pycom11g19100

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000281
Physical Location & Seq
Forward (+)
21377980 .. 21380592
2613 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g19100.1

Sequence Viewer

Length: 2613 bp
ATGTCCATGAGCTCCACCTTGCTGGTAATTATCGATCAAGAAACTGGTGAGGAACATGGTTTGGGTGGTAAGGTAAATCCTTCTCTACTCAATTTAAAGCATCTCAGCTACTTGAACTTGAGCCACAATAATTTTGAAGGACTACAGATTCCTAGCTTTCTAGGTTCTCTTAAAGGTTTAAGATATCTTGACCTCTCGTATGCAGGGTTCAATGGAACCATTCCTCATCAGTTGGGGAATCTCTCGAGTCTGCGTTATCTCGACCTTTCTCACAACTTTGGTTCGATGGTCGAGAATCTCAAATGGCTCTCTGGTCTTTCTCTGTTGAAACATCTTGACATGAGTTCTGTAGATCTTACCAACGCATCTCATTGGTTACAAGAAAATACACTCCCTTCTCTGCTAGTCGAGTTGCATTTGTCTAGCTGCGAACTTTATCACATACCAAGTGGTATTGCGAACTTGACAAGTCTTAAGGTTCTTCATCTGCACCGGAACCATTTCAACTCTACCATACCTAAATGGTTGTACAGTTTGGGCCATCTTGAGTTCCTCTTTCTTTCTCATAATGCTTTCCATGGTGAAATTTCGAGTTCCCTTGGAAACTTGACAACCCTTGTTGATCTTAAATTGGGTAGCAATCAGCTTGAAGGGGAAATCCCAAACTCTTTGGGAAATCTTTGTAAGTTGACTGCTATTGATCTATCATCGAACAATTTTAGGGGGAGGGTATCAGCAATCTTTGAAAGTTTGTCTCGATGTAGTTCTGGTCAAATATATTATTTAGATTTGTTGGATAATAATTTTTCAGGTCATTTATCTGATCAACTTGAAAGTTTCAAAAATTTACGTTATCTTTATCTTTCAAATAATTCAATATCAGGTCCTGTTCCAGTGTCTTTAGGAAATCTATCACTCTTAGAGGAGTTGGCCATTGATAACAATTCATTCGAGGGTGTTGTCTCTGAAGTTCATTTTACTAATCTTACAAGATTGATTAACTTTTTTGCAAATGAGAACTCTTTGACTCTTAAAACCAGCCCAGACTGGCTTCCTCCTTTTCAACTTTCTATCTTGACTTTAAGTTCTTTGCATCTGGACCCATCAGAGTTGCCTGCGTGGCTCAAGAGTCAAAAACATTTGTCGGCTCTTAACATGTCCAATACAGGAATTTCAGGTACCATTCCCATTTGGTTTTGGAACATTTATTCGAATGATGCATATTTTGTGGATCTCTCGCGTAATCAGTTGTCCGGCGAGATTCCAAACATAGTTTCCGCCAACTGGCCAAAACAACAGCGTTTCGATCCCCAAGTTTCAGGAATCCTAATTGACTTAAGGTCTAACCAGTTCAATGGTTCATTGCCTCTTGTGTCTTCGGCAATGTCTACACTTGATCTTTCCAATTCATCATTTTCGGGAACTCTCTCTCACTTACTTTGTGATAGGAGCGATGTACCTAAAAACCTTCTTGTTCTTCATCTTGGCAACAATCTCCTCACTGGAGAAATTCCTGATTGTAGGTTACACTGGCCAAACTTGACAGTTGTGAATTTAGAAGACAACAAGTTGACGGGGAAAATTCCAAGCTCTATCGGGGACCTAATTTCCCTTCAATCTTTGCACTTGCGCAATAATAAGCTATCTGGAGAATTACCTGTGTCCCTACAAAACTGTGAGCAATTGTTACTTCTTGACCTTGGTGGAAACAAGTTTGCTGGAAGCTTTCCATTATGGTTTGGCCAAAGCTTGGTAGTTCTGAGTCTTCGTTCAAATCAGTTCCATGGCGCCATTCCTTATAAGCTTTGTAGTCTCACAAATCTCCAAATCTTGGACCTTGCGCATAACAATATCTCGGGAACGATACCCAGATGTTTCCAAAATTTGTCATCCATGGCCAATACCTCTTCAAGCGAAGGACTTACTAGTATTCAATTCTTGGATGCTTCTTTTTTCGGTTTTGGTCTTTTTGGGGAATCCTACACAGAGACTGCAGTTTTTGTGACCAAAGGTAGAGAAGTGAACTATAACACAATGCTTCGGTTGGTAGCTAGTTTGGACCTTTCCAACAACATGTTAACTGGAGAAATCCCGGAAGAGCTGACCAGCCTCATTAGCTTACAAACGTTGAATTTATCCGATAATCTTTTGACGGGAAGAATACCTTCCAAAATCGGTGATATGAGAATGTTAGAGTCGCTTGATTTGTCCATGAACCAACTTTGTGGCGAAGTTTCTCCTAGCATCTCGAACTTGACATTTCTCAACTATTTGAATTTGTCCTATAACAATCTGATAGGGCAGATTCCGAAGGGCACTCAGCTTCAGAGCTTTGATATGTCTAGTTATGCCGGCAATAAACTTTGCGGACCTCCATTGGAAGAGTGTCACAGTACAAAAGAGGCAATGCCACCTGTAGGTGATGAGAAGCATGGAGAAGGTCATTTACTTGAAGATGGCGGGTTCTATCTGAGTTTGGGGCTTGGATTTGCATTCGGGTTTTGGATTGTTCTTGGTTCATTGTTGTCTAATGTGCCGTGGAGCAATGCACTTTCTCAGTTCCAAAATATCATTGTGAAGAAGCTCTATGCTGTAATCGTTAAACGTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

871

Amino Acids

95.93

Weight (kDa)

5.65

Isoelectric Point (pI)

37.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 29 - 111 1.5e-06 Leucine-rich repeat region
LRR_8 PF13855 34 - 92 1.7e-08 Leucine rich repeat
LRR_14 PF23598 93 - 253 3e-09 Leucine-rich repeat region
LRR_8 PF13855 135 - 191 7.9e-08 Leucine rich repeat
LRR_8 PF13855 512 - 572 7.4e-07 Leucine rich repeat
LRR_8 PF13855 583 - 632 7.2e-06 Leucine rich repeat
LRR_8 PF13855 683 - 741 2.5e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1800
Acc16I TGCGCA 2 cut(s) 1631, 1842
Acc65I GGTACC 1 cut(s) 1178
AccB1I GGYRCC 2 cut(s) 1178, 1787
AccB7I CCANNNNNTGG 2 cut(s) 1750, 1831
AccI GTMKAC 1 cut(s) 1388
AccII CGCG 1 cut(s) 1240
AciI CCGC 3 cut(s) 1278, 2367, 2460
AclI AACGTT 1 cut(s) 2126
AclWI GGATC 2 cut(s) 1239, 1301
AcoI YGGCCR 5 cut(s) 930, 1286, 1532, 1741, 1896
AcsI RAATTY 9 cut(s) 585, 844, 1170, 1509, 1552, 1581, 1882, 2131, 2275
AcuI CTGAAG 2 cut(s) 987, 2309
AcyI GRCGYC 1 cut(s) 1788
AfaI GTAC 4 cut(s) 530, 1180, 1458, 2395
AfiI CCNNNNNNNGG 4 cut(s) 1284, 1750, 1831, 2417
AflII CTTAAG 2 cut(s) 473, 1336
AflIII ACRYGT 2 cut(s) 1155, 2073
AhdI GACNNNNNGTC 1 cut(s) 1339
AhlI ACTAGT 1 cut(s) 1925
AjuI GAANNNNNNNTTGG 2 cut(s) 1258, 1290
Alw21I GWGCWC 1 cut(s) 14
Alw26I GTCTC 4 cut(s) 759, 967, 1817, 1982
AlwI GGATC 2 cut(s) 1239, 1301
AlwNI CAGNNNCTG 2 cut(s) 887, 1991
Ama87I CYCGRG 2 cut(s) 244, 1855
AoxI GGCC 6 cut(s) 538, 930, 1286, 1532, 1741, 1896
ApeKI GCWGC 1 cut(s) 426
ApoI RAATTY 9 cut(s) 585, 844, 1170, 1509, 1552, 1581, 1882, 2131, 2275
Asp700I GAANNNNTTC 2 cut(s) 500, 2164
Asp718I GGTACC 1 cut(s) 1178
AspLEI GCGC 3 cut(s) 1632, 1790, 1843
AspS9I GGNCC 7 cut(s) 538, 884, 1099, 1600, 1834, 2059, 2369
AsuC2I CCSGG 1 cut(s) 2093
AsuHPI GGTGA 4 cut(s) 59, 593, 2189, 2432
AsuII TTCGAA 1 cut(s) 1211
AvaI CYCGRG 2 cut(s) 244, 1855
AvaII GGWCC 6 cut(s) 884, 1099, 1600, 1834, 2059, 2369
BaeGI GKGCMC 1 cut(s) 2318
BalI TGGCCA 5 cut(s) 932, 1288, 1534, 1743, 1898
BanI GGYRCC 2 cut(s) 1178, 1787
BanII GRGCYC 1 cut(s) 14
BarI GAAGNNNNNNTAC 2 cut(s) 2430, 2462
BbsI GAAGAC 3 cut(s) 1368, 1566, 1757
Bbv12I GWGCWC 1 cut(s) 14
BbvI GCAGC 1 cut(s) 413
BccI CCATC 4 cut(s) 280, 549, 1111, 2450
BceAI ACGGC 1 cut(s) 2521
BclI TGATCA 1 cut(s) 823
BcnI CCSGG 1 cut(s) 2093
BcoDI GTCTC 4 cut(s) 759, 967, 1817, 1982
BcuI ACTAGT 1 cut(s) 1925
BfaI CTAG 8 cut(s) 153, 161, 404, 423, 1926, 2052, 2241, 2343
BfmI CTRYAG 4 cut(s) 143, 348, 1992, 2415
BfoI RGCGCY 1 cut(s) 1791
BfrI CTTAAG 2 cut(s) 473, 1336
BglI GCCNNNNNGGC 1 cut(s) 1120
BglII AGATCT 1 cut(s) 352
BisI GCNGC 1 cut(s) 427
BlsI GCNGC 1 cut(s) 428
Bme1390I CCNGG 1 cut(s) 2093
Bme18I GGWCC 6 cut(s) 884, 1099, 1600, 1834, 2059, 2369
BmeRI GACNNNNNGTC 1 cut(s) 1339
BmeT110I CYCGRG 2 cut(s) 244, 1855
BmgT120I GGNCC 7 cut(s) 538, 884, 1099, 1600, 1834, 2059, 2369
BmiI GGNNCC 6 cut(s) 217, 497, 1101, 1180, 1601, 1789
BmrFI CCNGG 1 cut(s) 2093
BmsI GCATC 6 cut(s) 109, 374, 1102, 1207, 1933, 2253
BpiI GAAGAC 3 cut(s) 1368, 1566, 1757
BpmI CTGGAG 3 cut(s) 1524, 1668, 2103
Bpu14I TTCGAA 1 cut(s) 1211
BpuEI CTTGAG 3 cut(s) 139, 566, 1109
BpuMI CCSGG 1 cut(s) 2093
Bsa29I ATCGAT 1 cut(s) 33
BsaHI GRCGYC 1 cut(s) 1788
BsaJI CCNNGG 6 cut(s) 577, 598, 1699, 1783, 1893, 2537
BsaWI WCCGGW 1 cut(s) 492
Bsc4I CCNNNNNNNGG 4 cut(s) 1284, 1750, 1831, 2417
Bse118I RCCGGY 1 cut(s) 2351
Bse1I ACTGG 8 cut(s) 49, 893, 1052, 1289, 1348, 1507, 1535, 2086
Bse3DI GCAATG 4 cut(s) 1361, 1389, 2412, 2551
BseCI ATCGAT 1 cut(s) 33
BseDI CCNNGG 6 cut(s) 577, 598, 1699, 1783, 1893, 2537
BseGI GGATG 2 cut(s) 1889, 1948
BseLI CCNNNNNNNGG 4 cut(s) 1284, 1750, 1831, 2417
BseMI GCAATG 4 cut(s) 1361, 1389, 2412, 2551
BseMII CTCAG 5 cut(s) 118, 1751, 2333, 2462, 2570
BseNI ACTGG 8 cut(s) 49, 893, 1052, 1289, 1348, 1507, 1535, 2086
BseRI GAGGAG 2 cut(s) 938, 1487
BseSI GKGCMC 1 cut(s) 2318
BseXI GCAGC 1 cut(s) 413
BsgI GTGCAG 1 cut(s) 473
Bsh1236I CGCG 1 cut(s) 1240
BshFI GGCC 6 cut(s) 540, 932, 1288, 1534, 1743, 1898
BshNI GGYRCC 2 cut(s) 1178, 1787
BshVI ATCGAT 1 cut(s) 33
BsiHKAI GWGCWC 1 cut(s) 14
BsiHKCI CYCGRG 2 cut(s) 244, 1855
BsiSI CCGG 4 cut(s) 493, 1254, 2093, 2352
BslFI GGGAC 2 cut(s) 1613, 1648
BslI CCNNNNNNNGG 4 cut(s) 1284, 1750, 1831, 2417
BsmAI GTCTC 4 cut(s) 759, 967, 1817, 1982
BsmFI GGGAC 2 cut(s) 1613, 1648
BsmI GAATGC 1 cut(s) 2492
BsnI GGCC 6 cut(s) 540, 932, 1288, 1534, 1743, 1898
BsoBI CYCGRG 2 cut(s) 244, 1855
Bsp119I TTCGAA 1 cut(s) 1211
Bsp1286I GDGCHC 2 cut(s) 14, 2318
Bsp1407I TGTACA 1 cut(s) 528
Bsp143I GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
Bsp19I CCATGG 3 cut(s) 577, 1783, 1893
BspACI CCGC 3 cut(s) 1278, 2367, 2460
BspANI GGCC 6 cut(s) 540, 932, 1288, 1534, 1743, 1898
BspCNI CTCAG 5 cut(s) 117, 1752, 2332, 2463, 2569
BspDI ATCGAT 1 cut(s) 33
BspFNI CGCG 1 cut(s) 1240
BspLI GGNNCC 6 cut(s) 217, 497, 1101, 1180, 1601, 1789
BspMAI CTGCAG 1 cut(s) 1996
BspPI GGATC 2 cut(s) 1239, 1301
BspQI GCTCTTC 1 cut(s) 2091
BspT104I TTCGAA 1 cut(s) 1211
BspT107I GGYRCC 2 cut(s) 1178, 1787
BspTI CTTAAG 2 cut(s) 473, 1336
BsrDI GCAATG 4 cut(s) 1361, 1389, 2412, 2551
BsrFI RCCGGY 1 cut(s) 2351
BsrGI TGTACA 1 cut(s) 528
BsrI ACTGG 8 cut(s) 49, 893, 1052, 1289, 1348, 1507, 1535, 2086
BssAI RCCGGY 1 cut(s) 2351
BssECI CCNNGG 6 cut(s) 577, 598, 1699, 1783, 1893, 2537
BssMI GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
BssNI GRCGYC 1 cut(s) 1788
BssT1I CCWWGG 5 cut(s) 577, 598, 1699, 1783, 1893
Bst4CI ACNGT 4 cut(s) 533, 1546, 1676, 2393
Bst6I CTCTTC 3 cut(s) 1912, 2091, 2376
BstACI GRCGYC 1 cut(s) 1788
BstAFI CTTAAG 2 cut(s) 473, 1336
BstAUI TGTACA 1 cut(s) 528
BstBI TTCGAA 1 cut(s) 1211
BstC8I GCNNGC 2 cut(s) 1116, 2353
BstDEI CTNAG 6 cut(s) 104, 919, 1760, 2319, 2471, 2556
BstDSI CCRYGG 4 cut(s) 577, 1783, 1893, 2537
BstF5I GGATG 2 cut(s) 1889, 1948
BstFNI CGCG 1 cut(s) 1240
BstH2I RGCGCY 1 cut(s) 1791
BstHHI GCGC 3 cut(s) 1632, 1790, 1843
BstKTI GATC 8 cut(s) 37, 355, 625, 703, 826, 1234, 1309, 1399
BstMAI GTCTC 4 cut(s) 759, 967, 1817, 1982
BstMBI GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
BstMWI GCNNNNNNNGC 2 cut(s) 1120, 2115
BstNSI RCATGY 2 cut(s) 1159, 2077
BstSCI CCNGG 1 cut(s) 2091
BstSFI CTRYAG 4 cut(s) 143, 348, 1992, 2415
BstSLI GKGCMC 1 cut(s) 2318
BstUI CGCG 1 cut(s) 1240
BstV1I GCAGC 1 cut(s) 413
BstV2I GAAGAC 3 cut(s) 1368, 1566, 1757
BstX2I RGATCY 2 cut(s) 352, 1231
BstXI CCANNNNNNTGG 3 cut(s) 22, 1355, 2225
BstYI RGATCY 2 cut(s) 352, 1231
Bsu15I ATCGAT 1 cut(s) 33
BsuRI GGCC 6 cut(s) 540, 932, 1288, 1534, 1743, 1898
BsuTUI ATCGAT 1 cut(s) 33
BtgI CCRYGG 4 cut(s) 577, 1783, 1893, 2537
BtgZI GCGATG 1 cut(s) 1467
BtsCI GGATG 2 cut(s) 1889, 1948
BtsIMutI CAGTG 3 cut(s) 900, 1500, 1528
Cac8I GCNNGC 2 cut(s) 1116, 2353
CaiI CAGNNNCTG 2 cut(s) 887, 1991
CfoI GCGC 3 cut(s) 1632, 1790, 1843
Cfr10I RCCGGY 1 cut(s) 2351
Cfr13I GGNCC 7 cut(s) 538, 884, 1099, 1600, 1834, 2059, 2369
ClaI ATCGAT 1 cut(s) 33
Csp6I GTAC 4 cut(s) 529, 1179, 1457, 2394
CviQI GTAC 4 cut(s) 529, 1179, 1457, 2394
DdeI CTNAG 6 cut(s) 104, 919, 1760, 2319, 2471, 2556
DinI GGCGCC 1 cut(s) 1789
DpnI GATC 8 cut(s) 36, 354, 624, 702, 825, 1233, 1308, 1398
DpnII GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
DraI TTTAAA 1 cut(s) 96
DriI GACNNNNNGTC 1 cut(s) 1339
EaeI YGGCCR 5 cut(s) 930, 1286, 1532, 1741, 1896
Eam1104I CTCTTC 3 cut(s) 1912, 2091, 2376
Eam1105I GACNNNNNGTC 1 cut(s) 1339
EarI CTCTTC 3 cut(s) 1912, 2091, 2376
EciI GGCGGA 1 cut(s) 1267
Ecl136II GAGCTC 1 cut(s) 12
Eco130I CCWWGG 5 cut(s) 577, 598, 1699, 1783, 1893
Eco24I GRGCYC 1 cut(s) 14
Eco32I GATATC 1 cut(s) 185
Eco47I GGWCC 6 cut(s) 884, 1099, 1600, 1834, 2059, 2369
Eco53kI GAGCTC 1 cut(s) 12
Eco57I CTGAAG 2 cut(s) 987, 2309
Eco88I CYCGRG 2 cut(s) 244, 1855
EcoICRI GAGCTC 1 cut(s) 12
EcoO109I RGGNCCY 2 cut(s) 884, 1600
EcoRV GATATC 1 cut(s) 185
EcoT14I CCWWGG 5 cut(s) 577, 598, 1699, 1783, 1893
EcoT22I ATGCAT 1 cut(s) 1222
EcoT38I GRGCYC 1 cut(s) 14
EgeI GGCGCC 1 cut(s) 1789
EheI GGCGCC 1 cut(s) 1789
ErhI CCWWGG 5 cut(s) 577, 598, 1699, 1783, 1893
FalI AAGNNNNNCTT 2 cut(s) 2149, 2181
FaqI GGGAC 2 cut(s) 1613, 1648
FauI CCCGC 1 cut(s) 2453
FbaI TGATCA 1 cut(s) 823
FblI GTMKAC 1 cut(s) 1388
Fnu4HI GCNGC 1 cut(s) 427
FokI GGATG 2 cut(s) 1876, 1955
FriOI GRGCYC 1 cut(s) 14
Fsp4HI GCNGC 1 cut(s) 427
FspBI CTAG 8 cut(s) 153, 161, 404, 423, 1926, 2052, 2241, 2343
FspI TGCGCA 2 cut(s) 1631, 1842
GlaI GCGC 3 cut(s) 1631, 1789, 1842
GluI GCNGC 1 cut(s) 427
GsuI CTGGAG 3 cut(s) 1524, 1668, 2103
HaeII RGCGCY 1 cut(s) 1791
HaeIII GGCC 6 cut(s) 540, 932, 1288, 1534, 1743, 1898
HapII CCGG 4 cut(s) 493, 1254, 2093, 2352
HhaI GCGC 3 cut(s) 1632, 1790, 1843
Hin1I GRCGYC 1 cut(s) 1788
Hin6I GCGC 3 cut(s) 1630, 1788, 1841
HinP1I GCGC 3 cut(s) 1630, 1788, 1841
HincII GTYRAC 3 cut(s) 690, 1572, 2079
HindII GTYRAC 3 cut(s) 690, 1572, 2079
HindIII AAGCTT 3 cut(s) 1723, 1747, 1802
HpaI GTTAAC 1 cut(s) 2079
HpaII CCGG 4 cut(s) 493, 1254, 2093, 2352
HphI GGTGA 4 cut(s) 59, 593, 2189, 2432
Hpy166II GTNNAC 5 cut(s) 690, 1389, 1572, 2023, 2079
Hpy188I TCNGA 9 cut(s) 823, 967, 1108, 1761, 2140, 2295, 2310, 2328, 2472
Hpy8I GTNNAC 5 cut(s) 690, 1389, 1572, 2023, 2079
HpyCH4III ACNGT 4 cut(s) 533, 1546, 1676, 2393
HpyCH4IV ACGT 3 cut(s) 850, 2126, 2605
HpyF10VI GCNNNNNNNGC 2 cut(s) 1120, 2115
HpyF3I CTNAG 6 cut(s) 104, 919, 1760, 2319, 2471, 2556
HpySE526I ACGT 3 cut(s) 850, 2126, 2605
Hsp92I GRCGYC 1 cut(s) 1788
HspAI GCGC 3 cut(s) 1630, 1788, 1841
KasI GGCGCC 1 cut(s) 1787
KpnI GGTACC 1 cut(s) 1182
KroI GCCGGC 1 cut(s) 2351
KroNI GCCGGC 1 cut(s) 2353
Ksp22I TGATCA 1 cut(s) 823
KspAI GTTAAC 1 cut(s) 2079
Kzo9I GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
LguI GCTCTTC 1 cut(s) 2091
LmnI GCTCC 3 cut(s) 17, 1449, 2541
Lsp1109I GCAGC 1 cut(s) 413
LweI GCATC 6 cut(s) 109, 374, 1102, 1207, 1933, 2253
MaeI CTAG 8 cut(s) 153, 161, 404, 423, 1926, 2052, 2241, 2343
MaeII ACGT 3 cut(s) 850, 2126, 2605
MaeIII GTNAC 5 cut(s) 375, 1524, 1686, 2002, 2387
MalI GATC 8 cut(s) 36, 354, 624, 702, 825, 1233, 1308, 1398
MboI GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
MfeI CAATTG 1 cut(s) 1682
MflI RGATCY 2 cut(s) 352, 1231
MhlI GDGCHC 2 cut(s) 14, 2318
MlsI TGGCCA 5 cut(s) 932, 1288, 1534, 1743, 1898
MluNI TGGCCA 5 cut(s) 932, 1288, 1534, 1743, 1898
Mly113I GGCGCC 1 cut(s) 1788
MlyI GAGTC 5 cut(s) 256, 1021, 1138, 1771, 2204
MmeI TCCRAC 2 cut(s) 774, 2091
Mox20I TGGCCA 5 cut(s) 932, 1288, 1534, 1743, 1898
Mph1103I ATGCAT 1 cut(s) 1222
MroNI GCCGGC 1 cut(s) 2351
MroXI GAANNNNTTC 2 cut(s) 500, 2164
MscI TGGCCA 5 cut(s) 932, 1288, 1534, 1743, 1898
Msp20I TGGCCA 5 cut(s) 932, 1288, 1534, 1743, 1898
MspCI CTTAAG 2 cut(s) 473, 1336
MspI CCGG 4 cut(s) 493, 1254, 2093, 2352
MspR9I CCNGG 1 cut(s) 2093
MunI CAATTG 1 cut(s) 1682
Mva1269I GAATGC 1 cut(s) 2492
MvnI CGCG 1 cut(s) 1240
MwoI GCNNNNNNNGC 2 cut(s) 1120, 2115
NaeI GCCGGC 1 cut(s) 2353
NarI GGCGCC 1 cut(s) 1788
NciI CCSGG 1 cut(s) 2093
NcoI CCATGG 3 cut(s) 577, 1783, 1893
NdeII GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
NgoMIV GCCGGC 1 cut(s) 2351
NlaIV GGNNCC 6 cut(s) 217, 497, 1101, 1180, 1601, 1789
NmuCI GTSAC 2 cut(s) 2002, 2387
NsbI TGCGCA 2 cut(s) 1631, 1842
NsiI ATGCAT 1 cut(s) 1222
NspI RCATGY 2 cut(s) 1159, 2077
NspV TTCGAA 1 cut(s) 1211
PaeR7I CTCGAG 1 cut(s) 244
PciI ACATGT 2 cut(s) 1155, 2073
PciSI GCTCTTC 1 cut(s) 2091
PctI GAATGC 1 cut(s) 2492
PdiI GCCGGC 1 cut(s) 2353
PdmI GAANNNNTTC 2 cut(s) 500, 2164
PfeI GAWTC 7 cut(s) 148, 238, 295, 1261, 1323, 1976, 2305
PflMI CCANNNNNTGG 2 cut(s) 1750, 1831
PfoI TCCNGGA 1 cut(s) 2091
PkrI GCNGC 1 cut(s) 428
PleI GAGTC 5 cut(s) 255, 1021, 1137, 1770, 2203
PluTI GGCGCC 1 cut(s) 1791
PpsI GAGTC 5 cut(s) 255, 1021, 1137, 1770, 2203
PpuMI RGGWCCY 2 cut(s) 884, 1600
PscI ACATGT 2 cut(s) 1155, 2073
PsiI TTATAA 1 cut(s) 1800
Psp124BI GAGCTC 1 cut(s) 14
Psp1406I AACGTT 1 cut(s) 2126
Psp5II RGGWCCY 2 cut(s) 884, 1600
PspN4I GGNNCC 6 cut(s) 217, 497, 1101, 1180, 1601, 1789
PspPI GGNCC 7 cut(s) 538, 884, 1099, 1600, 1834, 2059, 2369
PspPPI RGGWCCY 2 cut(s) 884, 1600
PsrI GAACNNNNNNTAC 2 cut(s) 191, 223
PstI CTGCAG 1 cut(s) 1996
PstNI CAGNNNCTG 2 cut(s) 887, 1991
PsuI RGATCY 2 cut(s) 352, 1231
RsaI GTAC 4 cut(s) 530, 1180, 1458, 2395
RsaNI GTAC 4 cut(s) 529, 1179, 1457, 2394
SacI GAGCTC 1 cut(s) 14
SapI GCTCTTC 1 cut(s) 2091
SatI GCNGC 1 cut(s) 427
Sau3AI GATC 8 cut(s) 34, 352, 622, 700, 823, 1231, 1306, 1396
Sau96I GGNCC 7 cut(s) 538, 884, 1099, 1600, 1834, 2059, 2369
SchI GAGTC 5 cut(s) 256, 1021, 1138, 1771, 2204
ScrFI CCNGG 1 cut(s) 2093
SduI GDGCHC 2 cut(s) 14, 2318
SfaNI GCATC 6 cut(s) 109, 374, 1102, 1207, 1933, 2253
SfcI CTRYAG 4 cut(s) 143, 348, 1992, 2415
SfoI GGCGCC 1 cut(s) 1789
Sfr274I CTCGAG 1 cut(s) 244
SfuI TTCGAA 1 cut(s) 1211
SinI GGWCC 6 cut(s) 884, 1099, 1600, 1834, 2059, 2369
SlaI CTCGAG 1 cut(s) 244
SmlI CTYRAG 6 cut(s) 118, 244, 473, 545, 1124, 1336
SmoI CTYRAG 6 cut(s) 118, 244, 473, 545, 1124, 1336
SpeI ACTAGT 1 cut(s) 1925
SsiI CCGC 3 cut(s) 1278, 2367, 2460
SspDI GGCGCC 1 cut(s) 1787
SspMI CTAG 8 cut(s) 153, 161, 404, 423, 1926, 2052, 2241, 2343
SstI GAGCTC 1 cut(s) 14
StyD4I CCNGG 1 cut(s) 2091
StyI CCWWGG 5 cut(s) 577, 598, 1699, 1783, 1893
TaaI ACNGT 4 cut(s) 533, 1546, 1676, 2393
TaiI ACGT 3 cut(s) 853, 2129, 2608
TatI WGTACW 2 cut(s) 528, 2393
TfiI GAWTC 7 cut(s) 148, 238, 295, 1261, 1323, 1976, 2305
TscAI CASTG 3 cut(s) 900, 1507, 1535
TseFI GTSAC 2 cut(s) 2002, 2387
TseI GCWGC 1 cut(s) 426
Tsp45I GTSAC 2 cut(s) 2002, 2387
TspDTI ATGAA 8 cut(s) 473, 936, 962, 1350, 1398, 1469, 2228, 2508
TspRI CASTG 3 cut(s) 900, 1507, 1535
Van91I CCANNNNNTGG 2 cut(s) 1750, 1831
Vha464I CTTAAG 2 cut(s) 473, 1336
VpaK11BI GGWCC 6 cut(s) 884, 1099, 1600, 1834, 2059, 2369
XapI RAATTY 9 cut(s) 585, 844, 1170, 1509, 1552, 1581, 1882, 2131, 2275
XceI RCATGY 2 cut(s) 1159, 2077
XhoI CTCGAG 1 cut(s) 244
XmiI GTMKAC 1 cut(s) 1388
XmnI GAANNNNTTC 2 cut(s) 500, 2164
XspI CTAG 8 cut(s) 153, 161, 404, 423, 1926, 2052, 2241, 2343
Zsp2I ATGCAT 1 cut(s) 1222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.