Rroxscaffold_4G00284350

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000281
Physical Location & Seq
Reverse (-)
5992376 .. 5995345
2970 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00284350.1

Sequence Viewer

Length: 2970 bp
ATGGAGAAGTCCATAAGAACCGTCTTACTTCACACGTTACTAACCATTGCAACCATTACTACTAGTATAGGTTCATGCAATGGAAACCTGGGTGTGCCTTGTAGAGAAAGCGAAAAACAAGCGCTTCTCATTTTCAAGCAAGATCTTGAAGATCCTTCAAATCGGCTTTCATCATGGGTTGCTAAAGAAGATTCCAACTGCTGCAATTGGGCTGGAGTTGTCTGTCATTACTCCACCGGCCACATCCATGAGCTACATCTTGATAACCGGGTGGAGTCCAACTCTTCCTTGGGCGGTAAGATAAATCCTTCCCTGCTCAATTTAACGCATCTTACCTACTTGAACCTAAGTAACAATAACTTTCAAGGGACAAAGATTCCTGGCTTCTTTGGTTCTCTTAAGAGTTTAACTCATCTTGACCTCTCAGAAGCAAGCTTCGGAGGAATGGTTCCCCATCAACTGGGAAATCTTTCCAGTCTAAGCCATCTCTTTCTTGGTGGCGACGGCCTGAAAGTTGAGAACCTCCAATGGATTTCTGGTCTTTCTCGGTTGGAACACCTGGACATGAGTGGTGTTAATCTTAGCAAAGCATCTGATCATTGGCTGCTAGTGACAAACATGCTCCCCTCCTTGGTAGAATTACGCATGGTCGATTGTCAACTTGATATCATTCCACTTCTACCTATCGTCAATTTTACTTCACTTGCCATCCTTGATCTTTCTTGGAACGAATTTAGTTCTTTCATTCCCGGGTGGGTTTTCAGTCTCAGAAATCTAGTTTCTCTTCATCTGGTGGGTTGTGGTTTCGAAGGTCCGATTCCCAGCAGTCCACACAATATCACGTCTCTCAGGGAAATTGATCTCTCCGGGAATTTTCTTAGTCTTACGATACCAGAGTGGTTTTATAGTTTTAAGTATCTTGAGTCCTTGATTCTTTCTTTTAATGACTTTCAGGGTGAAATTTCAAGTTCCATTGGGAACTTGACATCCATCATCAACCTAGAGTTGGAGTATAATCTGTTGGGAGGAAAAATCCCAAAGTCATTGGGAAATCTTTGTAACTTGATGAATCTTGATCTTTCAGAGAACCGATTCACGCTTGGAAAGTTATCAGAGTTCTTTGAAACTTTGTCTGTGTGTGGTTCAGATAGAATAAAGTCATTGTCTTTGGGATCTTGTAATCTTTCTGGTCAGTTAATAGAGCAGGTAGGAACCCTTACAAACTTGAGCTTCCTTGATCTTTCTTATAATTCATTATCCGGTCCCATTCCAGTGTCCCTGGGAAATCTGTCATGCTTAGAAACATTAGACATCTCTCAAAATCAGTTCAATGGAATTCTTCCAGAAAGCATTGGTCAACTCAAAATGCTAAAGTCTTTGGATATATCCCATAATTCATTGGAAGGTTTAGTCTCTGACGTTCATTTTACTTGTCTTTCAAGATTGTCAAGCTTCCTTGGAAACGGAAATTCATTGATGCTCAATACTAGTCAAGATTGGACTCCTCCTTTTCAACTTCACGACTTAGGATTAGATTCCTGGCATATAGGTCCTGAATTTCCTATGTGGATTCAGCGACAAGTCCAGTTACAGAATCTAAGCTTATCTAGTACAGGACTTTCGGGTCCCATTCCCAATTGGGTTTGGAACTCATCTTTAGTTTTTCTTGATCTCTCTCACAATCAATTGCATGGGGATATCCAAAGTTTAGTTGCTTCCCAGTTGTTGGTAATTGACTTAAGTTCTAACCAGTTCAATAGTTCATTACCTCTTGTTTCTTCCAATTTAAGAATTCTAGATCTTTCCAATTCATCATTTTCTGGATCTGTCACCCACTTCTTTTGTGATGCAAGAAATGGGCCAAAACAACTTGAATTTCTTCATCTCGCGAACAATCATCTCGTTGGAAGAATTCCTGATTGTTGGATGAATTGGAAAAGCCTGAAAGTTGTGAATTTAAAAAGCAACAATTTGACTGGGAATATTCCAAGCTCCATGGGATACTTGCAAGGCCTCCTATCACTCAACCTGGGCAATAATCAGCTCTCTGGGGAATTACCTCTATCATTGCAGAACTGTACTGAATTGCTGGTTGTAGACCTCGGTCTAAATAAGTTGGAGGGAAGCTTACCAACATGGATGAGAGAAAGCCTTCCAAACTTGATGGTTCTTAACCTTCGTTCAAATAAGCTTCAGGGAGACATTCCGCATGAACTCTGTTATCTCGCACGTCTCCGAATCTTGGACATTGCAAATAACAATCTCTCGGGAACAATACCAAGATGCTTCTACTGTCTTATAACTATGAGCACCTTGTCAGAAGCTATTCTTACTTGGTTAGAAAATTTAGTTTATGCAGTGTACGTAGAGAGTGCGGTCTTGGTGACAAAAGGGACAGAATTGCAGTATGAAAAGATTCAACTGCTAAAAATCATGGACATTTCAGCGAACATTATAACTGGGGAGATTCCTGAGGAACTGACCAACCTCATTGCCTTGCAAACATTGAACTTATCAAACAATCTTTTGAGCGGAAGAATCCCTTCAAAGATTGGTAATATGGGTCAGTTAGAATCTCTTGATTTGTCGAAGAACCATCTTTTTGGTGAAATTCCTGCAAGCATGACCGAAATGACATTTCTGAGTCACTTGAACTTGTCATACAACAATTTGACGGGACGGATTCCAGAAAGCCCTCAGTTTCAGTACTTTGATCAGTCCAACTTTGTTGGAAATGAACTTTGCGGTCCTCCACTACTCATCAAGAATTGCAGTGCAAGCAAGGTGACACCACCAATAGTTGAGCAACAGAGAGGATATGATTTACTTGATGACGAATGGTTCTACCTGAGCTTGGGATTGGGATTCGCGGTTGGTTTTTGGTATATACTTGGTTCCTTGCTGGTAAACATGCCATGGAGCTTTGCTCTTTCGCAAGTCCTCAATAGCATTGTGCTTAAAATGCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

989

Amino Acids

109.31

Weight (kDa)

5.17

Isoelectric Point (pI)

33.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 36 - 75 4.3e-12 Leucine rich repeat N-terminal domain
LRR_14 PF23598 104 - 221 9.1e-09 Leucine-rich repeat region
LRR_8 PF13855 110 - 169 4.5e-07 Leucine rich repeat
LRR_14 PF23598 388 - 467 1.8e-09 Leucine-rich repeat region
LRR_8 PF13855 698 - 755 1e-06 Leucine rich repeat
LRR_8 PF13855 809 - 867 3.9e-06 Leucine rich repeat
LRR_14 PF23598 809 - 886 1.7e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1248, 2300, 2456
AasI GACNNNNNNGTC 1 cut(s) 1623
Acc36I ACCTGC 1 cut(s) 1195
AccB7I CCANNNNNTGG 2 cut(s) 460, 1726
AccBSI CCGCTC 1 cut(s) 2532
AccI GTMKAC 1 cut(s) 2097
AccII CGCG 2 cut(s) 1889, 2870
AciI CCGC 6 cut(s) 294, 2207, 2375, 2532, 2745, 2870
AclWI GGATC 3 cut(s) 146, 1180, 1831
AcoI YGGCCR 1 cut(s) 238
AcuI CTGAAG 1 cut(s) 2177
AfaI GTAC 4 cut(s) 1612, 2080, 2363, 2708
AfeI AGCGCT 1 cut(s) 123
AfiI CCNNNNNNNGG 6 cut(s) 460, 631, 1006, 1726, 2242, 2854
AflII CTTAAG 2 cut(s) 398, 1738
AflIII ACRYGT 1 cut(s) 33
AhlI ACTAGT 2 cut(s) 62, 1487
AjiI CACGTC 2 cut(s) 843, 2231
AjnI CCWGG 6 cut(s) 87, 379, 558, 1278, 1538, 2028
AloI GAACNNNNNNTCC 4 cut(s) 432, 464, 971, 1003
Alw21I GWGCWC 1 cut(s) 2312
Alw26I GTCTC 5 cut(s) 770, 849, 1417, 2193, 2237
AlwI GGATC 3 cut(s) 146, 1180, 1831
Ama87I CYCGRG 2 cut(s) 749, 2266
Aor51HI AGCGCT 1 cut(s) 123
AoxI GGCC 4 cut(s) 238, 505, 1859, 2011
ApeKI GCWGC 2 cut(s) 201, 604
Asp700I GAANNNNTTC 7 cut(s) 469, 1091, 1878, 2151, 2325, 2415, 2542
AspLEI GCGC 1 cut(s) 124
AspS9I GGNCC 6 cut(s) 812, 1262, 1550, 1625, 1859, 2747
AsuC2I CCSGG 4 cut(s) 269, 750, 751, 868
AsuHPI GGTGA 5 cut(s) 968, 1822, 2395, 2618, 2797
AsuII TTCGAA 1 cut(s) 807
AvaI CYCGRG 2 cut(s) 749, 2266
AvaII GGWCC 5 cut(s) 812, 1262, 1550, 1625, 2747
AxyI CCTNAGG 1 cut(s) 2472
BaeI ACNNNNGTAYC 2 cut(s) 881, 914
Bbv12I GWGCWC 1 cut(s) 2312
BbvI GCAGC 2 cut(s) 188, 591
BccI CCATC 6 cut(s) 462, 492, 716, 998, 2158, 2604
BceAI ACGGC 1 cut(s) 520
BciT130I CCWGG 6 cut(s) 89, 381, 560, 1280, 1540, 2030
BciVI GTATCC 1 cut(s) 1994
BclI TGATCA 2 cut(s) 595, 2713
BcnI CCSGG 4 cut(s) 269, 750, 751, 868
BcoDI GTCTC 5 cut(s) 770, 849, 1417, 2193, 2237
BcuI ACTAGT 2 cut(s) 62, 1487
BfaI CTAG 7 cut(s) 63, 608, 776, 1001, 1488, 1608, 1796
BfoI RGCGCY 1 cut(s) 125
BfrI CTTAAG 2 cut(s) 398, 1738
BfuAI ACCTGC 1 cut(s) 1195
BfuI GTATCC 1 cut(s) 1994
BglII AGATCT 2 cut(s) 142, 1798
BisI GCNGC 2 cut(s) 202, 605
BlsI GCNGC 2 cut(s) 203, 606
BmcAI AGTACT 1 cut(s) 2708
Bme18I GGWCC 5 cut(s) 812, 1262, 1550, 1625, 2747
BmeT110I CYCGRG 2 cut(s) 749, 2266
BmgBI CACGTC 2 cut(s) 843, 2231
BmgT120I GGNCC 6 cut(s) 812, 1262, 1550, 1625, 1859, 2747
BmiI GGNNCC 6 cut(s) 450, 1213, 1264, 1626, 1627, 2896
BmrI ACTGGG 4 cut(s) 470, 1714, 1986, 2469
BmsI GCATC 5 cut(s) 337, 599, 1467, 1837, 2273
BmuI ACTGGG 4 cut(s) 470, 1714, 1986, 2469
BoxI GACNNNNGTC 1 cut(s) 2103
BplI GAGNNNNNCTC 6 cut(s) 266, 298, 394, 426, 2911, 2943
BpmI CTGGAG 1 cut(s) 234
Bpu10I CCTNAGC 1 cut(s) 2849
Bpu14I TTCGAA 1 cut(s) 807
BpuEI CTTGAG 2 cut(s) 941, 1246
BpuMI CCSGG 4 cut(s) 269, 750, 751, 868
BsaAI YACGTR 1 cut(s) 2365
BsaWI WCCGGW 1 cut(s) 1259
BsaXI ACNNNNNCTCC 2 cut(s) 432, 462
Bsc4I CCNNNNNNNGG 6 cut(s) 460, 631, 1006, 1726, 2242, 2854
Bse118I RCCGGY 1 cut(s) 236
Bse1I ACTGG 8 cut(s) 465, 474, 1271, 1585, 1720, 1750, 1981, 2464
Bse21I CCTNAGG 1 cut(s) 2472
Bse3DI GCAATG 5 cut(s) 45, 85, 2066, 2247, 2490
BseBI CCWGG 6 cut(s) 89, 381, 560, 1280, 1540, 2030
BseGI GGATG 5 cut(s) 243, 708, 986, 1932, 2145
BseLI CCNNNNNNNGG 6 cut(s) 460, 631, 1006, 1726, 2242, 2854
BseMI GCAATG 5 cut(s) 45, 85, 2066, 2247, 2490
BseMII CTCAG 7 cut(s) 438, 781, 862, 2463, 2633, 2711, 2840
BseNI ACTGG 8 cut(s) 465, 474, 1271, 1585, 1720, 1750, 1981, 2464
BseRI GAGGAG 1 cut(s) 1494
BseXI GCAGC 2 cut(s) 188, 591
BseYI CCCAGC 1 cut(s) 821
Bsh1236I CGCG 2 cut(s) 1889, 2870
BshFI GGCC 4 cut(s) 240, 507, 1861, 2013
BsiHKAI GWGCWC 1 cut(s) 2312
BsiHKCI CYCGRG 2 cut(s) 749, 2266
BsiSI CCGG 5 cut(s) 237, 268, 750, 867, 1260
BslFI GGGAC 6 cut(s) 382, 1248, 1261, 1611, 2407, 2691
BslI CCNNNNNNNGG 6 cut(s) 460, 631, 1006, 1726, 2242, 2854
BsmAI GTCTC 5 cut(s) 770, 849, 1417, 2193, 2237
BsmBI CGTCTC 2 cut(s) 849, 2237
BsmFI GGGAC 6 cut(s) 382, 1248, 1261, 1611, 2407, 2691
BsnI GGCC 4 cut(s) 240, 507, 1861, 2013
BsoBI CYCGRG 2 cut(s) 749, 2266
Bsp119I TTCGAA 1 cut(s) 807
Bsp1286I GDGCHC 1 cut(s) 2312
Bsp19I CCATGG 2 cut(s) 1995, 2915
Bsp68I TCGCGA 1 cut(s) 1889
BspACI CCGC 6 cut(s) 294, 2207, 2375, 2532, 2745, 2870
BspANI GGCC 4 cut(s) 240, 507, 1861, 2013
BspCNI CTCAG 7 cut(s) 437, 780, 861, 2464, 2634, 2710, 2841
BspFNI CGCG 2 cut(s) 1889, 2870
BspLI GGNNCC 6 cut(s) 450, 1213, 1264, 1626, 1627, 2896
BspMI ACCTGC 1 cut(s) 1195
BspPI GGATC 3 cut(s) 146, 1180, 1831
BspT104I TTCGAA 1 cut(s) 807
BspTI CTTAAG 2 cut(s) 398, 1738
BsrBI CCGCTC 1 cut(s) 2532
BsrDI GCAATG 5 cut(s) 45, 85, 2066, 2247, 2490
BsrFI RCCGGY 1 cut(s) 236
BsrI ACTGG 8 cut(s) 465, 474, 1271, 1585, 1720, 1750, 1981, 2464
BssAI RCCGGY 1 cut(s) 236
BssT1I CCWWGG 5 cut(s) 288, 630, 1456, 1995, 2915
Bst2UI CCWGG 6 cut(s) 89, 381, 560, 1280, 1540, 2030
Bst4CI ACNGT 3 cut(s) 22, 2078, 2294
Bst6I CTCTTC 2 cut(s) 289, 789
BstAFI CTTAAG 2 cut(s) 398, 1738
BstBAI YACGTR 1 cut(s) 2365
BstBI TTCGAA 1 cut(s) 807
BstC8I GCNNGC 3 cut(s) 433, 2620, 2779
BstDSI CCRYGG 2 cut(s) 1995, 2915
BstF5I GGATG 5 cut(s) 243, 708, 986, 1932, 2145
BstFNI CGCG 2 cut(s) 1889, 2870
BstH2I RGCGCY 1 cut(s) 125
BstHHI GCGC 1 cut(s) 124
BstMAI GTCTC 5 cut(s) 770, 849, 1417, 2193, 2237
BstMWI GCNNNNNNNGC 2 cut(s) 2778, 2962
BstNI CCWGG 6 cut(s) 89, 381, 560, 1280, 1540, 2030
BstNSI RCATGY 2 cut(s) 622, 2914
BstPAI GACNNNNGTC 1 cut(s) 2103
BstSNI TACGTA 1 cut(s) 2365
BstUI CGCG 2 cut(s) 1889, 2870
BstV1I GCAGC 2 cut(s) 188, 591
BstX2I RGATCY 5 cut(s) 142, 151, 1172, 1798, 1823
BstXI CCANNNNNNTGG 1 cut(s) 2603
BstYI RGATCY 5 cut(s) 142, 151, 1172, 1798, 1823
Bsu36I CCTNAGG 1 cut(s) 2472
BsuI GTATCC 1 cut(s) 1994
BsuRI GGCC 4 cut(s) 240, 507, 1861, 2013
BtgI CCRYGG 2 cut(s) 1995, 2915
BtrI CACGTC 2 cut(s) 843, 2231
BtsCI GGATG 5 cut(s) 243, 708, 986, 1932, 2145
BtsI GCAGTG 2 cut(s) 2364, 2779
BtsIMutI CAGTG 3 cut(s) 1278, 2364, 2779
BtuMI TCGCGA 1 cut(s) 1889
BveI ACCTGC 1 cut(s) 1195
Cac8I GCNNGC 3 cut(s) 433, 2620, 2779
CfoI GCGC 1 cut(s) 124
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 6 cut(s) 812, 1262, 1550, 1625, 1859, 2747
Cfr9I CCCGGG 1 cut(s) 749
Csp6I GTAC 4 cut(s) 1611, 2079, 2362, 2707
CspCI CAANNNNNGTGG 2 cut(s) 1823, 1858
CviQI GTAC 4 cut(s) 1611, 2079, 2362, 2707
DraI TTTAAA 1 cut(s) 1959
DrdI GACNNNNNNGTC 1 cut(s) 1623
DseDI GACNNNNNNGTC 1 cut(s) 1623
EaeI YGGCCR 1 cut(s) 238
Eam1104I CTCTTC 2 cut(s) 289, 789
EarI CTCTTC 2 cut(s) 289, 789
Eco105I TACGTA 1 cut(s) 2365
Eco130I CCWWGG 5 cut(s) 288, 630, 1456, 1995, 2915
Eco147I AGGCCT 1 cut(s) 2013
Eco32I GATATC 2 cut(s) 667, 1699
Eco47I GGWCC 5 cut(s) 812, 1262, 1550, 1625, 2747
Eco47III AGCGCT 1 cut(s) 123
Eco57I CTGAAG 1 cut(s) 2177
Eco81I CCTNAGG 1 cut(s) 2472
Eco88I CYCGRG 2 cut(s) 749, 2266
EcoO109I RGGNCCY 2 cut(s) 1550, 1625
EcoRI GAATTC 3 cut(s) 1335, 1791, 1911
EcoRII CCWGG 6 cut(s) 87, 379, 558, 1278, 1538, 2028
EcoRV GATATC 2 cut(s) 667, 1699
EcoT14I CCWWGG 5 cut(s) 288, 630, 1456, 1995, 2915
ErhI CCWWGG 5 cut(s) 288, 630, 1456, 1995, 2915
Esp3I CGTCTC 2 cut(s) 849, 2237
FalI AAGNNNNNCTT 4 cut(s) 2313, 2345, 2527, 2559
FaqI GGGAC 6 cut(s) 382, 1248, 1261, 1611, 2407, 2691
FbaI TGATCA 2 cut(s) 595, 2713
FblI GTMKAC 1 cut(s) 2097
Fnu4HI GCNGC 2 cut(s) 202, 605
FokI GGATG 5 cut(s) 230, 695, 973, 1939, 2152
Fsp4HI GCNGC 2 cut(s) 202, 605
FspBI CTAG 7 cut(s) 63, 608, 776, 1001, 1488, 1608, 1796
GlaI GCGC 1 cut(s) 123
GluI GCNGC 2 cut(s) 202, 605
GsaI CCCAGC 1 cut(s) 825
GsuI CTGGAG 1 cut(s) 234
HaeII RGCGCY 1 cut(s) 125
HaeIII GGCC 4 cut(s) 240, 507, 1861, 2013
HapII CCGG 5 cut(s) 237, 268, 750, 867, 1260
HhaI GCGC 1 cut(s) 124
Hin6I GCGC 1 cut(s) 122
HinP1I GCGC 1 cut(s) 122
HincII GTYRAC 2 cut(s) 659, 1358
HindII GTYRAC 2 cut(s) 659, 1358
HindIII AAGCTT 5 cut(s) 433, 1450, 1600, 2125, 2189
HpaII CCGG 5 cut(s) 237, 268, 750, 867, 1260
HphI GGTGA 5 cut(s) 968, 1822, 2395, 2618, 2797
Hpy166II GTNNAC 6 cut(s) 659, 830, 1358, 2098, 2362, 2908
Hpy8I GTNNAC 6 cut(s) 659, 830, 1358, 2098, 2362, 2908
Hpy99I CGWCG 1 cut(s) 506
HpyAV CCTTC 7 cut(s) 165, 318, 803, 1397, 2162, 2186, 2553
HpyCH4III ACNGT 3 cut(s) 22, 2078, 2294
HpyCH4IV ACGT 5 cut(s) 35, 842, 1419, 2230, 2364
HpyF10VI GCNNNNNNNGC 2 cut(s) 2778, 2962
HpySE526I ACGT 5 cut(s) 35, 842, 1419, 2230, 2364
HspAI GCGC 1 cut(s) 122
KflI GGGWCCC 1 cut(s) 1625
Ksp22I TGATCA 2 cut(s) 595, 2713
LmnI GCTCC 3 cut(s) 627, 1997, 2919
Lsp1109I GCAGC 2 cut(s) 188, 591
LweI GCATC 5 cut(s) 337, 599, 1467, 1837, 2273
MaeI CTAG 7 cut(s) 63, 608, 776, 1001, 1488, 1608, 1796
MaeII ACGT 5 cut(s) 35, 842, 1419, 2230, 2364
MaeIII GTNAC 9 cut(s) 36, 350, 610, 1058, 1587, 1828, 2383, 2645, 2785
MbiI CCGCTC 1 cut(s) 2532
MfeI CAATTG 3 cut(s) 205, 1636, 1685
MflI RGATCY 5 cut(s) 142, 151, 1172, 1798, 1823
MhlI GDGCHC 1 cut(s) 2312
MlyI GAGTC 4 cut(s) 284, 932, 1495, 2653
MmeI TCCRAC 9 cut(s) 219, 303, 531, 987, 1885, 1904, 2097, 2710, 2745
MroXI GAANNNNTTC 7 cut(s) 469, 1091, 1878, 2151, 2325, 2415, 2542
MslI CAYNNNNRTG 2 cut(s) 246, 1271
MspCI CTTAAG 2 cut(s) 398, 1738
MspI CCGG 5 cut(s) 237, 268, 750, 867, 1260
MunI CAATTG 3 cut(s) 205, 1636, 1685
MvaI CCWGG 6 cut(s) 89, 381, 560, 1280, 1540, 2030
MvnI CGCG 2 cut(s) 1889, 2870
MwoI GCNNNNNNNGC 2 cut(s) 2778, 2962
NciI CCSGG 4 cut(s) 269, 750, 751, 868
NcoI CCATGG 2 cut(s) 1995, 2915
NlaIV GGNNCC 6 cut(s) 450, 1213, 1264, 1626, 1627, 2896
NmuCI GTSAC 5 cut(s) 610, 1828, 2383, 2645, 2785
NruI TCGCGA 1 cut(s) 1889
NspI RCATGY 2 cut(s) 622, 2914
NspV TTCGAA 1 cut(s) 807
PasI CCCWGGG 1 cut(s) 1279
PceI AGGCCT 1 cut(s) 2013
PdmI GAANNNNTTC 7 cut(s) 469, 1091, 1878, 2151, 2325, 2415, 2542
PflMI CCANNNNNTGG 2 cut(s) 460, 1726
PfoI TCCNGGA 1 cut(s) 866
PkrI GCNGC 2 cut(s) 203, 606
PleI GAGTC 4 cut(s) 283, 931, 1495, 2652
PpsI GAGTC 4 cut(s) 283, 931, 1495, 2652
Ppu21I YACGTR 1 cut(s) 2365
PpuMI RGGWCCY 2 cut(s) 1550, 1625
PshAI GACNNNNGTC 1 cut(s) 2103
PsiI TTATAA 3 cut(s) 1248, 2300, 2456
Psp5II RGGWCCY 2 cut(s) 1550, 1625
Psp6I CCWGG 6 cut(s) 87, 379, 558, 1278, 1538, 2028
PspFI CCCAGC 1 cut(s) 821
PspGI CCWGG 6 cut(s) 87, 379, 558, 1278, 1538, 2028
PspN4I GGNNCC 6 cut(s) 450, 1213, 1264, 1626, 1627, 2896
PspPI GGNCC 6 cut(s) 812, 1262, 1550, 1625, 1859, 2747
PspPPI RGGWCCY 2 cut(s) 1550, 1625
PsrI GAACNNNNNNTAC 2 cut(s) 2645, 2677
PsuI RGATCY 5 cut(s) 142, 151, 1172, 1798, 1823
RruI TCGCGA 1 cut(s) 1889
RsaI GTAC 4 cut(s) 1612, 2080, 2363, 2708
RsaNI GTAC 4 cut(s) 1611, 2079, 2362, 2707
RseI CAYNNNNRTG 2 cut(s) 246, 1271
SatI GCNGC 2 cut(s) 202, 605
Sau96I GGNCC 6 cut(s) 812, 1262, 1550, 1625, 1859, 2747
ScaI AGTACT 1 cut(s) 2708
SchI GAGTC 4 cut(s) 284, 932, 1495, 2653
SduI GDGCHC 1 cut(s) 2312
SfaNI GCATC 5 cut(s) 337, 599, 1467, 1837, 2273
SfuI TTCGAA 1 cut(s) 807
SinI GGWCC 5 cut(s) 812, 1262, 1550, 1625, 2747
SmaI CCCGGG 1 cut(s) 751
SmiMI CAYNNNNRTG 2 cut(s) 246, 1271
SmlI CTYRAG 4 cut(s) 398, 920, 1225, 1738
SmoI CTYRAG 4 cut(s) 398, 920, 1225, 1738
SnaBI TACGTA 1 cut(s) 2365
SpeI ACTAGT 2 cut(s) 62, 1487
SseBI AGGCCT 1 cut(s) 2013
SsiI CCGC 6 cut(s) 294, 2207, 2375, 2532, 2745, 2870
SspI AATATT 1 cut(s) 1984
SspMI CTAG 7 cut(s) 63, 608, 776, 1001, 1488, 1608, 1796
StuI AGGCCT 1 cut(s) 2013
StyI CCWWGG 5 cut(s) 288, 630, 1456, 1995, 2915
TaaI ACNGT 3 cut(s) 22, 2078, 2294
TaiI ACGT 5 cut(s) 38, 845, 1422, 2233, 2367
TaqI TCGA 3 cut(s) 651, 807, 2588
TaqII GACCGA 2 cut(s) 2093, 2642
TatI WGTACW 3 cut(s) 1610, 2078, 2706
TscAI CASTG 3 cut(s) 1278, 2364, 2779
TseFI GTSAC 5 cut(s) 610, 1828, 2383, 2645, 2785
TseI GCWGC 2 cut(s) 201, 604
Tsp45I GTSAC 5 cut(s) 610, 1828, 2383, 2645, 2785
TspGWI ACGGA 2 cut(s) 1479, 2695
TspMI CCCGGG 1 cut(s) 749
TspRI CASTG 3 cut(s) 1278, 2364, 2779
Van91I CCANNNNNTGG 2 cut(s) 460, 1726
Vha464I CTTAAG 2 cut(s) 398, 1738
VpaK11BI GGWCC 5 cut(s) 812, 1262, 1550, 1625, 2747
XbaI TCTAGA 1 cut(s) 1795
XceI RCATGY 2 cut(s) 622, 2914
XcmI CCANNNNNNNNNTGG 3 cut(s) 286, 491, 533
XmaI CCCGGG 1 cut(s) 749
XmiI GTMKAC 1 cut(s) 2097
XmnI GAANNNNTTC 7 cut(s) 469, 1091, 1878, 2151, 2325, 2415, 2542
XspI CTAG 7 cut(s) 63, 608, 776, 1001, 1488, 1608, 1796
ZrmI AGTACT 1 cut(s) 2708
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.