pycom01g18380

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
17396112 .. 17400881
4770 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g18380.3

Sequence Viewer

Length: 3927 bp
ATGAAGAGCCCCATAAGAGCTGGTTTACCTTTGATGATCAGGTTTCTAACTATTGCAACCATTATTCCATTCTTCAGTGTCGGTTTACGCAGTGGAAGTCCGGGTGTGCCTTGCAAAGAAGGTCAGAAGCGAGCGCTTCTGATGTTCAAGAGTGATCTTAAGGATCCTTCAAATCGGCTCTCGTCATGGACTAGTGATGGAGACTGCTGCAATTGGACTGGAGTTGTCTGTGATCACTTAACTGGTCATGTTCCCGGGATCCGCCTCACTAATCCCAATTCCCATCAGGACATCCATGAGTCTTTTGGAGATAACTACTACAGTAATACTTGGTTGGGTGGCAAGGTAAATCCTTCCTTGCTCCATTTGAAGCATCTTAAGTACTTGGACTCGAGTTACAACAGGTTTCAAGGATTGCAGATTGCTAGCTTCTTTGGTTCTCTTAAAACTTTAAGATATCTTAACATCTCAGAAGCTGGTGGGCTTTCAGTCTTACAAATCTTGTCTCTCTTTCTCTCAAAGGTTGTGATTTCCAAGGTTCTGTTTCGACCCATCCCTCCACAAATACCACTACTTCTCTCAAGGGAACTTTGCGGAGCTCCACTGGACAAGAATTGCAGTGCAGATAGGATGGTGCCGCCAACAGTTGAGCAAGACAGAGGAGGAGGATACCGTTTACTTGAAGATAAGTGGTTCTACCTGAGCTTGGGACTAGGATTCTTCTTCGGTTTTTGGAGCGTGCTTGGTTCTTTGCTGGTAAACATGCCATGGAGCATTCTTCTTTCTGGATTCCTGAATAGCATTGTATTTAAACTTCACGATGTAGTTTTTCAATACATGGAGGACATAACCATGAGAGTTATTTTTCTTCTAATCAGGGCTCTAGCTATTGCAACCATTTCAATTAGTTTTGGTTCCTGCAATGAAAATCTGGGCTGGACTTCGCTTTGCAAAGAAAGCGAAAAGCAAGCCCTTTTGATGTTCAAGCAAGATCTCAAGGACCCTGCAAATCGGCTTTCTTCGTGGGTTGATGAAGAAGATTCCGACTGTTGTACTTGGACCGGAGTTATCTGCGATGACTTAACTGGTCACATCCACAAGCTTCATCTTGGTAATTCCAACCCTTCATTGAATTTCAACTCTTCCTTGGGTGGCAAGGTAAGTCATTCTTTGCTCAATTTAAAGCATCTCAACTACTTGGACTTAAGCAACAATGATTTTCAAGAAGCACAGGTTCCAAAGTTCTTTGGTTCTCTTAGAAGTTTAAGATATCTTAACCTCTCAAAAGCAGGATTCGCGGGAATGATTCCTCATCAGTTGGGAAATCTCTCGAGTCTACGCTACCTCTCTCTCAGTGATTACAAGCTTAAGGCTGAGAACCTTCAATGGATTTCTGGTCTCTCTCATTTGGAACACCTGGACATGAACTCTGTTGATCTTAGCAAAGCGTCCGACTGGTTGCAAGTCACAAACATGCTCTACTCCTTGAAAGAGTTGCATATGTTCGACTGCAGACTTGATCGCATTCCACCTCTGCCTTCAATCAATTTTACTTCACTTGCCATTCTCGATCTTTCTGCAAACATGTTTGCTTCTTCGATTCCCAAATGGGTTTTCAGTCTTGAAAATCTAGTTTCTCTTTCCCTCGGTAACTGTGGTTTCCAGGGTCCAATCCCAAACTATCCACAAAACATCAGCTCTCTCAGGGAAATTGATTTCTCGTTGAACAATCTCAGTCTTCTGATACCCAAATGGCTGTTCAACCATAAAGACCTTGCTTCTTTGAATCTAGGATACAATTCTCTTGAAGGACCAATTCCACATGGTATTCTAAACATGACTGGTCTTAAAGTTCTTAATCTCGAGTCGAACCTCTTCAATTGTACTATACCTGAATGGCTGTACAGTTTTAGCAATCTCGAGTCCTTGTTTCTTTCTAGCAATCACTTGCAGGGTGAAATTTCAAGCTCTGTTGGAAAATTGACATCCATTGTTGGTCTTCGGTTGGATAATAATCAGCTGGAAGGGAAAATCCCAAAGTCATTGGAAAAGCTTTGTAAGTTGATGGATCTTGATCTGTCAATGAACAACTTCACAGTTGGAAAGGTATCAGAAATCATCGACAGTTTGTCCGGTGTGTGTGCTTCAGCTAAAATGAAGTCTTTGTCGTTGAGTTATTGCAATCTTTCTGGTCCCATTCCAGCGTCACTAAGGAACTTGTCATTCTTATTAAACCTAGACATCTCTGACAATCAATTCAATGGGACTCTTCCAGAAATTATTGGTCAGCTCGAATTTCTTACGAATTTGGACGTGTCATATAATTCATTAGAAGGCGTGGTGTCTGAAGTCCATTTTACTAGGCTCACAAGACTGCTGGAGTTCAATGCAAAAGGAAACTCATTAATTCTGAATACTAGTAAAAACTGGCTTCCTCCTTTTCAACTTCACCAGTTATACTTAGATTCTTGGCATTTGGGGCCTGAATTGCCTAACTGGCTTCGATCACAAACTCAAGTTTGGTCTCTAAGCTTGTCAAATACAGGGCTTTCGGGCGCAATTCCAACTTGGTTTTGGAACTTATCTTCCCAATTACTTTATTTGAATATCTCTCACAATCAATTGTGTGGAGAGGTTCAAGATATGGTGGTTGGCCCTTCGCTAGTGATCGACATGGGTTCTAACCGGTTCAATGGTTCATTACCTTTGGTTCCCTCCACAGTTTATATGCTAGATCTTTCCAATTCATCCTTTTCCGGATCTGTCTCCCGCTTCTTTTGTGATAGTGTGGACGAACCAAAAGAACTCTATCTTCTCAATCTTGGAAAAAATCTTCTCACCGGAAAAATTCCTGATTGTTGGATGAATTGGCAAAACTTGGCGGTCTTAAATTTGGAAAGCAACAATTTAACCGGGTACATTCCAAGCTCCATTGGATACTTGTTCAACCTCAAATCATTGCAGTTGCTCAATAATCAGCTATCCGGAGAAGTACCTCTGTCCCTACAGAACTGTACCGAGTTGTCTGTTGTTGACCTTGGTGGGAATAAGTTTATCGGAAGCTTACCAATGTGGATAGGGAAAAGCCTCTCAAATTTGATGCTTCTGAACTTCCGTTCGAACAAGCTTCATGGAGACATTCCTCATGAACTCTGTAATCTCATAAATCTCCAAATCTTGGACCTCGCGGATAACGATCTTTCAGGGACAATACCAAGATGCTTTCACAATTTTAGTGCCATGGCCACCTTGTCAAATTCGAACAGTCCGAATATTTTGTTGTTTGACATTTTTTCTTATGGGAGGTACCTAGTCGAAGCAATCTTGGTGACCAAGGGTAGAAAAGTGGAATATCGCGAAATTCTTGGATTGGTAACTAGCATGGACCTTTCGAACAACATTATATCCGGAGAGATCCCTGAGGAACTGACCAGCTTACTCCATTTACGTACACTGAACTTATCAAAAAATCTTTTGACTGGAGGAATCCCTTCAAAGATTGGAAACATGAGACGAATTGAATCTCTTGACTTTTCGATGAACCAGCTTGATGGAGAAATTCCTCAAAGCATGAGGAGTTTGACATTCTTGAGTCACTTAAACTTGTCCGACAACAATTTGACGGGACAGATTCCAGAAAGCACTCAGCTCCAGAGCCTTGATCCATCCAGCTTTATCGGCAATGAACTCTGTGGTGCTCCACTCGACGATTGCAGTGCAACAGGGGTGATACCGGCAGCAGTTGAGCAAGACAGAGAATACAATTTGCTTGAAGACAAGTGGTTCTATGTTAGCTTGGGATTGGGATTCGTGTTCGGTTTTTGGAGTTTACTTGGTTTGTTGCTGGTAGACACGCCATTGAGCAATGTTATCTTAAGGTTCCTAAATAGTATAGTAGGAAAAATTTATGGTGTAATTGTTGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1309

Amino Acids

145.47

Weight (kDa)

5.77

Isoelectric Point (pI)

30.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 3306
AccB1I GGYRCC 2 cut(s) 634, 3306
AccB7I CCANNNNNTGG 1 cut(s) 3178
AccI GTMKAC 2 cut(s) 1336, 3849
AccII CGCG 3 cut(s) 1298, 3188, 3357
AccIII TCCGGA 3 cut(s) 2756, 2984, 3407
AciI CCGC 7 cut(s) 262, 594, 638, 1298, 2770, 2882, 3188
AclWI GGATC 8 cut(s) 158, 171, 253, 266, 2076, 2767, 3409, 3656
AcoI YGGCCR 1 cut(s) 3243
AcuI CTGAAG 3 cut(s) 58, 2130, 2367
AfaI GTAC 9 cut(s) 383, 1054, 1885, 1904, 2918, 2994, 3016, 3308, 3451
AfeI AGCGCT 1 cut(s) 135
AfiI CCNNNNNNNGG 2 cut(s) 706, 3178
AflII CTTAAG 5 cut(s) 158, 377, 1204, 1367, 3874
AflIII ACRYGT 2 cut(s) 1584, 2313
AgeI ACCGGT 1 cut(s) 2685
AhdI GACNNNNNGTC 1 cut(s) 2128
AhlI ACTAGT 2 cut(s) 191, 2417
AjiI CACGTC 1 cut(s) 2314
AjnI CCWGG 2 cut(s) 1416, 1662
AjuI GAANNNNNNNTTGG 4 cut(s) 1598, 1630, 1742, 1774
AloI GAACNNNNNNTCC 2 cut(s) 2570, 2602
Alw21I GWGCWC 2 cut(s) 601, 3700
Alw26I GTCTC 7 cut(s) 195, 510, 1403, 2529, 2770, 3129, 3505
AlwI GGATC 8 cut(s) 158, 171, 253, 266, 2076, 2767, 3409, 3656
AlwNI CAGNNNCTG 1 cut(s) 476
Ama87I CYCGRG 5 cut(s) 254, 391, 1330, 1862, 1919
Aor13HI TCCGGA 3 cut(s) 2756, 2984, 3407
Aor51HI AGCGCT 1 cut(s) 135
AoxI GGCC 3 cut(s) 2480, 2653, 3243
ApeKI GCWGC 2 cut(s) 207, 3737
AseI ATTAAT 1 cut(s) 2405
AsiGI ACCGGT 1 cut(s) 2685
Asp700I GAANNNNTTC 3 cut(s) 1874, 2090, 3490
Asp718I GGTACC 1 cut(s) 3306
AspLEI GCGC 2 cut(s) 136, 2558
AspS9I GGNCC 9 cut(s) 1000, 1059, 1667, 1811, 2192, 2480, 2654, 3181, 3385
AsuC2I CCSGG 4 cut(s) 102, 255, 256, 2914
AsuHPI GGTGA 5 cut(s) 1967, 2441, 2830, 3340, 3739
AsuII TTCGAA 3 cut(s) 3119, 3260, 3392
AsuNHI GCTAGC 1 cut(s) 425
AvaI CYCGRG 5 cut(s) 254, 391, 1330, 1862, 1919
AvaII GGWCC 7 cut(s) 1000, 1059, 1667, 1811, 2192, 3181, 3385
AxyI CCTNAGG 1 cut(s) 3420
BalI TGGCCA 1 cut(s) 3245
BamHI GGATCC 2 cut(s) 163, 258
BanI GGYRCC 2 cut(s) 634, 3306
BanII GRGCYC 3 cut(s) 11, 601, 883
BarI GAAGNNNNNNTAC 2 cut(s) 798, 830
BbsI GAAGAC 3 cut(s) 1730, 1991, 3780
Bbv12I GWGCWC 2 cut(s) 601, 3700
BbvI GCAGC 2 cut(s) 194, 3749
BccI CCATC 7 cut(s) 191, 291, 560, 625, 2059, 3545, 3673
BcgI CGANNNNNNTGC 4 cut(s) 1559, 1593, 3698, 3732
BciT130I CCWGG 2 cut(s) 1418, 1664
BciVI GTATCC 3 cut(s) 662, 1787, 2930
BclI TGATCA 2 cut(s) 36, 232
BcnI CCSGG 4 cut(s) 102, 255, 256, 2914
BcoDI GTCTC 7 cut(s) 195, 510, 1403, 2529, 2770, 3129, 3505
BcuI ACTAGT 2 cut(s) 191, 2417
BfmI CTRYAG 3 cut(s) 319, 1510, 3005
BfoI RGCGCY 1 cut(s) 137
BfrI CTTAAG 5 cut(s) 158, 377, 1204, 1367, 3874
BfuI GTATCC 3 cut(s) 662, 1787, 2930
BglI GCCNNNNNGGC 1 cut(s) 2497
BglII AGATCT 2 cut(s) 991, 2734
BisI GCNGC 3 cut(s) 208, 638, 3738
BlsI GCNGC 3 cut(s) 209, 639, 3739
BmcAI AGTACT 1 cut(s) 383
Bme1390I CCNGG 6 cut(s) 102, 255, 256, 1418, 1664, 2914
Bme18I GGWCC 7 cut(s) 1000, 1059, 1667, 1811, 2192, 3181, 3385
BmeRI GACNNNNNGTC 1 cut(s) 2128
BmeT110I CYCGRG 5 cut(s) 254, 391, 1330, 1862, 1919
BmgBI CACGTC 1 cut(s) 2314
BmgT120I GGNCC 9 cut(s) 1000, 1059, 1667, 1811, 2192, 2480, 2654, 3181, 3385
BmrFI CCNGG 6 cut(s) 102, 255, 256, 1418, 1664, 2914
BmsI GCATC 4 cut(s) 382, 1195, 3090, 3209
BmtI GCTAGC 1 cut(s) 429
BpiI GAAGAC 3 cut(s) 1730, 1991, 3780
BpmI CTGGAG 4 cut(s) 240, 2399, 3501, 3635
Bpu10I CCTNAGC 1 cut(s) 701
Bpu14I TTCGAA 3 cut(s) 3119, 3260, 3392
BpuEI CTTGAG 4 cut(s) 565, 980, 2499, 3610
BpuMI CCSGG 4 cut(s) 102, 255, 256, 2914
BsaAI YACGTR 1 cut(s) 3449
BsaBI GATNNNNATC 3 cut(s) 2013, 2073, 3195
BsaI GGTCTC 2 cut(s) 1403, 2529
BsaJI CCNNGG 9 cut(s) 254, 534, 767, 1146, 1645, 1663, 3037, 3240, 3333
BsaWI WCCGGW 7 cut(s) 1061, 2132, 2685, 2756, 2840, 2984, 3407
Bsc4I CCNNNNNNNGG 2 cut(s) 706, 3178
Bse118I RCCGGY 2 cut(s) 2685, 3733
Bse21I CCTNAGG 1 cut(s) 3420
Bse3DI GCAATG 4 cut(s) 928, 2957, 3688, 3871
Bse8I GATNNNNATC 3 cut(s) 2013, 2073, 3195
BseAI TCCGGA 3 cut(s) 2756, 2984, 3407
BseBI CCWGG 2 cut(s) 1418, 1664
BseDI CCNNGG 9 cut(s) 254, 534, 767, 1146, 1645, 1663, 3037, 3240, 3333
BseGI GGATG 8 cut(s) 291, 552, 636, 1092, 1985, 2747, 2868, 3665
BseJI GATNNNNATC 3 cut(s) 2013, 2073, 3195
BseLI CCNNNNNNNGG 2 cut(s) 706, 3178
BseMI GCAATG 4 cut(s) 928, 2957, 3688, 3871
BseMII CTCAG 8 cut(s) 483, 692, 1365, 1366, 1717, 1747, 3411, 3659
BseRI GAGGAG 3 cut(s) 675, 678, 3589
BseXI GCAGC 2 cut(s) 194, 3749
BsgI GTGCAG 1 cut(s) 642
Bsh1236I CGCG 3 cut(s) 1298, 3188, 3357
BshFI GGCC 3 cut(s) 2482, 2655, 3245
BshNI GGYRCC 2 cut(s) 634, 3306
BshTI ACCGGT 1 cut(s) 2685
BsiHKAI GWGCWC 2 cut(s) 601, 3700
BsiHKCI CYCGRG 5 cut(s) 254, 391, 1330, 1862, 1919
BslFI GGGAC 6 cut(s) 723, 2178, 2278, 2986, 3220, 3639
BslI CCNNNNNNNGG 2 cut(s) 706, 3178
BsmAI GTCTC 7 cut(s) 195, 510, 1403, 2529, 2770, 3129, 3505
BsmBI CGTCTC 1 cut(s) 3505
BsmFI GGGAC 6 cut(s) 723, 2178, 2278, 2986, 3220, 3639
BsmI GAATGC 2 cut(s) 774, 1524
BsnI GGCC 3 cut(s) 2482, 2655, 3245
Bso31I GGTCTC 2 cut(s) 1403, 2529
BsoBI CYCGRG 5 cut(s) 254, 391, 1330, 1862, 1919
Bsp119I TTCGAA 3 cut(s) 3119, 3260, 3392
Bsp1286I GDGCHC 4 cut(s) 11, 601, 883, 3700
Bsp13I TCCGGA 3 cut(s) 2756, 2984, 3407
Bsp1407I TGTACA 1 cut(s) 1902
Bsp19I CCATGG 2 cut(s) 767, 3240
Bsp68I TCGCGA 1 cut(s) 3357
BspACI CCGC 7 cut(s) 262, 594, 638, 1298, 2770, 2882, 3188
BspANI GGCC 3 cut(s) 2482, 2655, 3245
BspCNI CTCAG 8 cut(s) 482, 693, 1365, 1366, 1716, 1746, 3412, 3658
BspEI TCCGGA 3 cut(s) 2756, 2984, 3407
BspFNI CGCG 3 cut(s) 1298, 3188, 3357
BspHI TCATGA 1 cut(s) 3145
BspMAI CTGCAG 1 cut(s) 1514
BspOI GCTAGC 1 cut(s) 429
BspPI GGATC 8 cut(s) 158, 171, 253, 266, 2076, 2767, 3409, 3656
BspT104I TTCGAA 3 cut(s) 3119, 3260, 3392
BspT107I GGYRCC 2 cut(s) 634, 3306
BspTI CTTAAG 5 cut(s) 158, 377, 1204, 1367, 3874
BspTNI GGTCTC 2 cut(s) 1403, 2529
BsrDI GCAATG 4 cut(s) 928, 2957, 3688, 3871
BsrFI RCCGGY 2 cut(s) 2685, 3733
BsrGI TGTACA 1 cut(s) 1902
BssAI RCCGGY 2 cut(s) 2685, 3733
BssECI CCNNGG 9 cut(s) 254, 534, 767, 1146, 1645, 1663, 3037, 3240, 3333
BssT1I CCWWGG 6 cut(s) 534, 767, 1146, 3037, 3240, 3333
Bst2UI CCWGG 2 cut(s) 1418, 1664
Bst6I CTCTTC 3 cut(s) 1147, 1880, 2274
BstAFI CTTAAG 5 cut(s) 158, 377, 1204, 1367, 3874
BstAUI TGTACA 1 cut(s) 1902
BstBAI YACGTR 1 cut(s) 3449
BstBI TTCGAA 3 cut(s) 3119, 3260, 3392
BstC8I GCNNGC 4 cut(s) 132, 427, 740, 969
BstDSI CCRYGG 2 cut(s) 767, 3240
BstEII GGTNACC 1 cut(s) 3328
BstF5I GGATG 8 cut(s) 291, 552, 636, 1092, 1985, 2747, 2868, 3665
BstFNI CGCG 3 cut(s) 1298, 3188, 3357
BstH2I RGCGCY 1 cut(s) 137
BstHHI GCGC 2 cut(s) 136, 2558
BstMAI GTCTC 7 cut(s) 195, 510, 1403, 2529, 2770, 3129, 3505
BstMWI GCNNNNNNNGC 6 cut(s) 957, 1295, 2479, 2488, 2497, 3678
BstNI CCWGG 2 cut(s) 1418, 1664
BstNSI RCATGY 3 cut(s) 766, 1477, 1588
BstPI GGTNACC 1 cut(s) 3328
BstSCI CCNGG 6 cut(s) 100, 253, 254, 1416, 1662, 2912
BstSFI CTRYAG 3 cut(s) 319, 1510, 3005
BstSNI TACGTA 1 cut(s) 3449
BstUI CGCG 3 cut(s) 1298, 3188, 3357
BstV1I GCAGC 2 cut(s) 194, 3749
BstV2I GAAGAC 3 cut(s) 1730, 1991, 3780
BstX2I RGATCY 7 cut(s) 163, 258, 991, 2068, 2734, 2759, 3414
BstXI CCANNNNNNTGG 1 cut(s) 3551
BstYI RGATCY 7 cut(s) 163, 258, 991, 2068, 2734, 2759, 3414
Bsu36I CCTNAGG 1 cut(s) 3420
BsuI GTATCC 3 cut(s) 662, 1787, 2930
BsuRI GGCC 3 cut(s) 2482, 2655, 3245
BtgI CCRYGG 2 cut(s) 767, 3240
BtgZI GCGATG 1 cut(s) 1089
BtrI CACGTC 1 cut(s) 2314
BtsCI GGATG 8 cut(s) 291, 552, 636, 1092, 1985, 2747, 2868, 3665
BtsI GCAGTG 3 cut(s) 97, 625, 3721
BtsIMutI CAGTG 7 cut(s) 82, 97, 602, 625, 1360, 3452, 3721
BtuMI TCGCGA 1 cut(s) 3357
Cac8I GCNNGC 4 cut(s) 132, 427, 740, 969
CaiI CAGNNNCTG 1 cut(s) 476
CciI TCATGA 1 cut(s) 3145
CfoI GCGC 2 cut(s) 136, 2558
Cfr10I RCCGGY 2 cut(s) 2685, 3733
Cfr13I GGNCC 9 cut(s) 1000, 1059, 1667, 1811, 2192, 2480, 2654, 3181, 3385
Cfr9I CCCGGG 1 cut(s) 254
CseI GACGC 2 cut(s) 1437, 2193
Csp6I GTAC 9 cut(s) 382, 1053, 1884, 1903, 2917, 2993, 3015, 3307, 3450
CspAI ACCGGT 1 cut(s) 2685
CviQI GTAC 9 cut(s) 382, 1053, 1884, 1903, 2917, 2993, 3015, 3307, 3450
DraI TTTAAA 2 cut(s) 811, 1182
DriI GACNNNNNGTC 1 cut(s) 2128
EaeI YGGCCR 1 cut(s) 3243
Eam1104I CTCTTC 3 cut(s) 1147, 1880, 2274
Eam1105I GACNNNNNGTC 1 cut(s) 2128
EarI CTCTTC 3 cut(s) 1147, 1880, 2274
EciI GGCGGA 1 cut(s) 251
Ecl136II GAGCTC 1 cut(s) 599
Eco105I TACGTA 1 cut(s) 3449
Eco130I CCWWGG 6 cut(s) 534, 767, 1146, 3037, 3240, 3333
Eco24I GRGCYC 3 cut(s) 11, 601, 883
Eco31I GGTCTC 2 cut(s) 1403, 2529
Eco32I GATATC 2 cut(s) 458, 1271
Eco47I GGWCC 7 cut(s) 1000, 1059, 1667, 1811, 2192, 3181, 3385
Eco47III AGCGCT 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 599
Eco57I CTGAAG 3 cut(s) 58, 2130, 2367
Eco81I CCTNAGG 1 cut(s) 3420
Eco88I CYCGRG 5 cut(s) 254, 391, 1330, 1862, 1919
Eco91I GGTNACC 1 cut(s) 3328
EcoICRI GAGCTC 1 cut(s) 599
EcoO109I RGGNCCY 2 cut(s) 1000, 2480
EcoO65I GGTNACC 1 cut(s) 3328
EcoRII CCWGG 2 cut(s) 1416, 1662
EcoRV GATATC 2 cut(s) 458, 1271
EcoT14I CCWWGG 6 cut(s) 534, 767, 1146, 3037, 3240, 3333
EcoT38I GRGCYC 3 cut(s) 11, 601, 883
ErhI CCWWGG 6 cut(s) 534, 767, 1146, 3037, 3240, 3333
Esp3I CGTCTC 1 cut(s) 3505
FalI AAGNNNNNCTT 2 cut(s) 1153, 1185
FaqI GGGAC 6 cut(s) 723, 2178, 2278, 2986, 3220, 3639
FauI CCCGC 2 cut(s) 1291, 2777
FauNDI CATATG 1 cut(s) 1500
FbaI TGATCA 2 cut(s) 36, 232
FblI GTMKAC 2 cut(s) 1336, 3849
Fnu4HI GCNGC 3 cut(s) 208, 638, 3738
FokI GGATG 8 cut(s) 278, 539, 643, 1079, 1972, 2734, 2875, 3652
FriOI GRGCYC 3 cut(s) 11, 601, 883
Fsp4HI GCNGC 3 cut(s) 208, 638, 3738
GlaI GCGC 2 cut(s) 135, 2557
GluI GCNGC 3 cut(s) 208, 638, 3738
GsuI CTGGAG 4 cut(s) 240, 2399, 3501, 3635
HaeII RGCGCY 1 cut(s) 137
HaeIII GGCC 3 cut(s) 2482, 2655, 3245
HgaI GACGC 2 cut(s) 1437, 2193
HhaI GCGC 2 cut(s) 136, 2558
Hin6I GCGC 2 cut(s) 134, 2556
HinP1I GCGC 2 cut(s) 134, 2556
HincII GTYRAC 1 cut(s) 3034
HindII GTYRAC 1 cut(s) 3034
HindIII AAGCTT 6 cut(s) 1100, 1364, 2051, 2530, 3061, 3125
HphI GGTGA 5 cut(s) 1967, 2441, 2830, 3340, 3739
Hpy99I CGWCG 1 cut(s) 3710
HpyCH4IV ACGT 2 cut(s) 2313, 3448
HpyF10VI GCNNNNNNNGC 6 cut(s) 957, 1295, 2479, 2488, 2497, 3678
HpySE526I ACGT 2 cut(s) 2313, 3448
HspAI GCGC 2 cut(s) 134, 2556
Kpn2I TCCGGA 3 cut(s) 2756, 2984, 3407
KpnI GGTACC 1 cut(s) 3310
Ksp22I TGATCA 2 cut(s) 36, 232
LmnI GCTCC 8 cut(s) 366, 596, 604, 735, 771, 2933, 3654, 3703
Lsp1109I GCAGC 2 cut(s) 194, 3749
LweI GCATC 4 cut(s) 382, 1195, 3090, 3209
MaeII ACGT 2 cut(s) 2313, 3448
MaeIII GTNAC 8 cut(s) 395, 1088, 1465, 1649, 2205, 3328, 3373, 3593
MfeI CAATTG 3 cut(s) 211, 1879, 2621
MflI RGATCY 7 cut(s) 163, 258, 991, 2068, 2734, 2759, 3414
MhlI GDGCHC 4 cut(s) 11, 601, 883, 3700
MlsI TGGCCA 1 cut(s) 3245
MluNI TGGCCA 1 cut(s) 3245
MlyI GAGTC 7 cut(s) 308, 383, 1342, 1874, 1931, 2260, 3601
MmeI TCCRAC 9 cut(s) 1068, 1143, 1476, 1954, 1986, 2080, 2588, 2840, 3633
Mox20I TGGCCA 1 cut(s) 3245
MroI TCCGGA 3 cut(s) 2756, 2984, 3407
MroXI GAANNNNTTC 3 cut(s) 1874, 2090, 3490
MscI TGGCCA 1 cut(s) 3245
MslI CAYNNNNRTG 2 cut(s) 851, 1472
Msp20I TGGCCA 1 cut(s) 3245
MspA1I CMGCKG 1 cut(s) 2020
MspCI CTTAAG 5 cut(s) 158, 377, 1204, 1367, 3874
MspR9I CCNGG 6 cut(s) 102, 255, 256, 1418, 1664, 2914
MunI CAATTG 3 cut(s) 211, 1879, 2621
Mva1269I GAATGC 2 cut(s) 774, 1524
MvaI CCWGG 2 cut(s) 1418, 1664
MvnI CGCG 3 cut(s) 1298, 3188, 3357
MwoI GCNNNNNNNGC 6 cut(s) 957, 1295, 2479, 2488, 2497, 3678
NciI CCSGG 4 cut(s) 102, 255, 256, 2914
NcoI CCATGG 2 cut(s) 767, 3240
NdeI CATATG 1 cut(s) 1500
NheI GCTAGC 1 cut(s) 425
NmuCI GTSAC 5 cut(s) 1088, 1465, 2205, 3328, 3593
NruI TCGCGA 1 cut(s) 3357
NspI RCATGY 3 cut(s) 766, 1477, 1588
NspV TTCGAA 3 cut(s) 3119, 3260, 3392
PaeR7I CTCGAG 4 cut(s) 391, 1330, 1862, 1919
PagI TCATGA 1 cut(s) 3145
PciI ACATGT 1 cut(s) 1584
PcsI WCGNNNNNNNCGW 2 cut(s) 3192, 3266
PctI GAATGC 2 cut(s) 774, 1524
PdmI GAANNNNTTC 3 cut(s) 1874, 2090, 3490
PflMI CCANNNNNTGG 1 cut(s) 3178
PinAI ACCGGT 1 cut(s) 2685
PkrI GCNGC 3 cut(s) 209, 639, 3739
PleI GAGTC 7 cut(s) 307, 383, 1341, 1873, 1930, 2260, 3600
PpsI GAGTC 7 cut(s) 307, 383, 1341, 1873, 1930, 2260, 3600
Ppu21I YACGTR 1 cut(s) 3449
PpuMI RGGWCCY 1 cut(s) 1000
PscI ACATGT 1 cut(s) 1584
PshBI ATTAAT 1 cut(s) 2405
Psp124BI GAGCTC 1 cut(s) 601
Psp5II RGGWCCY 1 cut(s) 1000
Psp6I CCWGG 2 cut(s) 1416, 1662
PspEI GGTNACC 1 cut(s) 3328
PspGI CCWGG 2 cut(s) 1416, 1662
PspPI GGNCC 9 cut(s) 1000, 1059, 1667, 1811, 2192, 2480, 2654, 3181, 3385
PspPPI RGGWCCY 1 cut(s) 1000
PspXI VCTCGAGB 1 cut(s) 391
PstI CTGCAG 1 cut(s) 1514
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 7 cut(s) 163, 258, 991, 2068, 2734, 2759, 3414
PvuII CAGCTG 1 cut(s) 2020
RruI TCGCGA 1 cut(s) 3357
RsaI GTAC 9 cut(s) 383, 1054, 1885, 1904, 2918, 2994, 3016, 3308, 3451
RsaNI GTAC 9 cut(s) 382, 1053, 1884, 1903, 2917, 2993, 3015, 3307, 3450
RseI CAYNNNNRTG 2 cut(s) 851, 1472
SacI GAGCTC 1 cut(s) 601
SatI GCNGC 3 cut(s) 208, 638, 3738
Sau96I GGNCC 9 cut(s) 1000, 1059, 1667, 1811, 2192, 2480, 2654, 3181, 3385
ScaI AGTACT 1 cut(s) 383
SchI GAGTC 7 cut(s) 308, 383, 1342, 1874, 1931, 2260, 3601
ScrFI CCNGG 6 cut(s) 102, 255, 256, 1418, 1664, 2914
SduI GDGCHC 4 cut(s) 11, 601, 883, 3700
SfaNI GCATC 4 cut(s) 382, 1195, 3090, 3209
SfcI CTRYAG 3 cut(s) 319, 1510, 3005
Sfr274I CTCGAG 4 cut(s) 391, 1330, 1862, 1919
SfuI TTCGAA 3 cut(s) 3119, 3260, 3392
SinI GGWCC 7 cut(s) 1000, 1059, 1667, 1811, 2192, 3181, 3385
SlaI CTCGAG 4 cut(s) 391, 1330, 1862, 1919
SmaI CCCGGG 1 cut(s) 256
SmiMI CAYNNNNRTG 2 cut(s) 851, 1472
SnaBI TACGTA 1 cut(s) 3449
SpeI ACTAGT 2 cut(s) 191, 2417
SsiI CCGC 7 cut(s) 262, 594, 638, 1298, 2770, 2882, 3188
SspI AATATT 1 cut(s) 3274
SstI GAGCTC 1 cut(s) 601
StyD4I CCNGG 6 cut(s) 100, 253, 254, 1416, 1662, 2912
StyI CCWWGG 6 cut(s) 534, 767, 1146, 3037, 3240, 3333
TaiI ACGT 2 cut(s) 2316, 3451
TatI WGTACW 4 cut(s) 381, 1052, 1883, 1902
TauI GCSGC 1 cut(s) 640
TscAI CASTG 7 cut(s) 82, 97, 609, 625, 1360, 3459, 3721
TseFI GTSAC 5 cut(s) 1088, 1465, 2205, 3328, 3593
TseI GCWGC 2 cut(s) 207, 3737
Tsp45I GTSAC 5 cut(s) 1088, 1465, 2205, 3328, 3593
TspGWI ACGGA 1 cut(s) 3104
TspMI CCCGGG 1 cut(s) 254
TspRI CASTG 7 cut(s) 82, 97, 609, 625, 1360, 3459, 3721
Van91I CCANNNNNTGG 1 cut(s) 3178
Vha464I CTTAAG 5 cut(s) 158, 377, 1204, 1367, 3874
VpaK11BI GGWCC 7 cut(s) 1000, 1059, 1667, 1811, 2192, 3181, 3385
VspI ATTAAT 1 cut(s) 2405
XceI RCATGY 3 cut(s) 766, 1477, 1588
XcmI CCANNNNNNNNNTGG 2 cut(s) 302, 2571
XhoI CTCGAG 4 cut(s) 391, 1330, 1862, 1919
XmaI CCCGGG 1 cut(s) 254
XmiI GTMKAC 2 cut(s) 1336, 3849
XmnI GAANNNNTTC 3 cut(s) 1874, 2090, 3490
ZrmI AGTACT 1 cut(s) 383
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.