pycom01g18960

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
17737606 .. 17740494
2889 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g18960.1

Sequence Viewer

Length: 2889 bp
ATGTTCAAGCAAGATCTCGAGGACCCTGCCAATCTGCTTGCATCGTGGGTTGCAGAAGAAGATTCAGACTGTTGCAGTTGGTCAGGAGTTGTCATCGATCACATGACCGGCCACATCCACGAGCTGCACCTTAATAATACCGACCCTTATTTGGAATCTTCCTTGGGTGGTAAGATAAATCCTTCTTTGCTCAGTTTAAAGCATCTCAACTACTTGGACTTGAGTCAAAATAATTTCAGTACAACACGAATTCCTAGTTTCTTTGGTTCTATGACAAGTTTAACACACCTTAATCTTGGAAACTCAATTTTTGATGGAGTAATTCCTCATAAACTAGGAAATCTCTCCAGTCTACGCTATCTCAATCTCAGTAGTTATGGTCTGAAGGTTGATAACCTTCGGTGGATTTCTGGTCTTTCTCTGCTAAAACACTTGGACTTGAGCCATGTAGATCTTAGCAAAGCATCTGACTGGTTGCAAGTTACAAACATGCTTCCTTCTTTGGCAGAGTTAATTATGTTTGGTTGTCAACTTGATCAAATTCCCCATCTACCCACCGCAAATTTTACTTCCCTGGTCGTCCTTGATCTCTCTGAAAACTATTTTAATTCTTTGATGCCGAGGTGGGTTTTCAGTCTTAAAAATCTAGTTTCTCTTCATCTCAGTTTTTGTGGTTTCCAAGGTCCAATTCCTAGCATTTCACATAATATCACATCTTTGAGGGAAATTGATTTGTCACACAATTCTATTAGTCTTGATTCGATTCCCAATTCTATTCGGAATATGACTGGTCTTAAAGTCCTTAATCTTGTGGTTAACAACTTCAATTCTACCATACCTGAATGGTTGTATAGCTTGAACAATCTTGAGTCCTTGCTTCTTTCTTACAATTTCTTACGCGGTGAAATATCGAGTTCCATTGGAAACATGACATCCCTTGTCAATCTTCACTTGGATGGTAATGGGTTGGAAGGGAAAATACCAAATTCTTTGGGGCATCTTTGTAAGTTGAAAGTTCTTGATCTGTCAGAGAACCATTTCACGGTTCGAAGACCATCCGAAATCTTTGAAAGTTTGTCTAGATGTGGTCCAGATGGAATAAAGTCGTTGTCGTTGGGGAATACTAATATATCAGGTCCCATTCCAATGTCACTAGGAAATCTGTCAAGCTTGGAAAAATTGGACATATCTGGAAATCAGTTTAATGGAACTTTCACAGAAGTTATTGGTCAACTCAAAATGCTAACGCAATTGGATATATCTTATAATTTGTTAGAAGGTGCAGTGTCGGAAGTTTCTTTTAGCAACCTTACAAAGTTGAAGCATTTCATTGCAAAAGGAAACTCATTTACTCTGAAAACTAGTCGAGACTGGGTTCCTCCTTTTCAACTTGAAATTTTGCTGCTGGATTCCTGGCATTTGGGGCCTGAATGGCCGATGTGGTTGCGGACACAAACGCAATTACAAGTACTAAGCTTGTCTGGTACACAAATTTCAAGTACTATTCCAACTTGGTTTTGGAACTTAACTTCCCAAGTAGAGTATTTGAATCTCTCTCACAATCAGTTGTATGGGCAGATTCAAAATATAGTTGCTCTTTCAAAGGTTGATCTTAGTTCTAACCATTTCACTGGTGCATTGCCTATTGTTCCCACCTCATTATTTTGGCTAGATCTTTCCGATTCATCATTTTCTGGATCTGTTTTCCACTTCTTCTGTGATAGGCCGGATGAAACAAAGGGACTTTTTGTTCTTCATCTCGGGAACAATTTTCTCACTGGAAAAGTACCCGATTGTTGGATGAGTTGGCAATACTTGAGATTCCTAAATTTAGAAAACAACAACCTAACTGGGAATGTCCCAATGTCCATAGGATACTTAGAAGGGCTGGATTCACTGTACTTGCGCAATAATCACCTGTACGGAGAATTGCCACATTCCCTGCAGAACTGTACTTGGTTGTCAGTTGTTGACCTTAGTGAAAATGGGTTTTCCGGAAGCATACCAATATGGATAGGGAAAAGCCTTTCATGGTTGCATGTTCTTAACCTTCGTTCAAATAAGTTTGAAGAAGATATTCCTAATGAAGTTTGTTATTTGAAAAGTCTCCAGATATTGGACCTTGCACATAACAAACTCTCAGGAATGATACCGAGATGCTTCCACAATTTGAGCGCCATGGCTGATTTTTCAGAATCATTTTTGTCACTGTTTAGCATTGGTTTTCATGCTGTTCCAGAATCATTTGTAATTCAAGACAATGAAATCTTGGTAACGAAAGGGATAGAAATGGAATATACCAAGATTCTGGGATTCGTAAAAGGCATAGACCTTTCATGCAACTTTATGTATGGAGAGATCCCTGAAGAACTTACCGGCCTCCTCGCATTGCAGTCACTCAATTTATCGAATAATCGTTTCACCGGAAGAATTCCTTCAAAGATTGGTAATATGGCACGGTTAGAATCTCTTGATTTTTCCATGAACCAACTTGATGGTGAAATTCCTCCAAGCATGACGAATTTGACATTTCTGAGTCACTTAAACTTGGCCTACAACAATTTGACGGGACGAATTTCGGAAAGCACTCAACTGCAGAGCCTCGATCAGTTGAGCTTCGTCGGCAACGAACTATGCGGAGCTCCACTCAACAAGAATTGCAGCACGAATGGGGTGATACCGCCAGCAAGAGTTGAGCAAGATGGAGGAGGTGGATACCGTTTACTAGAAGATGGGTGGTTCTACGTGAGCTTAGGAGTTGGATTCTTCACGGGGTTTTGGATTGTACTTGGTTCTTTGCTGGTAAACATGCCATGGAGCGTTCTTCTTTCACAGTTGCTGAATAGGATAGTGCTTAAAATGTATCATGTAATTGTTGAATATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

963

Amino Acids

107.45

Weight (kDa)

5.4

Isoelectric Point (pI)

31.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 2 - 30 6.9e-07 Leucine rich repeat N-terminal domain
LRR_14 PF23598 63 - 222 2.2e-09 Leucine-rich repeat region
LRR_8 PF13855 68 - 125 1.5e-06 Leucine rich repeat
LRR_8 PF13855 93 - 149 7.7e-06 Leucine rich repeat
LRR_14 PF23598 136 - 291 1.5e-06 Leucine-rich repeat region
LRR_14 PF23598 236 - 370 9.4e-09 Leucine-rich repeat region
LRR_14 PF23598 381 - 493 1.4e-07 Leucine-rich repeat region
LRR_8 PF13855 390 - 449 5.2e-07 Leucine rich repeat
LRR_8 PF13855 679 - 726 3.2e-06 Leucine rich repeat
LRR_14 PF23598 780 - 872 5.4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1266
Acc16I TGCGCA 1 cut(s) 1907
AccB7I CCANNNNNTGG 1 cut(s) 2116
AccI GTMKAC 1 cut(s) 352
AccII CGCG 1 cut(s) 900
AccIII TCCGGA 1 cut(s) 1994
AciI CCGC 5 cut(s) 558, 900, 1447, 2637, 2681
AclWI GGATC 2 cut(s) 1705, 2353
AcoI YGGCCR 2 cut(s) 109, 1433
AcuI CTGAAG 2 cut(s) 404, 2385
AfaI GTAC 9 cut(s) 241, 1470, 1486, 1501, 1788, 1901, 1922, 1954, 2787
AfiI CCNNNNNNNGG 4 cut(s) 151, 1042, 1797, 2116
AhlI ACTAGT 1 cut(s) 1361
AjnI CCWGG 2 cut(s) 573, 1412
AjuI GAANNNNNNNTTGG 2 cut(s) 672, 704
AloI GAACNNNNNNTCC 4 cut(s) 1514, 1546, 1734, 1766
AluBI AGCT 7 cut(s) 124, 855, 1170, 1476, 2616, 2642, 2751
AluI AGCT 7 cut(s) 124, 855, 1170, 1476, 2616, 2642, 2751
Alw21I GWGCWC 1 cut(s) 2644
Alw26I GTCTC 2 cut(s) 1362, 2111
AlwI GGATC 2 cut(s) 1705, 2353
AlwNI CAGNNNCTG 1 cut(s) 2839
Ama87I CYCGRG 2 cut(s) 17, 1760
Aor13HI TCCGGA 1 cut(s) 1994
AoxI GGCC 6 cut(s) 109, 1424, 1433, 1724, 2377, 2550
ApeKI GCWGC 3 cut(s) 124, 1402, 2661
Asp700I GAANNNNTTC 4 cut(s) 1037, 1325, 2076, 2434
AspLEI GCGC 2 cut(s) 1908, 2177
AspS9I GGNCC 6 cut(s) 22, 683, 1088, 1136, 1424, 2119
AsuHPI GGTGA 5 cut(s) 914, 1907, 2413, 2510, 2686
AsuII TTCGAA 1 cut(s) 1048
AvaI CYCGRG 2 cut(s) 17, 1760
AvaII GGWCC 5 cut(s) 22, 683, 1088, 1136, 2119
BanII GRGCYC 1 cut(s) 2644
BarI GAAGNNNNNNTAC 2 cut(s) 963, 995
BauI CACGAG 1 cut(s) 119
BbsI GAAGAC 1 cut(s) 1057
Bbv12I GWGCWC 1 cut(s) 2644
BbvI GCAGC 3 cut(s) 111, 1389, 2673
BccI CCATC 8 cut(s) 308, 555, 950, 1063, 1088, 2489, 2696, 2726
BcgI CGANNNNNNTGC 4 cut(s) 8, 42, 1426, 1460
BciT130I CCWGG 2 cut(s) 575, 1414
BciVI GTATCC 2 cut(s) 1868, 2708
BclI TGATCA 1 cut(s) 535
BcoDI GTCTC 2 cut(s) 1362, 2111
BcuI ACTAGT 1 cut(s) 1361
BfaI CTAG 9 cut(s) 255, 335, 647, 693, 1080, 1154, 1362, 1670, 2726
BfmI CTRYAG 2 cut(s) 1943, 2594
BfoI RGCGCY 1 cut(s) 2178
BfuI GTATCC 2 cut(s) 1868, 2708
BglI GCCNNNNNGGC 1 cut(s) 1432
BglII AGATCT 3 cut(s) 13, 451, 1672
BisI GCNGC 3 cut(s) 125, 1403, 2662
BlsI GCNGC 3 cut(s) 126, 1404, 2663
BmcAI AGTACT 2 cut(s) 1470, 1501
Bme1390I CCNGG 2 cut(s) 575, 1414
Bme18I GGWCC 5 cut(s) 22, 683, 1088, 1136, 2119
BmeT110I CYCGRG 2 cut(s) 17, 1760
BmgT120I GGNCC 6 cut(s) 22, 683, 1088, 1136, 1424, 2119
BmiI GGNNCC 4 cut(s) 24, 1138, 1377, 1425
BmrFI CCNGG 2 cut(s) 575, 1414
BmrI ACTGGG 2 cut(s) 1381, 1860
BmsI GCATC 6 cut(s) 50, 211, 473, 606, 1006, 2147
BmuI ACTGGG 2 cut(s) 1381, 1860
BoxI GACNNNNGTC 1 cut(s) 222
BpiI GAAGAC 1 cut(s) 1057
BplI GAGNNNNNCTC 2 cut(s) 2631, 2663
BpmI CTGGAG 2 cut(s) 331, 2093
Bpu10I CCTNAGC 1 cut(s) 2752
Bpu14I TTCGAA 1 cut(s) 1048
BpuEI CTTGAG 4 cut(s) 241, 460, 887, 1837
Bsa29I ATCGAT 1 cut(s) 96
BsaAI YACGTR 1 cut(s) 2746
BsaJI CCNNGG 6 cut(s) 162, 573, 620, 679, 2178, 2813
BsaWI WCCGGW 2 cut(s) 1994, 2423
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 1042, 1797, 2116
Bse118I RCCGGY 2 cut(s) 107, 2375
Bse1I ACTGG 7 cut(s) 348, 476, 793, 1376, 1636, 1783, 1855
Bse3DI GCAATG 3 cut(s) 1329, 1637, 2387
BseAI TCCGGA 1 cut(s) 1994
BseBI CCWGG 2 cut(s) 575, 1414
BseCI ATCGAT 1 cut(s) 96
BseDI CCNNGG 6 cut(s) 162, 573, 620, 679, 2178, 2813
BseGI GGATG 6 cut(s) 114, 932, 961, 1055, 1735, 1806
BseLI CCNNNNNNNGG 4 cut(s) 151, 1042, 1797, 2116
BseMI GCAATG 3 cut(s) 1329, 1637, 2387
BseMII CTCAG 5 cut(s) 205, 382, 676, 2154, 2525
BseNI ACTGG 7 cut(s) 348, 476, 793, 1376, 1636, 1783, 1855
BseRI GAGGAG 2 cut(s) 2372, 2721
BseXI GCAGC 3 cut(s) 111, 1389, 2673
BsgI GTGCAG 2 cut(s) 110, 1302
Bsh1236I CGCG 1 cut(s) 900
BshFI GGCC 6 cut(s) 111, 1426, 1435, 1726, 2379, 2552
BshVI ATCGAT 1 cut(s) 96
BsiHKAI GWGCWC 1 cut(s) 2644
BsiHKCI CYCGRG 2 cut(s) 17, 1760
BsiSI CCGG 5 cut(s) 108, 1727, 1995, 2376, 2424
BslFI GGGAC 4 cut(s) 1122, 1755, 1844, 2583
BslI CCNNNNNNNGG 4 cut(s) 151, 1042, 1797, 2116
BsmAI GTCTC 2 cut(s) 1362, 2111
BsmFI GGGAC 4 cut(s) 1122, 1755, 1844, 2583
BsnI GGCC 6 cut(s) 111, 1426, 1435, 1726, 2379, 2552
BsoBI CYCGRG 2 cut(s) 17, 1760
Bsp119I TTCGAA 1 cut(s) 1048
Bsp1286I GDGCHC 1 cut(s) 2644
Bsp13I TCCGGA 1 cut(s) 1994
Bsp19I CCATGG 2 cut(s) 2178, 2813
BspACI CCGC 5 cut(s) 558, 900, 1447, 2637, 2681
BspANI GGCC 6 cut(s) 111, 1426, 1435, 1726, 2379, 2552
BspCNI CTCAG 5 cut(s) 204, 381, 675, 2153, 2526
BspDI ATCGAT 1 cut(s) 96
BspEI TCCGGA 1 cut(s) 1994
BspFNI CGCG 1 cut(s) 900
BspLI GGNNCC 4 cut(s) 24, 1138, 1377, 1425
BspMAI CTGCAG 2 cut(s) 1947, 2598
BspPI GGATC 2 cut(s) 1705, 2353
BspT104I TTCGAA 1 cut(s) 1048
BsrDI GCAATG 3 cut(s) 1329, 1637, 2387
BsrFI RCCGGY 2 cut(s) 107, 2375
BsrI ACTGG 7 cut(s) 348, 476, 793, 1376, 1636, 1783, 1855
BssAI RCCGGY 2 cut(s) 107, 2375
BssECI CCNNGG 6 cut(s) 162, 573, 620, 679, 2178, 2813
BssSI CACGAG 1 cut(s) 119
BssT1I CCWWGG 4 cut(s) 162, 679, 2178, 2813
Bst2BI CACGAG 1 cut(s) 119
Bst2UI CCWGG 2 cut(s) 575, 1414
Bst4CI ACNGT 8 cut(s) 71, 1045, 1899, 1952, 2211, 2460, 2720, 2835
Bst6I CTCTTC 1 cut(s) 660
BstBAI YACGTR 1 cut(s) 2746
BstBI TTCGAA 1 cut(s) 1048
BstC8I GCNNGC 2 cut(s) 39, 2685
BstDSI CCRYGG 2 cut(s) 2178, 2813
BstF5I GGATG 6 cut(s) 114, 932, 961, 1055, 1735, 1806
BstFNI CGCG 1 cut(s) 900
BstH2I RGCGCY 1 cut(s) 2178
BstHHI GCGC 2 cut(s) 1908, 2177
BstMAI GTCTC 2 cut(s) 1362, 2111
BstMWI GCNNNNNNNGC 3 cut(s) 1423, 1432, 2622
BstNI CCWGG 2 cut(s) 575, 1414
BstNSI RCATGY 3 cut(s) 493, 2042, 2812
BstPAI GACNNNNGTC 1 cut(s) 222
BstSCI CCNGG 2 cut(s) 573, 1412
BstSFI CTRYAG 2 cut(s) 1943, 2594
BstUI CGCG 1 cut(s) 900
BstV1I GCAGC 3 cut(s) 111, 1389, 2673
BstV2I GAAGAC 1 cut(s) 1057
BstX2I RGATCY 5 cut(s) 13, 451, 1672, 1697, 2358
BstXI CCANNNNNNTGG 3 cut(s) 1631, 2308, 2495
BstYI RGATCY 5 cut(s) 13, 451, 1672, 1697, 2358
Bsu15I ATCGAT 1 cut(s) 96
BsuI GTATCC 2 cut(s) 1868, 2708
BsuRI GGCC 6 cut(s) 111, 1426, 1435, 1726, 2379, 2552
BsuTUI ATCGAT 1 cut(s) 96
BtgI CCRYGG 2 cut(s) 2178, 2813
BtsCI GGATG 6 cut(s) 114, 932, 961, 1055, 1735, 1806
BtsI GCAGTG 1 cut(s) 1290
BtsIMutI CAGTG 5 cut(s) 1290, 1629, 1776, 1895, 2207
Cac8I GCNNGC 2 cut(s) 39, 2685
CaiI CAGNNNCTG 1 cut(s) 2839
CfoI GCGC 2 cut(s) 1908, 2177
Cfr10I RCCGGY 2 cut(s) 107, 2375
Cfr13I GGNCC 6 cut(s) 22, 683, 1088, 1136, 1424, 2119
ClaI ATCGAT 1 cut(s) 96
Csp6I GTAC 9 cut(s) 240, 1469, 1485, 1500, 1787, 1900, 1921, 1953, 2786
CviQI GTAC 9 cut(s) 240, 1469, 1485, 1500, 1787, 1900, 1921, 1953, 2786
DraI TTTAAA 1 cut(s) 198
EaeI YGGCCR 2 cut(s) 109, 1433
Eam1104I CTCTTC 1 cut(s) 660
EarI CTCTTC 1 cut(s) 660
Ecl136II GAGCTC 1 cut(s) 2642
Eco130I CCWWGG 4 cut(s) 162, 679, 2178, 2813
Eco24I GRGCYC 1 cut(s) 2644
Eco47I GGWCC 5 cut(s) 22, 683, 1088, 1136, 2119
Eco53kI GAGCTC 1 cut(s) 2642
Eco57I CTGAAG 2 cut(s) 404, 2385
Eco88I CYCGRG 2 cut(s) 17, 1760
EcoICRI GAGCTC 1 cut(s) 2642
EcoO109I RGGNCCY 3 cut(s) 22, 1136, 1424
EcoRI GAATTC 2 cut(s) 249, 2430
EcoRII CCWGG 2 cut(s) 573, 1412
EcoT14I CCWWGG 4 cut(s) 162, 679, 2178, 2813
EcoT38I GRGCYC 1 cut(s) 2644
ErhI CCWWGG 4 cut(s) 162, 679, 2178, 2813
FalI AAGNNNNNCTT 2 cut(s) 2419, 2451
FaqI GGGAC 4 cut(s) 1122, 1755, 1844, 2583
FbaI TGATCA 1 cut(s) 535
FblI GTMKAC 1 cut(s) 352
Fnu4HI GCNGC 3 cut(s) 125, 1403, 2662
FokI GGATG 6 cut(s) 101, 919, 968, 1042, 1742, 1813
FriOI GRGCYC 1 cut(s) 2644
Fsp4HI GCNGC 3 cut(s) 125, 1403, 2662
FspBI CTAG 9 cut(s) 255, 335, 647, 693, 1080, 1154, 1362, 1670, 2726
FspI TGCGCA 1 cut(s) 1907
GlaI GCGC 2 cut(s) 1907, 2176
GluI GCNGC 3 cut(s) 125, 1403, 2662
GsuI CTGGAG 2 cut(s) 331, 2093
HaeII RGCGCY 1 cut(s) 2178
HaeIII GGCC 6 cut(s) 111, 1426, 1435, 1726, 2379, 2552
HapII CCGG 5 cut(s) 108, 1727, 1995, 2376, 2424
HhaI GCGC 2 cut(s) 1908, 2177
Hin6I GCGC 2 cut(s) 1906, 2175
HinP1I GCGC 2 cut(s) 1906, 2175
HincII GTYRAC 4 cut(s) 530, 817, 1232, 1972
HindII GTYRAC 4 cut(s) 530, 817, 1232, 1972
HindIII AAGCTT 2 cut(s) 1168, 1474
HpaI GTTAAC 1 cut(s) 817
HpaII CCGG 5 cut(s) 108, 1727, 1995, 2376, 2424
HphI GGTGA 5 cut(s) 914, 1907, 2413, 2510, 2686
Hpy166II GTNNAC 8 cut(s) 353, 530, 817, 1232, 1487, 1972, 2723, 2806
Hpy8I GTNNAC 8 cut(s) 353, 530, 817, 1232, 1487, 1972, 2723, 2806
Hpy99I CGWCG 1 cut(s) 2624
HpyAV CCTTC 9 cut(s) 192, 379, 407, 507, 965, 1271, 1877, 2060, 2445
HpyCH4III ACNGT 8 cut(s) 71, 1045, 1899, 1952, 2211, 2460, 2720, 2835
HpyCH4IV ACGT 1 cut(s) 2745
HpyF10VI GCNNNNNNNGC 3 cut(s) 1423, 1432, 2622
HpySE526I ACGT 1 cut(s) 2745
HspAI GCGC 2 cut(s) 1906, 2175
Kpn2I TCCGGA 1 cut(s) 1994
Ksp22I TGATCA 1 cut(s) 535
KspAI GTTAAC 1 cut(s) 817
LmnI GCTCC 3 cut(s) 2639, 2647, 2817
Lsp1109I GCAGC 3 cut(s) 111, 1389, 2673
LweI GCATC 6 cut(s) 50, 211, 473, 606, 1006, 2147
MaeI CTAG 9 cut(s) 255, 335, 647, 693, 1080, 1154, 1362, 1670, 2726
MaeII ACGT 1 cut(s) 2745
MaeIII GTNAC 7 cut(s) 481, 735, 1149, 2205, 2272, 2394, 2537
MfeI CAATTG 1 cut(s) 1250
MflI RGATCY 5 cut(s) 13, 451, 1672, 1697, 2358
MhlI GDGCHC 1 cut(s) 2644
MlyI GAGTC 3 cut(s) 232, 878, 2545
MmeI TCCRAC 5 cut(s) 948, 1269, 1532, 1778, 2740
MroI TCCGGA 1 cut(s) 1994
MroXI GAANNNNTTC 4 cut(s) 1037, 1325, 2076, 2434
MslI CAYNNNNRTG 2 cut(s) 954, 1145
MspI CCGG 5 cut(s) 108, 1727, 1995, 2376, 2424
MspR9I CCNGG 2 cut(s) 575, 1414
MunI CAATTG 1 cut(s) 1250
MvaI CCWGG 2 cut(s) 575, 1414
MvnI CGCG 1 cut(s) 900
MwoI GCNNNNNNNGC 3 cut(s) 1423, 1432, 2622
NcoI CCATGG 2 cut(s) 2178, 2813
NlaIV GGNNCC 4 cut(s) 24, 1138, 1377, 1425
NmeAIII GCCGAG 1 cut(s) 645
NmuCI GTSAC 5 cut(s) 735, 1149, 2205, 2394, 2537
NsbI TGCGCA 1 cut(s) 1907
NspI RCATGY 3 cut(s) 493, 2042, 2812
NspV TTCGAA 1 cut(s) 1048
PaeR7I CTCGAG 1 cut(s) 17
PcsI WCGNNNNNNNCGW 1 cut(s) 2625
PdmI GAANNNNTTC 4 cut(s) 1037, 1325, 2076, 2434
PflMI CCANNNNNTGG 1 cut(s) 2116
PkrI GCNGC 3 cut(s) 126, 1404, 2663
PleI GAGTC 3 cut(s) 231, 877, 2544
PpsI GAGTC 3 cut(s) 231, 877, 2544
Ppu21I YACGTR 1 cut(s) 2746
PpuMI RGGWCCY 2 cut(s) 22, 1136
PshAI GACNNNNGTC 1 cut(s) 222
PsiI TTATAA 1 cut(s) 1266
Psp124BI GAGCTC 1 cut(s) 2644
Psp5II RGGWCCY 2 cut(s) 22, 1136
Psp6I CCWGG 2 cut(s) 573, 1412
PspGI CCWGG 2 cut(s) 573, 1412
PspN4I GGNNCC 4 cut(s) 24, 1138, 1377, 1425
PspPI GGNCC 6 cut(s) 22, 683, 1088, 1136, 1424, 2119
PspPPI RGGWCCY 2 cut(s) 22, 1136
PstI CTGCAG 2 cut(s) 1947, 2598
PstNI CAGNNNCTG 1 cut(s) 2839
PsuI RGATCY 5 cut(s) 13, 451, 1672, 1697, 2358
RsaI GTAC 9 cut(s) 241, 1470, 1486, 1501, 1788, 1901, 1922, 1954, 2787
RsaNI GTAC 9 cut(s) 240, 1469, 1485, 1500, 1787, 1900, 1921, 1953, 2786
RseI CAYNNNNRTG 2 cut(s) 954, 1145
SacI GAGCTC 1 cut(s) 2644
SatI GCNGC 3 cut(s) 125, 1403, 2662
Sau96I GGNCC 6 cut(s) 22, 683, 1088, 1136, 1424, 2119
ScaI AGTACT 2 cut(s) 1470, 1501
SchI GAGTC 3 cut(s) 232, 878, 2545
ScrFI CCNGG 2 cut(s) 575, 1414
SduI GDGCHC 1 cut(s) 2644
SfaNI GCATC 6 cut(s) 50, 211, 473, 606, 1006, 2147
SfcI CTRYAG 2 cut(s) 1943, 2594
SfiI GGCCNNNNNGGCC 1 cut(s) 1432
Sfr274I CTCGAG 1 cut(s) 17
SfuI TTCGAA 1 cut(s) 1048
SinI GGWCC 5 cut(s) 22, 683, 1088, 1136, 2119
SlaI CTCGAG 1 cut(s) 17
SmiMI CAYNNNNRTG 2 cut(s) 954, 1145
SmlI CTYRAG 5 cut(s) 17, 220, 439, 866, 1816
SmoI CTYRAG 5 cut(s) 17, 220, 439, 866, 1816
SpeI ACTAGT 1 cut(s) 1361
SsiI CCGC 5 cut(s) 558, 900, 1447, 2637, 2681
SspMI CTAG 9 cut(s) 255, 335, 647, 693, 1080, 1154, 1362, 1670, 2726
SstI GAGCTC 1 cut(s) 2644
StyD4I CCNGG 2 cut(s) 573, 1412
StyI CCWWGG 4 cut(s) 162, 679, 2178, 2813
TaaI ACNGT 8 cut(s) 71, 1045, 1899, 1952, 2211, 2460, 2720, 2835
TaiI ACGT 1 cut(s) 2748
TaqI TCGA 8 cut(s) 18, 96, 761, 911, 1048, 1366, 2408, 2604
TatI WGTACW 6 cut(s) 239, 1468, 1499, 1899, 1952, 2785
TscAI CASTG 5 cut(s) 1290, 1636, 1783, 1902, 2214
TseFI GTSAC 5 cut(s) 735, 1149, 2205, 2394, 2537
TseI GCWGC 3 cut(s) 124, 1402, 2661
Tsp45I GTSAC 5 cut(s) 735, 1149, 2205, 2394, 2537
TspGWI ACGGA 1 cut(s) 1938
TspRI CASTG 5 cut(s) 1290, 1636, 1783, 1902, 2214
Van91I CCANNNNNTGG 1 cut(s) 2116
VpaK11BI GGWCC 5 cut(s) 22, 683, 1088, 1136, 2119
XbaI TCTAGA 1 cut(s) 1079
XceI RCATGY 3 cut(s) 493, 2042, 2812
XcmI CCANNNNNNNNNTGG 1 cut(s) 1515
XhoI CTCGAG 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 352
XmnI GAANNNNTTC 4 cut(s) 1037, 1325, 2076, 2434
XspI CTAG 9 cut(s) 255, 335, 647, 693, 1080, 1154, 1362, 1670, 2726
ZrmI AGTACT 2 cut(s) 1470, 1501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.