Rw1G034010

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
61923186 .. 61926097
2912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G034010.1

Sequence Viewer

Length: 2871 bp
ATGGGTAGGATCATGGGAGCGACCTTACTTCTCTGGTTTCTAATCACTGCAACCACTATCATTAGCTTGTGTAATGGGAACCCTGGTGTGGCTTGCAAAGAAAGTGAAAGACTAGCACTTCTGATGTTGAAGCAAGATTTTACTGATCCTTCAAATCGGCTTTTATCATGGGCAGGTGAAGGAGACTGTTGCCATTGGACTGGAGTTGTCTGTGATAATGTAACCGGTCACATACGCGAGCTCCACCTTGGAAGTTACTCTAATCTCAACTCTTCCTCTTACTTGGGAGGTAAGATAAATCCTTCTCTGCTCAATTTAACGCAACTAACCTACTTGGACCTGAGTAACAACTTTTTCCAAGGAATGCAGATCCCTAGCTTCTTTGGTTCTCTTAATAGTTTAACTCATCTTGACCTTTCAAGAAGCTTCGAAGGAATGGTTCCTCCTCAACTGGGGAATCTCTCGAATCTACGTGATCTACGTCTCAGTGGTTATGGTTTGAAGGCTGAGAACCTTCAATGGATTTCTGGTCTTTCTCAGTTGGAACACCTGGACGCGAGTTTTCTTGATCTTAGCAAAGTATCTGATGATTGGCTGCCAGTGATACAGATGCGGCTCCCCTCTTTGGTAGAGTTGAATATGTCAGCTTGCAGTCTCCATTACATTCCCCATTTAACTATCATCAATTTTACTTCACTTGCCATCCTCGATCTTTCTTTCAACAGCTTTAATTCTTTCATGCCTAAGTGGGTTTTCAGTTTCAGAAATCTATTGTCTCTTTCTCTTAGAGATTGTGGTTTCCAAGGTCCAATTCCTAGCAGTAGCAGCCCACACAATATCACATCTCTCAGGGAGATTGATCTCTCAATTAATAACATTAGGGAGCCGATACCGAAATGGCTGCTTAACAACAAAGACCTTACCGTACTCAATCTAGGATACAATTCTTATACAGGACCAATTCCAGGTGGCATTGTGAATATGACTAGTCTTAAGGATCTTAATCTCGACTCTAATTCTTTCATCTCTACCATACCTGAATGGTTGTCTAGTTTTAATAATCTTGAATCCTTGGTTCTTTCTAACAATCACTTGGACGGTGAAATTTTGAGTTCCATTGGAAACTTGACATCCATTGTATATCTTGGTTTAGATCGTAATCATTTTGAAGGGACAATCCCAAACTCCTTGGGCAATCTGTCTTCCTTAGAGTCATTACAGATTTCATACAATTCGTTTCATGGAACTCTTCCAGAGACCATTGGCCAACTCAAAAGGCTAACAGCTTTGGATATATCTTTTAATTCATTTGAAGGTGTAGTGTCTGAAGTTCATTTTACACATCTTACAAGTTTAAAATCCTTCAGAGCACATGGAAACTCATTGACTCTAAAAACTAGTCGAGACTGGCTTCCTCCTTTTCAACTTCAAAGCTTGTATTTAGATTCTTGGCATTTGGGGCTTGAACTGCCTTCATGGCTTCGAACACAAACACAATTGCTGGAGCTAAGCCTATCGGGTACAGGAATTTCAGGTACCATTCCGAATTGGTGTTGGAACTTTTCTTCCGCACTAGTTTTCCTGGATCTGTCCAACAATCAATTACATGGGGAGATTCAATATATAAATGTTGGCGCCCCATTCTCAATAATTGACCTAAGTTCAAACCAGTTCAACGGTTCATTGCCTCTTGTCTCCTCCACTATAGAACTACTAGATCTTTCGAATTCTTCATTTTCTGGATCTCTGTTCCACTTCTTTTGTGCTAGGATGGACATACCAAAAGCGCTCTATTTTCTTCATCTAGGGAACAATCATCTCAGTGGTGAAATTCCTGATTGTTGGATGAATTGGCTTAATTTGCATGCCATAACATTAGGTAACAACAATTTGACTGGAAAAATTCCAAGCTCCATTGGACACTTGCACATTCTGGAATCATTGCAGTTGCGCAACAATCACCTTTCTGGAGAACTACCTCAATCCTTGCAGAACTGTACACAATTGTTAGTAGTTGACCTTGGTAAAAATAAGCTCTCTGGAGGCTTGCCTATATGGATGGGGAAAAGCTTTCCAAACTTGGTGGTTCTTAGCCTTCGGTCAAATATGTTTCAAGGAGTCATTTCGGATCAACTTTGTAATATAAGCCATCTCAAAATCTTGGACTTGGCAGATAATGTTCTCTCAGGAACAATACCGAGATGCTTCGGCAACTTTAGTGGAATTGCAAACTCGTCAATGTCAGATGCTTTCGCTACTTATGTTGGTAACTACAGACTTGGAATTCGGCAAATTCTTGGAATTGTAGCAAGCATAGATCTTTCTAACAACAACTTATCTGGGGATATTCCTGAGGAACTGACAAATCTCCTCAGTTTGCAAACATTGAATTTATCAGCAAATCTTTTGACCGGAGGAATCCCTTCGATGATCGGTAGATTGAGGCAGTTAGAATCACTTGATTTGTCTACAAACCAACTTTCTGGTGAAATTCCTCCAAGCATAACTAATTTGACGTTTCTGAGTCACTTGAACTTGTCTCACAACAGTCTGACAGGACAGATTCCACAAAGCACTCAGCTTCTGAGTCTTGATGAGTCCAGCTTTGTCGGCAATGAACTTTGCGGACCTCCACTCAGCAAGGATTGCAGTGCAAACAAGGCGATGCCACCAACACATGATGGGCAAGACAAAGGATATGATTTACTGGAAGATGAATGGTTCTACCTGAGCTTGGGATTGGGATTCATGGTTGGTTTTTGGTGTATACTTGGTTCTTTGCTGGTAAACATGCCATGGAGCTTTGCTTTTTCACGATTCCTCAGTAGCATTGTGCTTAAACTTTACGCTGTAATTGTTAAATATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

956

Amino Acids

105.36

Weight (kDa)

5.47

Isoelectric Point (pI)

34.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 72 1.2e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 102 - 262 4e-07 Leucine-rich repeat region
LRR_8 PF13855 282 - 340 2.2e-08 Leucine rich repeat
LRR_14 PF23598 305 - 504 8.1e-17 Leucine-rich repeat region
LRR_8 PF13855 380 - 436 4.7e-07 Leucine rich repeat
LRR_8 PF13855 402 - 462 2.9e-06 Leucine rich repeat
LRR_8 PF13855 770 - 827 8.7e-07 Leucine rich repeat
LRR_14 PF23598 784 - 849 8.2e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 164
Acc16I TGCGCA 1 cut(s) 1952
Acc36I ACCTGC 1 cut(s) 164
Acc65I GGTACC 1 cut(s) 1535
AccB1I GGYRCC 2 cut(s) 1535, 1634
AccI GTMKAC 2 cut(s) 2468, 2767
AccII CGCG 2 cut(s) 237, 557
AciI CCGC 3 cut(s) 613, 1569, 2625
AclWI GGATC 7 cut(s) 17, 140, 364, 1005, 1593, 1750, 2136
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 1902, 2283, 2292, 2389, 2490
AcuI CTGAAG 2 cut(s) 1347, 1348
AcyI GRCGYC 1 cut(s) 1635
AfaI GTAC 4 cut(s) 927, 1522, 1537, 1999
AfeI AGCGCT 1 cut(s) 1788
AfiI CCNNNNNNNGG 5 cut(s) 88, 452, 625, 965, 2734
AflII CTTAAG 1 cut(s) 992
AgeI ACCGGT 1 cut(s) 224
AhlI ACTAGT 3 cut(s) 986, 1397, 1573
AjnI CCWGG 4 cut(s) 82, 549, 964, 1581
AjuI GAANNNNNNNTTGG 2 cut(s) 795, 827
AloI GAACNNNNNNTCC 2 cut(s) 1550, 1582
Alw21I GWGCWC 2 cut(s) 243, 1372
Alw26I GTCTC 8 cut(s) 177, 488, 659, 780, 1250, 1398, 1699, 2544
AlwI GGATC 7 cut(s) 17, 140, 364, 1005, 1593, 1750, 2136
AlwNI CAGNNNCTG 1 cut(s) 2584
Aor51HI AGCGCT 1 cut(s) 1788
AoxI GGCC 1 cut(s) 1264
ApeKI GCWGC 3 cut(s) 595, 825, 901
ApoI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 1902, 2283, 2292, 2389, 2490
ArsI GACNNNNNNTTYG 2 cut(s) 2268, 2300
AseI ATTAAT 1 cut(s) 870
AsiGI ACCGGT 1 cut(s) 224
Asp700I GAANNNNTTC 1 cut(s) 2422
Asp718I GGTACC 1 cut(s) 1535
AspLEI GCGC 3 cut(s) 1637, 1789, 1953
AspS9I GGNCC 4 cut(s) 337, 806, 956, 2627
AsuHPI GGTGA 5 cut(s) 188, 1112, 1838, 1952, 2498
AsuII TTCGAA 3 cut(s) 429, 1483, 1724
AvaII GGWCC 4 cut(s) 337, 806, 956, 2627
AxyI CCTNAGG 1 cut(s) 2352
BalI TGGCCA 1 cut(s) 1266
BanI GGYRCC 2 cut(s) 1535, 1634
BanII GRGCYC 1 cut(s) 243
BbsI GAAGAC 1 cut(s) 1194
Bbv12I GWGCWC 2 cut(s) 243, 1372
BbvI GCAGC 3 cut(s) 582, 837, 888
BccI CCATC 5 cut(s) 710, 1765, 2053, 2157, 2675
BcgI CGANNNNNNTGC 2 cut(s) 883, 917
BciT130I CCWGG 4 cut(s) 84, 551, 966, 1583
BciVI GTATCC 1 cut(s) 932
BcoDI GTCTC 8 cut(s) 177, 488, 659, 780, 1250, 1398, 1699, 2544
BcuI ACTAGT 3 cut(s) 986, 1397, 1573
BfmI CTRYAG 2 cut(s) 1704, 2272
BfoI RGCGCY 2 cut(s) 1638, 1790
BfrI CTTAAG 1 cut(s) 992
BfuAI ACCTGC 1 cut(s) 164
BfuI GTATCC 1 cut(s) 932
BglI GCCNNNNNGGC 1 cut(s) 1477
BglII AGATCT 2 cut(s) 1717, 2317
BisI GCNGC 4 cut(s) 596, 614, 826, 902
BlpI GCTNAGC 1 cut(s) 1508
BlsI GCNGC 4 cut(s) 597, 615, 827, 903
Bme1390I CCNGG 4 cut(s) 84, 551, 966, 1583
Bme18I GGWCC 4 cut(s) 337, 806, 956, 2627
BmgT120I GGNCC 4 cut(s) 337, 806, 956, 2627
BmiI GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
BmrFI CCNGG 4 cut(s) 84, 551, 966, 1583
BmrI ACTGGG 1 cut(s) 461
BmsI GCATC 4 cut(s) 600, 2192, 2236, 2655
BmuI ACTGGG 1 cut(s) 461
BpiI GAAGAC 1 cut(s) 1194
BpmI CTGGAG 4 cut(s) 222, 1523, 1989, 2061
Bpu10I CCTNAGC 1 cut(s) 2729
Bpu1102I GCTNAGC 1 cut(s) 1508
Bpu14I TTCGAA 3 cut(s) 429, 1483, 1724
BsaAI YACGTR 1 cut(s) 473
BsaBI GATNNNNATC 2 cut(s) 1002, 1158
BsaHI GRCGYC 1 cut(s) 1635
BsaI GGTCTC 1 cut(s) 1250
BsaJI CCNNGG 8 cut(s) 82, 247, 358, 802, 1071, 1188, 2020, 2795
BsaWI WCCGGW 2 cut(s) 224, 2411
BsaXI ACNNNNNCTCC 2 cut(s) 225, 255
Bsc4I CCNNNNNNNGG 5 cut(s) 88, 452, 625, 965, 2734
Bse118I RCCGGY 1 cut(s) 224
Bse1I ACTGG 7 cut(s) 205, 456, 599, 1412, 1669, 1900, 2712
Bse21I CCTNAGG 1 cut(s) 2352
Bse3DI GCAATG 3 cut(s) 1682, 1940, 2620
Bse8I GATNNNNATC 2 cut(s) 1002, 1158
BseBI CCWGG 4 cut(s) 84, 551, 966, 1583
BseDI CCNNGG 8 cut(s) 82, 247, 358, 802, 1071, 1188, 2020, 2795
BseGI GGATG 5 cut(s) 702, 1130, 1776, 1851, 2064
BseJI GATNNNNATC 2 cut(s) 1002, 1158
BseLI CCNNNNNNNGG 5 cut(s) 88, 452, 625, 965, 2734
BseMI GCAATG 3 cut(s) 1682, 1940, 2620
BseNI ACTGG 7 cut(s) 205, 456, 599, 1412, 1669, 1900, 2712
BseRI GAGGAG 3 cut(s) 435, 1687, 2360
BseXI GCAGC 3 cut(s) 582, 837, 888
Bsh1236I CGCG 2 cut(s) 237, 557
BshFI GGCC 1 cut(s) 1266
BshNI GGYRCC 2 cut(s) 1535, 1634
BshTI ACCGGT 1 cut(s) 224
BsiHKAI GWGCWC 2 cut(s) 243, 1372
BsiSI CCGG 2 cut(s) 225, 2412
BslFI GGGAC 1 cut(s) 1186
BslI CCNNNNNNNGG 5 cut(s) 88, 452, 625, 965, 2734
BsmAI GTCTC 8 cut(s) 177, 488, 659, 780, 1250, 1398, 1699, 2544
BsmBI CGTCTC 1 cut(s) 488
BsmFI GGGAC 1 cut(s) 1186
BsmI GAATGC 1 cut(s) 369
BsnI GGCC 1 cut(s) 1266
Bso31I GGTCTC 1 cut(s) 1250
Bsp119I TTCGAA 3 cut(s) 429, 1483, 1724
Bsp1286I GDGCHC 2 cut(s) 243, 1372
Bsp1407I TGTACA 1 cut(s) 1997
Bsp1720I GCTNAGC 1 cut(s) 1508
Bsp19I CCATGG 1 cut(s) 2795
BspACI CCGC 3 cut(s) 613, 1569, 2625
BspANI GGCC 1 cut(s) 1266
BspFNI CGCG 2 cut(s) 237, 557
BspLI GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
BspMI ACCTGC 1 cut(s) 164
BspPI GGATC 7 cut(s) 17, 140, 364, 1005, 1593, 1750, 2136
BspT104I TTCGAA 3 cut(s) 429, 1483, 1724
BspT107I GGYRCC 2 cut(s) 1535, 1634
BspTI CTTAAG 1 cut(s) 992
BspTNI GGTCTC 1 cut(s) 1250
BsrDI GCAATG 3 cut(s) 1682, 1940, 2620
BsrFI RCCGGY 1 cut(s) 224
BsrGI TGTACA 1 cut(s) 1997
BsrI ACTGG 7 cut(s) 205, 456, 599, 1412, 1669, 1900, 2712
BssAI RCCGGY 1 cut(s) 224
BssECI CCNNGG 8 cut(s) 82, 247, 358, 802, 1071, 1188, 2020, 2795
BssNAI GTATAC 1 cut(s) 2768
BssNI GRCGYC 1 cut(s) 1635
BssT1I CCWWGG 7 cut(s) 247, 358, 802, 1071, 1188, 2020, 2795
Bst1107I GTATAC 1 cut(s) 2768
Bst2UI CCWGG 4 cut(s) 84, 551, 966, 1583
Bst4CI ACNGT 6 cut(s) 188, 925, 1100, 1679, 1997, 2549
Bst6I CTCTTC 2 cut(s) 277, 1254
BstACI GRCGYC 1 cut(s) 1635
BstAFI CTTAAG 1 cut(s) 992
BstAPI GCANNNNNTGC 1 cut(s) 2646
BstAUI TGTACA 1 cut(s) 1997
BstBAI YACGTR 1 cut(s) 473
BstBI TTCGAA 3 cut(s) 429, 1483, 1724
BstC8I GCNNGC 6 cut(s) 94, 239, 649, 1866, 2048, 2311
BstDSI CCRYGG 1 cut(s) 2795
BstF5I GGATG 5 cut(s) 702, 1130, 1776, 1851, 2064
BstFNI CGCG 2 cut(s) 237, 557
BstH2I RGCGCY 2 cut(s) 1638, 1790
BstHHI GCGC 3 cut(s) 1637, 1789, 1953
BstMAI GTCTC 8 cut(s) 177, 488, 659, 780, 1250, 1398, 1699, 2544
BstMWI GCNNNNNNNGC 8 cut(s) 825, 1459, 1468, 1477, 1861, 2610, 2646, 2660
BstNI CCWGG 4 cut(s) 84, 551, 966, 1583
BstNSI RCATGY 2 cut(s) 1868, 2794
BstSCI CCNGG 4 cut(s) 82, 549, 964, 1581
BstSFI CTRYAG 2 cut(s) 1704, 2272
BstUI CGCG 2 cut(s) 237, 557
BstV1I GCAGC 3 cut(s) 582, 837, 888
BstV2I GAAGAC 1 cut(s) 1194
BstX2I RGATCY 6 cut(s) 369, 997, 1585, 1717, 1742, 2317
BstXI CCANNNNNNTGG 2 cut(s) 200, 2483
BstYI RGATCY 6 cut(s) 369, 997, 1585, 1717, 1742, 2317
BstZ17I GTATAC 1 cut(s) 2768
Bsu36I CCTNAGG 1 cut(s) 2352
BsuI GTATCC 1 cut(s) 932
BsuRI GGCC 1 cut(s) 1266
BtgI CCRYGG 1 cut(s) 2795
BtgZI GCGATG 1 cut(s) 2678
BtsCI GGATG 5 cut(s) 702, 1130, 1776, 1851, 2064
BtsI GCAGTG 2 cut(s) 45, 2656
BtsIMutI CAGTG 5 cut(s) 45, 493, 606, 1828, 2656
BveI ACCTGC 1 cut(s) 164
Cac8I GCNNGC 6 cut(s) 94, 239, 649, 1866, 2048, 2311
CaiI CAGNNNCTG 1 cut(s) 2584
CfoI GCGC 3 cut(s) 1637, 1789, 1953
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 4 cut(s) 337, 806, 956, 2627
CseI GACGC 1 cut(s) 563
Csp6I GTAC 4 cut(s) 926, 1521, 1536, 1998
CspAI ACCGGT 1 cut(s) 224
CspCI CAANNNNNGTGG 6 cut(s) 1742, 1777, 2064, 2099, 2200, 2235
CviQI GTAC 4 cut(s) 926, 1521, 1536, 1998
DinI GGCGCC 1 cut(s) 1636
DraI TTTAAA 1 cut(s) 1356
EaeI YGGCCR 1 cut(s) 1264
Eam1104I CTCTTC 2 cut(s) 277, 1254
EarI CTCTTC 2 cut(s) 277, 1254
Ecl136II GAGCTC 1 cut(s) 241
Eco130I CCWWGG 7 cut(s) 247, 358, 802, 1071, 1188, 2020, 2795
Eco24I GRGCYC 1 cut(s) 243
Eco31I GGTCTC 1 cut(s) 1250
Eco47I GGWCC 4 cut(s) 337, 806, 956, 2627
Eco47III AGCGCT 1 cut(s) 1788
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 2 cut(s) 1347, 1348
Eco81I CCTNAGG 1 cut(s) 2352
EcoICRI GAGCTC 1 cut(s) 241
EcoRI GAATTC 2 cut(s) 1726, 2283
EcoRII CCWGG 4 cut(s) 82, 549, 964, 1581
EcoT14I CCWWGG 7 cut(s) 247, 358, 802, 1071, 1188, 2020, 2795
EcoT38I GRGCYC 1 cut(s) 243
EgeI GGCGCC 1 cut(s) 1636
EheI GGCGCC 1 cut(s) 1636
ErhI CCWWGG 7 cut(s) 247, 358, 802, 1071, 1188, 2020, 2795
Esp3I CGTCTC 1 cut(s) 488
FaqI GGGAC 1 cut(s) 1186
FblI GTMKAC 2 cut(s) 2468, 2767
Fnu4HI GCNGC 4 cut(s) 596, 614, 826, 902
FokI GGATG 5 cut(s) 689, 1117, 1783, 1858, 2071
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 4 cut(s) 596, 614, 826, 902
FspI TGCGCA 1 cut(s) 1952
GlaI GCGC 3 cut(s) 1636, 1788, 1952
GluI GCNGC 4 cut(s) 596, 614, 826, 902
GsuI CTGGAG 4 cut(s) 222, 1523, 1989, 2061
HaeII RGCGCY 2 cut(s) 1638, 1790
HaeIII GGCC 1 cut(s) 1266
HapII CCGG 2 cut(s) 225, 2412
HgaI GACGC 1 cut(s) 563
HhaI GCGC 3 cut(s) 1637, 1789, 1953
Hin1I GRCGYC 1 cut(s) 1635
Hin6I GCGC 3 cut(s) 1635, 1787, 1951
HinP1I GCGC 3 cut(s) 1635, 1787, 1951
HincII GTYRAC 1 cut(s) 2017
HindII GTYRAC 1 cut(s) 2017
HindIII AAGCTT 3 cut(s) 424, 1432, 2068
HpaII CCGG 2 cut(s) 225, 2412
HphI GGTGA 5 cut(s) 188, 1112, 1838, 1952, 2498
Hpy166II GTNNAC 5 cut(s) 2000, 2017, 2469, 2768, 2788
Hpy8I GTNNAC 5 cut(s) 2000, 2017, 2469, 2768, 2788
HpyCH4III ACNGT 6 cut(s) 188, 925, 1100, 1679, 1997, 2549
HpyCH4IV ACGT 3 cut(s) 472, 481, 2516
HpyF10VI GCNNNNNNNGC 8 cut(s) 825, 1459, 1468, 1477, 1861, 2610, 2646, 2660
HpySE526I ACGT 3 cut(s) 472, 481, 2516
Hsp92I GRCGYC 1 cut(s) 1635
HspAI GCGC 3 cut(s) 1635, 1787, 1951
KasI GGCGCC 1 cut(s) 1634
KpnI GGTACC 1 cut(s) 1539
LmnI GCTCC 7 cut(s) 17, 246, 621, 883, 1504, 1916, 2799
Lsp1109I GCAGC 3 cut(s) 582, 837, 888
LweI GCATC 4 cut(s) 600, 2192, 2236, 2655
MaeII ACGT 3 cut(s) 472, 481, 2516
MaeIII GTNAC 7 cut(s) 220, 227, 254, 344, 1880, 2267, 2525
MboII GAAGA 7 cut(s) 264, 1194, 1241, 1557, 1722, 1790, 2723
MfeI CAATTG 2 cut(s) 1496, 2003
MflI RGATCY 6 cut(s) 369, 997, 1585, 1717, 1742, 2317
MhlI GDGCHC 2 cut(s) 243, 1372
MlsI TGGCCA 1 cut(s) 1266
MluNI TGGCCA 1 cut(s) 1266
Mly113I GGCGCC 1 cut(s) 1635
MlyI GAGTC 7 cut(s) 1004, 1220, 1381, 2127, 2533, 2596, 2606
MmeI TCCRAC 4 cut(s) 522, 1535, 1617, 1823
Mox20I TGGCCA 1 cut(s) 1266
MroXI GAANNNNTTC 1 cut(s) 2422
MscI TGGCCA 1 cut(s) 1266
MslI CAYNNNNRTG 1 cut(s) 1821
Msp20I TGGCCA 1 cut(s) 1266
MspCI CTTAAG 1 cut(s) 992
MspI CCGG 2 cut(s) 225, 2412
MspR9I CCNGG 4 cut(s) 84, 551, 966, 1583
MunI CAATTG 2 cut(s) 1496, 2003
Mva1269I GAATGC 1 cut(s) 369
MvaI CCWGG 4 cut(s) 84, 551, 966, 1583
MvnI CGCG 2 cut(s) 237, 557
MwoI GCNNNNNNNGC 8 cut(s) 825, 1459, 1468, 1477, 1861, 2610, 2646, 2660
NarI GGCGCC 1 cut(s) 1635
NcoI CCATGG 1 cut(s) 2795
NlaIV GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
NmuCI GTSAC 2 cut(s) 227, 2525
NsbI TGCGCA 1 cut(s) 1952
NspI RCATGY 2 cut(s) 1868, 2794
NspV TTCGAA 3 cut(s) 429, 1483, 1724
PaeI GCATGC 1 cut(s) 1868
PaqCI CACCTGC 1 cut(s) 164
PcsI WCGNNNNNNNCGW 1 cut(s) 478
PctI GAATGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 2422
PfoI TCCNGGA 1 cut(s) 1581
PinAI ACCGGT 1 cut(s) 224
PkrI GCNGC 4 cut(s) 597, 615, 827, 903
PleI GAGTC 7 cut(s) 1004, 1219, 1381, 2126, 2532, 2595, 2605
PluTI GGCGCC 1 cut(s) 1638
PpsI GAGTC 7 cut(s) 1004, 1219, 1381, 2126, 2532, 2595, 2605
Ppu21I YACGTR 1 cut(s) 473
PshBI ATTAAT 1 cut(s) 870
Psp124BI GAGCTC 1 cut(s) 243
Psp6I CCWGG 4 cut(s) 82, 549, 964, 1581
PspGI CCWGG 4 cut(s) 82, 549, 964, 1581
PspN4I GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
PspPI GGNCC 4 cut(s) 337, 806, 956, 2627
PsrI GAACNNNNNNTAC 2 cut(s) 2758, 2790
PstNI CAGNNNCTG 1 cut(s) 2584
PsuI RGATCY 6 cut(s) 369, 997, 1585, 1717, 1742, 2317
RsaI GTAC 4 cut(s) 927, 1522, 1537, 1999
RsaNI GTAC 4 cut(s) 926, 1521, 1536, 1998
RseI CAYNNNNRTG 1 cut(s) 1821
SacI GAGCTC 1 cut(s) 243
SatI GCNGC 4 cut(s) 596, 614, 826, 902
Sau96I GGNCC 4 cut(s) 337, 806, 956, 2627
SchI GAGTC 7 cut(s) 1004, 1220, 1381, 2127, 2533, 2596, 2606
ScrFI CCNGG 4 cut(s) 84, 551, 966, 1583
SduI GDGCHC 2 cut(s) 243, 1372
SfaNI GCATC 4 cut(s) 600, 2192, 2236, 2655
SfcI CTRYAG 2 cut(s) 1704, 2272
SfoI GGCGCC 1 cut(s) 1636
SfuI TTCGAA 3 cut(s) 429, 1483, 1724
SinI GGWCC 4 cut(s) 337, 806, 956, 2627
SmiMI CAYNNNNRTG 1 cut(s) 1821
SmlI CTYRAG 1 cut(s) 992
SmoI CTYRAG 1 cut(s) 992
SpeI ACTAGT 3 cut(s) 986, 1397, 1573
SphI GCATGC 1 cut(s) 1868
SsiI CCGC 3 cut(s) 613, 1569, 2625
SspDI GGCGCC 1 cut(s) 1634
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 4 cut(s) 82, 549, 964, 1581
StyI CCWWGG 7 cut(s) 247, 358, 802, 1071, 1188, 2020, 2795
TaaI ACNGT 6 cut(s) 188, 925, 1100, 1679, 1997, 2549
TaiI ACGT 3 cut(s) 475, 484, 2519
TaqI TCGA 8 cut(s) 429, 464, 708, 1008, 1402, 1483, 1724, 2426
TaqII GACCGA 1 cut(s) 2088
TatI WGTACW 1 cut(s) 1997
TauI GCSGC 1 cut(s) 616
TscAI CASTG 5 cut(s) 52, 493, 606, 1828, 2656
TseFI GTSAC 2 cut(s) 227, 2525
TseI GCWGC 3 cut(s) 595, 825, 901
Tsp45I GTSAC 2 cut(s) 227, 2525
TspRI CASTG 5 cut(s) 52, 493, 606, 1828, 2656
Vha464I CTTAAG 1 cut(s) 992
VpaK11BI GGWCC 4 cut(s) 337, 806, 956, 2627
VspI ATTAAT 1 cut(s) 870
XapI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 1902, 2283, 2292, 2389, 2490
XceI RCATGY 2 cut(s) 1868, 2794
XmiI GTMKAC 2 cut(s) 2468, 2767
XmnI GAANNNNTTC 1 cut(s) 2422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.