(s) 2629
RsaI GTAC 9 cut(s) 385, 651, 675, 1537, 1552, 1622, 1845, 1979, 2284
RsaNI GTAC 9 cut(s) 384, 650, 674, 1536, 1551, 1621, 1844, 1978, 2283
RseI CAYNNNNRTG 2 cut(s) 1196, 2273
SacI GAGCTC 1 cut(s) 2680
SatI GCNGC 5 cut(s) 263, 1878, 1955, 2630, 2698
Sau96I GGNCC 4 cut(s) 160, 827, 1475, 2176
ScaI AGTACT 2 cut(s) 1552, 2284
SchI GAGTC 4 cut(s) 275, 440, 1091, 2581
ScrFI CCNGG 3 cut(s) 93, 719, 837
SduI GDGCHC 1 cut(s) 2680
SfaNI GCATC 5 cut(s) 355, 617, 750, 1477, 2204
SfcI CTRYAG 2 cut(s) 2301, 2630
Sfr274I CTCGAG 2 cut(s) 155, 1079
SfuI TTCGAA 1 cut(s) 2114
SinI GGWCC 4 cut(s) 160, 827, 1475, 2176
SlaI CTCGAG 2 cut(s) 155, 1079
SmiMI CAYNNNNRTG 2 cut(s) 1196, 2273
SmlI CTYRAG 4 cut(s) 155, 364, 583, 1079
SmoI CTYRAG 4 cut(s) 155, 364, 583, 1079
SsiI CCGC 4 cut(s) 104, 2452, 2673, 2717
SspI AATATT 1 cut(s) 781
SspMI CTAG 9 cut(s) 399, 479, 791, 950, 1205, 1232, 1295, 1727, 2649
SstI GAGCTC 1 cut(s) 2680
StyD4I CCNGG 3 cut(s) 91, 717, 835
StyI CCWWGG 5 cut(s) 823, 1204, 2032, 2235, 2849
TaiI ACGT 5 cut(s) 1114, 2100, 2188, 2273, 2784
TaqI TCGA 8 cut(s) 156, 172, 1080, 1124, 1417, 2114, 2508, 2763
TatI WGTACW 4 cut(s) 383, 673, 1550, 2282
TfiI GAWTC 9 cut(s) 946, 1460, 1630, 1949, 2252, 2341, 2349, 2501, 2799
TscAI CASTG 5 cut(s) 551, 814, 1693, 1840, 1912
TseFI GTSAC 2 cut(s) 2430, 2573
TseI GCWGC 5 cut(s) 262, 1877, 1954, 2629, 2697
Tsp45I GTSAC 2 cut(s) 2430, 2573
TspDTI ATGAA 9 cut(s) 668, 1255, 1369, 1418, 1452, 1731, 1802, 2361, 2534
TspGWI ACGGA 4 cut(s) 1532, 1747, 1995, 2754
TspRI CASTG 5 cut(s) 551, 814, 1693, 1840, 1912
Van91I CCANNNNNTGG 2 cut(s) 836, 2173
VpaK11BI GGWCC 4 cut(s) 160, 827, 1475, 2176
VspI ATTAAT 1 cut(s) 894
XbaI TCTAGA 1 cut(s) 949
XceI RCATGY 2 cut(s) 637, 2848
XcmI CCANNNNNNNNNTGG 1 cut(s) 1566
XhoI CTCGAG 2 cut(s) 155, 1079
XmaJI CCTAGG 1 cut(s) 1204
XmiI GTMKAC 1 cut(s) 496
XmnI GAANNNNTTC 2 cut(s) 1034, 1376
XspI CTAG 9 cut(s) 399, 479, 791, 950, 1205, 1232, 1295, 1727, 2649
ZrmI AGTACT 2 cut(s) 1552, 2284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.