MD01G1180500.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000281
Physical Location & Seq
Forward (+)
27981391 .. 27983802
2412 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1180500.v1.1.491

Sequence Viewer

Length: 2412 bp
ATGTATTTGAAGGACCGACGATTCCCAATTCCAAGTGGGGTCTCCCTTGATCTTTCTGGAAACTTTTTTAATTCTTTGATGCCGAGGTGGGTTTTCAGTCTTAAAAATCTAGTTTCTCTTCGTCTCAGTGATTGTTGGTTCCAAGGTCCAATTCCTAGCATTTCACAGAATATCACATCTTTGAGGGAAATTGATTTGTCAGGCAATTCTGTTAGTCTTGATCCGATTCCCAAATGGCTGTTTAACCAAAAAGACCTTGCCTTGAGTCTAGAATCTAATAACCTCACAGGACAACTTCCTAGCAGTATTCAGAATATGACTGGTCTTACAGCTCTTGATCTCAGTTTCAACGACTTCAATTCTACCATACCTGAATGGTTGTATAGCTTGACCAATCTCGAGTCCTTACTTCTTTCTTCCAGTGTCTTGCATGGTGAAATATCGAGTTCCATTGGAAACATGACATCCCTTGTCAATCTTCACTTGGATGGTAATCAGTTGGAAGGGAAAATCCCAAATTCTTTGGGACATCTTTGTAAGTTGAAAGTTCTTGATCTGTCAGAGAACCATTTCATGGTTCGAAGACCATCCGAAATCTTTGAAAGTTTGTCCAGATGTGGTCCAGATGGAATAAAGTCATTGTCGTTGAGGTATACTAATATATCAGGTCACATTCCAATGTCACTAGGAAATCTGTCAAGCTTAGAAAAATTGGACATATCTTTAAATCAGTTTAATGGAACTTTCACAGAAGTTATTGGTCAGCTCAAAATGCTAACGGATTTGGATATATCTTATAATTCGTTAGAAGGTGTGGTGTCGGAAGTGTCTTTTAGCAACCTTACAAAGTTGAAGCATTTCATTGCAAAAGGAAACTCATTTACTCTGAAAACTAGTCGAGATTGGGTTCCTCCTTTTCAACTTGAAATTTTGCAGCTGGATTCCTGGCATTTGGGGCCTGAATGGCCAATGTGGTTGCGGACACAAACGCAATTAAAAGAACTAAGCTTGTCTGGTACAGGAATTTCAAGTACTATTCCAACTTGGTTTTGGAACTTAACTTTCCAATTAGATTATCTGAATCTCTCTCACAATCAGTTGTATGGGCAGATTCAAAATATATTTGGTGCTTATGATTCAACGGTTGATCTTAGTTCTAACCAATTCACTGGTGCATTGCCTATTGTTCCCACCTCATTATATTGGCTAGATCTTTCCAATTCATCATTTTCTGGATCTGTTTTCCACTTCTTCTGTGATAGGCCGGATGAACCAAAGCAACTTTATATTCTTCATCTCGGGAACAATTTGCTCACTGGAAAAGTACCCGATTGTTGGATGAGTTGGCAATCCTTGAGATTCCTAAATTTAGAAAACAACATCCTAACTGGGAATGTCCCAATGTCCATGGGATACTTAGTTTGGCTGGGATCCCTGCACTTGCGCAATAATCACCTGTACGGAGAATTGCCACATTCCCTACAGAATACCTCGTTGTCAGTTCTTGACCTTAGTGGAAATGGGTTTTCCGGAAGCATACCAATATGGATAGGGAAAAGCCTTTCAGAGTTGCATGTTCTTATCCTTCGTTCAAATAAGTTTGAAGGAGATATTCCTAATGAAGTTTGTTATTTGACAAGTCTCCAGATATTGGACCTTGCACATAACAAACTCTCAGGAATGATACCGAGATGCTTCCACAATTTGAGCGCCTTGGCTGATTTTTCACAAATATTTTCTACAACTAGTTTTTGGGGTGTGGAAGAGGATGGACTTACAGAGAATGCAATCTTGGTAACGAAAGGGATAGAAATGGAATATACCAAGATTCTGGGATTCGTAAAAGGCATGGATCTTTCATGCAACTTTATGTATGGAGAGATCCCTGAAGAACTTACCGGCCTCCTCGCATTGCAGTCACTCAATTTATCGAATAATCACTTCACCGGAGGAATTCCTTCAAAGATTGGTAGTATGGCACAGTTAGAATCTCTCGATTTTTCCATGAACCAACTTGATGGTGAAATTCCTCCAAGCATGACGAAATTGACATTTCTGAGTCACTTAAACTTGTCCTACAACAATTTGACGGGACGAATTCCGGAAAGCACTCAACTGCAGAGCCTTGATCAGTCGAGCTTCGTCGGCAACGAACTATGCGGAGCTCCACTCAACAAGAATTGCAGCACGAATGGGGTGATACCGCCACCAACAGTTGAGCAAGACGGAGGAGGAGGATACCGTTTACTCGAAGACGAGTGGTTCTACGTGAGCTTGGGAGTTGGATTCTTCACGGGGTTTTGGATTGTGCTTGGTTCTTTGCTGGTAAACATGCCATGGAGCATTCTTCTTTCACAGTTGCTGAATAGGATAGTGCTTAAAATGTATCATGTAATTGTTGAATATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

804

Amino Acids

89.59

Weight (kDa)

5.12

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 89 - 216 2.6e-09 Leucine-rich repeat region
LRR_14 PF23598 222 - 336 2.9e-08 Leucine-rich repeat region
LRR_8 PF13855 234 - 293 1.4e-06 Leucine rich repeat
LRR_8 PF13855 523 - 572 1.2e-06 Leucine rich repeat
LRR_14 PF23598 621 - 712 3e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 798
Acc16I TGCGCA 1 cut(s) 1445
AccB7I CCANNNNNTGG 2 cut(s) 574, 1651
AccI GTMKAC 1 cut(s) 653
AccIII TCCGGA 2 cut(s) 1529, 2101
AciI CCGC 3 cut(s) 979, 2160, 2204
AclWI GGATC 6 cut(s) 215, 1243, 1425, 1438, 1860, 1876
AcoI YGGCCR 1 cut(s) 965
AcsI RAATTY 7 cut(s) 517, 927, 1023, 1366, 1953, 2025, 2097
AcuI CTGAAG 1 cut(s) 1908
AfaI GTAC 4 cut(s) 1018, 1033, 1326, 1460
AfiI CCNNNNNNNGG 3 cut(s) 574, 1335, 1651
AhlI ACTAGT 2 cut(s) 893, 1745
AjnI CCWGG 1 cut(s) 944
AjuI GAANNNNNNNTTGG 4 cut(s) 135, 167, 1775, 1807
AluBI AGCT 9 cut(s) 332, 387, 702, 766, 937, 1008, 2139, 2165, 2274
AluI AGCT 9 cut(s) 332, 387, 702, 766, 937, 1008, 2139, 2165, 2274
Alw21I GWGCWC 1 cut(s) 2167
Alw26I GTCTC 3 cut(s) 46, 128, 1646
AlwI GGATC 6 cut(s) 215, 1243, 1425, 1438, 1860, 1876
AlwNI CAGNNNCTG 1 cut(s) 2362
Ama87I CYCGRG 2 cut(s) 398, 1298
Aor13HI TCCGGA 2 cut(s) 1529, 2101
AoxI GGCC 4 cut(s) 956, 965, 1262, 1900
ApeKI GCWGC 2 cut(s) 934, 2184
ApoI RAATTY 7 cut(s) 517, 927, 1023, 1366, 1953, 2025, 2097
Asp700I GAANNNNTTC 3 cut(s) 569, 857, 1957
AspLEI GCGC 2 cut(s) 1446, 1712
AspS9I GGNCC 5 cut(s) 13, 146, 620, 956, 1654
AsuHPI GGTGA 5 cut(s) 446, 1445, 1936, 2033, 2209
AsuII TTCGAA 1 cut(s) 580
AvaI CYCGRG 2 cut(s) 398, 1298
AvaII GGWCC 4 cut(s) 13, 146, 620, 1654
BalI TGGCCA 1 cut(s) 967
BamHI GGATCC 1 cut(s) 1430
BanII GRGCYC 1 cut(s) 2167
BbsI GAAGAC 2 cut(s) 589, 2259
Bbv12I GWGCWC 1 cut(s) 2167
BbvI GCAGC 2 cut(s) 946, 2196
BccI CCATC 5 cut(s) 482, 595, 620, 1763, 2012
BciT130I CCWGG 1 cut(s) 946
BciVI GTATCC 2 cut(s) 1406, 2231
BclI TGATCA 1 cut(s) 2128
BcoDI GTCTC 3 cut(s) 46, 128, 1646
BcuI ACTAGT 2 cut(s) 893, 1745
BfaI CTAG 8 cut(s) 110, 156, 269, 300, 686, 894, 1208, 1746
BfmI CTRYAG 2 cut(s) 1481, 2117
BfoI RGCGCY 1 cut(s) 1713
BfuI GTATCC 2 cut(s) 1406, 2231
BglI GCCNNNNNGGC 1 cut(s) 964
BglII AGATCT 1 cut(s) 1210
BisI GCNGC 2 cut(s) 935, 2185
BlsI GCNGC 2 cut(s) 936, 2186
BmcAI AGTACT 1 cut(s) 1033
Bme1390I CCNGG 1 cut(s) 946
Bme18I GGWCC 4 cut(s) 13, 146, 620, 1654
BmeT110I CYCGRG 2 cut(s) 398, 1298
BmgT120I GGNCC 5 cut(s) 13, 146, 620, 956, 1654
BmiI GGNNCC 4 cut(s) 140, 909, 957, 1432
BmrFI CCNGG 1 cut(s) 946
BmrI ACTGGG 1 cut(s) 1398
BmsI GCATC 2 cut(s) 69, 1682
BmuI ACTGGG 1 cut(s) 1398
BpiI GAAGAC 2 cut(s) 589, 2259
BplI GAGNNNNNCTC 2 cut(s) 2154, 2186
BpmI CTGGAG 1 cut(s) 1628
Bpu14I TTCGAA 1 cut(s) 580
BpuEI CTTGAG 2 cut(s) 283, 1375
BsaAI YACGTR 1 cut(s) 2269
BsaBI GATNNNNATC 1 cut(s) 492
BsaI GGTCTC 1 cut(s) 46
BsaJI CCNNGG 5 cut(s) 83, 142, 1407, 1713, 2336
BsaWI WCCGGW 3 cut(s) 1529, 1946, 2101
Bsc4I CCNNNNNNNGG 3 cut(s) 574, 1335, 1651
Bse118I RCCGGY 1 cut(s) 1898
Bse1I ACTGG 5 cut(s) 325, 420, 1174, 1321, 1393
Bse3DI GCAATG 3 cut(s) 861, 1175, 1910
Bse8I GATNNNNATC 1 cut(s) 492
BseAI TCCGGA 2 cut(s) 1529, 2101
BseBI CCWGG 1 cut(s) 946
BseDI CCNNGG 5 cut(s) 83, 142, 1407, 1713, 2336
BseGI GGATG 7 cut(s) 464, 493, 587, 1273, 1344, 1380, 1774
BseJI GATNNNNATC 1 cut(s) 492
BseLI CCNNNNNNNGG 3 cut(s) 574, 1335, 1651
BseMI GCAATG 3 cut(s) 861, 1175, 1910
BseMII CTCAG 4 cut(s) 139, 355, 1689, 2048
BseNI ACTGG 5 cut(s) 325, 420, 1174, 1321, 1393
BseRI GAGGAG 3 cut(s) 1895, 2244, 2247
BseXI GCAGC 2 cut(s) 946, 2196
BseYI CCCAGC 1 cut(s) 1426
BsgI GTGCAG 1 cut(s) 1421
BshFI GGCC 4 cut(s) 958, 967, 1264, 1902
BsiHKAI GWGCWC 1 cut(s) 2167
BsiHKCI CYCGRG 2 cut(s) 398, 1298
BsiSI CCGG 5 cut(s) 1265, 1530, 1899, 1947, 2102
BslFI GGGAC 3 cut(s) 540, 1382, 2106
BslI CCNNNNNNNGG 3 cut(s) 574, 1335, 1651
BsmAI GTCTC 3 cut(s) 46, 128, 1646
BsmBI CGTCTC 1 cut(s) 128
BsmFI GGGAC 3 cut(s) 540, 1382, 2106
BsmI GAATGC 2 cut(s) 1789, 2343
BsnI GGCC 4 cut(s) 958, 967, 1264, 1902
Bso31I GGTCTC 1 cut(s) 46
BsoBI CYCGRG 2 cut(s) 398, 1298
Bsp119I TTCGAA 1 cut(s) 580
Bsp1286I GDGCHC 1 cut(s) 2167
Bsp13I TCCGGA 2 cut(s) 1529, 2101
Bsp19I CCATGG 2 cut(s) 1407, 2336
BspACI CCGC 3 cut(s) 979, 2160, 2204
BspANI GGCC 4 cut(s) 958, 967, 1264, 1902
BspCNI CTCAG 4 cut(s) 138, 354, 1688, 2049
BspEI TCCGGA 2 cut(s) 1529, 2101
BspLI GGNNCC 4 cut(s) 140, 909, 957, 1432
BspMAI CTGCAG 1 cut(s) 2121
BspPI GGATC 6 cut(s) 215, 1243, 1425, 1438, 1860, 1876
BspT104I TTCGAA 1 cut(s) 580
BspTNI GGTCTC 1 cut(s) 46
BsrDI GCAATG 3 cut(s) 861, 1175, 1910
BsrFI RCCGGY 1 cut(s) 1898
BsrI ACTGG 5 cut(s) 325, 420, 1174, 1321, 1393
BssAI RCCGGY 1 cut(s) 1898
BssECI CCNNGG 5 cut(s) 83, 142, 1407, 1713, 2336
BssNAI GTATAC 1 cut(s) 654
BssT1I CCWWGG 4 cut(s) 142, 1407, 1713, 2336
Bst1107I GTATAC 1 cut(s) 654
Bst2UI CCWGG 1 cut(s) 946
Bst4CI ACNGT 5 cut(s) 1144, 1983, 2215, 2243, 2358
Bst6I CTCTTC 2 cut(s) 123, 1758
BstBAI YACGTR 1 cut(s) 2269
BstBI TTCGAA 1 cut(s) 580
BstDEI CTNAG 9 cut(s) 125, 341, 703, 1004, 1151, 1417, 1511, 1675, 2057
BstDSI CCRYGG 2 cut(s) 1407, 2336
BstF5I GGATG 7 cut(s) 464, 493, 587, 1273, 1344, 1380, 1774
BstH2I RGCGCY 1 cut(s) 1713
BstHHI GCGC 2 cut(s) 1446, 1712
BstMAI GTCTC 3 cut(s) 46, 128, 1646
BstMWI GCNNNNNNNGC 4 cut(s) 772, 955, 964, 2145
BstNI CCWGG 1 cut(s) 946
BstNSI RCATGY 2 cut(s) 1577, 2335
BstSCI CCNGG 1 cut(s) 944
BstSFI CTRYAG 2 cut(s) 1481, 2117
BstV1I GCAGC 2 cut(s) 946, 2196
BstV2I GAAGAC 2 cut(s) 589, 2259
BstX2I RGATCY 5 cut(s) 1210, 1235, 1430, 1852, 1881
BstXI CCANNNNNNTGG 3 cut(s) 1169, 1831, 2018
BstYI RGATCY 5 cut(s) 1210, 1235, 1430, 1852, 1881
BstZ17I GTATAC 1 cut(s) 654
BsuI GTATCC 2 cut(s) 1406, 2231
BsuRI GGCC 4 cut(s) 958, 967, 1264, 1902
BtgI CCRYGG 2 cut(s) 1407, 2336
BtsCI GGATG 7 cut(s) 464, 493, 587, 1273, 1344, 1380, 1774
BtsIMutI CAGTG 4 cut(s) 133, 427, 1167, 1314
CaiI CAGNNNCTG 1 cut(s) 2362
CfoI GCGC 2 cut(s) 1446, 1712
Cfr10I RCCGGY 1 cut(s) 1898
Cfr13I GGNCC 5 cut(s) 13, 146, 620, 956, 1654
Csp6I GTAC 4 cut(s) 1017, 1032, 1325, 1459
CviQI GTAC 4 cut(s) 1017, 1032, 1325, 1459
DdeI CTNAG 9 cut(s) 125, 341, 703, 1004, 1151, 1417, 1511, 1675, 2057
DraI TTTAAA 1 cut(s) 726
EaeI YGGCCR 1 cut(s) 965
Eam1104I CTCTTC 2 cut(s) 123, 1758
EarI CTCTTC 2 cut(s) 123, 1758
Ecl136II GAGCTC 1 cut(s) 2165
Eco130I CCWWGG 4 cut(s) 142, 1407, 1713, 2336
Eco24I GRGCYC 1 cut(s) 2167
Eco31I GGTCTC 1 cut(s) 46
Eco47I GGWCC 4 cut(s) 13, 146, 620, 1654
Eco53kI GAGCTC 1 cut(s) 2165
Eco57I CTGAAG 1 cut(s) 1908
Eco88I CYCGRG 2 cut(s) 398, 1298
EcoICRI GAGCTC 1 cut(s) 2165
EcoO109I RGGNCCY 1 cut(s) 956
EcoRI GAATTC 2 cut(s) 1953, 2097
EcoRII CCWGG 1 cut(s) 944
EcoT14I CCWWGG 4 cut(s) 142, 1407, 1713, 2336
EcoT38I GRGCYC 1 cut(s) 2167
ErhI CCWWGG 4 cut(s) 142, 1407, 1713, 2336
Esp3I CGTCTC 1 cut(s) 128
FaqI GGGAC 3 cut(s) 540, 1382, 2106
FbaI TGATCA 1 cut(s) 2128
FblI GTMKAC 1 cut(s) 653
Fnu4HI GCNGC 2 cut(s) 935, 2185
FokI GGATG 7 cut(s) 451, 500, 574, 1280, 1351, 1367, 1781
FriOI GRGCYC 1 cut(s) 2167
Fsp4HI GCNGC 2 cut(s) 935, 2185
FspBI CTAG 8 cut(s) 110, 156, 269, 300, 686, 894, 1208, 1746
FspI TGCGCA 1 cut(s) 1445
GlaI GCGC 2 cut(s) 1445, 1711
GluI GCNGC 2 cut(s) 935, 2185
GsaI CCCAGC 1 cut(s) 1430
GsuI CTGGAG 1 cut(s) 1628
HaeII RGCGCY 1 cut(s) 1713
HaeIII GGCC 4 cut(s) 958, 967, 1264, 1902
HapII CCGG 5 cut(s) 1265, 1530, 1899, 1947, 2102
HhaI GCGC 2 cut(s) 1446, 1712
Hin6I GCGC 2 cut(s) 1444, 1710
HinP1I GCGC 2 cut(s) 1444, 1710
HindIII AAGCTT 2 cut(s) 700, 1006
HpaII CCGG 5 cut(s) 1265, 1530, 1899, 1947, 2102
HphI GGTGA 5 cut(s) 446, 1445, 1936, 2033, 2209
Hpy166II GTNNAC 3 cut(s) 654, 2246, 2329
Hpy188I TCNGA 9 cut(s) 225, 312, 562, 592, 823, 888, 1080, 1567, 2058
Hpy8I GTNNAC 3 cut(s) 654, 2246, 2329
Hpy99I CGWCG 2 cut(s) 21, 2147
HpyAV CCTTC 6 cut(s) 4, 497, 803, 1595, 1598, 1968
HpyCH4III ACNGT 5 cut(s) 1144, 1983, 2215, 2243, 2358
HpyCH4IV ACGT 1 cut(s) 2268
HpyF10VI GCNNNNNNNGC 4 cut(s) 772, 955, 964, 2145
HpyF3I CTNAG 9 cut(s) 125, 341, 703, 1004, 1151, 1417, 1511, 1675, 2057
HpySE526I ACGT 1 cut(s) 2268
HspAI GCGC 2 cut(s) 1444, 1710
Kpn2I TCCGGA 2 cut(s) 1529, 2101
Ksp22I TGATCA 1 cut(s) 2128
LmnI GCTCC 3 cut(s) 2162, 2170, 2340
Lsp1109I GCAGC 2 cut(s) 946, 2196
LweI GCATC 2 cut(s) 69, 1682
MaeI CTAG 8 cut(s) 110, 156, 269, 300, 686, 894, 1208, 1746
MaeII ACGT 1 cut(s) 2268
MaeIII GTNAC 5 cut(s) 668, 681, 1795, 1917, 2060
MflI RGATCY 5 cut(s) 1210, 1235, 1430, 1852, 1881
MhlI GDGCHC 1 cut(s) 2167
MlsI TGGCCA 1 cut(s) 967
MluNI TGGCCA 1 cut(s) 967
MlyI GAGTC 3 cut(s) 274, 410, 2068
MmeI TCCRAC 5 cut(s) 480, 801, 1064, 1316, 2263
Mox20I TGGCCA 1 cut(s) 967
MroI TCCGGA 2 cut(s) 1529, 2101
MroXI GAANNNNTTC 3 cut(s) 569, 857, 1957
MscI TGGCCA 1 cut(s) 967
MseI TTAA 9 cut(s) 69, 102, 243, 725, 735, 995, 1058, 2066, 2379
MslI CAYNNNNRTG 2 cut(s) 486, 677
Msp20I TGGCCA 1 cut(s) 967
MspA1I CMGCKG 1 cut(s) 937
MspI CCGG 5 cut(s) 1265, 1530, 1899, 1947, 2102
MspR9I CCNGG 1 cut(s) 946
Mva1269I GAATGC 2 cut(s) 1789, 2343
MvaI CCWGG 1 cut(s) 946
MwoI GCNNNNNNNGC 4 cut(s) 772, 955, 964, 2145
NcoI CCATGG 2 cut(s) 1407, 2336
NlaIV GGNNCC 4 cut(s) 140, 909, 957, 1432
NmeAIII GCCGAG 1 cut(s) 108
NmuCI GTSAC 4 cut(s) 668, 681, 1917, 2060
NsbI TGCGCA 1 cut(s) 1445
NspI RCATGY 2 cut(s) 1577, 2335
NspV TTCGAA 1 cut(s) 580
PaeR7I CTCGAG 1 cut(s) 398
PcsI WCGNNNNNNNCGW 1 cut(s) 2148
PctI GAATGC 2 cut(s) 1789, 2343
PdmI GAANNNNTTC 3 cut(s) 569, 857, 1957
PflMI CCANNNNNTGG 2 cut(s) 574, 1651
PkrI GCNGC 2 cut(s) 936, 2186
PleI GAGTC 3 cut(s) 273, 409, 2067
PpsI GAGTC 3 cut(s) 273, 409, 2067
Ppu21I YACGTR 1 cut(s) 2269
PsiI TTATAA 1 cut(s) 798
Psp124BI GAGCTC 1 cut(s) 2167
Psp6I CCWGG 1 cut(s) 944
PspFI CCCAGC 1 cut(s) 1426
PspGI CCWGG 1 cut(s) 944
PspN4I GGNNCC 4 cut(s) 140, 909, 957, 1432
PspPI GGNCC 5 cut(s) 13, 146, 620, 956, 1654
PstI CTGCAG 1 cut(s) 2121
PstNI CAGNNNCTG 1 cut(s) 2362
PsuI RGATCY 5 cut(s) 1210, 1235, 1430, 1852, 1881
PvuII CAGCTG 1 cut(s) 937
RsaI GTAC 4 cut(s) 1018, 1033, 1326, 1460
RsaNI GTAC 4 cut(s) 1017, 1032, 1325, 1459
RseI CAYNNNNRTG 2 cut(s) 486, 677
SacI GAGCTC 1 cut(s) 2167
SaqAI TTAA 9 cut(s) 69, 102, 243, 725, 735, 995, 1058, 2066, 2379
SatI GCNGC 2 cut(s) 935, 2185
Sau96I GGNCC 5 cut(s) 13, 146, 620, 956, 1654
ScaI AGTACT 1 cut(s) 1033
SchI GAGTC 3 cut(s) 274, 410, 2068
ScrFI CCNGG 1 cut(s) 946
SduI GDGCHC 1 cut(s) 2167
SfaNI GCATC 2 cut(s) 69, 1682
SfcI CTRYAG 2 cut(s) 1481, 2117
SfiI GGCCNNNNNGGCC 1 cut(s) 964
Sfr274I CTCGAG 1 cut(s) 398
SfuI TTCGAA 1 cut(s) 580
SinI GGWCC 4 cut(s) 13, 146, 620, 1654
SlaI CTCGAG 1 cut(s) 398
SmiMI CAYNNNNRTG 2 cut(s) 486, 677
SmlI CTYRAG 3 cut(s) 262, 398, 1354
SmoI CTYRAG 3 cut(s) 262, 398, 1354
SpeI ACTAGT 2 cut(s) 893, 1745
SsiI CCGC 3 cut(s) 979, 2160, 2204
SspI AATATT 1 cut(s) 1734
SspMI CTAG 8 cut(s) 110, 156, 269, 300, 686, 894, 1208, 1746
SstI GAGCTC 1 cut(s) 2167
StyD4I CCNGG 1 cut(s) 944
StyI CCWWGG 4 cut(s) 142, 1407, 1713, 2336
TaaI ACNGT 5 cut(s) 1144, 1983, 2215, 2243, 2358
TaiI ACGT 1 cut(s) 2271
TaqI TCGA 8 cut(s) 399, 443, 580, 898, 1931, 1995, 2135, 2250
TaqII GACCGA 1 cut(s) 30
TatI WGTACW 1 cut(s) 1031
Tru1I TTAA 9 cut(s) 69, 102, 243, 725, 735, 995, 1058, 2066, 2379
Tru9I TTAA 9 cut(s) 69, 102, 243, 725, 735, 995, 1058, 2066, 2379
TscAI CASTG 4 cut(s) 133, 427, 1174, 1321
TseFI GTSAC 4 cut(s) 668, 681, 1917, 2060
TseI GCWGC 2 cut(s) 934, 2184
Tsp45I GTSAC 4 cut(s) 668, 681, 1917, 2060
TspDTI ATGAA 8 cut(s) 562, 850, 1212, 1283, 1284, 1635, 1848, 2021
TspGWI ACGGA 3 cut(s) 794, 1476, 2241
TspRI CASTG 4 cut(s) 133, 427, 1174, 1321
Van91I CCANNNNNTGG 2 cut(s) 574, 1651
VpaK11BI GGWCC 4 cut(s) 13, 146, 620, 1654
XapI RAATTY 7 cut(s) 517, 927, 1023, 1366, 1953, 2025, 2097
XbaI TCTAGA 1 cut(s) 268
XceI RCATGY 2 cut(s) 1577, 2335
XcmI CCANNNNNNNNNTGG 1 cut(s) 1047
XhoI CTCGAG 1 cut(s) 398
XmiI GTMKAC 1 cut(s) 653
XmnI GAANNNNTTC 3 cut(s) 569, 857, 1957
XspI CTAG 8 cut(s) 110, 156, 269, 300, 686, 894, 1208, 1746
ZrmI AGTACT 1 cut(s) 1033
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.