MD15G1426700.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000281
Physical Location & Seq
Forward (+)
52729199 .. 52733002
3804 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1426700.v1.1.491

Sequence Viewer

Length: 3081 bp
ATGGATAGAGTCATGAGACTTGTTCCAATACTCAGCTTTCTTCTATCCATTGCGTCTTTTACACTCAGCTTATGCAATGGAAACCCGAATGTGCCTTGCCGAGAAAATGAGAGACAAACACTTCTTATGTTCAAGAAAGATCTCAATGATTCTTCAAATCTGCTTTCCTCTTGGGTTGCTGAAGGCGATTGTTGCACCTGGACCGGTGTTGCCTGCGACAATTTAACCGGTCATGTCCGTGAGCTCCACCTTGCTGGTTATTATGATGACGTGGCTGGTGAGGACCGTAAGCTGGGTGGTAAGGTAAATCCTTCTCTACTCAATTTAAAGCATCTCACCTACTTGGACTTGAGCTACAATGATTTTGGAGGACGACAGTTTCCTAGCTTTCTGGGTTCTCTTGAAGGTTTAAGATATCTTAACCTCTCGTTTGCATGGTTCAACGGAACCATTCCTCATCAGTTGGGAAATCTCTCGAGCCTGCGTTATCTGGACCTTTCTGATAACTATGGTTCGAAGGTCGAGAATCTCAAATGGCTCTTTGGTCTTTCTCAGTTGAAACATCTTGACATGAGTTATGTAGATCTTACCAACGCATCTCATTGGTTACAAGTAAACACACTCCCTTCTCTGCTGGTCGAGTTACATTTGTTTGATTGTGAACTTTATCACATGCCAAGTGGTATTGCGAACTTGACAAGTCTTAAAGTTCTTGATCTGTCCTACAACTATTTCAACTCTACCATACCGCAATGGTTACAAGTAAACACACTCCCTTCTCTCCTGGTCGAGTTGCACTTGTCGGATTGCAATCTTTATCACATACCAAGTGGTATTGCGAACTTGACAAGTCTTAAAGTTCTTGATCTATCCATAAACTATTTCAACTCTACCATACCTCAATGGTTGTACAGTTTGAACCATCTTGAGTCCCTTGATCTTTCTGTCAATGCTTTCCATGGTGAGATTTCGAGTTCCCTTGGAAACTTGACAGCCCTTGTTGATCTTCAATTACATCATAATCAGCTTGAAGGGGAAATCCCAAACTCATTGGGAAATCTTTGTAAGTTGACTTCTTTTGATCTATGGTCAAACAATTTCCGGGGGAGGGTATCAGAAATCTTTGAAATTTTGTCTAGCTGTAGTAATTTTGGTCAAATAGATTATTTACATCTTTCGGATAATAATTTTTCAGGTCATTTATCTGATCAACTGGGATTTTTAAAAAATTTACGCATCCTTGATCTTTCAAATAATTCAATATCGGGCCCCATTCCAGTGTCTTTAGGAAATCTATCACGTTTAGAGGAGTTGATCATTTCTGACAATTCATTCGAAGGCCCCATTCCAGTATCTTTAGGAAATCTATCAAGTTTAGAGGTGTTGATCATTTCTGACAATTCATTCGAGGGGGTTGTCTCTGAAGCTCATTTTACTAATCTTACAAGCTTGTTTACCTTTTATGCAAATGAGAACTCCTTGACTCTTAAAACTAGCCCAGACTGGGTTCCTCCTTTTCAACTTTCTACGTTGGGTTTAAGTTCTTGGCGTCTGGACCCATCACAGTTGCCTGCATGGCTTCAGAGTCAAAAACATTTGTTCGCTCTTAATATGTCCAATACAGGAATTTCTGGTACCATTCCGGCTTGGTTGTGGAACATTTTTTCTGTTGAAAACATGGGTCCAGGTATCTTTGTGGATCTCTCTCATAATCAATTGTCCGGGGAGGTTCCAAATATAGCTTCTACCCACAGGCCAAAACAAAAGCATTTGGAATTTGTTTATCTTGCCATTGACTTAGGATCTAACCAATTCAACGGTTCATTGCCTCTTGTGTCTTCGACAGTGATTGCACTAGATCTTTCCAATTCATTATTTTCTGGAACTCTCTCTCACTTCTTTTGTGATAGGAGTGATGTACCTAAAAACCTTCAAACTCTTCTTCTTGACAACAATCTCCTCACTGGAGAAATTCCGGATTGTCGGTTACACTGGCCAAACTTGACAGTAGTGAATTTAGAAGACAACAATTTGACGGGGAAAATTCCAAGCTCTATCGGGGACTTACTTTCCCTTCAATCATTGCACTTGCGCAATAATAACCTATATGGAGAATTACCCGTGTCCCTACAAAACTGTCAAGAGTTGCTCCTTCTTGACCTTCTTGGAAATAAGTTTGTTGGAAGCATTCCGATATGGTTTGGCCAAAGCTTGGTGGTTCTTATTCTTCGCTCAAATATGTTCCAAGGCACCATTCCTCATGAACTTTGTAGTCTCACAAAGCTCCAAATCTTGGACCTTGCGCATAACAATCTCTCGGGAACGATACCAAGATGTTTCCAAAATTTGTCATCCATGGCCACTAAATTTTCAAGTGAAGAAGCTCCCAGTATTGAATTCTCCGTTTCTTCGGTTACTGGTATGAATACTTTTCAGCTCTCCTACTCCTACACAGAGAATGCGGTTTTTGTGGCCAAAGGCAGAGAAGTGAAATATGACACAGTGCTTCGTTTGGTAACTAGCTTGGACCTTTCAAGGAACATGTTATTTGGAGAAATCCCTGAAGAGTTGACCAACCTCACTAGCCTACAAACATTGAATTTATCTGATAATCTTCTGGCCGGAAGAATCCCTTCCAAAATCGGTGATATGGGAGCGTTAGAGACGCTTGATTTGTCTGTGAACCAACTTTCTGGCGAAATTTCTCCAAGCATCTCGAATTTAACATTTCTCAATCATCTAAATTTGTCCTATAACAATCTGATTGGGCAAATTCCAAAAAGCACTCAGCTTCAGACCTTTGATTTGTCCAGTTATGTTGGCAATAAACTTTGCGGACCTCCACTGGAAGAGCGTTGCAGTACAAATGAGGCCATGCCACCAGTAGGTGATGAGAAGCAGAGAGAAGGTCATTTTCTTGAAGACGGTGGTTTCTATCTGAGTTTGGGGCTTGGTTTTGCATTTGGGTTTTGGATTGTTCTTGGTTCATTGTTGTCTAATGTGCCATGGAGCAATGCAATTTCTCAGTTCCAAAATCGCATTGTGAAGAAGTTTTATGCGGCAATCGCTGAACGTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

1027

Amino Acids

113.93

Weight (kDa)

5.05

Isoelectric Point (pI)

34.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 73 1.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 107 - 261 2.3e-09 Leucine-rich repeat region
LRR_14 PF23598 216 - 365 8.2e-10 Leucine-rich repeat region
LRR_8 PF13855 262 - 318 1.1e-07 Leucine rich repeat
LRR_14 PF23598 382 - 464 4.8e-08 Leucine-rich repeat region
LRR_8 PF13855 388 - 444 2.6e-06 Leucine rich repeat
LRR_8 PF13855 643 - 702 2.3e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 2093, 2304
Acc65I GGTACC 1 cut(s) 1634
AccB1I GGYRCC 2 cut(s) 1634, 2249
AccB7I CCANNNNNTGG 2 cut(s) 2212, 2293
AccIII TCCGGA 1 cut(s) 1975
AciI CCGC 4 cut(s) 749, 2462, 2835, 3059
AclI AACGTT 1 cut(s) 3073
AclWI GGATC 2 cut(s) 1707, 1810
AcoI YGGCCR 5 cut(s) 1994, 2203, 2358, 2472, 2619
AcuI CTGAAG 5 cut(s) 201, 1443, 1565, 2583, 2777
AcyI GRCGYC 1 cut(s) 1549
AfaI GTAC 4 cut(s) 911, 1636, 1920, 2863
AfiI CCNNNNNNNGG 6 cut(s) 292, 1108, 1504, 2212, 2293, 2885
AflIII ACRYGT 1 cut(s) 2541
AgeI ACCGGT 2 cut(s) 203, 227
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 3 cut(s) 197, 783, 1684
AjuI GAANNNNNNNTTGG 4 cut(s) 1726, 1758, 2238, 2270
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 5 cut(s) 10, 106, 1423, 2279, 2657
AlwI GGATC 2 cut(s) 1707, 1810
Ama87I CYCGRG 2 cut(s) 475, 2317
Aor13HI TCCGGA 1 cut(s) 1975
AoxI GGCC 9 cut(s) 1267, 1339, 1754, 1994, 2203, 2358, 2472, 2619, 2871
ApaI GGGCCC 1 cut(s) 1271
ArsI GACNNNNNNTTYG 8 cut(s) 1316, 1348, 1388, 1420, 2656, 2688, 2788, 2820
AsiGI ACCGGT 2 cut(s) 203, 227
Asp700I GAANNNNTTC 1 cut(s) 2632
Asp718I GGTACC 1 cut(s) 1634
AspLEI GCGC 2 cut(s) 2094, 2305
AsuC2I CCSGG 2 cut(s) 1103, 1723
AsuHPI GGTGA 5 cut(s) 290, 328, 974, 2657, 2900
AsuII TTCGAA 2 cut(s) 515, 1335
AvaI CYCGRG 2 cut(s) 475, 2317
AvaII GGWCC 8 cut(s) 201, 283, 493, 1555, 1682, 2296, 2527, 2837
BaeGI GKGCMC 1 cut(s) 1271
BalI TGGCCA 4 cut(s) 1996, 2205, 2360, 2474
BanI GGYRCC 2 cut(s) 1634, 2249
BanII GRGCYC 2 cut(s) 246, 1271
BarI GAAGNNNNNNTAC 2 cut(s) 1057, 1089
BbsI GAAGAC 3 cut(s) 1830, 2028, 2928
Bbv12I GWGCWC 1 cut(s) 246
BccI CCATC 2 cut(s) 930, 1567
BciT130I CCWGG 3 cut(s) 199, 785, 1686
BclI TGATCA 3 cut(s) 1207, 1314, 1386
BcnI CCSGG 2 cut(s) 1103, 1723
BcoDI GTCTC 5 cut(s) 10, 106, 1423, 2279, 2657
BfaI CTAG 6 cut(s) 384, 1137, 1494, 1856, 2520, 2583
BfmI CTRYAG 1 cut(s) 1141
BglI GCCNNNNNGGC 1 cut(s) 1576
BglII AGATCT 3 cut(s) 139, 583, 1858
BisI GCNGC 1 cut(s) 3060
BlsI GCNGC 1 cut(s) 3061
Bme1390I CCNGG 5 cut(s) 199, 785, 1103, 1686, 1723
Bme18I GGWCC 8 cut(s) 201, 283, 493, 1555, 1682, 2296, 2527, 2837
BmeT110I CYCGRG 2 cut(s) 475, 2317
BmgBI CACGTC 1 cut(s) 271
BmrFI CCNGG 5 cut(s) 199, 785, 1103, 1686, 1723
BmrI ACTGGG 3 cut(s) 1223, 1513, 2382
BmsI GCATC 4 cut(s) 340, 605, 1245, 2721
BmuI ACTGGG 3 cut(s) 1223, 1513, 2382
BpiI GAAGAC 3 cut(s) 1830, 2028, 2928
BpmI CTGGAG 1 cut(s) 1986
Bpu14I TTCGAA 2 cut(s) 515, 1335
BpuEI CTTGAG 2 cut(s) 370, 947
BpuMI CCSGG 2 cut(s) 1103, 1723
BsaBI GATNNNNATC 1 cut(s) 810
BsaHI GRCGYC 1 cut(s) 1549
BsaJI CCNNGG 7 cut(s) 958, 979, 1102, 1722, 2245, 2355, 3005
BsaWI WCCGGW 3 cut(s) 203, 227, 1975
Bsc4I CCNNNNNNNGG 6 cut(s) 292, 1108, 1504, 2212, 2293, 2885
Bse118I RCCGGY 2 cut(s) 203, 227
Bse3DI GCAATG 6 cut(s) 48, 82, 758, 1823, 2081, 3019
Bse8I GATNNNNATC 1 cut(s) 810
BseAI TCCGGA 1 cut(s) 1975
BseBI CCWGG 3 cut(s) 199, 785, 1686
BseDI CCNNGG 7 cut(s) 958, 979, 1102, 1722, 2245, 2355, 3005
BseGI GGATG 2 cut(s) 1236, 2351
BseJI GATNNNNATC 1 cut(s) 810
BseLI CCNNNNNNNGG 6 cut(s) 292, 1108, 1504, 2212, 2293, 2885
BseMI GCAATG 6 cut(s) 48, 82, 758, 1823, 2081, 3019
BseMII CTCAG 6 cut(s) 46, 79, 566, 2801, 2930, 3038
BseRI GAGGAG 2 cut(s) 1322, 1949
BseSI GKGCMC 1 cut(s) 1271
BseYI CCCAGC 1 cut(s) 292
BshFI GGCC 9 cut(s) 1269, 1341, 1756, 1996, 2205, 2360, 2474, 2621, 2873
BshNI GGYRCC 2 cut(s) 1634, 2249
BshTI ACCGGT 2 cut(s) 203, 227
BsiHKAI GWGCWC 1 cut(s) 246
BsiHKCI CYCGRG 2 cut(s) 475, 2317
BsiSI CCGG 7 cut(s) 204, 228, 1102, 1643, 1722, 1976, 2622
BslFI GGGAC 3 cut(s) 916, 2075, 2110
BslI CCNNNNNNNGG 6 cut(s) 292, 1108, 1504, 2212, 2293, 2885
BsmAI GTCTC 5 cut(s) 10, 106, 1423, 2279, 2657
BsmBI CGTCTC 1 cut(s) 2657
BsmFI GGGAC 3 cut(s) 916, 2075, 2110
BsmI GAATGC 2 cut(s) 2187, 2464
BsnI GGCC 9 cut(s) 1269, 1341, 1756, 1996, 2205, 2360, 2474, 2621, 2873
BsoBI CYCGRG 2 cut(s) 475, 2317
Bsp119I TTCGAA 2 cut(s) 515, 1335
Bsp120I GGGCCC 1 cut(s) 1267
Bsp1286I GDGCHC 2 cut(s) 246, 1271
Bsp13I TCCGGA 1 cut(s) 1975
Bsp1407I TGTACA 1 cut(s) 909
Bsp19I CCATGG 3 cut(s) 958, 2355, 3005
BspACI CCGC 4 cut(s) 749, 2462, 2835, 3059
BspANI GGCC 9 cut(s) 1269, 1341, 1756, 1996, 2205, 2360, 2474, 2621, 2873
BspCNI CTCAG 6 cut(s) 45, 78, 565, 2800, 2931, 3037
BspEI TCCGGA 1 cut(s) 1975
BspHI TCATGA 2 cut(s) 12, 2260
BspPI GGATC 2 cut(s) 1707, 1810
BspQI GCTCTTC 1 cut(s) 2844
BspT104I TTCGAA 2 cut(s) 515, 1335
BspT107I GGYRCC 2 cut(s) 1634, 2249
BsrDI GCAATG 6 cut(s) 48, 82, 758, 1823, 2081, 3019
BsrFI RCCGGY 2 cut(s) 203, 227
BsrGI TGTACA 1 cut(s) 909
BssAI RCCGGY 2 cut(s) 203, 227
BssECI CCNNGG 7 cut(s) 958, 979, 1102, 1722, 2245, 2355, 3005
BssNI GRCGYC 1 cut(s) 1549
BssT1I CCWWGG 5 cut(s) 958, 979, 2245, 2355, 3005
Bst2UI CCWGG 3 cut(s) 199, 785, 1686
Bst6I CTCTTC 3 cut(s) 1944, 2559, 2844
BstACI GRCGYC 1 cut(s) 1549
BstAUI TGTACA 1 cut(s) 909
BstBI TTCGAA 2 cut(s) 515, 1335
BstC8I GCNNGC 3 cut(s) 214, 482, 1572
BstDEI CTNAG 7 cut(s) 32, 65, 552, 1798, 2787, 2939, 3024
BstDSI CCRYGG 3 cut(s) 958, 2355, 3005
BstF5I GGATG 2 cut(s) 1236, 2351
BstHHI GCGC 2 cut(s) 2094, 2305
BstMAI GTCTC 5 cut(s) 10, 106, 1423, 2279, 2657
BstMWI GCNNNNNNNGC 3 cut(s) 192, 1576, 3065
BstNI CCWGG 3 cut(s) 199, 785, 1686
BstNSI RCATGY 2 cut(s) 676, 2545
BstSCI CCNGG 5 cut(s) 197, 783, 1101, 1684, 1721
BstSFI CTRYAG 1 cut(s) 1141
BstSLI GKGCMC 1 cut(s) 1271
BstV2I GAAGAC 3 cut(s) 1830, 2028, 2928
BstX2I RGATCY 5 cut(s) 139, 583, 1699, 1802, 1858
BstXI CCANNNNNNTGG 2 cut(s) 254, 2693
BstYI RGATCY 5 cut(s) 139, 583, 1699, 1802, 1858
BsuRI GGCC 9 cut(s) 1269, 1341, 1756, 1996, 2205, 2360, 2474, 2621, 2873
BtgI CCRYGG 3 cut(s) 958, 2355, 3005
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 2 cut(s) 1236, 2351
BtsIMutI CAGTG 6 cut(s) 1284, 1851, 1962, 1990, 2508, 2843
Cac8I GCNNGC 3 cut(s) 214, 482, 1572
CciI TCATGA 2 cut(s) 12, 2260
CfoI GCGC 2 cut(s) 2094, 2305
Cfr10I RCCGGY 2 cut(s) 203, 227
CseI GACGC 3 cut(s) 42, 1538, 2674
Csp6I GTAC 4 cut(s) 910, 1635, 1919, 2862
CspAI ACCGGT 2 cut(s) 203, 227
CviQI GTAC 4 cut(s) 910, 1635, 1919, 2862
DdeI CTNAG 7 cut(s) 32, 65, 552, 1798, 2787, 2939, 3024
DraI TTTAAA 2 cut(s) 327, 1224
EaeI YGGCCR 5 cut(s) 1994, 2203, 2358, 2472, 2619
Eam1104I CTCTTC 3 cut(s) 1944, 2559, 2844
EarI CTCTTC 3 cut(s) 1944, 2559, 2844
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 5 cut(s) 958, 979, 2245, 2355, 3005
Eco24I GRGCYC 2 cut(s) 246, 1271
Eco32I GATATC 1 cut(s) 416
Eco47I GGWCC 8 cut(s) 201, 283, 493, 1555, 1682, 2296, 2527, 2837
Eco53kI GAGCTC 1 cut(s) 244
Eco57I CTGAAG 5 cut(s) 201, 1443, 1565, 2583, 2777
Eco88I CYCGRG 2 cut(s) 475, 2317
EcoICRI GAGCTC 1 cut(s) 244
EcoO109I RGGNCCY 2 cut(s) 1268, 1340
EcoRI GAATTC 1 cut(s) 2396
EcoRII CCWGG 3 cut(s) 197, 783, 1684
EcoRV GATATC 1 cut(s) 416
EcoT14I CCWWGG 5 cut(s) 958, 979, 2245, 2355, 3005
EcoT38I GRGCYC 2 cut(s) 246, 1271
ErhI CCWWGG 5 cut(s) 958, 979, 2245, 2355, 3005
Esp3I CGTCTC 1 cut(s) 2657
FalI AAGNNNNNCTT 2 cut(s) 2617, 2649
FaqI GGGAC 3 cut(s) 916, 2075, 2110
FbaI TGATCA 3 cut(s) 1207, 1314, 1386
Fnu4HI GCNGC 1 cut(s) 3060
FokI GGATG 2 cut(s) 1223, 2338
FriOI GRGCYC 2 cut(s) 246, 1271
Fsp4HI GCNGC 1 cut(s) 3060
FspBI CTAG 6 cut(s) 384, 1137, 1494, 1856, 2520, 2583
FspI TGCGCA 2 cut(s) 2093, 2304
GlaI GCGC 2 cut(s) 2093, 2304
GluI GCNGC 1 cut(s) 3060
GsaI CCCAGC 1 cut(s) 296
GsuI CTGGAG 1 cut(s) 1986
HaeIII GGCC 9 cut(s) 1269, 1341, 1756, 1996, 2205, 2360, 2474, 2621, 2873
HapII CCGG 7 cut(s) 204, 228, 1102, 1643, 1722, 1976, 2622
HgaI GACGC 3 cut(s) 42, 1538, 2674
HhaI GCGC 2 cut(s) 2094, 2305
Hin1I GRCGYC 1 cut(s) 1549
Hin6I GCGC 2 cut(s) 2092, 2303
HinP1I GCGC 2 cut(s) 2092, 2303
HincII GTYRAC 2 cut(s) 1071, 2571
HindII GTYRAC 2 cut(s) 1071, 2571
HindIII AAGCTT 2 cut(s) 1447, 2209
HinfI GANTC 7 cut(s) 9, 149, 526, 929, 1483, 1585, 2628
HpaII CCGG 7 cut(s) 204, 228, 1102, 1643, 1722, 1976, 2622
HphI GGTGA 5 cut(s) 290, 328, 974, 2657, 2900
Hpy166II GTNNAC 7 cut(s) 616, 662, 766, 1071, 1455, 2571, 2683
Hpy8I GTNNAC 7 cut(s) 616, 662, 766, 1071, 1455, 2571, 2683
HpyCH4IV ACGT 4 cut(s) 270, 1300, 1529, 3073
HpyF10VI GCNNNNNNNGC 3 cut(s) 192, 1576, 3065
HpyF3I CTNAG 7 cut(s) 32, 65, 552, 1798, 2787, 2939, 3024
HpySE526I ACGT 4 cut(s) 270, 1300, 1529, 3073
Hsp92I GRCGYC 1 cut(s) 1549
HspAI GCGC 2 cut(s) 2092, 2303
Kpn2I TCCGGA 1 cut(s) 1975
KpnI GGTACC 1 cut(s) 1638
Ksp22I TGATCA 3 cut(s) 1207, 1314, 1386
LguI GCTCTTC 1 cut(s) 2844
LmnI GCTCC 6 cut(s) 249, 2154, 2289, 2389, 2654, 3009
LweI GCATC 4 cut(s) 340, 605, 1245, 2721
MaeI CTAG 6 cut(s) 384, 1137, 1494, 1856, 2520, 2583
MaeII ACGT 4 cut(s) 270, 1300, 1529, 3073
MaeIII GTNAC 6 cut(s) 606, 642, 756, 1986, 2413, 2515
MfeI CAATTG 1 cut(s) 1715
MflI RGATCY 5 cut(s) 139, 583, 1699, 1802, 1858
MhlI GDGCHC 2 cut(s) 246, 1271
MlsI TGGCCA 4 cut(s) 1996, 2205, 2360, 2474
MluNI TGGCCA 4 cut(s) 1996, 2205, 2360, 2474
MlyI GAGTC 4 cut(s) 18, 938, 1477, 1594
MmeI TCCRAC 2 cut(s) 783, 2161
Mox20I TGGCCA 4 cut(s) 1996, 2205, 2360, 2474
MroI TCCGGA 1 cut(s) 1975
MroXI GAANNNNTTC 1 cut(s) 2632
MscI TGGCCA 4 cut(s) 1996, 2205, 2360, 2474
MslI CAYNNNNRTG 2 cut(s) 237, 1277
Msp20I TGGCCA 4 cut(s) 1996, 2205, 2360, 2474
MspI CCGG 7 cut(s) 204, 228, 1102, 1643, 1722, 1976, 2622
MspR9I CCNGG 5 cut(s) 199, 785, 1103, 1686, 1723
MunI CAATTG 1 cut(s) 1715
Mva1269I GAATGC 2 cut(s) 2187, 2464
MvaI CCWGG 3 cut(s) 199, 785, 1686
MwoI GCNNNNNNNGC 3 cut(s) 192, 1576, 3065
NciI CCSGG 2 cut(s) 1103, 1723
NcoI CCATGG 3 cut(s) 958, 2355, 3005
NmeAIII GCCGAG 1 cut(s) 125
NsbI TGCGCA 2 cut(s) 2093, 2304
NspI RCATGY 2 cut(s) 676, 2545
NspV TTCGAA 2 cut(s) 515, 1335
PaeR7I CTCGAG 1 cut(s) 475
PagI TCATGA 2 cut(s) 12, 2260
PciI ACATGT 1 cut(s) 2541
PciSI GCTCTTC 1 cut(s) 2844
PctI GAATGC 2 cut(s) 2187, 2464
PdmI GAANNNNTTC 1 cut(s) 2632
PfeI GAWTC 3 cut(s) 149, 526, 2628
PflMI CCANNNNNTGG 2 cut(s) 2212, 2293
PinAI ACCGGT 2 cut(s) 203, 227
PkrI GCNGC 1 cut(s) 3061
PleI GAGTC 4 cut(s) 17, 937, 1477, 1593
PpsI GAGTC 4 cut(s) 17, 937, 1477, 1593
PscI ACATGT 1 cut(s) 2541
Psp124BI GAGCTC 1 cut(s) 246
Psp1406I AACGTT 1 cut(s) 3073
Psp6I CCWGG 3 cut(s) 197, 783, 1684
PspFI CCCAGC 1 cut(s) 292
PspGI CCWGG 3 cut(s) 197, 783, 1684
PspOMI GGGCCC 1 cut(s) 1267
PsuI RGATCY 5 cut(s) 139, 583, 1699, 1802, 1858
RsaI GTAC 4 cut(s) 911, 1636, 1920, 2863
RsaNI GTAC 4 cut(s) 910, 1635, 1919, 2862
RseI CAYNNNNRTG 2 cut(s) 237, 1277
SacI GAGCTC 1 cut(s) 246
SapI GCTCTTC 1 cut(s) 2844
SatI GCNGC 1 cut(s) 3060
SchI GAGTC 4 cut(s) 18, 938, 1477, 1594
ScrFI CCNGG 5 cut(s) 199, 785, 1103, 1686, 1723
SduI GDGCHC 2 cut(s) 246, 1271
SfaNI GCATC 4 cut(s) 340, 605, 1245, 2721
SfcI CTRYAG 1 cut(s) 1141
Sfr274I CTCGAG 1 cut(s) 475
SfuI TTCGAA 2 cut(s) 515, 1335
SinI GGWCC 8 cut(s) 201, 283, 493, 1555, 1682, 2296, 2527, 2837
SlaI CTCGAG 1 cut(s) 475
SmiMI CAYNNNNRTG 2 cut(s) 237, 1277
SmlI CTYRAG 3 cut(s) 349, 475, 926
SmoI CTYRAG 3 cut(s) 349, 475, 926
SsiI CCGC 4 cut(s) 749, 2462, 2835, 3059
SspMI CTAG 6 cut(s) 384, 1137, 1494, 1856, 2520, 2583
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 5 cut(s) 197, 783, 1101, 1684, 1721
StyI CCWWGG 5 cut(s) 958, 979, 2245, 2355, 3005
TaiI ACGT 4 cut(s) 273, 1303, 1532, 3076
TatI WGTACW 2 cut(s) 909, 2861
TauI GCSGC 1 cut(s) 3062
TfiI GAWTC 3 cut(s) 149, 526, 2628
TscAI CASTG 6 cut(s) 1284, 1851, 1969, 1997, 2508, 2850
TspDTI ATGAA 7 cut(s) 1320, 1392, 1812, 1860, 2277, 2438, 2976
TspGWI ACGGA 3 cut(s) 227, 459, 2392
TspRI CASTG 6 cut(s) 1284, 1851, 1969, 1997, 2508, 2850
Van91I CCANNNNNTGG 2 cut(s) 2212, 2293
VpaK11BI GGWCC 8 cut(s) 201, 283, 493, 1555, 1682, 2296, 2527, 2837
XceI RCATGY 2 cut(s) 676, 2545
XhoI CTCGAG 1 cut(s) 475
XmnI GAANNNNTTC 1 cut(s) 2632
XspI CTAG 6 cut(s) 384, 1137, 1494, 1856, 2520, 2583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.