MD01G1172300.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Reverse (-)
27441115 .. 27442945
1831 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1172300.v1.1.491

Sequence Viewer

Length: 1734 bp
ATGGAGAGCCCCATGAGAGCTGGTTTACCTCTGATGATCAGGTTTCTAACTATTGCAACCATTATTCCATTTTTCAGTGTCGGTTTACGCAGCGGAAGTCCGGGTGTACCTTGCAAAGAAGGTCAGAAACGAGCGCTTCTGATGTTGAAGAAAGATCTTAAGGATCCTTCAAATCGGCTCTTGTCATGGACTAGTTATGGAGACTGTTGCAATTGGACTGGAGTTGTCTGTGATCACTTAACTGGTCACATTCGCGAGCTCCGCCTCACTAATCCCAATTCTCATCAGGATATCCATGAGTCTTATGGAGATAACTACTATAGGAATACTTGGTTGGGTGGTAAGGTAAATCCTTCTTTGCTCCATTTGAAGAATCTTAACTACTTGGACTTGAGTTACAACAAGTTTCAAGGATTGCAGATTCCTAGCTTCTTTGGTTCTCTTAAAACTTTACGATATCTTAACATCTCAGAAGCTGGTTTTCAAGGATTAATTCCTCCTCAATTGGGAAACCTCACAAATCTACGGTATCTTGGCCTCCGTGATGACACACTGAAGGCTGAGAATCTCGAATGGATTTCTGGTCTTCCCCACTTGAAACACCTCGACATGAGTTTTGTTAATCTTAGCAAATCATCTAACTGGTTGAAAACAGTGAACATGCTCCCCTCTTTGGTAGAGTTACGTATGGTCTATTGTCAACTTGATCACATTCCCCCTCTTCTGCCTATCATAAATTTTACTTCCCTTTCCATCCTCGATCTTTTCGGGAACCCATTTAATTCTTTGATGCCTAGATGGGTTTTTAGTCTTACAAATCTAGTTTCTCTTTCTCTCAAAAGTTGTGGTTTCCAAGGTTCAGTTTCCATCCATCCCTCCACAAATGCCACTACATCTCTCAAGGGAACTGATCTTTCGTTGGACAAGCTTTGTGAGTTGATTCATCTTGATCTGTCACACAACAGGTTCCATGGAAGTGTATCTGAAGTCTTTGAGAGTTTGTCCGGGTGCAGTTCATTTCGAATAGAGTCATTGTTGTTGGGGTCTAATAATCTTTCAGGTCATTTGACAGAGCATGTTGAAAAGTTTAAAAGAATAATCCACCTTGATCTCTCGTGCAATTCAATATCAGGTCTCATCCTAGAGTCATTAGGAAATCTATCGCACTTAACCCGATTGCTCATTTCTCACAACCAGTTTAAGGGAGCTCTTCCAGAAGAGGATTGGCTTCCTCCTTTTCAACTTCAGCGTTTATGGTTGGATTGTTGGCATCTAGGGCCTGATTTTCCTATGTGGCTTCAAACACAAACGCAATTGGTGGTTCTAAGCCTACCCAATGCAGGAATTTCAGATACCATTCCAACTTGGTTTTGGAACATATCTTTGCAGTTGCATACTGTAAATCTCTCCCACAACCAAATGCATGGGAAGCTTCAAAATATAGTTGTGGGGCGCCATATTGACCTAAGTTCTAACCAGTTCAATGGGTCATTGCCTCTGGTTTCCTCCTCAGTAAGGATACTAAATCTTGCAAACTCTTCACTTTCTGGATCTCTCATCCACTTCTTCGGTGATAGGATGGACGAGCCAAAAGAACTTACTTCTGTATATCTTCGGGACAATCTTCTCACTGGAGAAATTCCTAATTGTTTGATGAACTGGAAATTGTTGTTAACTTTAAACTTGAAAGGCAACAAGTTAACTGGGAATATTCCAATCTCCATAGGGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

578

Amino Acids

64.83

Weight (kDa)

7.99

Isoelectric Point (pI)

36.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 41 - 78 1.9e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 121 - 280 3e-10 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1452
AccII CGCG 1 cut(s) 255
AciI CCGC 2 cut(s) 93, 262
AclWI GGATC 3 cut(s) 158, 171, 1558
AcsI RAATTY 3 cut(s) 736, 1344, 1638
AcuI CTGAAG 3 cut(s) 575, 1005, 1229
AcyI GRCGYC 1 cut(s) 1453
AfaI GTAC 2 cut(s) 108, 1730
AfeI AGCGCT 1 cut(s) 135
AfiI CCNNNNNNNGG 5 cut(s) 506, 673, 1201, 1340, 1515
AflII CTTAAG 1 cut(s) 158
AhlI ACTAGT 1 cut(s) 191
AjuI GAANNNNNNNTTGG 2 cut(s) 317, 349
AluBI AGCT 7 cut(s) 20, 259, 429, 476, 928, 1208, 1432
AluI AGCT 7 cut(s) 20, 259, 429, 476, 928, 1208, 1432
Alw21I GWGCWC 2 cut(s) 261, 1210
Alw26I GTCTC 2 cut(s) 195, 1139
AlwI GGATC 3 cut(s) 158, 171, 1558
AlwNI CAGNNNCTG 1 cut(s) 476
Aor51HI AGCGCT 1 cut(s) 135
AoxI GGCC 2 cut(s) 535, 1277
ApeKI GCWGC 1 cut(s) 90
ApoI RAATTY 3 cut(s) 736, 1344, 1638
ArsI GACNNNNNNTTYG 2 cut(s) 599, 631
AseI ATTAAT 1 cut(s) 491
AspLEI GCGC 2 cut(s) 136, 1455
AspS9I GGNCC 1 cut(s) 1277
AsuC2I CCSGG 2 cut(s) 102, 1006
AsuHPI GGTGA 1 cut(s) 1583
AsuII TTCGAA 1 cut(s) 1021
BamHI GGATCC 1 cut(s) 163
BanI GGYRCC 1 cut(s) 1452
BanII GRGCYC 3 cut(s) 11, 261, 1210
BauI CACGAG 1 cut(s) 1114
BbsI GAAGAC 1 cut(s) 578
Bbv12I GWGCWC 2 cut(s) 261, 1210
BbvI GCAGC 1 cut(s) 102
BccI CCATC 5 cut(s) 761, 792, 875, 879, 1573
BciVI GTATCC 1 cut(s) 1512
BclI TGATCA 3 cut(s) 36, 232, 706
BcnI CCSGG 2 cut(s) 102, 1006
BcoDI GTCTC 2 cut(s) 195, 1139
BcuI ACTAGT 1 cut(s) 191
BfaI CTAG 6 cut(s) 192, 426, 795, 821, 1142, 1274
BfmI CTRYAG 1 cut(s) 319
BfoI RGCGCY 2 cut(s) 137, 1456
BfrI CTTAAG 1 cut(s) 158
BfuI GTATCC 1 cut(s) 1512
BglII AGATCT 1 cut(s) 154
BisI GCNGC 1 cut(s) 91
BlsI GCNGC 1 cut(s) 92
Bme1390I CCNGG 2 cut(s) 102, 1006
BmgT120I GGNCC 1 cut(s) 1277
BmiI GGNNCC 4 cut(s) 165, 773, 968, 1454
BmrFI CCNGG 2 cut(s) 102, 1006
BmrI ACTGGG 1 cut(s) 1713
BmsI GCATC 2 cut(s) 780, 1279
BmuI ACTGGG 1 cut(s) 1713
BpiI GAAGAC 1 cut(s) 578
BpmI CTGGAG 2 cut(s) 240, 1653
Bpu14I TTCGAA 1 cut(s) 1021
BpuEI CTTGAG 2 cut(s) 412, 884
BpuMI CCSGG 2 cut(s) 102, 1006
BsaAI YACGTR 1 cut(s) 686
BsaHI GRCGYC 1 cut(s) 1453
BsaI GGTCTC 1 cut(s) 1139
BsaJI CCNNGG 2 cut(s) 853, 970
Bsc4I CCNNNNNNNGG 5 cut(s) 506, 673, 1201, 1340, 1515
Bse1I ACTGG 8 cut(s) 223, 247, 647, 1195, 1477, 1636, 1664, 1708
Bse3DI GCAATG 1 cut(s) 1490
BseDI CCNNGG 2 cut(s) 853, 970
BseGI GGATG 6 cut(s) 753, 867, 871, 1137, 1557, 1584
BseLI CCNNNNNNNGG 5 cut(s) 506, 673, 1201, 1340, 1515
BseMI GCAATG 1 cut(s) 1490
BseMII CTCAG 3 cut(s) 483, 552, 1524
BseNI ACTGG 8 cut(s) 223, 247, 647, 1195, 1477, 1636, 1664, 1708
BseRI GAGGAG 2 cut(s) 489, 1498
BseXI GCAGC 1 cut(s) 102
BsgI GTGCAG 1 cut(s) 1030
Bsh1236I CGCG 1 cut(s) 255
BshFI GGCC 2 cut(s) 537, 1279
BshNI GGYRCC 1 cut(s) 1452
BsiHKAI GWGCWC 2 cut(s) 261, 1210
BsiSI CCGG 2 cut(s) 101, 1005
BslFI GGGAC 1 cut(s) 1631
BslI CCNNNNNNNGG 5 cut(s) 506, 673, 1201, 1340, 1515
BsmAI GTCTC 2 cut(s) 195, 1139
BsmFI GGGAC 1 cut(s) 1631
BsnI GGCC 2 cut(s) 537, 1279
Bso31I GGTCTC 1 cut(s) 1139
Bsp119I TTCGAA 1 cut(s) 1021
Bsp1286I GDGCHC 3 cut(s) 11, 261, 1210
Bsp19I CCATGG 1 cut(s) 970
Bsp68I TCGCGA 1 cut(s) 255
BspACI CCGC 2 cut(s) 93, 262
BspANI GGCC 2 cut(s) 537, 1279
BspCNI CTCAG 3 cut(s) 482, 553, 1523
BspFNI CGCG 1 cut(s) 255
BspLI GGNNCC 4 cut(s) 165, 773, 968, 1454
BspPI GGATC 3 cut(s) 158, 171, 1558
BspQI GCTCTTC 1 cut(s) 1215
BspT104I TTCGAA 1 cut(s) 1021
BspT107I GGYRCC 1 cut(s) 1452
BspTI CTTAAG 1 cut(s) 158
BspTNI GGTCTC 1 cut(s) 1139
BsrDI GCAATG 1 cut(s) 1490
BsrI ACTGG 8 cut(s) 223, 247, 647, 1195, 1477, 1636, 1664, 1708
BssECI CCNNGG 2 cut(s) 853, 970
BssNI GRCGYC 1 cut(s) 1453
BssSI CACGAG 1 cut(s) 1114
BssT1I CCWWGG 2 cut(s) 853, 970
Bst2BI CACGAG 1 cut(s) 1114
Bst4CI ACNGT 4 cut(s) 206, 528, 655, 1399
Bst6I CTCTTC 4 cut(s) 726, 1212, 1215, 1543
BstACI GRCGYC 1 cut(s) 1453
BstAFI CTTAAG 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 686
BstBI TTCGAA 1 cut(s) 1021
BstC8I GCNNGC 1 cut(s) 257
BstDEI CTNAG 6 cut(s) 469, 561, 626, 1325, 1466, 1510
BstDSI CCRYGG 1 cut(s) 970
BstENI CCTNNNNNAGG 1 cut(s) 1513
BstF5I GGATG 6 cut(s) 753, 867, 871, 1137, 1557, 1584
BstFNI CGCG 1 cut(s) 255
BstH2I RGCGCY 2 cut(s) 137, 1456
BstHHI GCGC 2 cut(s) 136, 1455
BstMAI GTCTC 2 cut(s) 195, 1139
BstMWI GCNNNNNNNGC 3 cut(s) 261, 1276, 1429
BstNSI RCATGY 2 cut(s) 664, 1079
BstSCI CCNGG 2 cut(s) 100, 1004
BstSFI CTRYAG 1 cut(s) 319
BstSNI TACGTA 1 cut(s) 686
BstUI CGCG 1 cut(s) 255
BstV1I GCAGC 1 cut(s) 102
BstV2I GAAGAC 1 cut(s) 578
BstX2I RGATCY 3 cut(s) 154, 163, 1550
BstXI CCANNNNNNTGG 2 cut(s) 1424, 1484
BstYI RGATCY 3 cut(s) 154, 163, 1550
BsuI GTATCC 1 cut(s) 1512
BsuRI GGCC 2 cut(s) 537, 1279
BtgI CCRYGG 1 cut(s) 970
BtsCI GGATG 6 cut(s) 753, 867, 871, 1137, 1557, 1584
BtsIMutI CAGTG 4 cut(s) 82, 551, 660, 1629
BtuMI TCGCGA 1 cut(s) 255
Cac8I GCNNGC 1 cut(s) 257
CaiI CAGNNNCTG 1 cut(s) 476
CfoI GCGC 2 cut(s) 136, 1455
Cfr13I GGNCC 1 cut(s) 1277
Csp6I GTAC 2 cut(s) 107, 1729
CspCI CAANNNNNGTGG 2 cut(s) 826, 861
CviAII CATG 8 cut(s) 13, 186, 296, 610, 661, 971, 1076, 1424
CviQI GTAC 2 cut(s) 107, 1729
DdeI CTNAG 6 cut(s) 469, 561, 626, 1325, 1466, 1510
DinI GGCGCC 1 cut(s) 1454
DraI TTTAAA 2 cut(s) 1090, 1680
Eam1104I CTCTTC 4 cut(s) 726, 1212, 1215, 1543
EarI CTCTTC 4 cut(s) 726, 1212, 1215, 1543
EciI GGCGGA 1 cut(s) 251
Ecl136II GAGCTC 2 cut(s) 259, 1208
Eco105I TACGTA 1 cut(s) 686
Eco130I CCWWGG 2 cut(s) 853, 970
Eco24I GRGCYC 3 cut(s) 11, 261, 1210
Eco31I GGTCTC 1 cut(s) 1139
Eco32I GATATC 2 cut(s) 292, 458
Eco47III AGCGCT 1 cut(s) 135
Eco53kI GAGCTC 2 cut(s) 259, 1208
Eco57I CTGAAG 3 cut(s) 575, 1005, 1229
EcoICRI GAGCTC 2 cut(s) 259, 1208
EcoNI CCTNNNNNAGG 1 cut(s) 1513
EcoO109I RGGNCCY 1 cut(s) 1277
EcoRV GATATC 2 cut(s) 292, 458
EcoT14I CCWWGG 2 cut(s) 853, 970
EcoT22I ATGCAT 1 cut(s) 1425
EcoT38I GRGCYC 3 cut(s) 11, 261, 1210
EgeI GGCGCC 1 cut(s) 1454
EheI GGCGCC 1 cut(s) 1454
ErhI CCWWGG 2 cut(s) 853, 970
FaeI CATG 8 cut(s) 16, 189, 299, 613, 664, 974, 1079, 1427
FaqI GGGAC 1 cut(s) 1631
FatI CATG 8 cut(s) 12, 185, 295, 609, 660, 970, 1075, 1423
FbaI TGATCA 3 cut(s) 36, 232, 706
Fnu4HI GCNGC 1 cut(s) 91
FokI GGATG 6 cut(s) 740, 854, 858, 1124, 1544, 1591
FriOI GRGCYC 3 cut(s) 11, 261, 1210
Fsp4HI GCNGC 1 cut(s) 91
FspBI CTAG 6 cut(s) 192, 426, 795, 821, 1142, 1274
GlaI GCGC 2 cut(s) 135, 1454
GluI GCNGC 1 cut(s) 91
GsuI CTGGAG 2 cut(s) 240, 1653
HaeII RGCGCY 2 cut(s) 137, 1456
HaeIII GGCC 2 cut(s) 537, 1279
HapII CCGG 2 cut(s) 101, 1005
HhaI GCGC 2 cut(s) 136, 1455
Hin1I GRCGYC 1 cut(s) 1453
Hin1II CATG 8 cut(s) 16, 189, 299, 613, 664, 974, 1079, 1427
Hin6I GCGC 2 cut(s) 134, 1453
HinP1I GCGC 2 cut(s) 134, 1453
HincII GTYRAC 3 cut(s) 701, 1674, 1701
HindII GTYRAC 3 cut(s) 701, 1674, 1701
HindIII AAGCTT 2 cut(s) 926, 1430
HinfI GANTC 7 cut(s) 299, 373, 421, 565, 940, 1028, 1145
HpaI GTTAAC 2 cut(s) 1674, 1701
HpaII CCGG 2 cut(s) 101, 1005
HphI GGTGA 1 cut(s) 1583
Hpy166II GTNNAC 7 cut(s) 26, 86, 107, 658, 701, 1674, 1701
Hpy188I TCNGA 6 cut(s) 33, 126, 141, 472, 985, 1351
Hpy188III TCNNGA 8 cut(s) 254, 287, 569, 769, 947, 1214, 1548, 1616
Hpy8I GTNNAC 7 cut(s) 26, 86, 107, 658, 701, 1674, 1701
HpyAV CCTTC 4 cut(s) 113, 177, 363, 550
HpyCH4III ACNGT 4 cut(s) 206, 528, 655, 1399
HpyCH4IV ACGT 1 cut(s) 685
HpyF10VI GCNNNNNNNGC 3 cut(s) 261, 1276, 1429
HpyF3I CTNAG 6 cut(s) 469, 561, 626, 1325, 1466, 1510
HpySE526I ACGT 1 cut(s) 685
Hsp92I GRCGYC 1 cut(s) 1453
Hsp92II CATG 8 cut(s) 16, 189, 299, 613, 664, 974, 1079, 1427
HspAI GCGC 2 cut(s) 134, 1453
KasI GGCGCC 1 cut(s) 1452
Ksp22I TGATCA 3 cut(s) 36, 232, 706
KspAI GTTAAC 2 cut(s) 1674, 1701
LguI GCTCTTC 1 cut(s) 1215
LmnI GCTCC 4 cut(s) 264, 366, 669, 1205
Lsp1109I GCAGC 1 cut(s) 102
LweI GCATC 2 cut(s) 780, 1279
MaeI CTAG 6 cut(s) 192, 426, 795, 821, 1142, 1274
MaeII ACGT 1 cut(s) 685
MaeIII GTNAC 4 cut(s) 245, 395, 681, 954
MfeI CAATTG 3 cut(s) 211, 503, 1313
MflI RGATCY 3 cut(s) 154, 163, 1550
MhlI GDGCHC 3 cut(s) 11, 261, 1210
Mly113I GGCGCC 1 cut(s) 1453
MlyI GAGTC 3 cut(s) 308, 1037, 1154
MmeI TCCRAC 3 cut(s) 900, 1239, 1385
Mph1103I ATGCAT 1 cut(s) 1425
MslI CAYNNNNRTG 1 cut(s) 975
MspA1I CMGCKG 1 cut(s) 93
MspCI CTTAAG 1 cut(s) 158
MspI CCGG 2 cut(s) 101, 1005
MspR9I CCNGG 2 cut(s) 102, 1006
MunI CAATTG 3 cut(s) 211, 503, 1313
MvnI CGCG 1 cut(s) 255
MwoI GCNNNNNNNGC 3 cut(s) 261, 1276, 1429
NarI GGCGCC 1 cut(s) 1453
NciI CCSGG 2 cut(s) 102, 1006
NcoI CCATGG 1 cut(s) 970
NlaIII CATG 8 cut(s) 16, 189, 299, 613, 664, 974, 1079, 1427
NlaIV GGNNCC 4 cut(s) 165, 773, 968, 1454
NmuCI GTSAC 2 cut(s) 245, 954
NruI TCGCGA 1 cut(s) 255
NsiI ATGCAT 1 cut(s) 1425
NspI RCATGY 2 cut(s) 664, 1079
NspV TTCGAA 1 cut(s) 1021
PciSI GCTCTTC 1 cut(s) 1215
PfeI GAWTC 4 cut(s) 373, 421, 565, 940
PkrI GCNGC 1 cut(s) 92
PleI GAGTC 3 cut(s) 307, 1036, 1153
PluTI GGCGCC 1 cut(s) 1456
PpsI GAGTC 3 cut(s) 307, 1036, 1153
Ppu21I YACGTR 1 cut(s) 686
PshBI ATTAAT 1 cut(s) 491
Psp124BI GAGCTC 2 cut(s) 261, 1210
PspN4I GGNNCC 4 cut(s) 165, 773, 968, 1454
PspPI GGNCC 1 cut(s) 1277
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 3 cut(s) 154, 163, 1550
RruI TCGCGA 1 cut(s) 255
RsaI GTAC 2 cut(s) 108, 1730
RsaNI GTAC 2 cut(s) 107, 1729
RseI CAYNNNNRTG 1 cut(s) 975
SacI GAGCTC 2 cut(s) 261, 1210
SapI GCTCTTC 1 cut(s) 1215
SatI GCNGC 1 cut(s) 91
Sau96I GGNCC 1 cut(s) 1277
SchI GAGTC 3 cut(s) 308, 1037, 1154
ScrFI CCNGG 2 cut(s) 102, 1006
SduI GDGCHC 3 cut(s) 11, 261, 1210
SfaNI GCATC 2 cut(s) 780, 1279
SfcI CTRYAG 1 cut(s) 319
SfoI GGCGCC 1 cut(s) 1454
SfuI TTCGAA 1 cut(s) 1021
SmiMI CAYNNNNRTG 1 cut(s) 975
SmlI CTYRAG 3 cut(s) 158, 391, 899
SmoI CTYRAG 3 cut(s) 158, 391, 899
SnaBI TACGTA 1 cut(s) 686
SpeI ACTAGT 1 cut(s) 191
SsiI CCGC 2 cut(s) 93, 262
SspDI GGCGCC 1 cut(s) 1452
SspI AATATT 1 cut(s) 1711
SspMI CTAG 6 cut(s) 192, 426, 795, 821, 1142, 1274
SstI GAGCTC 2 cut(s) 261, 1210
StyD4I CCNGG 2 cut(s) 100, 1004
StyI CCWWGG 2 cut(s) 853, 970
TaaI ACNGT 4 cut(s) 206, 528, 655, 1399
TaiI ACGT 1 cut(s) 688
TaqI TCGA 4 cut(s) 570, 606, 759, 1021
TfiI GAWTC 4 cut(s) 373, 421, 565, 940
TscAI CASTG 4 cut(s) 82, 558, 660, 1636
TseFI GTSAC 2 cut(s) 245, 954
TseI GCWGC 1 cut(s) 90
Tsp45I GTSAC 2 cut(s) 245, 954
TspDTI ATGAA 3 cut(s) 932, 1005, 1670
TspGWI ACGGA 1 cut(s) 530
TspRI CASTG 4 cut(s) 82, 558, 660, 1636
Vha464I CTTAAG 1 cut(s) 158
VspI ATTAAT 1 cut(s) 491
XagI CCTNNNNNAGG 1 cut(s) 1513
XapI RAATTY 3 cut(s) 736, 1344, 1638
XceI RCATGY 2 cut(s) 664, 1079
XcmI CCANNNNNNNNNTGG 3 cut(s) 302, 1221, 1368
XspI CTAG 6 cut(s) 192, 426, 795, 821, 1142, 1274
Zsp2I ATGCAT 1 cut(s) 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.