MD01G1174800.v1.1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
27608117 .. 27611170
3054 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1174800.v1.1.491

Sequence Viewer

Length: 3054 bp
ATGGAGAGAACCATGAGAGTTGTTTTACTACTAATCAGGTTTCTAGCCATTGCAACCATTACATTCAGTATTGGTTTATGCAATGGAAATCCCGGTTGGCCTCTACTTTGCAAAGAAAGCGAAAGGCAAGCACTTCTGATGTTCAAGCAAGATCTCAAGGACCCTGCCAATCGGCTTGCATCGTGGGTTTCAGAAGAAGATTCAGACTGTTGCAGTTGGACAGGTGTTGTCTGTGATCACATAACCGGCCACGTCCACGAGCTGCACCTTAATAGTTCTTATCACTCTTTTTTGGATGTCAAATCTTCGTTTGGTGGTATGATAAATCCTTCTTTGCTCGGTTTAAAGCATCTCAACTTCTTGGACTTGAGTTACAATCATTTCAATGGAACACAAATTCCTAGTTTCTTTGGTTCTATGACAAGTTTAACACACCTTAACCTTGCATACTCAGAGTTTTATGGAATAGTTCCTCATAAATTGGGAAATCTCTCTAGTCTACGATATCTCAATCTCAGTAGTTACTATAATCTAAAGGTAGAGAACCTTCAGTGGATTTCTGGTCTTTCTCTGCTGAAACACTTGGACTTGAGTTCTGTAAATCTTAGCAAAGCATCCGACTGGTTGCAAGTTACAAACATGCTCCCTTCTTTGGTAGAGTTAATTATGTCCAGTTGTCAACTTGATCAAATTCCCCACCTACCCACCGCAAATTTTACTTCCCTGGTCATTCTTGATCTTTCTTTCAACTTTTTTAATTCTTTGATGCCGAGGTGGATTTTCAGTATTAAAAATCTAGATTCTCTTCGTCTCACTGATTGTGATTTCCAAGGTCCAATTCCTAGCATTTCACAGAATATCACATCTTTGAGGGAAATTGATTTGTCATTCAATTCTATTAGTCTTGATCCGATTCCAAGCAGTATTCAGAATATGACTGGTCTTAAAATTCTTGATCTCAGTCAGAACGACTTCAATTCTACCATACCTGAATGGTTGTATAGCTTGAACAATCTCGAGTCCTTATTTCTTTCTTTCAATGCCTTACGTGGTGAAATATCGAGTTCCATTGGAAACATGACATCCCTTGTCAATCTAGACTTAAATTATAATCTGTTGGAAGGGAAAATCCCAAATTCTTTGGGACATCTTTGTAAGTTGAAAGTTCTTGATCTGTCAGAGAACCATTTCACGATTCAAAGACCATCTGAAATCTTTGAAATTTTGTCCAGATGTGGTCCAGATAGAATAAAATCATTGTCATTGAGGAATACTAATATATCAGGTCCCATTCCAATGTCCCTAGGAAATCTGTCAAGCTTAGAAAAATTGGACATATCTGGAAATCAGTTTAATGGAACTTTCACAGAAGTTATTTGTCAACTCAAAATGCTAACGGATTTGGATATATCTTATAATTCGTTCGAAGGTGCAGTGTCAGAAGTTTCTTTTAGCAACCTTTCAAAGTTGAAGCATTTCATTGCAAATGGAAACTCATTTACTCTGAAAACTAGTCGAGATTGGCTTCCTCCTTTTCAACTTGAAATTTTGCAATTGGATTCATGGCATCTGGGATCTGAATGGCCAATGTGGTTGCGGACACAAACACAATTAAAAGAACTAAGCTTGTCTGGTACAGGAATTTCAGGTACCATTCCAACTTGGTTTTGGAACTTAACTTCCCAAGTAGACTATCTGAATCTCTCTCACAATCAGTTGTATGGGCAGATTCAAAATATATTTAGTGCTGAAGGTTCAGCGGTTGATCTTAGTTCTAACCAATTCACTGGTGCATTGCCTATTGTTCCCACCTCAAAATTAAATTTGCTAGATCTTTCCAATTCATCATTTTCTGGATCTGTTTTCCACTTCTTCTGTGATAGGCCGGATCCGGATAAACCAATGTATTATTTTTTTGTTCTTCATCTCGGGAACAATCTTCTCACTGGAAAAGTACCCGACTGTTGGATGAGTTGGCAAAGCTTGGTAGTCCTAAATTTAGAAAACAACCACCTAACTGGGAATGTCCCAATGTCCGTGGGATCCTTGCAAAGACTGAGTTCGCTGCACTTGCGCAATAATCACATGTACGGAGAATTGCCACATTCCCTACAGAACTGTACCGAGTTGTCGATTGTTGACCTTAGTGGAAATGAGTTTGTTGGAAGCATACCAATATGGATTGGGAAAAGCCTTTCAGGGTTGCAGATTCTGAACCTTCGTTCGAATGAGTTTAAAGGAGACATTCCTCATGAAGTTTGTTATTTGAAAAGGCTCCAGATATTGGACCTTGCACGTAACAAACTCTCAGGAACGATACCAAGATGCTTCCACAATTTGAGCACCATGGCTGATTTGTCAGAATCATTTGGGTCAATATCGTTTGGGTTTGGGAGTTCTGTAGTGGAATTTTCATTTGTAGAGAATGCAATCTTGGTAACGAAAGGGAGAGAAGTAGAATATAGCAAGATTCTGGGATTCGTAAAAAGCATGGACCTTTCATGCAACTTTTTGTCTGGAGAGATTCCTGAAGAACTTACCAGCCTCATGGAATTGCAGTCGCTCAATTTATCGTATAATAGATTCACCGGAAGAATTCCTTCAAAGATTGGTAATATGGCAAAGTTAGAATCTCTCGATTTTTCCATGAACCAACTCCATGGTGGAATTCCTCCAAGCATGACGACTTTGACATTTCTGAGTCACTTGAACTTATCCAACAACAAATTGACAGGACGAATTCCGGAAAGCACTCAGCTGCAGAGCCTTAATCAGTCTAGCTTCGTCGGCAATGAACTCTGCGGACCTCCACTCAACAACAATTGCAGCGCGAATGGAGTAATACCACCACCAACAGTCGAGCAAGATGGAGGGGGAGGATACCATATACTCGAAGACGAGTGGTTCTACGTGAGCTTGGGAGTTGGATTCTTTACGGGGTTTTGGATTGTGCTTGGTTCTTTGCTGGTAAACATGCCATGGAGCATTTTTCTTTCGGGATTGCTGAATAGGATAGTTCTTAAACTTTATCATGTAATTGTTGAATATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1018

Amino Acids

113.57

Weight (kDa)

5.55

Isoelectric Point (pI)

33.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 40 - 79 3.2e-14 Leucine rich repeat N-terminal domain
LRR_14 PF23598 114 - 271 1.3e-07 Leucine-rich repeat region
LRR_8 PF13855 117 - 174 3.7e-06 Leucine rich repeat
LRR_14 PF23598 286 - 424 3.3e-09 Leucine-rich repeat region
LRR_8 PF13855 289 - 349 1.4e-07 Leucine rich repeat
LRR_14 PF23598 376 - 543 3.1e-10 Leucine-rich repeat region
LRR_8 PF13855 709 - 769 1.7e-06 Leucine rich repeat
LRR_14 PF23598 831 - 926 1.8e-06 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1110, 1416
Acc16I TGCGCA 1 cut(s) 2075
Acc65I GGTACC 1 cut(s) 1649
AccB1I GGYRCC 1 cut(s) 1649
AccB7I CCANNNNNTGG 1 cut(s) 2284
AccI GTMKAC 2 cut(s) 499, 1689
AccII CGCG 1 cut(s) 2831
AccIII TCCGGA 2 cut(s) 1891, 2743
AciI CCGC 4 cut(s) 708, 1597, 1760, 2802
AclWI GGATC 7 cut(s) 902, 1582, 1864, 1883, 1896, 2037, 2050
AcoI YGGCCR 2 cut(s) 247, 1583
AcuI CTGAAG 3 cut(s) 533, 1770, 2550
AfaI GTAC 5 cut(s) 1636, 1651, 1956, 2090, 2122
AfiI CCNNNNNNNGG 3 cut(s) 652, 1965, 2284
AflIII ACRYGT 1 cut(s) 2085
AhlI ACTAGT 1 cut(s) 1511
AjiI CACGTC 1 cut(s) 253
AjnI CCWGG 1 cut(s) 723
AjuI GAANNNNNNNTTGG 6 cut(s) 79, 111, 822, 854, 2417, 2449
AloI GAACNNNNNNTCC 4 cut(s) 382, 414, 1664, 1696
AluBI AGCT 8 cut(s) 262, 1005, 1320, 1626, 1983, 2758, 2781, 2916
AluI AGCT 8 cut(s) 262, 1005, 1320, 1626, 1983, 2758, 2781, 2916
Alw21I GWGCWC 1 cut(s) 2345
Alw26I GTCTC 2 cut(s) 815, 2235
AlwI GGATC 7 cut(s) 902, 1582, 1864, 1883, 1896, 2037, 2050
AlwNI CAGNNNCTG 1 cut(s) 2212
Ama87I CYCGRG 2 cut(s) 1016, 1928
Aor13HI TCCGGA 2 cut(s) 1891, 2743
AoxI GGCC 4 cut(s) 98, 247, 1583, 1883
ApeKI GCWGC 4 cut(s) 262, 2065, 2758, 2826
Asp700I GAANNNNTTC 4 cut(s) 971, 1187, 1475, 2599
Asp718I GGTACC 1 cut(s) 1649
AspA2I CCTAGG 1 cut(s) 1303
AspLEI GCGC 2 cut(s) 2076, 2831
AspS9I GGNCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
AsuC2I CCSGG 1 cut(s) 93
AsuHPI GGTGA 2 cut(s) 1064, 2578
AsuII TTCGAA 2 cut(s) 1425, 2225
AvaI CYCGRG 2 cut(s) 1016, 1928
AvaII GGWCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
AvrII CCTAGG 1 cut(s) 1303
BalI TGGCCA 1 cut(s) 1585
BamHI GGATCC 2 cut(s) 1888, 2042
BanI GGYRCC 1 cut(s) 1649
BarI GAAGNNNNNNTAC 2 cut(s) 531, 563
BauI CACGAG 1 cut(s) 257
BbsI GAAGAC 1 cut(s) 2901
Bbv12I GWGCWC 1 cut(s) 2345
BbvI GCAGC 4 cut(s) 249, 2052, 2745, 2838
BccI CCATC 2 cut(s) 1213, 2861
BciT130I CCWGG 1 cut(s) 725
BciVI GTATCC 1 cut(s) 2873
BclI TGATCA 2 cut(s) 235, 685
BcnI CCSGG 1 cut(s) 93
BcoDI GTCTC 2 cut(s) 815, 2235
BcuI ACTAGT 1 cut(s) 1511
BfmI CTRYAG 3 cut(s) 2111, 2400, 2759
BfuI GTATCC 1 cut(s) 2873
BglII AGATCT 2 cut(s) 151, 1831
BisI GCNGC 4 cut(s) 263, 2066, 2759, 2827
BlnI CCTAGG 1 cut(s) 1303
BlsI GCNGC 4 cut(s) 264, 2067, 2760, 2828
Bme1390I CCNGG 2 cut(s) 93, 725
Bme18I GGWCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
BmeT110I CYCGRG 2 cut(s) 1016, 1928
BmgBI CACGTC 1 cut(s) 253
BmgT120I GGNCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
BmiI GGNNCC 6 cut(s) 162, 1288, 1651, 1890, 2044, 2276
BmrFI CCNGG 2 cut(s) 93, 725
BmrI ACTGGG 1 cut(s) 2028
BmsI GCATC 6 cut(s) 188, 358, 623, 756, 1576, 2315
BmuI ACTGGG 1 cut(s) 2028
BpiI GAAGAC 1 cut(s) 2901
BpmI CTGGAG 2 cut(s) 2261, 2538
Bpu14I TTCGAA 2 cut(s) 1425, 2225
BpuEI CTTGAG 3 cut(s) 140, 388, 610
BpuMI CCSGG 1 cut(s) 93
BsaAI YACGTR 3 cut(s) 1049, 2297, 2911
BsaJI CCNNGG 8 cut(s) 723, 770, 829, 1303, 2037, 2346, 2659, 2978
BsaWI WCCGGW 3 cut(s) 1891, 2588, 2743
Bsc4I CCNNNNNNNGG 3 cut(s) 652, 1965, 2284
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 6 cut(s) 626, 672, 943, 1792, 1951, 2023
Bse3DI GCAATG 5 cut(s) 48, 88, 1479, 1793, 2797
BseAI TCCGGA 2 cut(s) 1891, 2743
BseBI CCWGG 1 cut(s) 725
BseDI CCNNGG 8 cut(s) 723, 770, 829, 1303, 2037, 2346, 2659, 2978
BseGI GGATG 4 cut(s) 301, 614, 1082, 1974
BseLI CCNNNNNNNGG 3 cut(s) 652, 1965, 2284
BseMI GCAATG 5 cut(s) 48, 88, 1479, 1793, 2797
BseMII CTCAG 7 cut(s) 465, 529, 973, 2048, 2322, 2690, 2768
BseNI ACTGG 6 cut(s) 626, 672, 943, 1792, 1951, 2023
BseXI GCAGC 4 cut(s) 249, 2052, 2745, 2838
BsgI GTGCAG 3 cut(s) 248, 1452, 2051
Bsh1236I CGCG 1 cut(s) 2831
BshFI GGCC 4 cut(s) 100, 249, 1585, 1885
BshNI GGYRCC 1 cut(s) 1649
BsiHKAI GWGCWC 1 cut(s) 2345
BsiHKCI CYCGRG 2 cut(s) 1016, 1928
BsiSI CCGG 6 cut(s) 93, 246, 1886, 1892, 2589, 2744
BslFI GGGAC 4 cut(s) 1158, 1272, 1285, 2012
BslI CCNNNNNNNGG 3 cut(s) 652, 1965, 2284
BsmAI GTCTC 2 cut(s) 815, 2235
BsmBI CGTCTC 1 cut(s) 815
BsmFI GGGAC 4 cut(s) 1158, 1272, 1285, 2012
BsmI GAATGC 1 cut(s) 2431
BsnI GGCC 4 cut(s) 100, 249, 1585, 1885
BsoBI CYCGRG 2 cut(s) 1016, 1928
Bsp119I TTCGAA 2 cut(s) 1425, 2225
Bsp1286I GDGCHC 1 cut(s) 2345
Bsp13I TCCGGA 2 cut(s) 1891, 2743
Bsp19I CCATGG 3 cut(s) 2346, 2659, 2978
BspACI CCGC 4 cut(s) 708, 1597, 1760, 2802
BspANI GGCC 4 cut(s) 100, 249, 1585, 1885
BspCNI CTCAG 7 cut(s) 464, 528, 972, 2049, 2321, 2691, 2767
BspEI TCCGGA 2 cut(s) 1891, 2743
BspFNI CGCG 1 cut(s) 2831
BspHI TCATGA 1 cut(s) 2251
BspLI GGNNCC 6 cut(s) 162, 1288, 1651, 1890, 2044, 2276
BspMAI CTGCAG 1 cut(s) 2763
BspPI GGATC 7 cut(s) 902, 1582, 1864, 1883, 1896, 2037, 2050
BspT104I TTCGAA 2 cut(s) 1425, 2225
BspT107I GGYRCC 1 cut(s) 1649
BsrDI GCAATG 5 cut(s) 48, 88, 1479, 1793, 2797
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 6 cut(s) 626, 672, 943, 1792, 1951, 2023
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 8 cut(s) 723, 770, 829, 1303, 2037, 2346, 2659, 2978
BssSI CACGAG 1 cut(s) 257
BssT1I CCWWGG 5 cut(s) 829, 1303, 2346, 2659, 2978
Bst2BI CACGAG 1 cut(s) 257
Bst2UI CCWGG 1 cut(s) 725
Bst4CI ACNGT 4 cut(s) 209, 1964, 2120, 2857
Bst6I CTCTTC 1 cut(s) 810
BstBAI YACGTR 3 cut(s) 1049, 2297, 2911
BstBI TTCGAA 2 cut(s) 1425, 2225
BstC8I GCNNGC 2 cut(s) 129, 177
BstDSI CCRYGG 4 cut(s) 2037, 2346, 2659, 2978
BstF5I GGATG 4 cut(s) 301, 614, 1082, 1974
BstFNI CGCG 1 cut(s) 2831
BstHHI GCGC 2 cut(s) 2076, 2831
BstMAI GTCTC 2 cut(s) 815, 2235
BstMWI GCNNNNNNNGC 3 cut(s) 117, 2071, 2787
BstNI CCWGG 1 cut(s) 725
BstNSI RCATGY 3 cut(s) 643, 2089, 2977
BstSCI CCNGG 2 cut(s) 91, 723
BstSFI CTRYAG 3 cut(s) 2111, 2400, 2759
BstUI CGCG 1 cut(s) 2831
BstV1I GCAGC 4 cut(s) 249, 2052, 2745, 2838
BstV2I GAAGAC 1 cut(s) 2901
BstX2I RGATCY 6 cut(s) 151, 1574, 1831, 1856, 1888, 2042
BstXI CCANNNNNNTGG 4 cut(s) 1787, 2018, 2548, 2660
BstYI RGATCY 6 cut(s) 151, 1574, 1831, 1856, 1888, 2042
BsuI GTATCC 1 cut(s) 2873
BsuRI GGCC 4 cut(s) 100, 249, 1585, 1885
BtgI CCRYGG 4 cut(s) 2037, 2346, 2659, 2978
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 4 cut(s) 301, 614, 1082, 1974
BtsI GCAGTG 1 cut(s) 1440
BtsIMutI CAGTG 5 cut(s) 557, 813, 1440, 1785, 1944
Cac8I GCNNGC 2 cut(s) 129, 177
CaiI CAGNNNCTG 1 cut(s) 2212
CciI TCATGA 1 cut(s) 2251
CfoI GCGC 2 cut(s) 2076, 2831
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
Csp6I GTAC 5 cut(s) 1635, 1650, 1955, 2089, 2121
CspCI CAANNNNNGTGG 2 cut(s) 2019, 2054
CviQI GTAC 5 cut(s) 1635, 1650, 1955, 2089, 2121
DraI TTTAAA 2 cut(s) 345, 2236
EaeI YGGCCR 2 cut(s) 247, 1583
Eam1104I CTCTTC 1 cut(s) 810
EarI CTCTTC 1 cut(s) 810
Eco130I CCWWGG 5 cut(s) 829, 1303, 2346, 2659, 2978
Eco32I GATATC 1 cut(s) 506
Eco47I GGWCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
Eco57I CTGAAG 3 cut(s) 533, 1770, 2550
Eco88I CYCGRG 2 cut(s) 1016, 1928
EcoO109I RGGNCCY 2 cut(s) 160, 1286
EcoRI GAATTC 3 cut(s) 2595, 2667, 2739
EcoRII CCWGG 1 cut(s) 723
EcoRV GATATC 1 cut(s) 506
EcoT14I CCWWGG 5 cut(s) 829, 1303, 2346, 2659, 2978
ErhI CCWWGG 5 cut(s) 829, 1303, 2346, 2659, 2978
Esp3I CGTCTC 1 cut(s) 815
FalI AAGNNNNNCTT 2 cut(s) 2584, 2616
FaqI GGGAC 4 cut(s) 1158, 1272, 1285, 2012
FbaI TGATCA 2 cut(s) 235, 685
FblI GTMKAC 2 cut(s) 499, 1689
Fnu4HI GCNGC 4 cut(s) 263, 2066, 2759, 2827
FokI GGATG 4 cut(s) 308, 601, 1069, 1981
Fsp4HI GCNGC 4 cut(s) 263, 2066, 2759, 2827
FspI TGCGCA 1 cut(s) 2075
GlaI GCGC 2 cut(s) 2075, 2830
GluI GCNGC 4 cut(s) 263, 2066, 2759, 2827
GsuI CTGGAG 2 cut(s) 2261, 2538
HaeIII GGCC 4 cut(s) 100, 249, 1585, 1885
HapII CCGG 6 cut(s) 93, 246, 1886, 1892, 2589, 2744
HhaI GCGC 2 cut(s) 2076, 2831
Hin6I GCGC 2 cut(s) 2074, 2829
HinP1I GCGC 2 cut(s) 2074, 2829
HincII GTYRAC 3 cut(s) 680, 1382, 2140
HindII GTYRAC 3 cut(s) 680, 1382, 2140
HindIII AAGCTT 3 cut(s) 1318, 1624, 1981
HpaII CCGG 6 cut(s) 93, 246, 1886, 1892, 2589, 2744
HphI GGTGA 2 cut(s) 1064, 2578
Hpy166II GTNNAC 7 cut(s) 256, 500, 680, 1382, 1690, 2140, 2971
Hpy8I GTNNAC 7 cut(s) 256, 500, 680, 1382, 1690, 2140, 2971
Hpy99I CGWCG 1 cut(s) 2789
HpyAV CCTTC 8 cut(s) 339, 557, 657, 1115, 1421, 1745, 2228, 2610
HpyCH4III ACNGT 4 cut(s) 209, 1964, 2120, 2857
HpyCH4IV ACGT 4 cut(s) 252, 1048, 2296, 2910
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 2071, 2787
HpySE526I ACGT 4 cut(s) 252, 1048, 2296, 2910
HspAI GCGC 2 cut(s) 2074, 2829
Kpn2I TCCGGA 2 cut(s) 1891, 2743
KpnI GGTACC 1 cut(s) 1653
Ksp22I TGATCA 2 cut(s) 235, 685
LmnI GCTCC 3 cut(s) 648, 2280, 2982
Lsp1109I GCAGC 4 cut(s) 249, 2052, 2745, 2838
LweI GCATC 6 cut(s) 188, 358, 623, 756, 1576, 2315
MaeII ACGT 4 cut(s) 252, 1048, 2296, 2910
MaeIII GTNAC 6 cut(s) 371, 521, 631, 2297, 2437, 2702
MfeI CAATTG 2 cut(s) 1553, 2821
MflI RGATCY 6 cut(s) 151, 1574, 1831, 1856, 1888, 2042
MhlI GDGCHC 1 cut(s) 2345
MlsI TGGCCA 1 cut(s) 1585
MluNI TGGCCA 1 cut(s) 1585
MlyI GAGTC 2 cut(s) 1028, 2710
MmeI TCCRAC 8 cut(s) 197, 642, 1098, 1682, 1946, 2143, 2742, 2905
Mox20I TGGCCA 1 cut(s) 1585
MroI TCCGGA 2 cut(s) 1891, 2743
MroXI GAANNNNTTC 4 cut(s) 971, 1187, 1475, 2599
MscI TGGCCA 1 cut(s) 1585
MslI CAYNNNNRTG 2 cut(s) 384, 1295
Msp20I TGGCCA 1 cut(s) 1585
MspA1I CMGCKG 2 cut(s) 1760, 2758
MspI CCGG 6 cut(s) 93, 246, 1886, 1892, 2589, 2744
MspR9I CCNGG 2 cut(s) 93, 725
MunI CAATTG 2 cut(s) 1553, 2821
Mva1269I GAATGC 1 cut(s) 2431
MvaI CCWGG 1 cut(s) 725
MvnI CGCG 1 cut(s) 2831
MwoI GCNNNNNNNGC 3 cut(s) 117, 2071, 2787
NciI CCSGG 1 cut(s) 93
NcoI CCATGG 3 cut(s) 2346, 2659, 2978
NlaIV GGNNCC 6 cut(s) 162, 1288, 1651, 1890, 2044, 2276
NmeAIII GCCGAG 1 cut(s) 795
NmuCI GTSAC 1 cut(s) 2702
NsbI TGCGCA 1 cut(s) 2075
NspI RCATGY 3 cut(s) 643, 2089, 2977
NspV TTCGAA 2 cut(s) 1425, 2225
PaeR7I CTCGAG 1 cut(s) 1016
PagI TCATGA 1 cut(s) 2251
PciI ACATGT 1 cut(s) 2085
PctI GAATGC 1 cut(s) 2431
PdmI GAANNNNTTC 4 cut(s) 971, 1187, 1475, 2599
PflMI CCANNNNNTGG 1 cut(s) 2284
PkrI GCNGC 4 cut(s) 264, 2067, 2760, 2828
PleI GAGTC 2 cut(s) 1027, 2709
PpsI GAGTC 2 cut(s) 1027, 2709
Ppu21I YACGTR 3 cut(s) 1049, 2297, 2911
PpuMI RGGWCCY 2 cut(s) 160, 1286
PscI ACATGT 1 cut(s) 2085
PsiI TTATAA 2 cut(s) 1110, 1416
Psp5II RGGWCCY 2 cut(s) 160, 1286
Psp6I CCWGG 1 cut(s) 723
PspGI CCWGG 1 cut(s) 723
PspN4I GGNNCC 6 cut(s) 162, 1288, 1651, 1890, 2044, 2276
PspPI GGNCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
PspPPI RGGWCCY 2 cut(s) 160, 1286
PstI CTGCAG 1 cut(s) 2763
PstNI CAGNNNCTG 1 cut(s) 2212
PsuI RGATCY 6 cut(s) 151, 1574, 1831, 1856, 1888, 2042
PvuII CAGCTG 1 cut(s) 2758
RsaI GTAC 5 cut(s) 1636, 1651, 1956, 2090, 2122
RsaNI GTAC 5 cut(s) 1635, 1650, 1955, 2089, 2121
RseI CAYNNNNRTG 2 cut(s) 384, 1295
SatI GCNGC 4 cut(s) 263, 2066, 2759, 2827
Sau96I GGNCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
SchI GAGTC 2 cut(s) 1028, 2710
ScrFI CCNGG 2 cut(s) 93, 725
SduI GDGCHC 1 cut(s) 2345
SfaNI GCATC 6 cut(s) 188, 358, 623, 756, 1576, 2315
SfcI CTRYAG 3 cut(s) 2111, 2400, 2759
Sfr274I CTCGAG 1 cut(s) 1016
SfuI TTCGAA 2 cut(s) 1425, 2225
SinI GGWCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
SlaI CTCGAG 1 cut(s) 1016
SmiMI CAYNNNNRTG 2 cut(s) 384, 1295
SmlI CTYRAG 4 cut(s) 155, 367, 589, 1016
SmoI CTYRAG 4 cut(s) 155, 367, 589, 1016
SpeI ACTAGT 1 cut(s) 1511
SsiI CCGC 4 cut(s) 708, 1597, 1760, 2802
StyD4I CCNGG 2 cut(s) 91, 723
StyI CCWWGG 5 cut(s) 829, 1303, 2346, 2659, 2978
TaaI ACNGT 4 cut(s) 209, 1964, 2120, 2857
TaiI ACGT 4 cut(s) 255, 1051, 2299, 2913
TaqI TCGA 9 cut(s) 1017, 1061, 1425, 1516, 2132, 2225, 2637, 2859, 2892
TscAI CASTG 5 cut(s) 557, 820, 1440, 1792, 1951
TseFI GTSAC 1 cut(s) 2702
TseI GCWGC 4 cut(s) 262, 2065, 2758, 2826
Tsp45I GTSAC 1 cut(s) 2702
TspDTI ATGAA 9 cut(s) 1468, 1551, 1833, 1913, 2268, 2403, 2490, 2663, 2808
TspGWI ACGGA 3 cut(s) 1412, 2026, 2106
TspRI CASTG 5 cut(s) 557, 820, 1440, 1792, 1951
Van91I CCANNNNNTGG 1 cut(s) 2284
VpaK11BI GGWCC 7 cut(s) 160, 833, 1238, 1286, 2287, 2494, 2804
XbaI TCTAGA 2 cut(s) 796, 1096
XceI RCATGY 3 cut(s) 643, 2089, 2977
XcmI CCANNNNNNNNNTGG 2 cut(s) 1665, 2660
XhoI CTCGAG 1 cut(s) 1016
XmaJI CCTAGG 1 cut(s) 1303
XmiI GTMKAC 2 cut(s) 499, 1689
XmnI GAANNNNTTC 4 cut(s) 971, 1187, 1475, 2599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.