pycom15g38750

Leucine Rich Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0000281
Physical Location & Seq
Forward (+)
38509828 .. 38514860
5033 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38750.1

Sequence Viewer

Length: 2835 bp
ATGGATAATCCCATGCGAGTTGTTTCACTTCTCAGATTTCTAAGCATTGTAATAACTATTAGCATTTGCTCATGCAATGGCAATCTGATCAGTGCGCCTTGCAAGGAATATGAGAGACAATCACTTTTGATGTTGAAGCAAGACCTCAAGGATCCTTCAAACCGGCTTTCATCTTGGGTTGGCAGCGAAGGAGACTGCTGCAACTGGACTGGAGTTATCTGCGATAAGAAAACCGGTCATGTCTGCGAGCTCCACCTTGGGAATTATTATTTACATGAGGAATTTTCAAGTGAGAGTTTGTCCTTGGGTGGTAAGTTAAATCCTTCTCTGCTCAATTTAAAGCATCTTAGCTACCTGGACCTATACGGAAATGATTTTGAAGGAATACAGATTCCTAGCTTCTTAGGTTCGTTGAAAAGTTTAACATATCTCAACCTTTCAGAAGCAAGGTTTGGAGGAACAATTCCTCCTCAACTAGGAAACCTCTCGAGTCTTCGCACTCTTGCTCTGTTTGATAACAATTTTGTAGTTGAGAACCTTCAATGGATTTCTGGCCTTTCTCGTTTGCAACACCTGGATATTGCTGCTATAGATCTTAGCAAAGTATCACATTGGTTGCAGGGGACAAGCACACTTCCCTCTCAGCTGGTAGAACTATATATGGCTGAATGTGATCTAGGTGTCCTACCAGGCGGAATTTCGAACATGACTAGTCTTCGAGTTCTTGATCTCGATTACAACTCTATCAGTTCTATAATTCCCAAATGGTTGTATACTTTTAGCAATCTTGAAACACTAGTTCTTTCAGAAAATAACTTTCATGGTGAAATTTCAAGTTCCATTGGAAACTTAACAGCCCTTGTCAATCTTGACACATCAGACAACCAACTTGATGGGAAAATCCCAAACTCATTGGGAAACCTTTGTAAGCTGATGTTTCTCGACTTTTCCGGGAACAATTTCAGCGGAAGCATTTCAGAAATATTTGAAACCTTGTCTACATGCAGTTCAGGTCGCATTGAGTTTTTACGTCTATCAGATAATAATCTTTCAGGTCATCTGTCTCAGCTTGGTAACTTCAAAAATTTAGGCTCGCTTTACTTTTCAAGTAATTCAATATCAGGTCCAATTCCAGTGTCCTTGGGAAATCTGTCATGCTTAGAAGTTTTGGACATTGGTAACAATCAATTAGAGGGTGTTGTCTCCGAAGTTCATTTCACCAATCTTACAAAACTGAAATACTTTTCTGCGAGCGAAAATTCGTTGACTCTGAAAACTAGTCCAGATTGGCTTCCTCCCTTCCAATTATACACCTTGTTTCTAAATTCTTGGCATCTAGAGCCATCAGAGTTGCCTGCATGGCTTCAAACTCAAACAAAACTGTATGCTCTTAACCTGTCAAATACAGCTCTTTCAGGTATCATTCCTACCTGGTTTTGGAACTTTTCTTCCCCTGGATTACAACTTTTGGATCTCTCTTACAATCAATTGTACGGAAAAGTTCCGAATATAGATTCTAGATCTTCAGAAGTAATTAACCTAGGTTCTAACCAGTTCCACGGTTCATTACCTCTATTTTCTTCCCACATAACTACACTAGATCTTTCCAACTCATCATTTTCCGGAACTCTGTTTCATTTCTTGTGTGACAAGACTGATGGGCCAAAACAACTTGAAATTCTTCAGCTTCAAGACAATTTTCTCAACGGAGAAATTCCTGACTGTTTGGACAATCTGCAAAACTTGACAGTTCTCAACTTAGAAAACAACAGTTTGGGTGGGAACATTCCAGCCTCCGTTGGGCACTTAGGACTCCTCCAATCGTTGCACTTGCGCAATAATCACTTATCTGGAGAAGTACCTACTTCCCTACAAAAATGTGAGTCCTTGGTCCTTCTTGACCTTCACAGAAATGAATTTGTTGGAAGCATACCAACATGGATTGGTAAAAGCCTTTCACATTTGAGAATTCTCAACCTCCGTTCGAACATGCTTCACAACAACATTCCTCATGAACTATGCAGTCTCCAAAATCTCCAGATCCTGGACCTCGCGGACAACCACCTTTCCGGAGCAATACCAACATGTTTCAAGAATTTCACAGCCATGGCAAATTTTTCAAACTCGAGAGACCCCATTGTGTTCTCCTCTATATCATTTGATGATGATGAAACTTCTTTCCAGTACAACTACATAGAGAATGTAATCTTGGTGAGAAAAGGTAGGGAGGTGGAGTACAACAAAATACTTACTTTGGTGACAAGCTTGGACCTTTCAGACAACTTTATATCCGGAGAGATCCCCAAAGAGCTGACCATCCTCATCTGTTTGCAATCATTCAACTTATCAGGAAATCTTTTGGCTGGAAACATCCCTTCAAAGATTGGTGATATGAGATGGTTAGAATCTCTCGATTTCTCGAGGAACAAACTTACCGGTCAGATTTCTCCAAGCATGTCCAAGTTAACATTTCTAAGCAATTTGAACTTATCCTACAACTATCTGACAGGACAGATTCCGGAAAGCACACAACTTCAGAGCCTTGATCGGTCAAGTTTCTTTGGCAATAAACTTTGTGGACCTCCACTGGAGAAGTGCAGCACAAACCATGGTGGGAGTTCGGTTTCATCGGGTGATCAAAAAAAGGGAGGAATTGGTCGTTTACTAGAAGACGGTTGGTTCGATCTGAGCTTGGGACTAGGCTTAAGGACCCAGAAGCATGCATTGCCACCAGAGTATTGCGATAAGCATTCAATTCTAACCTATGTATTCCTGCTGCTACATCCTCTTTTAGTGGAAGGGAAAAGCTTTCATGCGCATACTTTTCCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

945

Amino Acids

104.45

Weight (kDa)

5.31

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 37 - 75 5.3e-13 Leucine rich repeat N-terminal domain
LRR_14 PF23598 109 - 196 2e-06 Leucine-rich repeat region
LRR_8 PF13855 215 - 273 1.2e-07 Leucine rich repeat
LRR_14 PF23598 222 - 439 1.5e-12 Leucine-rich repeat region
LRR_8 PF13855 557 - 616 3.5e-06 Leucine rich repeat
LRR_14 PF23598 622 - 699 5.1e-06 Leucine-rich repeat region
LRR_8 PF13855 629 - 689 7.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 1835, 2817
AccB7I CCANNNNNTGG 1 cut(s) 2044
AccI GTMKAC 2 cut(s) 773, 998
AccII CGCG 1 cut(s) 2054
AccIII TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
AciI CCGC 3 cut(s) 693, 966, 2054
AclWI GGATC 5 cut(s) 146, 159, 1479, 2035, 2293
AcuI CTGAAG 3 cut(s) 1509, 1667, 2519
AfaI GTAC 4 cut(s) 1493, 1860, 2186, 2237
AfiI CCNNNNNNNGG 4 cut(s) 476, 1437, 1800, 2044
AflII CTTAAG 1 cut(s) 2704
AflIII ACRYGT 1 cut(s) 2084
AgeI ACCGGT 2 cut(s) 233, 2435
AhlI ACTAGT 3 cut(s) 710, 796, 1277
AjnI CCWGG 6 cut(s) 354, 573, 688, 1430, 1453, 2043
AjuI GAANNNNNNNTTGG 4 cut(s) 435, 467, 2192, 2224
AloI GAACNNNNNNTCC 4 cut(s) 451, 483, 1433, 1465
Alw21I GWGCWC 1 cut(s) 252
Alw26I GTCTC 6 cut(s) 109, 186, 1068, 1207, 2030, 2124
AlwI GGATC 5 cut(s) 146, 159, 1479, 2035, 2293
AlwNI CAGNNNCTG 1 cut(s) 2044
Ama87I CYCGRG 3 cut(s) 487, 2125, 2419
Aor13HI TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
AoxI GGCC 2 cut(s) 553, 1661
ApeKI GCWGC 5 cut(s) 183, 198, 584, 2598, 2776
ArsI GACNNNNNNTTYG 2 cut(s) 2663, 2695
AsiGI ACCGGT 2 cut(s) 233, 2435
Asp700I GAANNNNTTC 3 cut(s) 959, 973, 1680
AspA2I CCTAGG 1 cut(s) 1540
AspLEI GCGC 3 cut(s) 97, 1836, 2818
AspS9I GGNCC 8 cut(s) 358, 1124, 1661, 1891, 2047, 2269, 2579, 2709
AsuC2I CCSGG 1 cut(s) 952
AsuHPI GGTGA 6 cut(s) 836, 1210, 2224, 2269, 2399, 2645
AsuII TTCGAA 2 cut(s) 701, 1985
AvaI CYCGRG 3 cut(s) 487, 2125, 2419
AvaII GGWCC 7 cut(s) 358, 1124, 1891, 2047, 2269, 2579, 2709
AvrII CCTAGG 1 cut(s) 1540
BaeGI GKGCMC 1 cut(s) 1806
BamHI GGATCC 1 cut(s) 151
BanII GRGCYC 1 cut(s) 252
BbsI GAAGAC 3 cut(s) 485, 707, 2676
Bbv12I GWGCWC 1 cut(s) 252
BbvI GCAGC 5 cut(s) 185, 195, 571, 2610, 2763
BccI CCATC 5 cut(s) 887, 1351, 1652, 2324, 2391
BciT130I CCWGG 6 cut(s) 356, 575, 690, 1432, 1455, 2045
BclI TGATCA 2 cut(s) 87, 2635
BcnI CCSGG 1 cut(s) 952
BcoDI GTCTC 6 cut(s) 109, 186, 1068, 1207, 2030, 2124
BcuI ACTAGT 3 cut(s) 710, 796, 1277
BfmI CTRYAG 1 cut(s) 588
BfrI CTTAAG 1 cut(s) 2704
BglI GCCNNNNNGGC 1 cut(s) 1360
BglII AGATCT 3 cut(s) 592, 1520, 1600
BisI GCNGC 5 cut(s) 184, 199, 585, 2599, 2777
BlnI CCTAGG 1 cut(s) 1540
BlsI GCNGC 5 cut(s) 185, 200, 586, 2600, 2778
Bme1390I CCNGG 7 cut(s) 356, 575, 690, 952, 1432, 1455, 2045
Bme18I GGWCC 7 cut(s) 358, 1124, 1891, 2047, 2269, 2579, 2709
BmeT110I CYCGRG 3 cut(s) 487, 2125, 2419
BmgT120I GGNCC 8 cut(s) 358, 1124, 1661, 1891, 2047, 2269, 2579, 2709
BmiI GGNNCC 2 cut(s) 153, 2711
BmrFI CCNGG 7 cut(s) 356, 575, 690, 952, 1432, 1455, 2045
BmsI GCATC 2 cut(s) 352, 1342
BpiI GAAGAC 3 cut(s) 485, 707, 2676
BpmI CTGGAG 4 cut(s) 231, 1872, 2021, 2609
Bpu14I TTCGAA 2 cut(s) 701, 1985
BpuEI CTTGAG 1 cut(s) 131
BpuMI CCSGG 1 cut(s) 952
BsaBI GATNNNNATC 1 cut(s) 1044
BsaI GGTCTC 1 cut(s) 2124
BsaJI CCNNGG 9 cut(s) 256, 303, 1140, 1453, 1540, 1558, 1887, 2106, 2608
BsaWI WCCGGW 6 cut(s) 233, 1622, 2069, 2291, 2435, 2518
BsaXI ACNNNNNCTCC 4 cut(s) 451, 481, 2219, 2249
Bsc4I CCNNNNNNNGG 4 cut(s) 476, 1437, 1800, 2044
Bse118I RCCGGY 3 cut(s) 162, 233, 2435
Bse1I ACTGG 6 cut(s) 209, 214, 1133, 1552, 2182, 2592
Bse3DI GCAATG 2 cut(s) 82, 2723
Bse8I GATNNNNATC 1 cut(s) 1044
BseAI TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
BseBI CCWGG 6 cut(s) 356, 575, 690, 1432, 1455, 2045
BseDI CCNNGG 9 cut(s) 256, 303, 1140, 1453, 1540, 1558, 1887, 2106, 2608
BseGI GGATG 3 cut(s) 2316, 2370, 2782
BseJI GATNNNNATC 1 cut(s) 1044
BseLI CCNNNNNNNGG 4 cut(s) 476, 1437, 1800, 2044
BseMI GCAATG 2 cut(s) 82, 2723
BseMII CTCAG 4 cut(s) 46, 656, 1079, 2678
BseNI ACTGG 6 cut(s) 209, 214, 1133, 1552, 2182, 2592
BseRI GAGGAG 3 cut(s) 459, 1805, 2137
BseSI GKGCMC 1 cut(s) 1806
BseXI GCAGC 5 cut(s) 185, 195, 571, 2610, 2763
BsgI GTGCAG 1 cut(s) 2617
Bsh1236I CGCG 1 cut(s) 2054
BshFI GGCC 2 cut(s) 555, 1663
BshTI ACCGGT 2 cut(s) 233, 2435
BsiHKAI GWGCWC 1 cut(s) 252
BsiHKCI CYCGRG 3 cut(s) 487, 2125, 2419
BsiSI CCGG 8 cut(s) 163, 234, 951, 1623, 2070, 2292, 2436, 2519
BslFI GGGAC 2 cut(s) 637, 2709
BslI CCNNNNNNNGG 4 cut(s) 476, 1437, 1800, 2044
BsmAI GTCTC 6 cut(s) 109, 186, 1068, 1207, 2030, 2124
BsmFI GGGAC 2 cut(s) 637, 2709
BsmI GAATGC 1 cut(s) 2749
BsnI GGCC 2 cut(s) 555, 1663
Bso31I GGTCTC 1 cut(s) 2124
BsoBI CYCGRG 3 cut(s) 487, 2125, 2419
Bsp119I TTCGAA 2 cut(s) 701, 1985
Bsp1286I GDGCHC 2 cut(s) 252, 1806
Bsp13I TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
Bsp19I CCATGG 2 cut(s) 2106, 2608
BspACI CCGC 3 cut(s) 693, 966, 2054
BspANI GGCC 2 cut(s) 555, 1663
BspCNI CTCAG 4 cut(s) 45, 655, 1078, 2679
BspEI TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
BspFNI CGCG 1 cut(s) 2054
BspHI TCATGA 1 cut(s) 2011
BspLI GGNNCC 2 cut(s) 153, 2711
BspPI GGATC 5 cut(s) 146, 159, 1479, 2035, 2293
BspT104I TTCGAA 2 cut(s) 701, 1985
BspTI CTTAAG 1 cut(s) 2704
BspTNI GGTCTC 1 cut(s) 2124
BsrDI GCAATG 2 cut(s) 82, 2723
BsrFI RCCGGY 3 cut(s) 162, 233, 2435
BsrI ACTGG 6 cut(s) 209, 214, 1133, 1552, 2182, 2592
BssAI RCCGGY 3 cut(s) 162, 233, 2435
BssECI CCNNGG 9 cut(s) 256, 303, 1140, 1453, 1540, 1558, 1887, 2106, 2608
BssNAI GTATAC 1 cut(s) 774
BssT1I CCWWGG 7 cut(s) 256, 303, 1140, 1540, 1887, 2106, 2608
Bst1107I GTATAC 1 cut(s) 774
Bst2UI CCWGG 6 cut(s) 356, 575, 690, 1432, 1455, 2045
Bst4CI ACNGT 6 cut(s) 1383, 1562, 1724, 1750, 1772, 2675
BstAFI CTTAAG 1 cut(s) 2704
BstAPI GCANNNNNTGC 1 cut(s) 2725
BstBI TTCGAA 2 cut(s) 701, 1985
BstC8I GCNNGC 5 cut(s) 248, 1094, 1252, 1356, 2721
BstDSI CCRYGG 3 cut(s) 1558, 2106, 2608
BstENI CCTNNNNNAGG 1 cut(s) 474
BstF5I GGATG 3 cut(s) 2316, 2370, 2782
BstFNI CGCG 1 cut(s) 2054
BstHHI GCGC 3 cut(s) 97, 1836, 2818
BstMAI GTCTC 6 cut(s) 109, 186, 1068, 1207, 2030, 2124
BstMWI GCNNNNNNNGC 3 cut(s) 1339, 1360, 2725
BstNI CCWGG 6 cut(s) 356, 575, 690, 1432, 1455, 2045
BstNSI RCATGY 5 cut(s) 1005, 1993, 2088, 2458, 2723
BstSCI CCNGG 7 cut(s) 354, 573, 688, 950, 1430, 1453, 2043
BstSFI CTRYAG 1 cut(s) 588
BstSLI GKGCMC 1 cut(s) 1806
BstUI CGCG 1 cut(s) 2054
BstV1I GCAGC 5 cut(s) 185, 195, 571, 2610, 2763
BstV2I GAAGAC 3 cut(s) 485, 707, 2676
BstX2I RGATCY 7 cut(s) 151, 592, 1471, 1520, 1600, 2040, 2298
BstXI CCANNNNNNTGG 1 cut(s) 893
BstYI RGATCY 7 cut(s) 151, 592, 1471, 1520, 1600, 2040, 2298
BstZ17I GTATAC 1 cut(s) 774
BsuRI GGCC 2 cut(s) 555, 1663
BtgI CCRYGG 3 cut(s) 1558, 2106, 2608
BtsCI GGATG 3 cut(s) 2316, 2370, 2782
BtsIMutI CAGTG 3 cut(s) 97, 1140, 2585
Cac8I GCNNGC 5 cut(s) 248, 1094, 1252, 1356, 2721
CaiI CAGNNNCTG 1 cut(s) 2044
CciI TCATGA 1 cut(s) 2011
CfoI GCGC 3 cut(s) 97, 1836, 2818
Cfr10I RCCGGY 3 cut(s) 162, 233, 2435
Cfr13I GGNCC 8 cut(s) 358, 1124, 1661, 1891, 2047, 2269, 2579, 2709
CsiI ACCWGGT 1 cut(s) 1430
Csp6I GTAC 4 cut(s) 1492, 1859, 2185, 2236
CspAI ACCGGT 2 cut(s) 233, 2435
CviQI GTAC 4 cut(s) 1492, 1859, 2185, 2236
DraI TTTAAA 1 cut(s) 339
EciI GGCGGA 1 cut(s) 708
Ecl136II GAGCTC 1 cut(s) 250
Eco130I CCWWGG 7 cut(s) 256, 303, 1140, 1540, 1887, 2106, 2608
Eco24I GRGCYC 1 cut(s) 252
Eco31I GGTCTC 1 cut(s) 2124
Eco47I GGWCC 7 cut(s) 358, 1124, 1891, 2047, 2269, 2579, 2709
Eco53kI GAGCTC 1 cut(s) 250
Eco57I CTGAAG 3 cut(s) 1509, 1667, 2519
Eco88I CYCGRG 3 cut(s) 487, 2125, 2419
EcoICRI GAGCTC 1 cut(s) 250
EcoNI CCTNNNNNAGG 1 cut(s) 474
EcoO109I RGGNCCY 1 cut(s) 2709
EcoRI GAATTC 1 cut(s) 1968
EcoRII CCWGG 6 cut(s) 354, 573, 688, 1430, 1453, 2043
EcoT14I CCWWGG 7 cut(s) 256, 303, 1140, 1540, 1887, 2106, 2608
EcoT22I ATGCAT 1 cut(s) 2725
EcoT38I GRGCYC 1 cut(s) 252
ErhI CCWWGG 7 cut(s) 256, 303, 1140, 1540, 1887, 2106, 2608
FaqI GGGAC 2 cut(s) 637, 2709
FbaI TGATCA 2 cut(s) 87, 2635
FblI GTMKAC 2 cut(s) 773, 998
Fnu4HI GCNGC 5 cut(s) 184, 199, 585, 2599, 2777
FokI GGATG 3 cut(s) 2303, 2357, 2769
FriOI GRGCYC 1 cut(s) 252
Fsp4HI GCNGC 5 cut(s) 184, 199, 585, 2599, 2777
FspAI RTGCGCAY 1 cut(s) 2817
FspI TGCGCA 2 cut(s) 1835, 2817
GlaI GCGC 3 cut(s) 96, 1835, 2817
GluI GCNGC 5 cut(s) 184, 199, 585, 2599, 2777
GsuI CTGGAG 4 cut(s) 231, 1872, 2021, 2609
HaeIII GGCC 2 cut(s) 555, 1663
HapII CCGG 8 cut(s) 163, 234, 951, 1623, 2070, 2292, 2436, 2519
HhaI GCGC 3 cut(s) 97, 1836, 2818
Hin6I GCGC 3 cut(s) 95, 1834, 2816
HinP1I GCGC 3 cut(s) 95, 1834, 2816
HincII GTYRAC 2 cut(s) 1266, 2466
HindII GTYRAC 2 cut(s) 1266, 2466
HindIII AAGCTT 2 cut(s) 2263, 2806
HinfI GANTC 8 cut(s) 391, 490, 1267, 1514, 1812, 1883, 2405, 2515
HpaI GTTAAC 1 cut(s) 2466
HpaII CCGG 8 cut(s) 163, 234, 951, 1623, 2070, 2292, 2436, 2519
HphI GGTGA 6 cut(s) 836, 1210, 2224, 2269, 2399, 2645
Hpy166II GTNNAC 6 cut(s) 774, 999, 1266, 2466, 2579, 2663
Hpy8I GTNNAC 6 cut(s) 774, 999, 1266, 2466, 2579, 2663
HpyCH4III ACNGT 6 cut(s) 1383, 1562, 1724, 1750, 1772, 2675
HpyCH4IV ACGT 1 cut(s) 1030
HpyF10VI GCNNNNNNNGC 3 cut(s) 1339, 1360, 2725
HpySE526I ACGT 1 cut(s) 1030
HspAI GCGC 3 cut(s) 95, 1834, 2816
Kpn2I TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
Ksp22I TGATCA 2 cut(s) 87, 2635
KspAI GTTAAC 1 cut(s) 2466
LmnI GCTCC 2 cut(s) 255, 2072
Lsp1109I GCAGC 5 cut(s) 185, 195, 571, 2610, 2763
LweI GCATC 2 cut(s) 352, 1342
MabI ACCWGGT 1 cut(s) 1430
MaeII ACGT 1 cut(s) 1030
MaeIII GTNAC 4 cut(s) 1073, 1178, 1646, 2257
MboII GAAGA 7 cut(s) 485, 707, 1440, 1515, 1572, 1673, 2681
MfeI CAATTG 1 cut(s) 1487
MflI RGATCY 7 cut(s) 151, 592, 1471, 1520, 1600, 2040, 2298
MhlI GDGCHC 2 cut(s) 252, 1806
MlyI GAGTC 4 cut(s) 499, 1261, 1806, 1892
MmeI TCCRAC 2 cut(s) 1632, 1903
Mph1103I ATGCAT 1 cut(s) 2725
MroI TCCGGA 4 cut(s) 1622, 2069, 2291, 2518
MroXI GAANNNNTTC 3 cut(s) 959, 973, 1680
MseI TTAA 8 cut(s) 317, 338, 422, 851, 1392, 1536, 2465, 2705
MslI CAYNNNNRTG 2 cut(s) 1911, 2105
MspA1I CMGCKG 2 cut(s) 646, 966
MspCI CTTAAG 1 cut(s) 2704
MspI CCGG 8 cut(s) 163, 234, 951, 1623, 2070, 2292, 2436, 2519
MspR9I CCNGG 7 cut(s) 356, 575, 690, 952, 1432, 1455, 2045
MunI CAATTG 1 cut(s) 1487
Mva1269I GAATGC 1 cut(s) 2749
MvaI CCWGG 6 cut(s) 356, 575, 690, 1432, 1455, 2045
MvnI CGCG 1 cut(s) 2054
MwoI GCNNNNNNNGC 3 cut(s) 1339, 1360, 2725
NciI CCSGG 1 cut(s) 952
NcoI CCATGG 2 cut(s) 2106, 2608
NlaIV GGNNCC 2 cut(s) 153, 2711
NmuCI GTSAC 2 cut(s) 1646, 2257
NsbI TGCGCA 2 cut(s) 1835, 2817
NsiI ATGCAT 1 cut(s) 2725
NspI RCATGY 5 cut(s) 1005, 1993, 2088, 2458, 2723
NspV TTCGAA 2 cut(s) 701, 1985
PaeI GCATGC 1 cut(s) 2723
PaeR7I CTCGAG 3 cut(s) 487, 2125, 2419
PagI TCATGA 1 cut(s) 2011
PciI ACATGT 1 cut(s) 2084
PcsI WCGNNNNNNNCGW 1 cut(s) 2679
PctI GAATGC 1 cut(s) 2749
PdmI GAANNNNTTC 3 cut(s) 959, 973, 1680
PfeI GAWTC 4 cut(s) 391, 1514, 2405, 2515
PflMI CCANNNNNTGG 1 cut(s) 2044
PfoI TCCNGGA 2 cut(s) 950, 2043
PinAI ACCGGT 2 cut(s) 233, 2435
PkrI GCNGC 5 cut(s) 185, 200, 586, 2600, 2778
PleI GAGTC 4 cut(s) 498, 1261, 1806, 1891
PpsI GAGTC 4 cut(s) 498, 1261, 1806, 1891
PpuMI RGGWCCY 1 cut(s) 2709
PscI ACATGT 1 cut(s) 2084
Psp124BI GAGCTC 1 cut(s) 252
Psp5II RGGWCCY 1 cut(s) 2709
Psp6I CCWGG 6 cut(s) 354, 573, 688, 1430, 1453, 2043
PspGI CCWGG 6 cut(s) 354, 573, 688, 1430, 1453, 2043
PspN4I GGNNCC 2 cut(s) 153, 2711
PspPI GGNCC 8 cut(s) 358, 1124, 1661, 1891, 2047, 2269, 2579, 2709
PspPPI RGGWCCY 1 cut(s) 2709
PsrI GAACNNNNNNTAC 2 cut(s) 2477, 2509
PstNI CAGNNNCTG 1 cut(s) 2044
PsuI RGATCY 7 cut(s) 151, 592, 1471, 1520, 1600, 2040, 2298
PvuII CAGCTG 1 cut(s) 646
RsaI GTAC 4 cut(s) 1493, 1860, 2186, 2237
RsaNI GTAC 4 cut(s) 1492, 1859, 2185, 2236
RseI CAYNNNNRTG 2 cut(s) 1911, 2105
SacI GAGCTC 1 cut(s) 252
SaqAI TTAA 8 cut(s) 317, 338, 422, 851, 1392, 1536, 2465, 2705
SatI GCNGC 5 cut(s) 184, 199, 585, 2599, 2777
Sau96I GGNCC 8 cut(s) 358, 1124, 1661, 1891, 2047, 2269, 2579, 2709
SchI GAGTC 4 cut(s) 499, 1261, 1806, 1892
ScrFI CCNGG 7 cut(s) 356, 575, 690, 952, 1432, 1455, 2045
SduI GDGCHC 2 cut(s) 252, 1806
SexAI ACCWGGT 1 cut(s) 1430
SfaNI GCATC 2 cut(s) 352, 1342
SfcI CTRYAG 1 cut(s) 588
Sfr274I CTCGAG 3 cut(s) 487, 2125, 2419
SfuI TTCGAA 2 cut(s) 701, 1985
SinI GGWCC 7 cut(s) 358, 1124, 1891, 2047, 2269, 2579, 2709
SlaI CTCGAG 3 cut(s) 487, 2125, 2419
SmiMI CAYNNNNRTG 2 cut(s) 1911, 2105
SmlI CTYRAG 5 cut(s) 146, 487, 2125, 2419, 2704
SmoI CTYRAG 5 cut(s) 146, 487, 2125, 2419, 2704
SpeI ACTAGT 3 cut(s) 710, 796, 1277
SphI GCATGC 1 cut(s) 2723
SsiI CCGC 3 cut(s) 693, 966, 2054
SspI AATATT 1 cut(s) 984
SstI GAGCTC 1 cut(s) 252
StyD4I CCNGG 7 cut(s) 354, 573, 688, 950, 1430, 1453, 2043
StyI CCWWGG 7 cut(s) 256, 303, 1140, 1540, 1887, 2106, 2608
TaaI ACNGT 6 cut(s) 1383, 1562, 1724, 1750, 1772, 2675
TaiI ACGT 1 cut(s) 1033
TaqII GACCGA 1 cut(s) 2538
TatI WGTACW 2 cut(s) 2184, 2235
TfiI GAWTC 4 cut(s) 391, 1514, 2405, 2515
Tru1I TTAA 8 cut(s) 317, 338, 422, 851, 1392, 1536, 2465, 2705
Tru9I TTAA 8 cut(s) 317, 338, 422, 851, 1392, 1536, 2465, 2705
TscAI CASTG 3 cut(s) 97, 1140, 2592
TseFI GTSAC 2 cut(s) 1646, 2257
TseI GCWGC 5 cut(s) 183, 198, 584, 2598, 2776
Tsp45I GTSAC 2 cut(s) 1646, 2257
TspGWI ACGGA 5 cut(s) 381, 1509, 1722, 1786, 1970
TspRI CASTG 3 cut(s) 97, 1140, 2592
Van91I CCANNNNNTGG 1 cut(s) 2044
Vha464I CTTAAG 1 cut(s) 2704
VpaK11BI GGWCC 7 cut(s) 358, 1124, 1891, 2047, 2269, 2579, 2709
XagI CCTNNNNNAGG 1 cut(s) 474
XbaI TCTAGA 2 cut(s) 1336, 1517
XceI RCATGY 5 cut(s) 1005, 1993, 2088, 2458, 2723
XhoI CTCGAG 3 cut(s) 487, 2125, 2419
XmaJI CCTAGG 1 cut(s) 1540
XmiI GTMKAC 2 cut(s) 773, 998
XmnI GAANNNNTTC 3 cut(s) 959, 973, 1680
Zsp2I ATGCAT 1 cut(s) 2725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.