Rmu_sc0000170.1_g000009

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000170.1
Physical Location & Seq
Reverse (-)
39799 .. 43709
3911 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000170.1_g000009.1.cds

Sequence Viewer

Length: 3312 bp
atgggtaggatcatgggagcgaccttacttctctggtttctaatcactgcaaccactagcattagcttgtgtaatgggaaccctggtgtggcttgcaaagaaagtgaaagactagcacttctgatgttgaagcaagattttactgatccttcaaatcggcttttgtcatgggcaggtgaaggagactgttgccattggactggagttgtctgtgataatgtaaccggtcacatacgcgagctccaccttggaaattactctaatctcaactctttctcttacttgggaggtaagataaatccttctctgctcaatttaacgcaactaacctacttggacctgagtaacaactttttccaaggaatgcagatccctagcttctttggttctcttaatagtttaactcatcttgacctttcaagaagcttcgaaggaatggttcctcctcaactggggaatctctcgaatctacgtgatctacgtctcagtggttatggtttgaaggctgagaaccttcaatggatttctggtctttctcagttggaacacctggacgcgagttttcttgatcttagcaaagtatctgatgattggctgccagtgatagagatgcggctcccctctttggtagagttgcatatgtcagcttgcagtctccattacattccccatttaactatcatcaattttacttcacttgccatcctcgatctttctttcaacagctttaattctttcatgcctaagtgggttttcagtttcagaaatctggtgtctctttctcttagagattgtggtttccaaggtccaattcctagcagtaggagcccacacaatatcacatctctcagggagattgatctctcaattaatcaccttagggatccgataccgaaatggctgctcaacaacaaagaccttactgtacttgatctaggatacaattcttatacaggaccaattccaggtggcattgtgaatatgactagtcttaaggatcttcatctcgagtctaattctttcatctctaccatagctgaatggttgtctagttttaataatcttgaatccttggatatttctagcaatcacttgcatggtgaaattttgagttccattggaaacttgacatccattgtacatcttggtttaggttttaatcagtttgaagggacaatcccaaactccttgggcaatctgtcttccttagagtcattacagatttcatacaattcgtttcatggaactcttccagagaccattggccaactcaaaaggctaacagctttggatatatcttttaattcatttgaaggtgtagtgtctgaagttcattttacacatcttacaagtttaaaatccttcagagcacatggaaactcattgactctaaaaactagtcgagactggcttcctccttttcaacttcaaagcttgtatttagattcttggcatttggggcttgaactgccttcatggcttcgaacacaaacacaattgctggagctaagcctattgggtacaggaatttcaggtaccattccgaattggtgttggaacttttcttccgcactagttttcctggatctgtccaacaatcaattacatggggagattcaatatataaatgttggcgccccattctcaataattgacctaagttcaaaccagttcaacggttcattgcctcttgtctcctccactatagaactactggatctttcgaattcttcattttctggatctctgttccacttcttttgtgataggatggacataccaaaaaagctctattttcttcatctagggaacaatcatctcagtggtgaaattcctgattgttggatgaattggcttaatttgcaagccataacattaggtaacaacaatttgactggaaaaattccaagctccattggacacttgcacattctggaatcattgcacttgcgcaacaatcacctttctggagaactacctcaatccttgcagaactgtacacaattgttagtagttgaccttggtaaaaataagctctctggaggcttgcctatatggatggggaaaagctttccaaacttggtggttcttagccttcggtcaaatatgtttcaaggagtcatttcggatcaactttgtaatataagccgtctccaaatcttggacttggcagataatgtcctctcaggaacaataccgagatgcttcggcaactttagtggaattgcaaactcgtcaatgtcagatgctttcgctacttatgttggtaactacagactgtacagagataatacgttcctggtgcaaaaagggagagaagtggaattcggcaaaattcttggaattgtagcaagcatagatctttctaacaacaacttatctggggatattcctgaggaactgacaaatctcctcagtttgcaaacattgaatttatcagcaaatcttttgaccggaggaatcccttcgatgatcggcagattgaggcagttagaatcacttgatttgtctacaaaccaactttctggtgaaattcctccaagcataactaatttgacgtttctgagtcacttgaacttgtctcacaacagtctgacaggacagattccacaaagcactcagcttctgagtcttgatgagtccagctttgtcggcaatgagctttgcggacctccactcagcaagaattgcagtgcaaacaaggcgatgccaccaacacttgatcagcaagacaaaggatatgatttactggaagatgagtggttctacctgagcttgggattgggattcatggttgccttcaaaccccagaaaccaccgccgcccaccttgaagatctcaactccaggagtccagaaccggcggccccgcccccagaaccgaccggaaaatatccgaaccggccaccggaatcttcatgacctgaaccggcagaaaagagaaaaaaaaaagaaaaaagaggaggaagccacagcccaagtccacctgctgcagcccaagtccacttgctgcagcccaatagttgagcccacgtgcagcaggccccagccaagccgccaaacccatctgccatgtcagcacatcaggtcaacccaccggtcaacactttccggtgacttttccggccactttccggccacttttcctgccaacttccggcgattttttccggtcagctacagtattttacggcagctacagtacttcccggcgaccacttttccggccatctttcagggggagaccaaaagccgaactgtgggggttcgtgctcactccaagcttggagcttgtagagtcctccaaacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1103

Amino Acids

122.47

Weight (kDa)

6.61

Isoelectric Point (pI)

40.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 164, 2994
Acc16I TGCGCA 1 cut(s) 1952
Acc36I ACCTGC 2 cut(s) 164, 2994
Acc65I GGTACC 1 cut(s) 1535
AccB1I GGYRCC 2 cut(s) 1535, 1634
AccB7I CCANNNNNTGG 1 cut(s) 2161
AccI GTMKAC 1 cut(s) 2510
AccII CGCG 2 cut(s) 237, 557
AciI CCGC 8 cut(s) 613, 1569, 2667, 2819, 2822, 2863, 2869, 3055
AcoI YGGCCR 5 cut(s) 1264, 2902, 3124, 3135, 3225
AcsI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 1902, 2324, 2334, 2431, 2532
AcuI CTGAAG 2 cut(s) 1347, 1348
AcvI CACGTG 1 cut(s) 3033
AcyI GRCGYC 1 cut(s) 1635
AfaI GTAC 7 cut(s) 927, 1140, 1522, 1537, 1999, 2282, 3203
AflII CTTAAG 1 cut(s) 992
AgeI ACCGGT 2 cut(s) 224, 3096
AhlI ACTAGT 3 cut(s) 986, 1397, 1573
AjnI CCWGG 6 cut(s) 82, 549, 964, 1581, 2298, 2845
AjuI GAANNNNNNNTTGG 2 cut(s) 795, 827
AloI GAACNNNNNNTCC 2 cut(s) 1550, 1582
Alw21I GWGCWC 3 cut(s) 243, 1372, 3274
AlwNI CAGNNNCTG 1 cut(s) 2626
Ama87I CYCGRG 1 cut(s) 1007
AoxI GGCC 7 cut(s) 1264, 2864, 2902, 3041, 3124, 3135, 3225
ApeKI GCWGC 8 cut(s) 595, 901, 2989, 2992, 3009, 3012, 3036, 3193
ApoI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 1902, 2324, 2334, 2431, 2532
AseI ATTAAT 1 cut(s) 870
AsiGI ACCGGT 2 cut(s) 224, 3096
Asp700I GAANNNNTTC 1 cut(s) 2464
Asp718I GGTACC 1 cut(s) 1535
AspLEI GCGC 2 cut(s) 1637, 1953
AspS9I GGNCC 6 cut(s) 337, 806, 956, 2669, 2865, 3042
AsuC2I CCSGG 1 cut(s) 3209
AsuHPI GGTGA 7 cut(s) 188, 866, 1112, 1838, 1952, 2540, 3125
AsuII TTCGAA 3 cut(s) 429, 1483, 1724
AvaI CYCGRG 1 cut(s) 1007
AvaII GGWCC 4 cut(s) 337, 806, 956, 2669
AxyI CCTNAGG 2 cut(s) 878, 2394
BalI TGGCCA 1 cut(s) 1266
BamHI GGATCC 1 cut(s) 883
BanI GGYRCC 2 cut(s) 1535, 1634
BanII GRGCYC 3 cut(s) 243, 830, 3030
BbrPI CACGTG 1 cut(s) 3033
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 3 cut(s) 243, 1372, 3274
BbvI GCAGC 8 cut(s) 582, 888, 2976, 2996, 3004, 3024, 3048, 3205
BccI CCATC 5 cut(s) 710, 1765, 2053, 3072, 3236
BceAI ACGGC 2 cut(s) 2133, 3206
BcgI CGANNNNNNTGC 2 cut(s) 883, 917
BciT130I CCWGG 6 cut(s) 84, 551, 966, 1583, 2300, 2847
BciVI GTATCC 1 cut(s) 932
BclI TGATCA 1 cut(s) 2722
BcnI CCSGG 1 cut(s) 3209
BcuI ACTAGT 3 cut(s) 986, 1397, 1573
BfmI CTRYAG 6 cut(s) 1704, 2272, 2990, 3010, 3178, 3197
BfoI RGCGCY 1 cut(s) 1638
BfrI CTTAAG 1 cut(s) 992
BfuAI ACCTGC 2 cut(s) 164, 2994
BfuI GTATCC 1 cut(s) 932
BglI GCCNNNNNGGC 1 cut(s) 1477
BglII AGATCT 2 cut(s) 2359, 2835
BlpI GCTNAGC 1 cut(s) 1508
BmcAI AGTACT 1 cut(s) 3203
Bme1390I CCNGG 7 cut(s) 84, 551, 966, 1583, 2300, 2847, 3209
Bme18I GGWCC 4 cut(s) 337, 806, 956, 2669
BmeT110I CYCGRG 1 cut(s) 1007
BmgT120I GGNCC 6 cut(s) 337, 806, 956, 2669, 2865, 3042
BmiI GGNNCC 9 cut(s) 80, 441, 617, 827, 885, 1537, 1636, 2867, 3044
BmrFI CCNGG 7 cut(s) 84, 551, 966, 1583, 2300, 2847, 3209
BmrI ACTGGG 1 cut(s) 461
BmsI GCATC 4 cut(s) 600, 2192, 2236, 2697
BmuI ACTGGG 1 cut(s) 461
BpiI GAAGAC 1 cut(s) 1194
BpmI CTGGAG 5 cut(s) 222, 1523, 1989, 2061, 2829
Bpu10I CCTNAGC 1 cut(s) 2771
Bpu1102I GCTNAGC 1 cut(s) 1508
Bpu14I TTCGAA 3 cut(s) 429, 1483, 1724
BpuMI CCSGG 1 cut(s) 3209
BsaAI YACGTR 2 cut(s) 473, 3033
BsaBI GATNNNNATC 1 cut(s) 1002
BsaHI GRCGYC 1 cut(s) 1635
BsaI GGTCTC 2 cut(s) 1250, 3236
BsaJI CCNNGG 7 cut(s) 82, 247, 358, 802, 1071, 1188, 2020
BsaWI WCCGGW 7 cut(s) 224, 2453, 2884, 2907, 3096, 3110, 3169
BsaXI ACNNNNNCTCC 2 cut(s) 225, 255
Bse118I RCCGGY 5 cut(s) 224, 2859, 2900, 2928, 3096
Bse1I ACTGG 8 cut(s) 205, 456, 599, 1412, 1669, 1719, 1900, 2754
Bse21I CCTNAGG 2 cut(s) 878, 2394
Bse3DI GCAATG 3 cut(s) 1682, 1940, 2662
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 6 cut(s) 84, 551, 966, 1583, 2300, 2847
BseDI CCNNGG 7 cut(s) 82, 247, 358, 802, 1071, 1188, 2020
BseGI GGATG 5 cut(s) 702, 1130, 1776, 1851, 2064
BseJI GATNNNNATC 1 cut(s) 1002
BseMI GCAATG 3 cut(s) 1682, 1940, 2662
BseNI ACTGG 8 cut(s) 205, 456, 599, 1412, 1669, 1719, 1900, 2754
BseRI GAGGAG 4 cut(s) 435, 1687, 2402, 2975
BseXI GCAGC 8 cut(s) 582, 888, 2976, 2996, 3004, 3024, 3048, 3205
BseYI CCCAGC 1 cut(s) 3045
BsgI GTGCAG 1 cut(s) 3055
Bsh1236I CGCG 2 cut(s) 237, 557
Bsh1285I CGRYCG 1 cut(s) 2885
BshFI GGCC 7 cut(s) 1266, 2866, 2904, 3043, 3126, 3137, 3227
BshNI GGYRCC 2 cut(s) 1535, 1634
BshTI ACCGGT 2 cut(s) 224, 3096
BsiEI CGRYCG 1 cut(s) 2885
BsiHKAI GWGCWC 3 cut(s) 243, 1372, 3274
BsiHKCI CYCGRG 1 cut(s) 1007
BslFI GGGAC 1 cut(s) 1186
BsmBI CGTCTC 2 cut(s) 488, 2156
BsmFI GGGAC 1 cut(s) 1186
BsmI GAATGC 1 cut(s) 369
BsnI GGCC 7 cut(s) 1266, 2866, 2904, 3043, 3126, 3137, 3227
Bso31I GGTCTC 2 cut(s) 1250, 3236
BsoBI CYCGRG 1 cut(s) 1007
Bsp119I TTCGAA 3 cut(s) 429, 1483, 1724
Bsp1286I GDGCHC 5 cut(s) 243, 830, 1372, 3030, 3274
Bsp1407I TGTACA 3 cut(s) 1138, 1997, 2280
Bsp1720I GCTNAGC 1 cut(s) 1508
BspACI CCGC 8 cut(s) 613, 1569, 2667, 2819, 2822, 2863, 2869, 3055
BspANI GGCC 7 cut(s) 1266, 2866, 2904, 3043, 3126, 3137, 3227
BspFNI CGCG 2 cut(s) 237, 557
BspHI TCATGA 1 cut(s) 2917
BspLI GGNNCC 9 cut(s) 80, 441, 617, 827, 885, 1537, 1636, 2867, 3044
BspMAI CTGCAG 2 cut(s) 2994, 3014
BspMI ACCTGC 2 cut(s) 164, 2994
BspT104I TTCGAA 3 cut(s) 429, 1483, 1724
BspT107I GGYRCC 2 cut(s) 1535, 1634
BspTI CTTAAG 1 cut(s) 992
BspTNI GGTCTC 2 cut(s) 1250, 3236
BsrDI GCAATG 3 cut(s) 1682, 1940, 2662
BsrFI RCCGGY 5 cut(s) 224, 2859, 2900, 2928, 3096
BsrGI TGTACA 3 cut(s) 1138, 1997, 2280
BsrI ACTGG 8 cut(s) 205, 456, 599, 1412, 1669, 1719, 1900, 2754
BssAI RCCGGY 5 cut(s) 224, 2859, 2900, 2928, 3096
BssECI CCNNGG 7 cut(s) 82, 247, 358, 802, 1071, 1188, 2020
BssNI GRCGYC 1 cut(s) 1635
BssT1I CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2020
Bst2UI CCWGG 6 cut(s) 84, 551, 966, 1583, 2300, 2847
Bst4CI ACNGT 9 cut(s) 188, 925, 1679, 1997, 2280, 2591, 3182, 3201, 3259
Bst6I CTCTTC 1 cut(s) 1254
BstACI GRCGYC 1 cut(s) 1635
BstAFI CTTAAG 1 cut(s) 992
BstAPI GCANNNNNTGC 1 cut(s) 2688
BstAUI TGTACA 3 cut(s) 1138, 1997, 2280
BstBAI YACGTR 2 cut(s) 473, 3033
BstBI TTCGAA 3 cut(s) 429, 1483, 1724
BstC8I GCNNGC 7 cut(s) 94, 239, 649, 1866, 2048, 2353, 3041
BstF5I GGATG 5 cut(s) 702, 1130, 1776, 1851, 2064
BstFNI CGCG 2 cut(s) 237, 557
BstH2I RGCGCY 1 cut(s) 1638
BstHHI GCGC 2 cut(s) 1637, 1953
BstMCI CGRYCG 1 cut(s) 2885
BstMWI GCNNNNNNNGC 9 cut(s) 825, 1459, 1468, 1477, 1861, 2652, 2688, 2702, 3076
BstNI CCWGG 6 cut(s) 84, 551, 966, 1583, 2300, 2847
BstSCI CCNGG 7 cut(s) 82, 549, 964, 1581, 2298, 2845, 3207
BstSFI CTRYAG 6 cut(s) 1704, 2272, 2990, 3010, 3178, 3197
BstUI CGCG 2 cut(s) 237, 557
BstV1I GCAGC 8 cut(s) 582, 888, 2976, 2996, 3004, 3024, 3048, 3205
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 8 cut(s) 369, 883, 997, 1585, 1717, 1742, 2359, 2835
BstXI CCANNNNNNTGG 2 cut(s) 200, 2525
BstYI RGATCY 8 cut(s) 369, 883, 997, 1585, 1717, 1742, 2359, 2835
Bsu36I CCTNAGG 2 cut(s) 878, 2394
BsuI GTATCC 1 cut(s) 932
BsuRI GGCC 7 cut(s) 1266, 2866, 2904, 3043, 3126, 3137, 3227
BtgZI GCGATG 1 cut(s) 2720
BtsCI GGATG 5 cut(s) 702, 1130, 1776, 1851, 2064
BtsI GCAGTG 2 cut(s) 45, 2698
BtsIMutI CAGTG 5 cut(s) 45, 493, 606, 1828, 2698
BveI ACCTGC 2 cut(s) 164, 2994
Cac8I GCNNGC 7 cut(s) 94, 239, 649, 1866, 2048, 2353, 3041
CaiI CAGNNNCTG 1 cut(s) 2626
CciI TCATGA 1 cut(s) 2917
CfoI GCGC 2 cut(s) 1637, 1953
Cfr10I RCCGGY 5 cut(s) 224, 2859, 2900, 2928, 3096
Cfr13I GGNCC 6 cut(s) 337, 806, 956, 2669, 2865, 3042
CseI GACGC 1 cut(s) 563
Csp6I GTAC 7 cut(s) 926, 1139, 1521, 1536, 1998, 2281, 3202
CspAI ACCGGT 2 cut(s) 224, 3096
CspCI CAANNNNNGTGG 6 cut(s) 1742, 1777, 2064, 2099, 2200, 2235
CviQI GTAC 7 cut(s) 926, 1139, 1521, 1536, 1998, 2281, 3202
DinI GGCGCC 1 cut(s) 1636
DraI TTTAAA 1 cut(s) 1356
EaeI YGGCCR 5 cut(s) 1264, 2902, 3124, 3135, 3225
Eam1104I CTCTTC 1 cut(s) 1254
EarI CTCTTC 1 cut(s) 1254
Ecl136II GAGCTC 1 cut(s) 241
Eco130I CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2020
Eco24I GRGCYC 3 cut(s) 243, 830, 3030
Eco31I GGTCTC 2 cut(s) 1250, 3236
Eco47I GGWCC 4 cut(s) 337, 806, 956, 2669
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 2 cut(s) 1347, 1348
Eco72I CACGTG 1 cut(s) 3033
Eco81I CCTNAGG 2 cut(s) 878, 2394
Eco88I CYCGRG 1 cut(s) 1007
EcoICRI GAGCTC 1 cut(s) 241
EcoO109I RGGNCCY 1 cut(s) 3042
EcoRI GAATTC 2 cut(s) 1726, 2324
EcoRII CCWGG 6 cut(s) 82, 549, 964, 1581, 2298, 2845
EcoT14I CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2020
EcoT38I GRGCYC 3 cut(s) 243, 830, 3030
EgeI GGCGCC 1 cut(s) 1636
EheI GGCGCC 1 cut(s) 1636
ErhI CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2020
Esp3I CGTCTC 2 cut(s) 488, 2156
FaqI GGGAC 1 cut(s) 1186
FauI CCCGC 1 cut(s) 2876
FauNDI CATATG 1 cut(s) 639
FbaI TGATCA 1 cut(s) 2722
FblI GTMKAC 1 cut(s) 2510
FokI GGATG 5 cut(s) 689, 1117, 1783, 1858, 2071
FriOI GRGCYC 3 cut(s) 243, 830, 3030
FspI TGCGCA 1 cut(s) 1952
GlaI GCGC 2 cut(s) 1636, 1952
GsaI CCCAGC 1 cut(s) 3049
GsuI CTGGAG 5 cut(s) 222, 1523, 1989, 2061, 2829
HaeII RGCGCY 1 cut(s) 1638
HaeIII GGCC 7 cut(s) 1266, 2866, 2904, 3043, 3126, 3137, 3227
HgaI GACGC 1 cut(s) 563
HhaI GCGC 2 cut(s) 1637, 1953
Hin1I GRCGYC 1 cut(s) 1635
Hin6I GCGC 2 cut(s) 1635, 1951
HinP1I GCGC 2 cut(s) 1635, 1951
HincII GTYRAC 3 cut(s) 2017, 3090, 3102
HindII GTYRAC 3 cut(s) 2017, 3090, 3102
HindIII AAGCTT 4 cut(s) 424, 1432, 2068, 3281
HphI GGTGA 7 cut(s) 188, 866, 1112, 1838, 1952, 2540, 3125
Hpy166II GTNNAC 7 cut(s) 2000, 2017, 2511, 2983, 3003, 3090, 3102
Hpy8I GTNNAC 7 cut(s) 2000, 2017, 2511, 2983, 3003, 3090, 3102
HpyCH4III ACNGT 9 cut(s) 188, 925, 1679, 1997, 2280, 2591, 3182, 3201, 3259
HpyCH4IV ACGT 5 cut(s) 472, 481, 2294, 2558, 3032
HpyF10VI GCNNNNNNNGC 9 cut(s) 825, 1459, 1468, 1477, 1861, 2652, 2688, 2702, 3076
HpySE526I ACGT 5 cut(s) 472, 481, 2294, 2558, 3032
Hsp92I GRCGYC 1 cut(s) 1635
HspAI GCGC 2 cut(s) 1635, 1951
KasI GGCGCC 1 cut(s) 1634
KpnI GGTACC 1 cut(s) 1539
Ksp22I TGATCA 1 cut(s) 2722
LmnI GCTCC 7 cut(s) 17, 246, 621, 825, 1504, 1916, 3287
Lsp1109I GCAGC 8 cut(s) 582, 888, 2976, 2996, 3004, 3024, 3048, 3205
LweI GCATC 4 cut(s) 600, 2192, 2236, 2697
MaeII ACGT 5 cut(s) 472, 481, 2294, 2558, 3032
MaeIII GTNAC 7 cut(s) 220, 227, 344, 1880, 2267, 2567, 3113
MboII GAAGA 9 cut(s) 992, 1194, 1241, 1557, 1722, 1790, 2765, 2845, 2906
MfeI CAATTG 2 cut(s) 1496, 2003
MflI RGATCY 8 cut(s) 369, 883, 997, 1585, 1717, 1742, 2359, 2835
MhlI GDGCHC 5 cut(s) 243, 830, 1372, 3030, 3274
MlsI TGGCCA 1 cut(s) 1266
MluNI TGGCCA 1 cut(s) 1266
Mly113I GGCGCC 1 cut(s) 1635
MlyI GAGTC 9 cut(s) 1019, 1220, 1381, 2127, 2575, 2638, 2648, 2859, 3306
MmeI TCCRAC 4 cut(s) 522, 1535, 1617, 1823
Mox20I TGGCCA 1 cut(s) 1266
MroXI GAANNNNTTC 1 cut(s) 2464
MscI TGGCCA 1 cut(s) 1266
MslI CAYNNNNRTG 2 cut(s) 1095, 1821
Msp20I TGGCCA 1 cut(s) 1266
MspCI CTTAAG 1 cut(s) 992
MspR9I CCNGG 7 cut(s) 84, 551, 966, 1583, 2300, 2847, 3209
MunI CAATTG 2 cut(s) 1496, 2003
Mva1269I GAATGC 1 cut(s) 369
MvaI CCWGG 6 cut(s) 84, 551, 966, 1583, 2300, 2847
MvnI CGCG 2 cut(s) 237, 557
MwoI GCNNNNNNNGC 9 cut(s) 825, 1459, 1468, 1477, 1861, 2652, 2688, 2702, 3076
NarI GGCGCC 1 cut(s) 1635
NciI CCSGG 1 cut(s) 3209
NdeI CATATG 1 cut(s) 639
NlaIV GGNNCC 9 cut(s) 80, 441, 617, 827, 885, 1537, 1636, 2867, 3044
NmuCI GTSAC 3 cut(s) 227, 2567, 3113
NsbI TGCGCA 1 cut(s) 1952
NspV TTCGAA 3 cut(s) 429, 1483, 1724
PaeR7I CTCGAG 1 cut(s) 1007
PagI TCATGA 1 cut(s) 2917
PaqCI CACCTGC 2 cut(s) 164, 2994
PcsI WCGNNNNNNNCGW 1 cut(s) 478
PctI GAATGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 2464
PflMI CCANNNNNTGG 1 cut(s) 2161
PfoI TCCNGGA 2 cut(s) 1581, 2845
PinAI ACCGGT 2 cut(s) 224, 3096
PleI GAGTC 9 cut(s) 1018, 1219, 1381, 2126, 2574, 2637, 2647, 2858, 3305
PluTI GGCGCC 1 cut(s) 1638
PmaCI CACGTG 1 cut(s) 3033
PmlI CACGTG 1 cut(s) 3033
PpsI GAGTC 9 cut(s) 1018, 1219, 1381, 2126, 2574, 2637, 2647, 2858, 3305
Ppu21I YACGTR 2 cut(s) 473, 3033
PshBI ATTAAT 1 cut(s) 870
Psp124BI GAGCTC 1 cut(s) 243
Psp6I CCWGG 6 cut(s) 82, 549, 964, 1581, 2298, 2845
PspCI CACGTG 1 cut(s) 3033
PspFI CCCAGC 1 cut(s) 3045
PspGI CCWGG 6 cut(s) 82, 549, 964, 1581, 2298, 2845
PspN4I GGNNCC 9 cut(s) 80, 441, 617, 827, 885, 1537, 1636, 2867, 3044
PspPI GGNCC 6 cut(s) 337, 806, 956, 2669, 2865, 3042
PstI CTGCAG 2 cut(s) 2994, 3014
PstNI CAGNNNCTG 1 cut(s) 2626
PsuI RGATCY 8 cut(s) 369, 883, 997, 1585, 1717, 1742, 2359, 2835
RsaI GTAC 7 cut(s) 927, 1140, 1522, 1537, 1999, 2282, 3203
RsaNI GTAC 7 cut(s) 926, 1139, 1521, 1536, 1998, 2281, 3202
RseI CAYNNNNRTG 2 cut(s) 1095, 1821
SacI GAGCTC 1 cut(s) 243
Sau96I GGNCC 6 cut(s) 337, 806, 956, 2669, 2865, 3042
ScaI AGTACT 1 cut(s) 3203
SchI GAGTC 9 cut(s) 1019, 1220, 1381, 2127, 2575, 2638, 2648, 2859, 3306
ScrFI CCNGG 7 cut(s) 84, 551, 966, 1583, 2300, 2847, 3209
SduI GDGCHC 5 cut(s) 243, 830, 1372, 3030, 3274
SfaNI GCATC 4 cut(s) 600, 2192, 2236, 2697
SfcI CTRYAG 6 cut(s) 1704, 2272, 2990, 3010, 3178, 3197
SfoI GGCGCC 1 cut(s) 1636
Sfr274I CTCGAG 1 cut(s) 1007
SfuI TTCGAA 3 cut(s) 429, 1483, 1724
SinI GGWCC 4 cut(s) 337, 806, 956, 2669
SlaI CTCGAG 1 cut(s) 1007
SmiMI CAYNNNNRTG 2 cut(s) 1095, 1821
SmlI CTYRAG 2 cut(s) 992, 1007
SmoI CTYRAG 2 cut(s) 992, 1007
SpeI ACTAGT 3 cut(s) 986, 1397, 1573
SsiI CCGC 8 cut(s) 613, 1569, 2667, 2819, 2822, 2863, 2869, 3055
SspDI GGCGCC 1 cut(s) 1634
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 7 cut(s) 82, 549, 964, 1581, 2298, 2845, 3207
StyI CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2020
TaaI ACNGT 9 cut(s) 188, 925, 1679, 1997, 2280, 2591, 3182, 3201, 3259
TaiI ACGT 5 cut(s) 475, 484, 2297, 2561, 3035
TaqI TCGA 8 cut(s) 429, 464, 708, 1008, 1402, 1483, 1724, 2468
TaqII GACCGA 1 cut(s) 2088
TatI WGTACW 5 cut(s) 925, 1138, 1997, 2280, 3201
TauI GCSGC 4 cut(s) 616, 2824, 2866, 3057
TscAI CASTG 5 cut(s) 52, 493, 606, 1828, 2698
TseFI GTSAC 3 cut(s) 227, 2567, 3113
TseI GCWGC 8 cut(s) 595, 901, 2989, 2992, 3009, 3012, 3036, 3193
Tsp45I GTSAC 3 cut(s) 227, 2567, 3113
TspRI CASTG 5 cut(s) 52, 493, 606, 1828, 2698
Van91I CCANNNNNTGG 1 cut(s) 2161
Vha464I CTTAAG 1 cut(s) 992
VpaK11BI GGWCC 4 cut(s) 337, 806, 956, 2669
VspI ATTAAT 1 cut(s) 870
XapI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 1902, 2324, 2334, 2431, 2532
XhoI CTCGAG 1 cut(s) 1007
XmiI GTMKAC 1 cut(s) 2510
XmnI GAANNNNTTC 1 cut(s) 2464
ZrmI AGTACT 1 cut(s) 3203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.