RchiOBHm_Chr1g0373241

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
61581128 .. 61587737
6610 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59714

Sequence Viewer

Length: 3423 bp
ATGAGAACCGTCTTACTTCACACGTTACTAACCATTGCAACCATTACTACTAGTATAGGTTCATGCAATGGAAACCTGGGTGTGCCTTGTATAGAAAGCGAAAAACAGGCGCTTCTCATTTTCAAGCAAGATCTTAAAGATCCTTCAAATCGGCTTTCATCATGGGTTGCTCAAGAAGATTCCAACTGCTGCAATTGGGCTGGAGTTGTCTGTCATTACTCCACCGGCCACATCTATGAGCTACATCTTGACAACCCGGTGGCTTCCATCTCTTCCTTGGGTGGTAAGATAAATCCTTCCCTGCTCAATTTAACGCATCTTACCTACTTGAACCTAAGTAACAATAACTTTCAAGGGACAAAGATTCCTGGCTTCTTTGGTTCTCTTAAGAGTTTAACTCACCTTGACCTCTCAGAAGCAAGCTTCGGAGGAATGGTTCCCCATCAACTGGGAAATCTTTCCAGTCTAAGCCATCTCTTTCTTGGTGGCGACGGCCTGAAAGTTGAGAACCTCCGATGGATTTCTGGTCTTTCTCGGTTGGAACACCTGGACATGAGTGGTGTTAATCTTAGCAAAGCATCTGATCATTGGCTGCTAGTGACAAACATGCTCCCCTCCTTGGTAGAATTACGCATGGTCTATTGTCAACTTCATAGCATTCCACTTCTACCTATCGTCAATTTTACTTCACTTGCCATCCTTGATCTTTCTCGGAACGAATTTAGTTCTTTCATTCCCGGGTGGGTTTTCAGTCTTAGAAATCTAGTTTCTCTTTATCTGGTGGGTTGTGGCTTCCAAGGTCCGATTCCGAACAGTCCACACAATATCACGTCTCTCAGGGAAATTGATCTCTCCAGGAATTTTCTTAATCTTACGATACCCGAGTGGTTGTTTCACTACAAACACCTCACTCTTTTGGACCTGGGTTACAATTACCTTGAAGGGCCACTGCCAGATGGTATGATGAATATGACTGGTCTTAAAGTTCTTAATCTCAAAGTGAACCAATTCAATTCAACCATACCTGAGTGGTTGTATAGTTTTAACCATCTTGAGTCCTTAATTCTTTCTTTCAATAACTTTCGGGGTGAAATTTCAAGTTCCATTGGAAAATTGACATCCATCATCAACCTAGAGTTGAAGCATAATCTGTTGGTAGGAAAAATGCCAAAGTCATTGGGAAATCTTTGTAAATTGATGGTTCTTGATCTTTCATGGAACCGATTCACGGTTGGAAGGTTAACAGAAATCTTTGAAGCTTTGTCTGTGTGTGGTTCAAATAGAATACGGTCATTGTCTATGGGATCTTGTAATCTTTCTGGTCAGTTAACAGAGCAGGTAGGAACCTTTACAAACTTGAGCGTCCTTTATCTTTCTCATAATTCATTATCCGGTCCCATTCCTGTGTCCCTGGGAAATCTGTCATGCTTAGTAACATTAGACATCTCTCAAAATCAGTTCAATGGAACTCTTCCAGAAAGCATTGGTCAACTCAAAATGCTAAAGTCTTTGAATATATCCCATAATTCATTGGAAGGTTTAGTCTCTGAAGTTCATTTTACTTGTCTTACAACATTGTCAAGCTTCCTTGGAAACGGAAATTCATTGATGCTCAATACTAGTCGAGATTGGACTCCTCCTTTTCAACTTCACGACTTAGGATTAGATTCCTGGCATATAGGTCCTGAATTTCCTATGTGGATTCAGCGACAAGTCCAGTTACAGAATCTAAGCTTATCTAGTACAGGACTTTCGGGTCCCATTCCCAATTGGGTTTGGAACTCATCTTTAGTTTTTCTTGATCTCTCTCGCAATCAATTGCATGGAGAGATCCAATGTTTAGTTGCTTCCCAGTTGTCGATAATTGACTTGAGTTCTAACCAGTTCAACGGTTCATTACCTCTTATTTCTTCCAATGTACGTACACTAGATCTTTCCAATTCATCATTTTCTGGATCTGTCACCAGCTTCTTTTGTGATACAAGAAATGGGCCAAAACAACTTGAAGTTCTTCATCTCGCGAACAATCATCTCGTTGGAAGAATTCCTGATTGTTGGATGAATTGGAAAAGCCTGAAAATTGTGAATTTAGAAGACAACAAGTTGACTGGGAATATTCCAAGCTCCATGGGATACTTGCTAGACCTCCGATCACTCCACCTGCGCAATAATCAGCTATCTGGGGAATTACCTCTATCATTGCAGAACTGTACTAAATTGCTGGTTGTTGACCTTGGTCTGAATAAGTTTGGAGGAAGCTTACCAACATGGATGGGAAAAAGCTTTCCAGACTTGATGGTTCTTAACCTTCGTTCAAATAAGCTTCAGGGAGACATTCCGTATGAACTATGTGATCTCGCAAATCTCCGAATCTTGGACATTGCAAATAACAATCTCTCGGGAACAATACCAAGATGCTTCAACCGTTTTCTTGCCATGAGCACCATGACAGAAGCTAATCTTACTTGGTTAAAAGATTTGTTTGGTATTGATCCGTCGGTTCTTGATAAGCTGTACAAAGAATATGCGGTCTTGATTTTTAAGGGGATAGAATTGCGCTTTAGCAAGATTCCTTTTCTTCTGACAAGCATGGACGTTTCAGCCAACATTATATCTGGGGAGATTCCTGAGGAACTGACTAGTCTCAATGCCTTGATAGCACTGAACTTATCAAACAATCTTTTGACCGGAAGAATCCCTTCAAAGATTGGTAATTTGGATCAGTTAGAAGCTCTTGATTTGTCTAAGAACCATCTTTTTGGTGAAATTCCTGCAAGCACGACGAGAATGACATTTCTGGGTCACCTGAACTTGTCCTACAACAATCTGGCTGGACGGATTCCAGAAAGCGGTCAGCTTCTGACCTTTGATGAGTCCAGCTTTGTTGGCAATGAACTTTGCGGTCCTCCACTCATCAAGAATTGCAGTGCAAGCAAGGTGACACCACCAACAGTTGACCAGCAGAGTGGATATGATTTATTTGATGACAAGTGGTTCTATCTGAGCTTGGAATTGGGATTCGTGGTCGGTTTCTGGAGTATACTTGGTTCTTTGCTGGTATTGGCACTGCAGAAGAAAAGAGCAGGAGCTCCATCTTTTACCAAAGGCTTAGCTGCTCAAACGATTCAATTCAAAACTTTTCTCAGTCATCCAGTGATTATTTTTCTTGTTATTTTTCACAGTATGCCTTTTGAAAGATGGTACGAAGATAATGCGGTCATGGTGACAAAAGGGAGAGAAGTGCAATACAGCAAGATTCTTACACTTGTGAAAAGCATGGACATATCAGCCAACATTATATCTGGGGAGATTCCCGAGGAACTGACCAGCCTCATTGCCTTGCAAACATTGAACTTATCAAACAATCTTTTGACCGGAAGAATCCCTTCAAAGATTGGTAAGTCACTAAGCTGGGTCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1140

Amino Acids

126.15

Weight (kDa)

6.36

Isoelectric Point (pI)

34.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 32 - 71 2.1e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 100 - 217 2.6e-08 Leucine-rich repeat region
LRR_8 PF13855 106 - 165 4.5e-07 Leucine rich repeat
LRR_8 PF13855 205 - 263 7.2e-06 Leucine rich repeat
LRR_14 PF23598 429 - 528 9.1e-08 Leucine-rich repeat region
LRR_8 PF13855 667 - 726 2e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2169
AasI GACNNNNNNGTC 1 cut(s) 1755
Acc16I TGCGCA 1 cut(s) 2165
Acc36I ACCTGC 2 cut(s) 1327, 2169
AccB7I CCANNNNNTGG 1 cut(s) 448
AccI GTMKAC 1 cut(s) 3040
AccII CGCG 1 cut(s) 2021
AciI CCGC 4 cut(s) 2528, 2850, 2901, 3215
AclWI GGATC 6 cut(s) 134, 1312, 1825, 1963, 2486, 2727
AcoI YGGCCR 1 cut(s) 226
AcsI RAATTY 8 cut(s) 719, 859, 1092, 1600, 1688, 2043, 2086, 2766
AcuI CTGAAG 2 cut(s) 1569, 2309
AfaI GTAC 6 cut(s) 1744, 1920, 1924, 2212, 2516, 3203
AfiI CCNNNNNNNGG 5 cut(s) 448, 619, 1228, 2374, 2849
AflII CTTAAG 1 cut(s) 386
AflIII ACRYGT 1 cut(s) 21
AhlI ACTAGT 3 cut(s) 50, 1619, 2639
AjiI CACGTC 1 cut(s) 831
AjnI CCWGG 7 cut(s) 75, 367, 546, 854, 921, 1410, 1670
AjuI GAANNNNNNNTTGG 2 cut(s) 789, 821
AloI GAACNNNNNNTCC 2 cut(s) 420, 452
Alw21I GWGCWC 2 cut(s) 2444, 3091
Alw26I GTCTC 4 cut(s) 837, 1549, 2325, 2648
AlwI GGATC 6 cut(s) 134, 1312, 1825, 1963, 2486, 2727
AlwNI CAGNNNCTG 1 cut(s) 2860
Ama87I CYCGRG 4 cut(s) 737, 881, 2398, 3314
AoxI GGCC 4 cut(s) 226, 493, 944, 1991
ApeKI GCWGC 3 cut(s) 189, 592, 3113
ApoI RAATTY 8 cut(s) 719, 859, 1092, 1600, 1688, 2043, 2086, 2766
Asp700I GAANNNNTTC 6 cut(s) 457, 1007, 1223, 2010, 2698, 3385
AspLEI GCGC 3 cut(s) 112, 2166, 2559
AspS9I GGNCC 8 cut(s) 800, 919, 944, 1394, 1682, 1757, 1991, 2903
AsuC2I CCSGG 3 cut(s) 257, 738, 739
AsuHPI GGTGA 7 cut(s) 392, 1100, 1954, 2774, 2795, 2950, 3235
AvaI CYCGRG 4 cut(s) 737, 881, 2398, 3314
AvaII GGWCC 6 cut(s) 800, 919, 1394, 1682, 1757, 2903
AxyI CCTNAGG 1 cut(s) 2628
BaeI ACNNNNGTAYC 2 cut(s) 869, 902
BanII GRGCYC 1 cut(s) 3091
BbsI GAAGAC 1 cut(s) 2100
Bbv12I GWGCWC 2 cut(s) 2444, 3091
BbvI GCAGC 3 cut(s) 176, 579, 3100
BceAI ACGGC 1 cut(s) 508
BcgI CGANNNNNNTGC 2 cut(s) 3194, 3228
BciT130I CCWGG 7 cut(s) 77, 369, 548, 856, 923, 1412, 1672
BciVI GTATCC 1 cut(s) 2126
BclI TGATCA 1 cut(s) 583
BcnI CCSGG 3 cut(s) 257, 738, 739
BcoDI GTCTC 4 cut(s) 837, 1549, 2325, 2648
BcuI ACTAGT 3 cut(s) 50, 1619, 2639
BfaI CTAG 9 cut(s) 51, 596, 764, 1133, 1620, 1740, 1928, 2141, 2640
BfmI CTRYAG 1 cut(s) 3068
BfoI RGCGCY 1 cut(s) 113
BfrI CTTAAG 1 cut(s) 386
BfuAI ACCTGC 2 cut(s) 1327, 2169
BfuI GTATCC 1 cut(s) 2126
BglII AGATCT 2 cut(s) 130, 1930
BisI GCNGC 3 cut(s) 190, 593, 3114
BlpI GCTNAGC 1 cut(s) 3109
BlsI GCNGC 3 cut(s) 191, 594, 3115
Bme18I GGWCC 6 cut(s) 800, 919, 1394, 1682, 1757, 2903
BmeT110I CYCGRG 4 cut(s) 737, 881, 2398, 3314
BmgBI CACGTC 1 cut(s) 831
BmgT120I GGNCC 8 cut(s) 800, 919, 944, 1394, 1682, 1757, 1991, 2903
BmiI GGNNCC 6 cut(s) 438, 1220, 1345, 1396, 1758, 1759
BmrI ACTGGG 3 cut(s) 458, 1846, 2118
BmsI GCATC 4 cut(s) 325, 587, 1599, 2405
BmuI ACTGGG 3 cut(s) 458, 1846, 2118
BoxI GACNNNNGTC 1 cut(s) 2235
BpiI GAAGAC 1 cut(s) 2100
BplI GAGNNNNNCTC 2 cut(s) 382, 414
BpmI CTGGAG 3 cut(s) 222, 838, 3055
Bpu1102I GCTNAGC 1 cut(s) 3109
BpuEI CTTGAG 4 cut(s) 156, 1073, 1378, 1891
BpuMI CCSGG 3 cut(s) 257, 738, 739
BsaAI YACGTR 1 cut(s) 1922
BsaWI WCCGGW 3 cut(s) 1391, 2687, 3374
BsaXI ACNNNNNCTCC 2 cut(s) 420, 450
Bsc4I CCNNNNNNNGG 5 cut(s) 448, 619, 1228, 2374, 2849
Bse118I RCCGGY 1 cut(s) 224
Bse1I ACTGG 8 cut(s) 453, 462, 979, 1717, 1852, 1882, 2113, 3152
Bse21I CCTNAGG 1 cut(s) 2628
Bse3DI GCAATG 6 cut(s) 33, 73, 2198, 2379, 2896, 3333
BseBI CCWGG 7 cut(s) 77, 369, 548, 856, 923, 1412, 1672
BseGI GGATG 5 cut(s) 696, 1118, 2064, 2277, 3148
BseLI CCNNNNNNNGG 5 cut(s) 448, 619, 1228, 2374, 2849
BseMI GCAATG 6 cut(s) 33, 73, 2198, 2379, 2896, 3333
BseMII CTCAG 6 cut(s) 426, 850, 1017, 2619, 2993, 3157
BseNI ACTGG 8 cut(s) 453, 462, 979, 1717, 1852, 1882, 2113, 3152
BseRI GAGGAG 1 cut(s) 1626
BseXI GCAGC 3 cut(s) 176, 579, 3100
BseYI CCCAGC 1 cut(s) 3411
Bsh1236I CGCG 1 cut(s) 2021
BshFI GGCC 4 cut(s) 228, 495, 946, 1993
BsiHKAI GWGCWC 2 cut(s) 2444, 3091
BsiHKCI CYCGRG 4 cut(s) 737, 881, 2398, 3314
BsiSI CCGG 6 cut(s) 225, 257, 738, 1392, 2688, 3375
BslFI GGGAC 4 cut(s) 370, 1380, 1393, 1743
BslI CCNNNNNNNGG 5 cut(s) 448, 619, 1228, 2374, 2849
BsmAI GTCTC 4 cut(s) 837, 1549, 2325, 2648
BsmBI CGTCTC 1 cut(s) 837
BsmFI GGGAC 4 cut(s) 370, 1380, 1393, 1743
BsmI GAATGC 1 cut(s) 657
BsnI GGCC 4 cut(s) 228, 495, 946, 1993
BsoBI CYCGRG 4 cut(s) 737, 881, 2398, 3314
Bsp1286I GDGCHC 2 cut(s) 2444, 3091
Bsp1407I TGTACA 1 cut(s) 2514
Bsp1720I GCTNAGC 1 cut(s) 3109
Bsp19I CCATGG 1 cut(s) 2127
Bsp68I TCGCGA 1 cut(s) 2021
BspACI CCGC 4 cut(s) 2528, 2850, 2901, 3215
BspANI GGCC 4 cut(s) 228, 495, 946, 1993
BspCNI CTCAG 6 cut(s) 425, 849, 1018, 2620, 2994, 3156
BspFNI CGCG 1 cut(s) 2021
BspLI GGNNCC 6 cut(s) 438, 1220, 1345, 1396, 1758, 1759
BspMAI CTGCAG 1 cut(s) 3072
BspMI ACCTGC 2 cut(s) 1327, 2169
BspPI GGATC 6 cut(s) 134, 1312, 1825, 1963, 2486, 2727
BspTI CTTAAG 1 cut(s) 386
BsrDI GCAATG 6 cut(s) 33, 73, 2198, 2379, 2896, 3333
BsrFI RCCGGY 1 cut(s) 224
BsrGI TGTACA 1 cut(s) 2514
BsrI ACTGG 8 cut(s) 453, 462, 979, 1717, 1852, 1882, 2113, 3152
BssAI RCCGGY 1 cut(s) 224
BssNAI GTATAC 1 cut(s) 3041
BssT1I CCWWGG 6 cut(s) 276, 618, 796, 1588, 2127, 2233
Bst1107I GTATAC 1 cut(s) 3041
Bst2UI CCWGG 7 cut(s) 77, 369, 548, 856, 923, 1412, 1672
Bst4CI ACNGT 9 cut(s) 10, 815, 1231, 1290, 1892, 2210, 2426, 2953, 3182
Bst6I CTCTTC 2 cut(s) 277, 1476
BstAFI CTTAAG 1 cut(s) 386
BstAUI TGTACA 1 cut(s) 2514
BstBAI YACGTR 1 cut(s) 1922
BstC8I GCNNGC 3 cut(s) 421, 2776, 2932
BstDSI CCRYGG 1 cut(s) 2127
BstEII GGTNACC 1 cut(s) 2801
BstF5I GGATG 5 cut(s) 696, 1118, 2064, 2277, 3148
BstFNI CGCG 1 cut(s) 2021
BstH2I RGCGCY 1 cut(s) 113
BstHHI GCGC 3 cut(s) 112, 2166, 2559
BstMAI GTCTC 4 cut(s) 837, 1549, 2325, 2648
BstMWI GCNNNNNNNGC 3 cut(s) 2657, 2886, 2931
BstNI CCWGG 7 cut(s) 77, 369, 548, 856, 923, 1412, 1672
BstNSI RCATGY 1 cut(s) 610
BstPAI GACNNNNGTC 1 cut(s) 2235
BstPI GGTNACC 1 cut(s) 2801
BstSFI CTRYAG 1 cut(s) 3068
BstSNI TACGTA 1 cut(s) 1922
BstUI CGCG 1 cut(s) 2021
BstV1I GCAGC 3 cut(s) 176, 579, 3100
BstV2I GAAGAC 1 cut(s) 2100
BstX2I RGATCY 6 cut(s) 130, 139, 1304, 1830, 1930, 1955
BstXI CCANNNNNNTGG 2 cut(s) 2759, 2966
BstYI RGATCY 6 cut(s) 130, 139, 1304, 1830, 1930, 1955
BstZ17I GTATAC 1 cut(s) 3041
Bsu36I CCTNAGG 1 cut(s) 2628
BsuI GTATCC 1 cut(s) 2126
BsuRI GGCC 4 cut(s) 228, 495, 946, 1993
BtgI CCRYGG 1 cut(s) 2127
BtrI CACGTC 1 cut(s) 831
BtsCI GGATG 5 cut(s) 696, 1118, 2064, 2277, 3148
BtsI GCAGTG 3 cut(s) 947, 2932, 3065
BtsIMutI CAGTG 5 cut(s) 947, 2660, 2932, 3065, 3159
BtuMI TCGCGA 1 cut(s) 2021
BveI ACCTGC 2 cut(s) 1327, 2169
Cac8I GCNNGC 3 cut(s) 421, 2776, 2932
CaiI CAGNNNCTG 1 cut(s) 2860
CfoI GCGC 3 cut(s) 112, 2166, 2559
Cfr10I RCCGGY 1 cut(s) 224
Cfr13I GGNCC 8 cut(s) 800, 919, 944, 1394, 1682, 1757, 1991, 2903
Cfr9I CCCGGG 1 cut(s) 737
CseI GACGC 1 cut(s) 1351
Csp6I GTAC 6 cut(s) 1743, 1919, 1923, 2211, 2515, 3202
CviQI GTAC 6 cut(s) 1743, 1919, 1923, 2211, 2515, 3202
DrdI GACNNNNNNGTC 1 cut(s) 1755
DseDI GACNNNNNNGTC 1 cut(s) 1755
EaeI YGGCCR 1 cut(s) 226
Eam1104I CTCTTC 2 cut(s) 277, 1476
EarI CTCTTC 2 cut(s) 277, 1476
Ecl136II GAGCTC 1 cut(s) 3089
Eco105I TACGTA 1 cut(s) 1922
Eco130I CCWWGG 6 cut(s) 276, 618, 796, 1588, 2127, 2233
Eco24I GRGCYC 1 cut(s) 3091
Eco47I GGWCC 6 cut(s) 800, 919, 1394, 1682, 1757, 2903
Eco53kI GAGCTC 1 cut(s) 3089
Eco57I CTGAAG 2 cut(s) 1569, 2309
Eco81I CCTNAGG 1 cut(s) 2628
Eco88I CYCGRG 4 cut(s) 737, 881, 2398, 3314
Eco91I GGTNACC 1 cut(s) 2801
EcoICRI GAGCTC 1 cut(s) 3089
EcoO109I RGGNCCY 2 cut(s) 1682, 1757
EcoO65I GGTNACC 1 cut(s) 2801
EcoRI GAATTC 1 cut(s) 2043
EcoRII CCWGG 7 cut(s) 75, 367, 546, 854, 921, 1410, 1670
EcoT14I CCWWGG 6 cut(s) 276, 618, 796, 1588, 2127, 2233
EcoT38I GRGCYC 1 cut(s) 3091
ErhI CCWWGG 6 cut(s) 276, 618, 796, 1588, 2127, 2233
Esp3I CGTCTC 1 cut(s) 837
FalI AAGNNNNNCTT 6 cut(s) 2445, 2477, 2683, 2715, 3370, 3402
FaqI GGGAC 4 cut(s) 370, 1380, 1393, 1743
FbaI TGATCA 1 cut(s) 583
FblI GTMKAC 1 cut(s) 3040
Fnu4HI GCNGC 3 cut(s) 190, 593, 3114
FokI GGATG 5 cut(s) 683, 1105, 2071, 2284, 3135
FriOI GRGCYC 1 cut(s) 3091
Fsp4HI GCNGC 3 cut(s) 190, 593, 3114
FspBI CTAG 9 cut(s) 51, 596, 764, 1133, 1620, 1740, 1928, 2141, 2640
FspI TGCGCA 1 cut(s) 2165
GlaI GCGC 3 cut(s) 111, 2165, 2558
GluI GCNGC 3 cut(s) 190, 593, 3114
GsaI CCCAGC 1 cut(s) 3415
GsuI CTGGAG 3 cut(s) 222, 838, 3055
HaeII RGCGCY 1 cut(s) 113
HaeIII GGCC 4 cut(s) 228, 495, 946, 1993
HapII CCGG 6 cut(s) 225, 257, 738, 1392, 2688, 3375
HgaI GACGC 1 cut(s) 1351
HhaI GCGC 3 cut(s) 112, 2166, 2559
Hin6I GCGC 3 cut(s) 110, 2164, 2557
HinP1I GCGC 3 cut(s) 110, 2164, 2557
HincII GTYRAC 7 cut(s) 647, 1242, 1329, 1490, 2106, 2230, 2956
HindII GTYRAC 7 cut(s) 647, 1242, 1329, 1490, 2106, 2230, 2956
HindIII AAGCTT 7 cut(s) 421, 1257, 1582, 1732, 2257, 2281, 2321
HpaI GTTAAC 2 cut(s) 1242, 1329
HpaII CCGG 6 cut(s) 225, 257, 738, 1392, 2688, 3375
HphI GGTGA 7 cut(s) 392, 1100, 1954, 2774, 2795, 2950, 3235
Hpy99I CGWCG 3 cut(s) 494, 2500, 2785
HpyAV CCTTC 8 cut(s) 153, 306, 935, 1230, 1529, 2318, 2709, 3396
HpyCH4III ACNGT 9 cut(s) 10, 815, 1231, 1290, 1892, 2210, 2426, 2953, 3182
HpyCH4IV ACGT 4 cut(s) 23, 830, 1921, 2595
HpyF10VI GCNNNNNNNGC 3 cut(s) 2657, 2886, 2931
HpySE526I ACGT 4 cut(s) 23, 830, 1921, 2595
HspAI GCGC 3 cut(s) 110, 2164, 2557
KflI GGGWCCC 1 cut(s) 1757
Ksp22I TGATCA 1 cut(s) 583
KspAI GTTAAC 2 cut(s) 1242, 1329
LmnI GCTCC 4 cut(s) 615, 2129, 3086, 3094
Lsp1109I GCAGC 3 cut(s) 176, 579, 3100
LweI GCATC 4 cut(s) 325, 587, 1599, 2405
MaeI CTAG 9 cut(s) 51, 596, 764, 1133, 1620, 1740, 1928, 2141, 2640
MaeII ACGT 4 cut(s) 23, 830, 1921, 2595
MfeI CAATTG 3 cut(s) 193, 1768, 1817
MflI RGATCY 6 cut(s) 130, 139, 1304, 1830, 1930, 1955
MhlI GDGCHC 2 cut(s) 2444, 3091
MlyI GAGTC 3 cut(s) 1064, 1627, 2882
MmeI TCCRAC 5 cut(s) 207, 519, 1213, 2017, 2036
MroXI GAANNNNTTC 6 cut(s) 457, 1007, 1223, 2010, 2698, 3385
MslI CAYNNNNRTG 2 cut(s) 234, 1403
MspCI CTTAAG 1 cut(s) 386
MspI CCGG 6 cut(s) 225, 257, 738, 1392, 2688, 3375
MunI CAATTG 3 cut(s) 193, 1768, 1817
Mva1269I GAATGC 1 cut(s) 657
MvaI CCWGG 7 cut(s) 77, 369, 548, 856, 923, 1412, 1672
MvnI CGCG 1 cut(s) 2021
MwoI GCNNNNNNNGC 3 cut(s) 2657, 2886, 2931
NciI CCSGG 3 cut(s) 257, 738, 739
NcoI CCATGG 1 cut(s) 2127
NlaIV GGNNCC 6 cut(s) 438, 1220, 1345, 1396, 1758, 1759
NmuCI GTSAC 6 cut(s) 598, 1960, 2801, 2938, 3223, 3402
NruI TCGCGA 1 cut(s) 2021
NsbI TGCGCA 1 cut(s) 2165
NspI RCATGY 1 cut(s) 610
PaqCI CACCTGC 1 cut(s) 2169
PasI CCCWGGG 1 cut(s) 1411
PctI GAATGC 1 cut(s) 657
PdmI GAANNNNTTC 6 cut(s) 457, 1007, 1223, 2010, 2698, 3385
PflMI CCANNNNNTGG 1 cut(s) 448
PfoI TCCNGGA 1 cut(s) 854
PkrI GCNGC 3 cut(s) 191, 594, 3115
PleI GAGTC 3 cut(s) 1063, 1627, 2881
PpsI GAGTC 3 cut(s) 1063, 1627, 2881
Ppu21I YACGTR 1 cut(s) 1922
PpuMI RGGWCCY 2 cut(s) 1682, 1757
PshAI GACNNNNGTC 1 cut(s) 2235
Psp124BI GAGCTC 1 cut(s) 3091
Psp5II RGGWCCY 2 cut(s) 1682, 1757
Psp6I CCWGG 7 cut(s) 75, 367, 546, 854, 921, 1410, 1670
PspEI GGTNACC 1 cut(s) 2801
PspFI CCCAGC 1 cut(s) 3411
PspGI CCWGG 7 cut(s) 75, 367, 546, 854, 921, 1410, 1670
PspN4I GGNNCC 6 cut(s) 438, 1220, 1345, 1396, 1758, 1759
PspPI GGNCC 8 cut(s) 800, 919, 944, 1394, 1682, 1757, 1991, 2903
PspPPI RGGWCCY 2 cut(s) 1682, 1757
PsrI GAACNNNNNNTAC 4 cut(s) 2801, 2833, 3031, 3063
PstI CTGCAG 1 cut(s) 3072
PstNI CAGNNNCTG 1 cut(s) 2860
PsuI RGATCY 6 cut(s) 130, 139, 1304, 1830, 1930, 1955
RruI TCGCGA 1 cut(s) 2021
RsaI GTAC 6 cut(s) 1744, 1920, 1924, 2212, 2516, 3203
RsaNI GTAC 6 cut(s) 1743, 1919, 1923, 2211, 2515, 3202
RseI CAYNNNNRTG 2 cut(s) 234, 1403
SacI GAGCTC 1 cut(s) 3091
SatI GCNGC 3 cut(s) 190, 593, 3114
Sau96I GGNCC 8 cut(s) 800, 919, 944, 1394, 1682, 1757, 1991, 2903
SchI GAGTC 3 cut(s) 1064, 1627, 2882
SduI GDGCHC 2 cut(s) 2444, 3091
SfaNI GCATC 4 cut(s) 325, 587, 1599, 2405
SfcI CTRYAG 1 cut(s) 3068
SinI GGWCC 6 cut(s) 800, 919, 1394, 1682, 1757, 2903
SmaI CCCGGG 1 cut(s) 739
SmiMI CAYNNNNRTG 2 cut(s) 234, 1403
SmlI CTYRAG 5 cut(s) 171, 386, 1052, 1357, 1870
SmoI CTYRAG 5 cut(s) 171, 386, 1052, 1357, 1870
SnaBI TACGTA 1 cut(s) 1922
SpeI ACTAGT 3 cut(s) 50, 1619, 2639
SsiI CCGC 4 cut(s) 2528, 2850, 2901, 3215
SspI AATATT 1 cut(s) 2116
SspMI CTAG 9 cut(s) 51, 596, 764, 1133, 1620, 1740, 1928, 2141, 2640
SstI GAGCTC 1 cut(s) 3091
StyI CCWWGG 6 cut(s) 276, 618, 796, 1588, 2127, 2233
TaaI ACNGT 9 cut(s) 10, 815, 1231, 1290, 1892, 2210, 2426, 2953, 3182
TaiI ACGT 4 cut(s) 26, 833, 1924, 2598
TaqI TCGA 2 cut(s) 1624, 1859
TatI WGTACW 3 cut(s) 1742, 2210, 2514
TscAI CASTG 5 cut(s) 954, 2667, 2932, 3072, 3159
TseFI GTSAC 6 cut(s) 598, 1960, 2801, 2938, 3223, 3402
TseI GCWGC 3 cut(s) 189, 592, 3113
Tsp45I GTSAC 6 cut(s) 598, 1960, 2801, 2938, 3223, 3402
TspGWI ACGGA 4 cut(s) 1611, 2328, 2484, 2851
TspMI CCCGGG 1 cut(s) 737
TspRI CASTG 5 cut(s) 954, 2667, 2932, 3072, 3159
Van91I CCANNNNNTGG 1 cut(s) 448
Vha464I CTTAAG 1 cut(s) 386
VpaK11BI GGWCC 6 cut(s) 800, 919, 1394, 1682, 1757, 2903
XapI RAATTY 8 cut(s) 719, 859, 1092, 1600, 1688, 2043, 2086, 2766
XceI RCATGY 1 cut(s) 610
XcmI CCANNNNNNNNNTGG 2 cut(s) 274, 479
XmaI CCCGGG 1 cut(s) 737
XmiI GTMKAC 1 cut(s) 3040
XmnI GAANNNNTTC 6 cut(s) 457, 1007, 1223, 2010, 2698, 3385
XspI CTAG 9 cut(s) 51, 596, 764, 1133, 1620, 1740, 1928, 2141, 2640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.