Rmu_sc0008079.1_g000015

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008079.1
Physical Location & Seq
Reverse (-)
82232 .. 87375
5144 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008079.1_g000015.1.cds

Sequence Viewer

Length: 3906 bp
atggagaagtccatgagaaccgtcttacttctctcgttattaaccattgcaacgattactactagtattggatcatgcaatggaaaactgaatgtgccttgtagagaaagcgaaaaacaagcgcttctcattttcaagcaagatcttaaagatccttcaaatcgtctttcatcatgggttgctgaagaagattccaactgctgcaattgggctggagttgtctgtcattactccgccggccacatccatgagctacatcttgataacccggtggattccaactcttcattcggtggtaagataaatccttccctgctcaatttaactcatctcacctacttgaacctaagtaacaataactttcaagggacaaagattcctggcttctttggttctcttgagagtttaactcatcttgacctctcacgagcaagcttcggaggaatggttccccatcaactgggaaatctttccagtctaagccatctctttcttggtggctacggcctgaaagttgagaaactggaatggatttctggtctgtctcgattggaacacctggacatgagtggtgttgatcttagcaaagcatctgatcattggctgccagtgatacagaagctcccctctttggtagaattacgtatgggcagttgtcaacttcttagcattccacttctacctatcgtcaattttacttcacttgcgatccttgatctttctgggaacgctttttattctttgattcccgggtggatatgcagtcttagaaatctagtttctcttcatctggtgggttgtggtttccaaggtccgattcccagaagtccacacaatatcacgtctctcagggaaatgaatctctcccggaattttcttaatcattcgatacctgagtggttgtttaaccacaaagacctcactcttttggacctgggacacaatgaccttgaagggccactgccagatggtatgatgaatatgactggtcttaaagttctttatctcaaaacaaaccttctcaattcaaccataccagagtggttgtatggtttaaaccatcttgagtccttaattctttctttcaataacttccacggtgaaatttcaagttccattggaaacttgacatccatcatcaacctaaagttcgagcagaatctgttggaaggaaaaatcccaaagtcactgggaaatctttgtaaattggtggttcttgatctttcatggagccgattcacgcttggaaggttatcagaattttttgaaactttgtctgtttgtggttcaaatagaatgaagtcattgtctttggaatcttgtgatctttctggtcggttaacagagcaggtaggaatctttacaaacttgagcgtccttgaactttctgataattcattatcaggtcccattccagtgtccctgggaaatctatcacgcttggaagaatttaacatccatagcaatcagttcaatggaactcttccagaaatcattggtcaactcaaaatgctaacgattttggatatctcccataattcattggaaggtgcagtctctgaagttcattttacttgtcttgcaagattgtcaagcttcgttggaaacggaaattcattgatgctcaatactagtcgaaattggattcctccttttcaacttcatctcttaagattagattcttggaatttggggcctgaatttcctatgtggattcagcaacaagtccagttgcagttacagggtctaagcttatctagtacaggactttcgggtcccattcccaattgggtttgggactcatctttactttttcttgatctctctcacaatcaattgcatggagagatcccaagtttagttgcttcccggttgtcaatgattgacttaagttctaaccagttcaacggttcattacctctcatttcttccaatttaagtgtgctagttctttccaattcatcattttctggatctgtcacccacttcttttgtgatgcaagaaatgggccaaaacaacttaaagtccttcatctagagaacaatcatctcgttggaagaattcctgattgttggatgcattggaaaagcctaaaagttgtgaatttagaatgcaacaatttgactgggaatattccaagctccatgggatacttgctagacctcgtatcactccacctgcacaataatcagctatctggggaattacctctatcactgcagaactgcattgaattgcaggttgttgaccttggtctaaataagttggagggaagcttatcaacctggatgggaaaaagccttccacacttggcggttcttaaccttcgttcaaataagcttcagggagacattccgtatgaactctgttatctcgcaagtctccaaatcttggacattgcaaataacaacctctcgggaacaataccaagatgcttcaacaatcttactgccatgagcaccttgtcagaatatcattatagtcatactttgttaatctcattgctaatagatttgattgttcttgaaccgtgggtgcccgtttttcctgtattatgggtcgaagagaatgcggccttggtgacaaaaaggagagaatggcagtacaaaacgattcgacttgtaaaaagcatggacatttccgccaacattatatctggggagattcctgaggagctgaccagcctctttggcctgcacacattgaacttatcaaacaatcttttgagcggaagaatcccttcaaagattggtaatttgggtcagttagaatctcttgatttgtcgaagaaccacctttttggtggaattcctgcaagcatgaccaaactgacatttttgagtagcttgaacttgtcatacaacaatttaacgggccggattccagaaggcaatcagcttcagacccttgatgaatccagctttgttggcaatgaactctgcggacctccactcatcaagatttgcggtgcaagcaaggtgacaccaccaacagttgagcaacagagaggatatgatttacttgatgacaagtggttcttcctgagcttgggcttgggattcgcggttgaaaccaccgctgcctaccttgaagctctcaatcccaggaacccagaaccggcggcgccacccccaaaatcggccggaatcaacctgaaccggccaccggaagtgttcaaaccggactcccaagaagaatccgaagatctcctgtgtggttcgccatcttcccatccacccttcactgccacctttttagcccagcagtcgagcccacgtgcagcaggccccaacggaccccacgtgcaccagccaagccgccacgccgccgtgttccctgccacgtcagcgtccatgcaggcgtccagtcagcctgccacgtcatcatccagactgccacgtcagcacctgcggtcaacctccggtcaacgaccagtcaacgccggtcaacacttttcctgcgacttttcggccatctacaataacttttccgaaaagaaaagaaaaacagagcaagtgttctccaagcttgttctttctccacaggtcattaatcgacgccaaacaaccttctgtggcttcgtctcagccttgcgtagctacctgcggcggtcttgggtcacggcacagccggaagcggcggcgaagaggccgggttcgtccagccccgatttgaattccaagcatggttgctcgagctatcgaccacgaaaccttctcaaattccatccacaggttcgcatcgacctcctgaagctcctagaagcaaccttggacggcagcacaggccgtagcagcagctgcaaggcaaccccacggaaccggaaattatcgatcaaatatctcgagctacaggacgtcgttttgcttgtttcttggactggtgaactcagagtgaggatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1301

Amino Acids

143.56

Weight (kDa)

6.91

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2187, 3417
AasI GACNNNNNNGTC 2 cut(s) 1773, 3399
AatII GACGTC 1 cut(s) 3861
Acc36I ACCTGC 5 cut(s) 1339, 2187, 2230, 3417, 3612
AccB1I GGYRCC 2 cut(s) 2536, 3124
AccB7I CCANNNNNTGG 2 cut(s) 460, 2392
AccBSI CCGCTC 1 cut(s) 2730
AccII CGCG 1 cut(s) 3065
AclWI GGATC 5 cut(s) 79, 146, 703, 1843, 1981
AcoI YGGCCR 4 cut(s) 238, 3141, 3161, 3471
AcuI CTGAAG 5 cut(s) 204, 1581, 2327, 2885, 3773
AcvI CACGTG 2 cut(s) 3278, 3304
AcyI GRCGYC 4 cut(s) 3125, 3362, 3559, 3858
AfaI GTAC 2 cut(s) 1762, 2606
AfeI AGCGCT 1 cut(s) 123
AfiI CCNNNNNNNGG 8 cut(s) 460, 631, 2392, 3049, 3118, 3139, 3166, 3733
AflII CTTAAG 2 cut(s) 1669, 1888
AhlI ACTAGT 2 cut(s) 62, 1631
AjiI CACGTC 4 cut(s) 843, 3345, 3381, 3401
AjnI CCWGG 6 cut(s) 379, 558, 933, 1422, 2285, 3104
AjuI GAANNNNNNNTTGG 6 cut(s) 272, 304, 801, 833, 2561, 2593
AloI GAACNNNNNNTCC 2 cut(s) 432, 464
Alw21I GWGCWC 2 cut(s) 2462, 3309
Alw26I GTCTC 6 cut(s) 549, 849, 1561, 2343, 2387, 3589
Alw44I GTGCAC 1 cut(s) 3305
AlwI GGATC 5 cut(s) 79, 146, 703, 1843, 1981
AlwNI CAGNNNCTG 4 cut(s) 1162, 1559, 3409, 3801
Ama87I CYCGRG 4 cut(s) 749, 2416, 3694, 3845
Aor51HI AGCGCT 1 cut(s) 123
ApaLI GTGCAC 1 cut(s) 3305
ApeKI GCWGC 8 cut(s) 201, 604, 3080, 3281, 3780, 3795, 3798, 3801
AseI ATTAAT 1 cut(s) 3552
Asp700I GAANNNNTTC 2 cut(s) 469, 2740
AspLEI GCGC 2 cut(s) 124, 3127
AsuC2I CCSGG 6 cut(s) 269, 750, 751, 868, 1870, 3654
AsuHPI GGTGA 6 cut(s) 325, 1112, 1972, 2593, 2992, 3896
AvaI CYCGRG 4 cut(s) 749, 2416, 3694, 3845
AvaII GGWCC 6 cut(s) 812, 931, 1406, 1775, 2945, 3296
AxyI CCTNAGG 1 cut(s) 2670
BaeGI GKGCMC 2 cut(s) 2541, 3309
BaeI ACNNNNGTAYC 2 cut(s) 881, 914
BanI GGYRCC 2 cut(s) 2536, 3124
BanII GRGCYC 1 cut(s) 3275
BauI CACGAG 1 cut(s) 426
BbrPI CACGTG 2 cut(s) 3278, 3304
Bbv12I GWGCWC 2 cut(s) 2462, 3309
BbvI GCAGC 8 cut(s) 188, 591, 3067, 3293, 3788, 3792, 3807, 3810
BceAI ACGGC 5 cut(s) 520, 3314, 3639, 3774, 3793
BcgI CGANNNNNNTGC 2 cut(s) 2552, 2586
BciT130I CCWGG 6 cut(s) 381, 560, 935, 1424, 2287, 3106
BciVI GTATCC 1 cut(s) 2144
BclI TGATCA 1 cut(s) 595
BcnI CCSGG 6 cut(s) 269, 750, 751, 868, 1870, 3654
BcoDI GTCTC 6 cut(s) 549, 849, 1561, 2343, 2387, 3589
BcuI ACTAGT 2 cut(s) 62, 1631
BfaI CTAG 8 cut(s) 63, 776, 1632, 1758, 1946, 2036, 2159, 3761
BfmI CTRYAG 2 cut(s) 2219, 3851
BfoI RGCGCY 2 cut(s) 125, 3128
BfrI CTTAAG 2 cut(s) 1669, 1888
BfuAI ACCTGC 5 cut(s) 1339, 2187, 2230, 3417, 3612
BfuI GTATCC 1 cut(s) 2144
BglI GCCNNNNNGGC 1 cut(s) 2691
BglII AGATCT 2 cut(s) 142, 3205
Bme18I GGWCC 6 cut(s) 812, 931, 1406, 1775, 2945, 3296
BmeT110I CYCGRG 4 cut(s) 749, 2416, 3694, 3845
BmgBI CACGTC 4 cut(s) 843, 3345, 3381, 3401
BmrI ACTGGG 3 cut(s) 470, 1199, 2136
BmsI GCATC 6 cut(s) 599, 1611, 1987, 2067, 2423, 3750
BmuI ACTGGG 3 cut(s) 470, 1199, 2136
BoxI GACNNNNGTC 1 cut(s) 2253
BplI GAGNNNNNCTC 2 cut(s) 394, 426
BpmI CTGGAG 1 cut(s) 234
Bpu10I CCTNAGC 1 cut(s) 3044
BpuEI CTTGAG 3 cut(s) 419, 1085, 1390
BpuMI CCSGG 6 cut(s) 269, 750, 751, 868, 1870, 3654
Bsa29I ATCGAT 1 cut(s) 3833
BsaAI YACGTR 3 cut(s) 644, 3278, 3304
BsaHI GRCGYC 4 cut(s) 3125, 3362, 3559, 3858
BsaWI WCCGGW 4 cut(s) 3166, 3181, 3422, 3822
BsaXI ACNNNNNCTCC 4 cut(s) 432, 462, 606, 636
Bsc4I CCNNNNNNNGG 8 cut(s) 460, 631, 2392, 3049, 3118, 3139, 3166, 3733
Bse118I RCCGGY 4 cut(s) 236, 3118, 3159, 3443
Bse21I CCTNAGG 1 cut(s) 2670
Bse3DI GCAATG 5 cut(s) 45, 85, 2397, 2501, 2938
BseBI CCWGG 6 cut(s) 381, 560, 935, 1424, 2287, 3106
BseCI ATCGAT 1 cut(s) 3833
BseGI GGATG 8 cut(s) 243, 1130, 1455, 2082, 2295, 3232, 3386, 3727
BseLI CCNNNNNNNGG 8 cut(s) 460, 631, 2392, 3049, 3118, 3139, 3166, 3733
BseMI GCAATG 5 cut(s) 45, 85, 2397, 2501, 2938
BseMII CTCAG 6 cut(s) 862, 885, 2661, 3035, 3600, 3904
BseRI GAGGAG 1 cut(s) 2687
BseSI GKGCMC 2 cut(s) 2541, 3309
BseX3I CGGCCG 1 cut(s) 3141
BseXI GCAGC 8 cut(s) 188, 591, 3067, 3293, 3788, 3792, 3807, 3810
BseYI CCCAGC 1 cut(s) 3261
BsgI GTGCAG 4 cut(s) 1572, 2165, 2681, 3300
Bsh1236I CGCG 1 cut(s) 3065
Bsh1285I CGRYCG 1 cut(s) 3144
BshNI GGYRCC 2 cut(s) 2536, 3124
BshVI ATCGAT 1 cut(s) 3833
BsiEI CGRYCG 1 cut(s) 3144
BsiHKAI GWGCWC 2 cut(s) 2462, 3309
BsiHKCI CYCGRG 4 cut(s) 749, 2416, 3694, 3845
BslFI GGGAC 6 cut(s) 382, 951, 1392, 1405, 1761, 1811
BslI CCNNNNNNNGG 8 cut(s) 460, 631, 2392, 3049, 3118, 3139, 3166, 3733
BsmAI GTCTC 6 cut(s) 549, 849, 1561, 2343, 2387, 3589
BsmBI CGTCTC 2 cut(s) 849, 3589
BsmFI GGGAC 6 cut(s) 382, 951, 1392, 1405, 1761, 1811
BsmI GAATGC 3 cut(s) 669, 2117, 2575
BsoBI CYCGRG 4 cut(s) 749, 2416, 3694, 3845
Bsp1286I GDGCHC 4 cut(s) 2462, 2541, 3275, 3309
Bsp19I CCATGG 1 cut(s) 2145
BspCNI CTCAG 6 cut(s) 861, 886, 2662, 3036, 3599, 3903
BspDI ATCGAT 1 cut(s) 3833
BspFNI CGCG 1 cut(s) 3065
BspMAI CTGCAG 1 cut(s) 2223
BspMI ACCTGC 5 cut(s) 1339, 2187, 2230, 3417, 3612
BspPI GGATC 5 cut(s) 79, 146, 703, 1843, 1981
BspT107I GGYRCC 2 cut(s) 2536, 3124
BspTI CTTAAG 2 cut(s) 1669, 1888
BsrBI CCGCTC 1 cut(s) 2730
BsrDI GCAATG 5 cut(s) 45, 85, 2397, 2501, 2938
BsrFI RCCGGY 4 cut(s) 236, 3118, 3159, 3443
BssAI RCCGGY 4 cut(s) 236, 3118, 3159, 3443
BssNI GRCGYC 4 cut(s) 3125, 3362, 3559, 3858
BssSI CACGAG 1 cut(s) 426
BssT1I CCWWGG 5 cut(s) 808, 2145, 2251, 2577, 3771
Bst2BI CACGAG 1 cut(s) 426
Bst2UI CCWGG 6 cut(s) 381, 560, 935, 1424, 2287, 3106
Bst4CI ACNGT 5 cut(s) 22, 1100, 1910, 2532, 2995
Bst6I CTCTTC 5 cut(s) 289, 789, 1488, 2559, 3641
BstACI GRCGYC 4 cut(s) 3125, 3362, 3559, 3858
BstAFI CTTAAG 2 cut(s) 1669, 1888
BstAPI GCANNNNNTGC 1 cut(s) 3801
BstBAI YACGTR 3 cut(s) 644, 3278, 3304
BstC8I GCNNGC 8 cut(s) 238, 433, 2696, 2818, 2974, 3286, 3360, 3375
BstDSI CCRYGG 4 cut(s) 1096, 2145, 2531, 3815
BstF5I GGATG 8 cut(s) 243, 1130, 1455, 2082, 2295, 3232, 3386, 3727
BstFNI CGCG 1 cut(s) 3065
BstH2I RGCGCY 2 cut(s) 125, 3128
BstHHI GCGC 2 cut(s) 124, 3127
BstMAI GTCTC 6 cut(s) 549, 849, 1561, 2343, 2387, 3589
BstMCI CGRYCG 1 cut(s) 3144
BstMWI GCNNNNNNNGC 8 cut(s) 2691, 2928, 2973, 3347, 3403, 3786, 3795, 3801
BstNI CCWGG 6 cut(s) 381, 560, 935, 1424, 2287, 3106
BstPAI GACNNNNGTC 1 cut(s) 2253
BstSFI CTRYAG 2 cut(s) 2219, 3851
BstSLI GKGCMC 2 cut(s) 2541, 3309
BstSNI TACGTA 1 cut(s) 644
BstUI CGCG 1 cut(s) 3065
BstV1I GCAGC 8 cut(s) 188, 591, 3067, 3293, 3788, 3792, 3807, 3810
BstX2I RGATCY 6 cut(s) 142, 151, 1848, 1973, 3205, 3900
BstXI CCANNNNNNTGG 1 cut(s) 2801
BstYI RGATCY 6 cut(s) 142, 151, 1848, 1973, 3205, 3900
BstZI CGGCCG 1 cut(s) 3141
Bsu15I ATCGAT 1 cut(s) 3833
Bsu36I CCTNAGG 1 cut(s) 2670
BsuI GTATCC 1 cut(s) 2144
BsuTUI ATCGAT 1 cut(s) 3833
BtgI CCRYGG 4 cut(s) 1096, 2145, 2531, 3815
BtrI CACGTC 4 cut(s) 843, 3345, 3381, 3401
BtsCI GGATG 8 cut(s) 243, 1130, 1455, 2082, 2295, 3232, 3386, 3727
BtsI GCAGTG 3 cut(s) 959, 2216, 3243
BtsIMutI CAGTG 6 cut(s) 615, 959, 1187, 1422, 2216, 3243
BveI ACCTGC 5 cut(s) 1339, 2187, 2230, 3417, 3612
Cac8I GCNNGC 8 cut(s) 238, 433, 2696, 2818, 2974, 3286, 3360, 3375
CaiI CAGNNNCTG 4 cut(s) 1162, 1559, 3409, 3801
CfoI GCGC 2 cut(s) 124, 3127
Cfr10I RCCGGY 4 cut(s) 236, 3118, 3159, 3443
Cfr9I CCCGGG 1 cut(s) 749
ClaI ATCGAT 1 cut(s) 3833
CseI GACGC 4 cut(s) 1363, 3339, 3351, 3567
Csp6I GTAC 2 cut(s) 1761, 2605
CspCI CAANNNNNGTGG 2 cut(s) 1973, 2008
CviQI GTAC 2 cut(s) 1761, 2605
DinI GGCGCC 1 cut(s) 3126
DraI TTTAAA 1 cut(s) 1056
DrdI GACNNNNNNGTC 2 cut(s) 1773, 3399
DseDI GACNNNNNNGTC 2 cut(s) 1773, 3399
EaeI YGGCCR 4 cut(s) 238, 3141, 3161, 3471
EagI CGGCCG 1 cut(s) 3141
Eam1104I CTCTTC 5 cut(s) 289, 789, 1488, 2559, 3641
EarI CTCTTC 5 cut(s) 289, 789, 1488, 2559, 3641
EciI GGCGGA 2 cut(s) 223, 2632
EclXI CGGCCG 1 cut(s) 3141
Eco105I TACGTA 1 cut(s) 644
Eco130I CCWWGG 5 cut(s) 808, 2145, 2251, 2577, 3771
Eco24I GRGCYC 1 cut(s) 3275
Eco32I GATATC 1 cut(s) 1528
Eco47I GGWCC 6 cut(s) 812, 931, 1406, 1775, 2945, 3296
Eco47III AGCGCT 1 cut(s) 123
Eco52I CGGCCG 1 cut(s) 3141
Eco57I CTGAAG 5 cut(s) 204, 1581, 2327, 2885, 3773
Eco72I CACGTG 2 cut(s) 3278, 3304
Eco81I CCTNAGG 1 cut(s) 2670
Eco88I CYCGRG 4 cut(s) 749, 2416, 3694, 3845
EcoO109I RGGNCCY 4 cut(s) 1406, 1694, 1775, 3287
EcoRI GAATTC 3 cut(s) 2061, 2808, 3676
EcoRII CCWGG 6 cut(s) 379, 558, 933, 1422, 2285, 3104
EcoRV GATATC 1 cut(s) 1528
EcoT14I CCWWGG 5 cut(s) 808, 2145, 2251, 2577, 3771
EcoT22I ATGCAT 1 cut(s) 2082
EcoT38I GRGCYC 1 cut(s) 3275
EgeI GGCGCC 1 cut(s) 3126
EheI GGCGCC 1 cut(s) 3126
ErhI CCWWGG 5 cut(s) 808, 2145, 2251, 2577, 3771
Esp3I CGTCTC 2 cut(s) 849, 3589
FalI AAGNNNNNCTT 4 cut(s) 2725, 2757, 3023, 3055
FaqI GGGAC 6 cut(s) 382, 951, 1392, 1405, 1761, 1811
FbaI TGATCA 1 cut(s) 595
FokI GGATG 8 cut(s) 230, 1117, 1442, 2089, 2302, 3219, 3373, 3714
FriOI GRGCYC 1 cut(s) 3275
FspBI CTAG 8 cut(s) 63, 776, 1632, 1758, 1946, 2036, 2159, 3761
GlaI GCGC 2 cut(s) 123, 3126
GsaI CCCAGC 1 cut(s) 3265
GsuI CTGGAG 1 cut(s) 234
HaeII RGCGCY 2 cut(s) 125, 3128
HgaI GACGC 4 cut(s) 1363, 3339, 3351, 3567
HhaI GCGC 2 cut(s) 124, 3127
Hin1I GRCGYC 4 cut(s) 3125, 3362, 3559, 3858
Hin6I GCGC 2 cut(s) 122, 3125
HinP1I GCGC 2 cut(s) 122, 3125
HincII GTYRAC 8 cut(s) 659, 1341, 1502, 2248, 3417, 3428, 3439, 3449
HindII GTYRAC 8 cut(s) 659, 1341, 1502, 2248, 3417, 3428, 3439, 3449
HindIII AAGCTT 6 cut(s) 433, 1594, 1750, 2275, 2339, 3527
HpaI GTTAAC 1 cut(s) 1341
HphI GGTGA 6 cut(s) 325, 1112, 1972, 2593, 2992, 3896
Hpy99I CGWCG 2 cut(s) 3561, 3863
HpyCH4III ACNGT 5 cut(s) 22, 1100, 1910, 2532, 2995
HpyCH4IV ACGT 8 cut(s) 643, 842, 3277, 3303, 3344, 3380, 3400, 3858
HpyF10VI GCNNNNNNNGC 8 cut(s) 2691, 2928, 2973, 3347, 3403, 3786, 3795, 3801
HpySE526I ACGT 8 cut(s) 643, 842, 3277, 3303, 3344, 3380, 3400, 3858
Hsp92I GRCGYC 4 cut(s) 3125, 3362, 3559, 3858
HspAI GCGC 2 cut(s) 122, 3125
KasI GGCGCC 1 cut(s) 3124
KflI GGGWCCC 1 cut(s) 1775
KroI GCCGGC 1 cut(s) 236
KroNI GCCGGC 1 cut(s) 238
Ksp22I TGATCA 1 cut(s) 595
KspAI GTTAAC 1 cut(s) 1341
LmnI GCTCC 5 cut(s) 627, 1230, 2147, 2674, 3762
Lsp1109I GCAGC 8 cut(s) 188, 591, 3067, 3293, 3788, 3792, 3807, 3810
LweI GCATC 6 cut(s) 599, 1611, 1987, 2067, 2423, 3750
MaeI CTAG 8 cut(s) 63, 776, 1632, 1758, 1946, 2036, 2159, 3761
MaeII ACGT 8 cut(s) 643, 842, 3277, 3303, 3344, 3380, 3400, 3858
MaeIII GTNAC 7 cut(s) 350, 1185, 1737, 1978, 2581, 2980, 3619
MbiI CCGCTC 1 cut(s) 2730
MfeI CAATTG 3 cut(s) 205, 1786, 1835
MflI RGATCY 6 cut(s) 142, 151, 1848, 1973, 3205, 3900
MhlI GDGCHC 4 cut(s) 2462, 2541, 3275, 3309
Mly113I GGCGCC 1 cut(s) 3125
MlyI GAGTC 3 cut(s) 1076, 1793, 3179
MmeI TCCRAC 7 cut(s) 219, 303, 1146, 1582, 2035, 2054, 2247
Mph1103I ATGCAT 1 cut(s) 2082
MroNI GCCGGC 1 cut(s) 236
MroXI GAANNNNTTC 2 cut(s) 469, 2740
MslI CAYNNNNRTG 2 cut(s) 246, 1415
MspA1I CMGCKG 2 cut(s) 3080, 3801
MspCI CTTAAG 2 cut(s) 1669, 1888
MssI GTTTAAAC 1 cut(s) 1056
MunI CAATTG 3 cut(s) 205, 1786, 1835
Mva1269I GAATGC 3 cut(s) 669, 2117, 2575
MvaI CCWGG 6 cut(s) 381, 560, 935, 1424, 2287, 3106
MvnI CGCG 1 cut(s) 3065
MwoI GCNNNNNNNGC 8 cut(s) 2691, 2928, 2973, 3347, 3403, 3786, 3795, 3801
NaeI GCCGGC 1 cut(s) 238
NarI GGCGCC 1 cut(s) 3125
NciI CCSGG 6 cut(s) 269, 750, 751, 868, 1870, 3654
NcoI CCATGG 1 cut(s) 2145
NgoMIV GCCGGC 1 cut(s) 236
NmuCI GTSAC 5 cut(s) 1185, 1978, 2581, 2980, 3619
NsiI ATGCAT 1 cut(s) 2082
PaeR7I CTCGAG 2 cut(s) 3694, 3845
PaqCI CACCTGC 2 cut(s) 2187, 3417
PasI CCCWGGG 1 cut(s) 1423
PcsI WCGNNNNNNNCGW 1 cut(s) 3300
PctI GAATGC 3 cut(s) 669, 2117, 2575
PdiI GCCGGC 1 cut(s) 238
PdmI GAANNNNTTC 2 cut(s) 469, 2740
PflMI CCANNNNNTGG 2 cut(s) 460, 2392
PfoI TCCNGGA 1 cut(s) 866
PleI GAGTC 3 cut(s) 1075, 1793, 3179
PluTI GGCGCC 1 cut(s) 3128
PmaCI CACGTG 2 cut(s) 3278, 3304
PmeI GTTTAAAC 1 cut(s) 1056
PmlI CACGTG 2 cut(s) 3278, 3304
PpsI GAGTC 3 cut(s) 1075, 1793, 3179
Ppu21I YACGTR 3 cut(s) 644, 3278, 3304
PpuMI RGGWCCY 2 cut(s) 1406, 1775
PshAI GACNNNNGTC 1 cut(s) 2253
PshBI ATTAAT 1 cut(s) 3552
Psp5II RGGWCCY 2 cut(s) 1406, 1775
Psp6I CCWGG 6 cut(s) 379, 558, 933, 1422, 2285, 3104
PspCI CACGTG 2 cut(s) 3278, 3304
PspFI CCCAGC 1 cut(s) 3261
PspGI CCWGG 6 cut(s) 379, 558, 933, 1422, 2285, 3104
PspPPI RGGWCCY 2 cut(s) 1406, 1775
PspXI VCTCGAGB 1 cut(s) 3694
PsrI GAACNNNNNNTAC 2 cut(s) 2843, 2875
PstI CTGCAG 1 cut(s) 2223
PstNI CAGNNNCTG 4 cut(s) 1162, 1559, 3409, 3801
PsuI RGATCY 6 cut(s) 142, 151, 1848, 1973, 3205, 3900
PvuII CAGCTG 1 cut(s) 3801
RsaI GTAC 2 cut(s) 1762, 2606
RsaNI GTAC 2 cut(s) 1761, 2605
RseI CAYNNNNRTG 2 cut(s) 246, 1415
SchI GAGTC 3 cut(s) 1076, 1793, 3179
SduI GDGCHC 4 cut(s) 2462, 2541, 3275, 3309
SfaNI GCATC 6 cut(s) 599, 1611, 1987, 2067, 2423, 3750
SfcI CTRYAG 2 cut(s) 2219, 3851
SfoI GGCGCC 1 cut(s) 3126
Sfr274I CTCGAG 2 cut(s) 3694, 3845
SinI GGWCC 6 cut(s) 812, 931, 1406, 1775, 2945, 3296
SlaI CTCGAG 2 cut(s) 3694, 3845
SmaI CCCGGG 1 cut(s) 751
SmiMI CAYNNNNRTG 2 cut(s) 246, 1415
SmlI CTYRAG 7 cut(s) 398, 1064, 1369, 1669, 1888, 3694, 3845
SmoI CTYRAG 7 cut(s) 398, 1064, 1369, 1669, 1888, 3694, 3845
SnaBI TACGTA 1 cut(s) 644
SpeI ACTAGT 2 cut(s) 62, 1631
SspDI GGCGCC 1 cut(s) 3124
SspI AATATT 1 cut(s) 2134
SspMI CTAG 8 cut(s) 63, 776, 1632, 1758, 1946, 2036, 2159, 3761
StyI CCWWGG 5 cut(s) 808, 2145, 2251, 2577, 3771
TaaI ACNGT 5 cut(s) 22, 1100, 1910, 2532, 2995
TaiI ACGT 8 cut(s) 646, 845, 3280, 3306, 3347, 3383, 3403, 3861
TatI WGTACW 2 cut(s) 1760, 2604
TauI GCSGC 7 cut(s) 2576, 3125, 3321, 3329, 3610, 3641, 3644
TscAI CASTG 6 cut(s) 615, 966, 1194, 1422, 2223, 3250
TseFI GTSAC 5 cut(s) 1185, 1978, 2581, 2980, 3619
TseI GCWGC 8 cut(s) 201, 604, 3080, 3281, 3780, 3795, 3798, 3801
Tsp45I GTSAC 5 cut(s) 1185, 1978, 2581, 2980, 3619
TspGWI ACGGA 4 cut(s) 1623, 2346, 3309, 3832
TspMI CCCGGG 1 cut(s) 749
TspRI CASTG 6 cut(s) 615, 966, 1194, 1422, 2223, 3250
Van91I CCANNNNNTGG 2 cut(s) 460, 2392
Vha464I CTTAAG 2 cut(s) 1669, 1888
VneI GTGCAC 1 cut(s) 3305
VpaK11BI GGWCC 6 cut(s) 812, 931, 1406, 1775, 2945, 3296
VspI ATTAAT 1 cut(s) 3552
XbaI TCTAGA 1 cut(s) 2035
XcmI CCANNNNNNNNNTGG 2 cut(s) 491, 2801
XhoI CTCGAG 2 cut(s) 3694, 3845
XmaI CCCGGG 1 cut(s) 749
XmnI GAANNNNTTC 2 cut(s) 469, 2740
XspI CTAG 8 cut(s) 63, 776, 1632, 1758, 1946, 2036, 2159, 3761
ZraI GACGTC 1 cut(s) 3859
Zsp2I ATGCAT 1 cut(s) 2082
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.