MD15G1415000.v1.1

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000281
Physical Location & Seq
Forward (+)
51516661 .. 51519519
2859 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1415000.v1.1.491

Sequence Viewer

Length: 2859 bp
ATGGATAGAGTCATGAGAGTTGTTTCACTAGTCAGGTTTCTATGCATTGCGTCTATTACAGTTAGCTTATGCAAAGGAAACCTGAATGTTCCTTGTAAAGAAAATGAGAGACAAACACTTCTTATGTTCAAGAAAGATCTTAATGATTCTTTAAATATGCTTTCCTCTTGGGTTGGTGAAGGCGATTGTTGCAACTGGACCGGTGTTGCCTGCAGTAATTCAACGGGTCATGTCCATGAACTCCACCTTGCTGGTAATTACAATCAAGTGACTGGTGAGAAACATGGTTTGGGTGGTAAGGTAAATCCTTCTCTGCTCAATTTAAAGCAACTCAGCTACTTGGACTTAAGCTACAATAATTTTGAAGGACTACAAATTCCTAGCTTTCTAGGTTCTCTTAAAGGTTTAAGATATCTTAACCTCTCACATGCAGGGTTCAACGGAACCATTCCTCATCAGTTGGGAAATCTTTCAAGTCTACGTTATCTGGACCTTTCTGAAAACTTGTTGATGGTCGAGAATCTCAAATGGCTCTCTGGTCTTTCTATGTTGAAACATCTTGACATGAGTTATGTAAATCTTTCCAAAGTATCTCATTGGTTACAAGCAAACACACTCCCTTCTCTGCTGGTCGAGTTACATTTGCATGGCTGCGAACTTTATCACATACCAACTGGTGTTGTGAACTTGACAAGTCTTAAAGTTCTTGATCTGTACTTTAACTATTTCAACTCTACCATACCTACATGGTTGTACCGTATGAGCCATCTTGAGTCCCTCGACCTTTCTGGCAATGCTTTGCATGGTGAAATTTTGAGTTCCCTTGGAAACTTGACAGCCCTTGTTGATCTTATATTAGGTTCGAATCAGCTTGAAGGGGAAATCCCAAACTCATTGGGAAATCTTTGTAAGTTGACTTTTGTTGATCTATGGTTCAACAATTTTAGGGGGAGGGTATCAGAAATCTTTGAAAGTTTGTCTCGGTGTAGTTCTGGTCAAATAAATCTTTTAGATCTTTCGAATAATTCTTTTTCAGGTCATTTATCTGATAAGCTAGGAAGTCTTAAAAATTTACGCTATCTTGATCTTTCACTTAATCCAATATCAGGTTCCATTCCAGTGTCCTTGGGCAACCTATCACTCTTAGAGGAGTTGTACATTTTTAGCATGTTATTCGAGGGTATTGTCTCTGAAGTTCATTTTACAAATCTTACAAGGTTGATTAACTTTGTTGCAAATAACAACTCCTTGACTCTTAAAACCAGCCCAAACTGGGTTCCTCCTTTTCAACTTTCTATGTTGACTTTAAGTTTTTGGCGTCTGGACCCATCAGAGTTGCCTGCATGGCTTAAGAGTCAAAAACATTTGATTTCTCTTAACATGTCCAATACAGGAATTTCAGGTACCATTCCAACTTGGTTTTGGAACATTTTTTCGCTTAATGCAGTGACCTTTGTAGATCTCTCATGTAATCAGTTGTTTGGCGAGGTTCCAAACATAGTTTCTGCCAAGTGGCCAAAACAAAAGCCTTCCAATTCTTTGTTTTCAAAAATCGCGATTCGGTTAGGGTTTAACCAGCTCAATGGTTCATTGCCTCTTGTGTCTTCCATAGTGTCTGCATTAGATCTTTCCAATTCATCATTTTCGGGAACTCTCTCTCATTTCTTTTGTGATAGGAGTGATGTACCTAAAACCCTTCAAGTTCTTCATGTTGGCAACAATCTCCTCACTGGAGAAATTCCTGATTGTTGGTTACACTGGCAAAACTTGACATCTTTGAATTTAGAAGACAACAATTTGACGGGAAAAATTCCAAGCTCTATTGGAGACTTACTTTCCCTTCGATCATTGCACTTGCGCAATAATAACTTATCTGGAGAATTACCCGTCTCCCTACAAAATTGTGAGCAGTTGTTACTTTTGGACCTTGGTGGAAACAAGTTTGTTGGAAGCATTCCAATATGGTTTGGCCAAAGCTTAGTAGTTCTTAGTCTTCGTTCAAATAAGTTCCATGGCGCCATTCCTGATGAACTCTGTAGTCTCATGAATCTCCAAATCTTGGACCTTGGGTATAACAATCTCTCGGGAATGATACCAAGATGTTTCCAAAATTTGTCATCCATGGCCATTACCTTTCCAAGAAGTACCAGTTTTGAAGTTTTCAGTGAGTATGATGCTGGGTATGGTGTTGCGATAGCTGGTATGGTTTATTATGACGAGACCACCTACATAGAGAGTGCAGTTTTTGTGACCAAAGGCAAAGAGGTGAAATATAACACAATGCTTGGTTTGGTAGCTAGTTTGGACCTTTCAAGCAACATGTTATCTGGAGAAATCCCTGAAGAGCTGACCAGCCTCATTCGCTTACAAACGTTGAATTTATCGGATAATCTTCTAACCGGAAGGATACCTTCCAAAATCGGTGATATGGCAATGTTAGAGTCACTTGATTTGTCCGTGAACCAACTTTCTGGAGAAATTTCTCCAAGCATCTCGAATTTGACATTTCTTAATTATCTGAATTTGTCCTATAACAATCTGATAGGGCAAATTCCAAAAAGCACTCAGCTTCAGAGCTTTGATCTGTCCACTTATGCTGGCAATAAACTTTGTGGACCTCCATTAGAAGAGCGTTGCATTACAAATGAGGCCATGCCACTGGTAGTTGATGAGAAACAAGGAGAAGGTCATTTACTTGAAGACGGTGGGTTCTATCTGAGCTTGGGGCTTGGATTTGCATTCGGGTTTTGGATTGTTCTTGGTTCATTGTTGTCTAATGTGCCATGGAGCAATGCATTTTCTCGGTTCCAAAATCGCATTGTGAAGAAGCTTTATGCTGCAATCGTCAAACGTTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

953

Amino Acids

105.44

Weight (kDa)

5.83

Isoelectric Point (pI)

28.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 72 5.4e-12 Leucine rich repeat N-terminal domain
LRR_8 PF13855 110 - 170 9.2e-08 Leucine rich repeat
LRR_8 PF13855 135 - 191 1.6e-06 Leucine rich repeat
LRR_14 PF23598 174 - 316 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 210 - 267 2.4e-08 Leucine rich repeat
LRR_8 PF13855 565 - 624 4.2e-07 Leucine rich repeat
LRR_8 PF13855 589 - 648 6.2e-06 Leucine rich repeat
LRR_8 PF13855 659 - 707 3.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1859
Acc65I GGTACC 1 cut(s) 1403
AccB1I GGYRCC 2 cut(s) 1403, 2015
AccB7I CCANNNNNTGG 1 cut(s) 2059
AccI GTMKAC 1 cut(s) 478
AccII CGCG 1 cut(s) 1556
AclI AACGTT 2 cut(s) 2372, 2851
AcoI YGGCCR 3 cut(s) 1514, 1969, 2124
AcuI CTGAAG 3 cut(s) 1212, 2361, 2555
AcyI GRCGYC 2 cut(s) 1318, 2016
AfaI GTAC 6 cut(s) 716, 755, 1157, 1405, 1686, 2146
AfiI CCNNNNNNNGG 3 cut(s) 1106, 1273, 2059
AflII CTTAAG 2 cut(s) 346, 1349
AflIII ACRYGT 2 cut(s) 1380, 2319
AgeI ACCGGT 1 cut(s) 200
AhlI ACTAGT 1 cut(s) 28
AjuI GAANNNNNNNTTGG 6 cut(s) 272, 304, 1093, 1125, 1486, 1518
Alw26I GTCTC 7 cut(s) 103, 984, 1192, 1821, 1894, 2045, 2213
Ama87I CYCGRG 1 cut(s) 2083
AoxI GGCC 4 cut(s) 1514, 1969, 2124, 2649
ApeKI GCWGC 2 cut(s) 651, 2837
AsiGI ACCGGT 1 cut(s) 200
Asp700I GAANNNNTTC 1 cut(s) 469
Asp718I GGTACC 1 cut(s) 1403
AspLEI GCGC 2 cut(s) 1860, 2018
AspS9I GGNCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
AsuHPI GGTGA 5 cut(s) 188, 287, 818, 2278, 2435
AsuII TTCGAA 2 cut(s) 863, 1019
AvaI CYCGRG 1 cut(s) 2083
AvaII GGWCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
BalI TGGCCA 3 cut(s) 1516, 1971, 2126
BanI GGYRCC 2 cut(s) 1403, 2015
BarI GAAGNNNNNNTAC 2 cut(s) 2676, 2708
BbsI GAAGAC 4 cut(s) 1596, 1794, 1985, 2706
BbvI GCAGC 2 cut(s) 638, 2824
BccI CCATC 3 cut(s) 505, 774, 1336
BcgI CGANNNNNNTGC 2 cut(s) 1156, 1190
BciVI GTATCC 1 cut(s) 2400
BcoDI GTCTC 7 cut(s) 103, 984, 1192, 1821, 1894, 2045, 2213
BcuI ACTAGT 1 cut(s) 28
BfaI CTAG 5 cut(s) 29, 381, 389, 1055, 2298
BfmI CTRYAG 2 cut(s) 211, 2035
BfoI RGCGCY 1 cut(s) 2019
BfrI CTTAAG 2 cut(s) 346, 1349
BfuI GTATCC 1 cut(s) 2400
BglI GCCNNNNNGGC 1 cut(s) 1345
BglII AGATCT 4 cut(s) 136, 1012, 1459, 1624
BisI GCNGC 2 cut(s) 652, 2838
BlsI GCNGC 2 cut(s) 653, 2839
Bme18I GGWCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
BmeT110I CYCGRG 1 cut(s) 2083
BmgT120I GGNCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
BmiI GGNNCC 8 cut(s) 445, 1111, 1278, 1326, 1405, 1491, 2017, 2807
BmrI ACTGGG 1 cut(s) 1282
BmsI GCATC 2 cut(s) 2164, 2499
BmuI ACTGGG 1 cut(s) 1282
BpiI GAAGAC 4 cut(s) 1596, 1794, 1985, 2706
BpmI CTGGAG 4 cut(s) 1752, 1896, 2349, 2493
Bpu14I TTCGAA 2 cut(s) 863, 1019
BpuEI CTTGAG 1 cut(s) 791
BsaHI GRCGYC 2 cut(s) 1318, 2016
BsaI GGTCTC 1 cut(s) 2213
BsaJI CCNNGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
BsaWI WCCGGW 2 cut(s) 200, 2399
Bsc4I CCNNNNNNNGG 3 cut(s) 1106, 1273, 2059
Bse118I RCCGGY 1 cut(s) 200
Bse1I ACTGG 9 cut(s) 200, 277, 679, 1118, 1277, 1735, 1763, 2148, 2664
Bse3DI GCAATG 6 cut(s) 45, 799, 1589, 1847, 2439, 2797
BseDI CCNNGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
BseGI GGATG 1 cut(s) 2117
BseLI CCNNNNNNNGG 3 cut(s) 1106, 1273, 2059
BseMI GCAATG 6 cut(s) 45, 799, 1589, 1847, 2439, 2797
BseMII CTCAG 3 cut(s) 346, 2579, 2708
BseNI ACTGG 9 cut(s) 200, 277, 679, 1118, 1277, 1735, 1763, 2148, 2664
BseRI GAGGAG 2 cut(s) 1163, 1715
BseXI GCAGC 2 cut(s) 638, 2824
BseYI CCCAGC 1 cut(s) 2177
BsgI GTGCAG 1 cut(s) 2259
Bsh1236I CGCG 1 cut(s) 1556
BshFI GGCC 4 cut(s) 1516, 1971, 2126, 2651
BshNI GGYRCC 2 cut(s) 1403, 2015
BshTI ACCGGT 1 cut(s) 200
BsiHKCI CYCGRG 1 cut(s) 2083
BsiSI CCGG 2 cut(s) 201, 2400
BslFI GGGAC 1 cut(s) 760
BslI CCNNNNNNNGG 3 cut(s) 1106, 1273, 2059
BsmAI GTCTC 7 cut(s) 103, 984, 1192, 1821, 1894, 2045, 2213
BsmBI CGTCTC 1 cut(s) 1894
BsmFI GGGAC 1 cut(s) 760
BsmI GAATGC 2 cut(s) 1953, 2738
BsnI GGCC 4 cut(s) 1516, 1971, 2126, 2651
Bso31I GGTCTC 1 cut(s) 2213
BsoBI CYCGRG 1 cut(s) 2083
Bsp119I TTCGAA 2 cut(s) 863, 1019
Bsp1407I TGTACA 1 cut(s) 1155
Bsp19I CCATGG 3 cut(s) 2011, 2121, 2783
Bsp68I TCGCGA 1 cut(s) 1556
BspANI GGCC 4 cut(s) 1516, 1971, 2126, 2651
BspCNI CTCAG 3 cut(s) 345, 2578, 2709
BspFNI CGCG 1 cut(s) 1556
BspHI TCATGA 2 cut(s) 12, 2043
BspLI GGNNCC 8 cut(s) 445, 1111, 1278, 1326, 1405, 1491, 2017, 2807
BspMAI CTGCAG 1 cut(s) 215
BspQI GCTCTTC 2 cut(s) 2337, 2622
BspT104I TTCGAA 2 cut(s) 863, 1019
BspT107I GGYRCC 2 cut(s) 1403, 2015
BspTI CTTAAG 2 cut(s) 346, 1349
BspTNI GGTCTC 1 cut(s) 2213
BsrDI GCAATG 6 cut(s) 45, 799, 1589, 1847, 2439, 2797
BsrFI RCCGGY 1 cut(s) 200
BsrGI TGTACA 1 cut(s) 1155
BsrI ACTGG 9 cut(s) 200, 277, 679, 1118, 1277, 1735, 1763, 2148, 2664
BssAI RCCGGY 1 cut(s) 200
BssECI CCNNGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
BssNI GRCGYC 2 cut(s) 1318, 2016
BssT1I CCWWGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
Bst4CI ACNGT 3 cut(s) 61, 758, 2705
Bst6I CTCTTC 2 cut(s) 2337, 2622
BstACI GRCGYC 2 cut(s) 1318, 2016
BstAFI CTTAAG 2 cut(s) 346, 1349
BstAUI TGTACA 1 cut(s) 1155
BstBI TTCGAA 2 cut(s) 863, 1019
BstC8I GCNNGC 3 cut(s) 211, 1341, 2599
BstDEI CTNAG 6 cut(s) 332, 1144, 1978, 1988, 2565, 2717
BstDSI CCRYGG 3 cut(s) 2011, 2121, 2783
BstF5I GGATG 1 cut(s) 2117
BstFNI CGCG 1 cut(s) 1556
BstH2I RGCGCY 1 cut(s) 2019
BstHHI GCGC 2 cut(s) 1860, 2018
BstMAI GTCTC 7 cut(s) 103, 984, 1192, 1821, 1894, 2045, 2213
BstMWI GCNNNNNNNGC 3 cut(s) 189, 1345, 2361
BstNSI RCATGY 4 cut(s) 431, 1171, 1384, 2323
BstSFI CTRYAG 2 cut(s) 211, 2035
BstUI CGCG 1 cut(s) 1556
BstV1I GCAGC 2 cut(s) 638, 2824
BstV2I GAAGAC 4 cut(s) 1596, 1794, 1985, 2706
BstX2I RGATCY 4 cut(s) 136, 1012, 1459, 1624
BstXI CCANNNNNNTGG 4 cut(s) 251, 1583, 2471, 2659
BstYI RGATCY 4 cut(s) 136, 1012, 1459, 1624
BsuI GTATCC 1 cut(s) 2400
BsuRI GGCC 4 cut(s) 1516, 1971, 2126, 2651
BtgI CCRYGG 3 cut(s) 2011, 2121, 2783
BtsCI GGATG 1 cut(s) 2117
BtsI GCAGTG 1 cut(s) 1452
BtsIMutI CAGTG 6 cut(s) 1125, 1452, 1728, 1756, 2170, 2657
BtuMI TCGCGA 1 cut(s) 1556
Cac8I GCNNGC 3 cut(s) 211, 1341, 2599
CciI TCATGA 2 cut(s) 12, 2043
CfoI GCGC 2 cut(s) 1860, 2018
Cfr10I RCCGGY 1 cut(s) 200
Cfr13I GGNCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
CseI GACGC 2 cut(s) 39, 1307
Csp6I GTAC 6 cut(s) 715, 754, 1156, 1404, 1685, 2145
CspAI ACCGGT 1 cut(s) 200
CviQI GTAC 6 cut(s) 715, 754, 1156, 1404, 1685, 2145
DdeI CTNAG 6 cut(s) 332, 1144, 1978, 1988, 2565, 2717
DinI GGCGCC 1 cut(s) 2017
DraI TTTAAA 2 cut(s) 153, 324
EaeI YGGCCR 3 cut(s) 1514, 1969, 2124
Eam1104I CTCTTC 2 cut(s) 2337, 2622
EarI CTCTTC 2 cut(s) 2337, 2622
Eco130I CCWWGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
Eco31I GGTCTC 1 cut(s) 2213
Eco32I GATATC 1 cut(s) 413
Eco47I GGWCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
Eco57I CTGAAG 3 cut(s) 1212, 2361, 2555
Eco88I CYCGRG 1 cut(s) 2083
EcoRV GATATC 1 cut(s) 413
EcoT14I CCWWGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
EcoT22I ATGCAT 2 cut(s) 47, 2797
EgeI GGCGCC 1 cut(s) 2017
EheI GGCGCC 1 cut(s) 2017
ErhI CCWWGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
Esp3I CGTCTC 1 cut(s) 1894
FalI AAGNNNNNCTT 2 cut(s) 2395, 2427
FaqI GGGAC 1 cut(s) 760
FblI GTMKAC 1 cut(s) 478
Fnu4HI GCNGC 2 cut(s) 652, 2838
FokI GGATG 1 cut(s) 2104
Fsp4HI GCNGC 2 cut(s) 652, 2838
FspBI CTAG 5 cut(s) 29, 381, 389, 1055, 2298
FspI TGCGCA 1 cut(s) 1859
GlaI GCGC 2 cut(s) 1859, 2017
GluI GCNGC 2 cut(s) 652, 2838
GsaI CCCAGC 1 cut(s) 2181
GsuI CTGGAG 4 cut(s) 1752, 1896, 2349, 2493
HaeII RGCGCY 1 cut(s) 2019
HaeIII GGCC 4 cut(s) 1516, 1971, 2126, 2651
HapII CCGG 2 cut(s) 201, 2400
HgaI GACGC 2 cut(s) 39, 1307
HhaI GCGC 2 cut(s) 1860, 2018
Hin1I GRCGYC 2 cut(s) 1318, 2016
Hin6I GCGC 2 cut(s) 1858, 2016
HinP1I GCGC 2 cut(s) 1858, 2016
HincII GTYRAC 2 cut(s) 915, 1302
HindII GTYRAC 2 cut(s) 915, 1302
HindIII AAGCTT 2 cut(s) 1975, 2828
HpaII CCGG 2 cut(s) 201, 2400
HphI GGTGA 5 cut(s) 188, 287, 818, 2278, 2435
Hpy166II GTNNAC 7 cut(s) 479, 685, 915, 1302, 2461, 2589, 2615
Hpy8I GTNNAC 7 cut(s) 479, 685, 915, 1302, 2461, 2589, 2615
HpyCH4III ACNGT 3 cut(s) 61, 758, 2705
HpyCH4IV ACGT 3 cut(s) 481, 2372, 2851
HpyF10VI GCNNNNNNNGC 3 cut(s) 189, 1345, 2361
HpyF3I CTNAG 6 cut(s) 332, 1144, 1978, 1988, 2565, 2717
HpySE526I ACGT 3 cut(s) 481, 2372, 2851
Hsp92I GRCGYC 2 cut(s) 1318, 2016
HspAI GCGC 2 cut(s) 1858, 2016
KasI GGCGCC 1 cut(s) 2015
KpnI GGTACC 1 cut(s) 1407
LguI GCTCTTC 2 cut(s) 2337, 2622
LmnI GCTCC 1 cut(s) 2787
Lsp1109I GCAGC 2 cut(s) 638, 2824
LweI GCATC 2 cut(s) 2164, 2499
MaeI CTAG 5 cut(s) 29, 381, 389, 1055, 2298
MaeII ACGT 3 cut(s) 481, 2372, 2851
MaeIII GTNAC 8 cut(s) 268, 600, 636, 1447, 1752, 1914, 2248, 2442
MboII GAAGA 9 cut(s) 1596, 1697, 1799, 1985, 2354, 2384, 2639, 2711, 2836
MflI RGATCY 4 cut(s) 136, 1012, 1459, 1624
MlsI TGGCCA 3 cut(s) 1516, 1971, 2126
MluNI TGGCCA 3 cut(s) 1516, 1971, 2126
Mly113I GGCGCC 1 cut(s) 2016
MlyI GAGTC 5 cut(s) 18, 782, 1246, 1363, 2450
MmeI TCCRAC 2 cut(s) 1436, 1927
Mox20I TGGCCA 3 cut(s) 1516, 1971, 2126
Mph1103I ATGCAT 2 cut(s) 47, 2797
MroXI GAANNNNTTC 1 cut(s) 469
MscI TGGCCA 3 cut(s) 1516, 1971, 2126
MslI CAYNNNNRTG 3 cut(s) 234, 645, 1118
Msp20I TGGCCA 3 cut(s) 1516, 1971, 2126
MspCI CTTAAG 2 cut(s) 346, 1349
MspI CCGG 2 cut(s) 201, 2400
Mva1269I GAATGC 2 cut(s) 1953, 2738
MvnI CGCG 1 cut(s) 1556
MwoI GCNNNNNNNGC 3 cut(s) 189, 1345, 2361
NarI GGCGCC 1 cut(s) 2016
NcoI CCATGG 3 cut(s) 2011, 2121, 2783
NlaIV GGNNCC 8 cut(s) 445, 1111, 1278, 1326, 1405, 1491, 2017, 2807
NmuCI GTSAC 4 cut(s) 268, 1447, 2248, 2442
NruI TCGCGA 1 cut(s) 1556
NsbI TGCGCA 1 cut(s) 1859
NsiI ATGCAT 2 cut(s) 47, 2797
NspI RCATGY 4 cut(s) 431, 1171, 1384, 2323
NspV TTCGAA 2 cut(s) 863, 1019
PagI TCATGA 2 cut(s) 12, 2043
PciI ACATGT 2 cut(s) 1380, 2319
PciSI GCTCTTC 2 cut(s) 2337, 2622
PctI GAATGC 2 cut(s) 1953, 2738
PdmI GAANNNNTTC 1 cut(s) 469
PfeI GAWTC 5 cut(s) 146, 520, 865, 1558, 2047
PflMI CCANNNNNTGG 1 cut(s) 2059
PinAI ACCGGT 1 cut(s) 200
PkrI GCNGC 2 cut(s) 653, 2839
PleI GAGTC 5 cut(s) 17, 781, 1246, 1362, 2449
PluTI GGCGCC 1 cut(s) 2019
PpsI GAGTC 5 cut(s) 17, 781, 1246, 1362, 2449
PscI ACATGT 2 cut(s) 1380, 2319
Psp1406I AACGTT 2 cut(s) 2372, 2851
PspFI CCCAGC 1 cut(s) 2177
PspN4I GGNNCC 8 cut(s) 445, 1111, 1278, 1326, 1405, 1491, 2017, 2807
PspPI GGNCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
PstI CTGCAG 1 cut(s) 215
PsuI RGATCY 4 cut(s) 136, 1012, 1459, 1624
RruI TCGCGA 1 cut(s) 1556
RsaI GTAC 6 cut(s) 716, 755, 1157, 1405, 1686, 2146
RsaNI GTAC 6 cut(s) 715, 754, 1156, 1404, 1685, 2145
RseI CAYNNNNRTG 3 cut(s) 234, 645, 1118
SapI GCTCTTC 2 cut(s) 2337, 2622
SatI GCNGC 2 cut(s) 652, 2838
Sau96I GGNCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
SchI GAGTC 5 cut(s) 18, 782, 1246, 1363, 2450
SfaNI GCATC 2 cut(s) 2164, 2499
SfcI CTRYAG 2 cut(s) 211, 2035
SfoI GGCGCC 1 cut(s) 2017
SfuI TTCGAA 2 cut(s) 863, 1019
SinI GGWCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
SmiMI CAYNNNNRTG 3 cut(s) 234, 645, 1118
SmlI CTYRAG 3 cut(s) 346, 770, 1349
SmoI CTYRAG 3 cut(s) 346, 770, 1349
SpeI ACTAGT 1 cut(s) 28
SspDI GGCGCC 1 cut(s) 2015
SspMI CTAG 5 cut(s) 29, 381, 389, 1055, 2298
StyI CCWWGG 7 cut(s) 823, 1125, 1927, 2011, 2065, 2121, 2783
TaaI ACNGT 3 cut(s) 61, 758, 2705
TaiI ACGT 3 cut(s) 484, 2375, 2854
TaqI TCGA 8 cut(s) 516, 633, 780, 863, 1019, 1176, 1843, 2495
TatI WGTACW 2 cut(s) 714, 1155
TfiI GAWTC 5 cut(s) 146, 520, 865, 1558, 2047
TscAI CASTG 6 cut(s) 1125, 1452, 1735, 1763, 2170, 2664
TseFI GTSAC 4 cut(s) 268, 1447, 2248, 2442
TseI GCWGC 2 cut(s) 651, 2837
Tsp45I GTSAC 4 cut(s) 268, 1447, 2248, 2442
TspDTI ATGAA 8 cut(s) 252, 1187, 1578, 1626, 1697, 2043, 2060, 2754
TspGWI ACGGA 2 cut(s) 456, 2446
TspRI CASTG 6 cut(s) 1125, 1452, 1735, 1763, 2170, 2664
Van91I CCANNNNNTGG 1 cut(s) 2059
Vha464I CTTAAG 2 cut(s) 346, 1349
VpaK11BI GGWCC 7 cut(s) 198, 490, 1324, 1924, 2062, 2305, 2615
XceI RCATGY 4 cut(s) 431, 1171, 1384, 2323
XcmI CCANNNNNNNNNTGG 1 cut(s) 1419
XmiI GTMKAC 1 cut(s) 478
XmnI GAANNNNTTC 1 cut(s) 469
XspI CTAG 5 cut(s) 29, 381, 389, 1055, 2298
Zsp2I ATGCAT 2 cut(s) 47, 2797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.