RLG00000026835

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000281
Physical Location & Seq
Reverse (-)
6367411 .. 6370323
2913 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026835

Sequence Viewer

Length: 2676 bp
ATGGGTAGGATCATGGGAGCGACATTACTTCTCTGGTTTCTAATCACTGCAACCACTAGCATTGGCTTGTGTAATGGGAACCCTGGTGTGGCTTGCAAAGAAAGTGAAAGACTAGCACTTCTGATGTTGAAGCAAGATTTTACTGATCCTTCAAATCGGCTTTTATCATGGGCAGGTGAAGGAGACTGTTGCCATTGGACTGGAGTTGTCTGTGATAATGTAACTGGTCACATACGCGAGCTCCACCTTGGTAATTACTCTTATCTCAACTCTTCCTCTTACTTGGTAGGTAAGATAAATCCTTCTCTGCTCAATTTAACGCAACTAACCTACTTGGACCTGAGTAACAACTTTTTCCAAGGAATGCAGATCCCTAGCTTCTTTGGTTCTTTTAATAGTTTAACTTATCTTGACCTTTCAAGAAGCTTCGAAGGAATGGTTCCTCCTCAACTGGGGAATCTCTCGAGTCTACGCGATCTACGTCTCAGTGGTTACGGTTTGAAGGCTGAGAACCTTCAATGGATTTCTGGTCTTTCTCAGTTGGAACACCTGGACGTGAGTTTTCTTGATCTTAGCAAAGTATCTGATGATTGGCTGCCAGTGATACAGATGCGGCTCCCCTCTTTGGTAGAGTTGCATATGTCAGCTTGCAGTCTGCATTACATTCCCCATTTAACTATCATCAATTTTACTTCACTTGCCGTCCTCGATCTTTCTGTCAACAACTTTAATTCTTTCATGCCTAAGTGGGTTTTCAGTTTCAGAAATCTGGTGTCTCTTTCTCTTAGAGATTGTGGTTTCCAAGGTCCAATTCCTAGCAGTAGCAGCCCACACAATATCACATCTCTCAGGGAGATTGATCTCTCAATTAATCACCTTAGGGATCCGATACCGAAATGGCTGCTCAACAACAAAGACCTTACTGTACTTGATCTAGGATACAATTCTTATACAGGACCAATTCCAGGTGGCATTGTGAATATGACTAGTCTTAAGGATCTTCATCTCGAGTCTAATTCTTTCATCTCTACCACACCTGAATGGTTGTCTAGTTTTAATAATCTTGAATCCTTGGATATTTCTAGCAATCACTTGCATGGTGAAATTTTGAGTTCCATTGGAAACTTGACATCCATTGTACATCTTGGTTTAGGTTTTAATCAGTTTGAAGGGACAATCCCAAACTCCTTGGGCAATCTGTCATCCTTAGAGTCATTACAGATTTCATGCAATCGGTTTCATGGAACTCTTCCAAAGACCACTGGCCAACTCAAAAGGCTGACATATTTGGATATATCTTTTAATTCATTTGAAGGTGAAGTGTCTGAAGTTCATTTTACACATCTTACAAGTTTAAAATCCTTCAGAGCACATGGAAACTCATTGACTCTAAAAACTAGTCGAGACTGGCTTCCTCCTTTTCAACTTCGAAGCTTGCATTTAGATTCTTGGCATTTGGGGCTTGAACTGCCTTCATGGCTTCGAACACAAACACAATTGCAGGAGCTAAGCCTATCTGGTACAGGAATTTCAGGTACCATTCCGACCTGGTGTTGGAACTTTTCTTCCGCACTAGTTTACCTGGATCTGTCCAACAATCAATTACATGGGGAGATTCAATATATAAATGTTGGTGCCCCATTCTCAATAATTGACCTGAGTTCAAACCATTTCAACGGTTCATTGCCTCTTGTCTCCTCCACTATAGAACTGCTAGATCTTTCGAATTCTTCATTTTCTGGATCTCTGTTCCACTTCTTTTGTGATAGGATGGACATACCAAAAGCGCTCAGTTTTCTTCATCTAGGGAACAATCATCTCAGTGGTGAAATTCCTGATTGTTGGATGAATTGGCTTGACTTGGAAGCCATAACATTAGGAGTCATTTCGGATCAACTTTGTAAGATAAGCCGTCTCCAAATCTTGGACTTGGCAGATAATGTTCTCTCAGGAACAATACCGAGATGCTTCGGCAACTTTAGTGGAATTGCAAACTCGTCAATGTCAGATGCTTTCGCTACTTACGTTGGTGACTATAGACTGTACAGAGGTAATACGTTCCTGGTGCAAAAAGGGAGAGAAGTGGAATTCGGAAAAATTCTTGGAATTGTAGCAAGCATAGATCTTTCTAACAACAATTTATCTGGGGATATTCCTGAGGAACTGACAAATCTCCTCAGTTTGCAGACATTGAATTTATCAGCAAATCTTTTGACCGGAAGAATCCCTTCGATGATTGGCAGATTGAGGCAGTTAGAATCACTTGATTTGTCTACAAACCAACTTTCTGGAGAAATTCCTCCAAGCATAACGAATTTGACGTTTCTGAGTCACTTGAACTTGTCTCACAACAGTCTGACGGGACAGATTCCACAAAGCACTCAGCTTCAGAGTCTTGATGAGTCCAGCTTTGTCGGCAATGAGCTTTGCGGACCTCCACTCAGCAAGAATTGCAGTGCAAACAAGGCGATGCCACCAACACTTGATCGGCAAGACAAAGGATATGATTTACTGGAAGATGAGTGGTTCTACCTGAGCTTGGGATTGGGATTCATGGTTGGTTTTTGGTGTATAATTGGTTCTTTACTGGTAAACATGCCATGGAGCTTTGCTTTTTCACGATTCCTCAATAGCATTGTGCTTGAACTTTATGCTGCAATTGATGAATATGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

892

Amino Acids

98.79

Weight (kDa)

5.22

Isoelectric Point (pI)

31.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 35 - 72 1.1e-11 Leucine rich repeat N-terminal domain
LRR_14 PF23598 88 - 262 1.8e-08 Leucine-rich repeat region
LRR_14 PF23598 189 - 386 1.2e-08 Leucine-rich repeat region
LRR_8 PF13855 282 - 340 5e-08 Leucine rich repeat
LRR_14 PF23598 305 - 505 1.1e-16 Leucine-rich repeat region
LRR_8 PF13855 402 - 462 1.6e-07 Leucine rich repeat
LRR_8 PF13855 705 - 762 8.4e-07 Leucine rich repeat
LRR_14 PF23598 719 - 801 6.8e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 164
Acc36I ACCTGC 1 cut(s) 164
Acc65I GGTACC 1 cut(s) 1535
AccB1I GGYRCC 2 cut(s) 1535, 1634
AccB7I CCANNNNNTGG 1 cut(s) 1924
AccI GTMKAC 2 cut(s) 469, 2273
AccII CGCG 2 cut(s) 237, 474
AciI CCGC 3 cut(s) 613, 1569, 2430
AclWI GGATC 9 cut(s) 17, 140, 364, 878, 891, 1005, 1593, 1750, 1899
AcoI YGGCCR 1 cut(s) 1264
AcsI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 2087, 2097, 2194, 2295, 2314
AcuI CTGAAG 3 cut(s) 1347, 1348, 2372
AfaI GTAC 5 cut(s) 927, 1140, 1522, 1537, 2045
AfeI AGCGCT 1 cut(s) 1788
AfiI CCNNNNNNNGG 7 cut(s) 88, 452, 625, 965, 1554, 1924, 2539
AflII CTTAAG 1 cut(s) 992
AhlI ACTAGT 3 cut(s) 986, 1397, 1573
AjiI CACGTC 1 cut(s) 556
AjnI CCWGG 6 cut(s) 82, 549, 964, 1547, 1581, 2061
AjuI GAANNNNNNNTTGG 2 cut(s) 795, 827
AloI GAACNNNNNNTCC 2 cut(s) 1550, 1582
Alw21I GWGCWC 2 cut(s) 243, 1372
Alw26I GTCTC 7 cut(s) 177, 488, 780, 1398, 1699, 1919, 2349
AlwI GGATC 9 cut(s) 17, 140, 364, 878, 891, 1005, 1593, 1750, 1899
Ama87I CYCGRG 2 cut(s) 463, 1007
Aor51HI AGCGCT 1 cut(s) 1788
AoxI GGCC 1 cut(s) 1264
ApeKI GCWGC 4 cut(s) 595, 825, 901, 2654
ApoI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 2087, 2097, 2194, 2295, 2314
AseI ATTAAT 1 cut(s) 870
Asp700I GAANNNNTTC 1 cut(s) 2227
Asp718I GGTACC 1 cut(s) 1535
AspLEI GCGC 1 cut(s) 1789
AspS9I GGNCC 4 cut(s) 337, 806, 956, 2432
AsuHPI GGTGA 6 cut(s) 188, 866, 1112, 1328, 1838, 2042
AsuII TTCGAA 4 cut(s) 429, 1429, 1483, 1724
AvaI CYCGRG 2 cut(s) 463, 1007
AvaII GGWCC 4 cut(s) 337, 806, 956, 2432
AxyI CCTNAGG 2 cut(s) 878, 2157
BaeGI GKGCMC 1 cut(s) 1639
BalI TGGCCA 1 cut(s) 1266
BamHI GGATCC 1 cut(s) 883
BanI GGYRCC 2 cut(s) 1535, 1634
BanII GRGCYC 1 cut(s) 243
Bbv12I GWGCWC 2 cut(s) 243, 1372
BbvI GCAGC 4 cut(s) 582, 837, 888, 2641
BccI CCATC 1 cut(s) 1765
BceAI ACGGC 2 cut(s) 686, 1896
BcgI CGANNNNNNTGC 2 cut(s) 883, 917
BciT130I CCWGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
BciVI GTATCC 1 cut(s) 932
BcoDI GTCTC 7 cut(s) 177, 488, 780, 1398, 1699, 1919, 2349
BcuI ACTAGT 3 cut(s) 986, 1397, 1573
BfmI CTRYAG 2 cut(s) 1704, 2035
BfoI RGCGCY 1 cut(s) 1790
BfrI CTTAAG 1 cut(s) 992
BfuAI ACCTGC 1 cut(s) 164
BfuI GTATCC 1 cut(s) 932
BglI GCCNNNNNGGC 1 cut(s) 1477
BglII AGATCT 2 cut(s) 1717, 2122
BisI GCNGC 5 cut(s) 596, 614, 826, 902, 2655
BlpI GCTNAGC 1 cut(s) 1508
BlsI GCNGC 5 cut(s) 597, 615, 827, 903, 2656
Bme1390I CCNGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
Bme18I GGWCC 4 cut(s) 337, 806, 956, 2432
BmeT110I CYCGRG 2 cut(s) 463, 1007
BmgBI CACGTC 1 cut(s) 556
BmgT120I GGNCC 4 cut(s) 337, 806, 956, 2432
BmiI GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
BmrFI CCNGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
BmrI ACTGGG 1 cut(s) 461
BmsI GCATC 4 cut(s) 600, 1955, 1999, 2460
BmuI ACTGGG 1 cut(s) 461
BpmI CTGGAG 2 cut(s) 222, 2310
Bpu10I CCTNAGC 1 cut(s) 2534
Bpu1102I GCTNAGC 1 cut(s) 1508
Bpu14I TTCGAA 4 cut(s) 429, 1429, 1483, 1724
BsaBI GATNNNNATC 1 cut(s) 1002
BsaJI CCNNGG 7 cut(s) 82, 247, 358, 802, 1071, 1188, 2600
BsaWI WCCGGW 1 cut(s) 2216
BsaXI ACNNNNNCTCC 2 cut(s) 225, 255
Bsc4I CCNNNNNNNGG 7 cut(s) 88, 452, 625, 965, 1554, 1924, 2539
Bse1I ACTGG 8 cut(s) 205, 229, 456, 599, 1267, 1412, 2517, 2592
Bse21I CCTNAGG 2 cut(s) 878, 2157
Bse3DI GCAATG 2 cut(s) 1682, 2425
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
BseDI CCNNGG 7 cut(s) 82, 247, 358, 802, 1071, 1188, 2600
BseGI GGATG 4 cut(s) 1130, 1202, 1776, 1851
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 7 cut(s) 88, 452, 625, 965, 1554, 1924, 2539
BseMI GCAATG 2 cut(s) 1682, 2425
BseNI ACTGG 8 cut(s) 205, 229, 456, 599, 1267, 1412, 2517, 2592
BseRI GAGGAG 3 cut(s) 435, 1687, 2165
BseSI GKGCMC 1 cut(s) 1639
BseXI GCAGC 4 cut(s) 582, 837, 888, 2641
Bsh1236I CGCG 2 cut(s) 237, 474
BshFI GGCC 1 cut(s) 1266
BshNI GGYRCC 2 cut(s) 1535, 1634
BsiHKAI GWGCWC 2 cut(s) 243, 1372
BsiHKCI CYCGRG 2 cut(s) 463, 1007
BsiSI CCGG 1 cut(s) 2217
BslFI GGGAC 2 cut(s) 1186, 2376
BslI CCNNNNNNNGG 7 cut(s) 88, 452, 625, 965, 1554, 1924, 2539
BsmAI GTCTC 7 cut(s) 177, 488, 780, 1398, 1699, 1919, 2349
BsmBI CGTCTC 2 cut(s) 488, 1919
BsmFI GGGAC 2 cut(s) 1186, 2376
BsmI GAATGC 1 cut(s) 369
BsnI GGCC 1 cut(s) 1266
BsoBI CYCGRG 2 cut(s) 463, 1007
Bsp119I TTCGAA 4 cut(s) 429, 1429, 1483, 1724
Bsp1286I GDGCHC 3 cut(s) 243, 1372, 1639
Bsp1407I TGTACA 2 cut(s) 1138, 2043
Bsp1720I GCTNAGC 1 cut(s) 1508
Bsp19I CCATGG 1 cut(s) 2600
BspACI CCGC 3 cut(s) 613, 1569, 2430
BspANI GGCC 1 cut(s) 1266
BspFNI CGCG 2 cut(s) 237, 474
BspLI GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
BspMI ACCTGC 1 cut(s) 164
BspPI GGATC 9 cut(s) 17, 140, 364, 878, 891, 1005, 1593, 1750, 1899
BspT104I TTCGAA 4 cut(s) 429, 1429, 1483, 1724
BspT107I GGYRCC 2 cut(s) 1535, 1634
BspTI CTTAAG 1 cut(s) 992
BsrDI GCAATG 2 cut(s) 1682, 2425
BsrGI TGTACA 2 cut(s) 1138, 2043
BsrI ACTGG 8 cut(s) 205, 229, 456, 599, 1267, 1412, 2517, 2592
BssECI CCNNGG 7 cut(s) 82, 247, 358, 802, 1071, 1188, 2600
BssT1I CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2600
Bst2UI CCWGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
Bst4CI ACNGT 6 cut(s) 188, 497, 925, 1679, 2043, 2354
Bst6I CTCTTC 2 cut(s) 277, 1254
BstAFI CTTAAG 1 cut(s) 992
BstAPI GCANNNNNTGC 1 cut(s) 2451
BstAUI TGTACA 2 cut(s) 1138, 2043
BstBI TTCGAA 4 cut(s) 429, 1429, 1483, 1724
BstC8I GCNNGC 5 cut(s) 94, 239, 649, 1436, 2116
BstDSI CCRYGG 1 cut(s) 2600
BstF5I GGATG 4 cut(s) 1130, 1202, 1776, 1851
BstFNI CGCG 2 cut(s) 237, 474
BstH2I RGCGCY 1 cut(s) 1790
BstHHI GCGC 1 cut(s) 1789
BstMAI GTCTC 7 cut(s) 177, 488, 780, 1398, 1699, 1919, 2349
BstMWI GCNNNNNNNGC 7 cut(s) 825, 1459, 1468, 1477, 2415, 2451, 2465
BstNI CCWGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
BstNSI RCATGY 1 cut(s) 2599
BstSCI CCNGG 6 cut(s) 82, 549, 964, 1547, 1581, 2061
BstSFI CTRYAG 2 cut(s) 1704, 2035
BstSLI GKGCMC 1 cut(s) 1639
BstUI CGCG 2 cut(s) 237, 474
BstV1I GCAGC 4 cut(s) 582, 837, 888, 2641
BstX2I RGATCY 7 cut(s) 369, 883, 997, 1585, 1717, 1742, 2122
BstXI CCANNNNNNTGG 2 cut(s) 200, 2288
BstYI RGATCY 7 cut(s) 369, 883, 997, 1585, 1717, 1742, 2122
Bsu36I CCTNAGG 2 cut(s) 878, 2157
BsuI GTATCC 1 cut(s) 932
BsuRI GGCC 1 cut(s) 1266
BtgI CCRYGG 1 cut(s) 2600
BtgZI GCGATG 1 cut(s) 2483
BtrI CACGTC 1 cut(s) 556
BtsCI GGATG 4 cut(s) 1130, 1202, 1776, 1851
BtsI GCAGTG 2 cut(s) 45, 2461
BtsIMutI CAGTG 6 cut(s) 45, 493, 606, 1260, 1828, 2461
BveI ACCTGC 1 cut(s) 164
Cac8I GCNNGC 5 cut(s) 94, 239, 649, 1436, 2116
CfoI GCGC 1 cut(s) 1789
Cfr13I GGNCC 4 cut(s) 337, 806, 956, 2432
CsiI ACCWGGT 1 cut(s) 1547
Csp6I GTAC 5 cut(s) 926, 1139, 1521, 1536, 2044
CspCI CAANNNNNGTGG 6 cut(s) 43, 78, 1742, 1777, 1963, 1998
CviQI GTAC 5 cut(s) 926, 1139, 1521, 1536, 2044
DraI TTTAAA 1 cut(s) 1356
EaeI YGGCCR 1 cut(s) 1264
Eam1104I CTCTTC 2 cut(s) 277, 1254
EarI CTCTTC 2 cut(s) 277, 1254
Ecl136II GAGCTC 1 cut(s) 241
Eco130I CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2600
Eco24I GRGCYC 1 cut(s) 243
Eco47I GGWCC 4 cut(s) 337, 806, 956, 2432
Eco47III AGCGCT 1 cut(s) 1788
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 3 cut(s) 1347, 1348, 2372
Eco81I CCTNAGG 2 cut(s) 878, 2157
Eco88I CYCGRG 2 cut(s) 463, 1007
EcoICRI GAGCTC 1 cut(s) 241
EcoRI GAATTC 2 cut(s) 1726, 2087
EcoRII CCWGG 6 cut(s) 82, 549, 964, 1547, 1581, 2061
EcoT14I CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2600
EcoT38I GRGCYC 1 cut(s) 243
ErhI CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2600
Esp3I CGTCTC 2 cut(s) 488, 1919
FalI AAGNNNNNCTT 2 cut(s) 2212, 2244
FaqI GGGAC 2 cut(s) 1186, 2376
FauNDI CATATG 1 cut(s) 639
FblI GTMKAC 2 cut(s) 469, 2273
Fnu4HI GCNGC 5 cut(s) 596, 614, 826, 902, 2655
FokI GGATG 4 cut(s) 1117, 1189, 1783, 1858
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 5 cut(s) 596, 614, 826, 902, 2655
GlaI GCGC 1 cut(s) 1788
GluI GCNGC 5 cut(s) 596, 614, 826, 902, 2655
GsuI CTGGAG 2 cut(s) 222, 2310
HaeII RGCGCY 1 cut(s) 1790
HaeIII GGCC 1 cut(s) 1266
HapII CCGG 1 cut(s) 2217
HhaI GCGC 1 cut(s) 1789
Hin6I GCGC 1 cut(s) 1787
HinP1I GCGC 1 cut(s) 1787
HincII GTYRAC 1 cut(s) 721
HindII GTYRAC 1 cut(s) 721
HindIII AAGCTT 2 cut(s) 424, 1432
HpaII CCGG 1 cut(s) 2217
HphI GGTGA 6 cut(s) 188, 866, 1112, 1328, 1838, 2042
Hpy166II GTNNAC 5 cut(s) 470, 721, 1579, 2274, 2593
Hpy8I GTNNAC 5 cut(s) 470, 721, 1579, 2274, 2593
HpyCH4III ACNGT 6 cut(s) 188, 497, 925, 1679, 2043, 2354
HpyCH4IV ACGT 5 cut(s) 481, 555, 2025, 2057, 2321
HpyF10VI GCNNNNNNNGC 7 cut(s) 825, 1459, 1468, 1477, 2415, 2451, 2465
HpySE526I ACGT 5 cut(s) 481, 555, 2025, 2057, 2321
HspAI GCGC 1 cut(s) 1787
KpnI GGTACC 1 cut(s) 1539
LmnI GCTCC 5 cut(s) 17, 246, 621, 1504, 2604
Lsp1109I GCAGC 4 cut(s) 582, 837, 888, 2641
LweI GCATC 4 cut(s) 600, 1955, 1999, 2460
MabI ACCWGGT 1 cut(s) 1547
MaeII ACGT 5 cut(s) 481, 555, 2025, 2057, 2321
MaeIII GTNAC 6 cut(s) 220, 227, 344, 491, 2030, 2330
MboII GAAGA 8 cut(s) 264, 992, 1241, 1557, 1722, 1790, 2232, 2528
MfeI CAATTG 2 cut(s) 1496, 2658
MflI RGATCY 7 cut(s) 369, 883, 997, 1585, 1717, 1742, 2122
MhlI GDGCHC 3 cut(s) 243, 1372, 1639
MlsI TGGCCA 1 cut(s) 1266
MluNI TGGCCA 1 cut(s) 1266
MlyI GAGTC 8 cut(s) 475, 1019, 1220, 1381, 1890, 2338, 2401, 2411
MmeI TCCRAC 5 cut(s) 522, 1535, 1568, 1617, 1823
Mox20I TGGCCA 1 cut(s) 1266
MroXI GAANNNNTTC 1 cut(s) 2227
MscI TGGCCA 1 cut(s) 1266
MslI CAYNNNNRTG 3 cut(s) 1039, 1095, 1821
Msp20I TGGCCA 1 cut(s) 1266
MspCI CTTAAG 1 cut(s) 992
MspI CCGG 1 cut(s) 2217
MspR9I CCNGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
MunI CAATTG 2 cut(s) 1496, 2658
Mva1269I GAATGC 1 cut(s) 369
MvaI CCWGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
MvnI CGCG 2 cut(s) 237, 474
MwoI GCNNNNNNNGC 7 cut(s) 825, 1459, 1468, 1477, 2415, 2451, 2465
NcoI CCATGG 1 cut(s) 2600
NdeI CATATG 1 cut(s) 639
NlaIV GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
NmuCI GTSAC 3 cut(s) 227, 2030, 2330
NspI RCATGY 1 cut(s) 2599
NspV TTCGAA 4 cut(s) 429, 1429, 1483, 1724
PaeR7I CTCGAG 2 cut(s) 463, 1007
PaqCI CACCTGC 1 cut(s) 164
PcsI WCGNNNNNNNCGW 3 cut(s) 478, 2022, 2318
PctI GAATGC 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 2227
PfeI GAWTC 9 cut(s) 457, 1067, 1445, 1615, 2223, 2258, 2368, 2550, 2622
PflMI CCANNNNNTGG 1 cut(s) 1924
PkrI GCNGC 5 cut(s) 597, 615, 827, 903, 2656
PleI GAGTC 8 cut(s) 474, 1018, 1219, 1381, 1889, 2337, 2400, 2410
PpsI GAGTC 8 cut(s) 474, 1018, 1219, 1381, 1889, 2337, 2400, 2410
PshBI ATTAAT 1 cut(s) 870
Psp124BI GAGCTC 1 cut(s) 243
Psp6I CCWGG 6 cut(s) 82, 549, 964, 1547, 1581, 2061
PspGI CCWGG 6 cut(s) 82, 549, 964, 1547, 1581, 2061
PspN4I GGNNCC 6 cut(s) 80, 441, 617, 885, 1537, 1636
PspPI GGNCC 4 cut(s) 337, 806, 956, 2432
PsrI GAACNNNNNNTAC 2 cut(s) 2563, 2595
PsuI RGATCY 7 cut(s) 369, 883, 997, 1585, 1717, 1742, 2122
RsaI GTAC 5 cut(s) 927, 1140, 1522, 1537, 2045
RsaNI GTAC 5 cut(s) 926, 1139, 1521, 1536, 2044
RseI CAYNNNNRTG 3 cut(s) 1039, 1095, 1821
SacI GAGCTC 1 cut(s) 243
SatI GCNGC 5 cut(s) 596, 614, 826, 902, 2655
Sau96I GGNCC 4 cut(s) 337, 806, 956, 2432
SchI GAGTC 8 cut(s) 475, 1019, 1220, 1381, 1890, 2338, 2401, 2411
ScrFI CCNGG 6 cut(s) 84, 551, 966, 1549, 1583, 2063
SduI GDGCHC 3 cut(s) 243, 1372, 1639
SexAI ACCWGGT 1 cut(s) 1547
SfaNI GCATC 4 cut(s) 600, 1955, 1999, 2460
SfcI CTRYAG 2 cut(s) 1704, 2035
Sfr274I CTCGAG 2 cut(s) 463, 1007
SfuI TTCGAA 4 cut(s) 429, 1429, 1483, 1724
SinI GGWCC 4 cut(s) 337, 806, 956, 2432
SlaI CTCGAG 2 cut(s) 463, 1007
SmiMI CAYNNNNRTG 3 cut(s) 1039, 1095, 1821
SmlI CTYRAG 3 cut(s) 463, 992, 1007
SmoI CTYRAG 3 cut(s) 463, 992, 1007
SpeI ACTAGT 3 cut(s) 986, 1397, 1573
SsiI CCGC 3 cut(s) 613, 1569, 2430
SstI GAGCTC 1 cut(s) 243
StyD4I CCNGG 6 cut(s) 82, 549, 964, 1547, 1581, 2061
StyI CCWWGG 6 cut(s) 247, 358, 802, 1071, 1188, 2600
TaaI ACNGT 6 cut(s) 188, 497, 925, 1679, 2043, 2354
TaiI ACGT 5 cut(s) 484, 558, 2028, 2060, 2324
TaqI TCGA 9 cut(s) 429, 464, 708, 1008, 1402, 1429, 1483, 1724, 2231
TatI WGTACW 3 cut(s) 925, 1138, 2043
TauI GCSGC 1 cut(s) 616
TfiI GAWTC 9 cut(s) 457, 1067, 1445, 1615, 2223, 2258, 2368, 2550, 2622
TscAI CASTG 6 cut(s) 52, 493, 606, 1267, 1828, 2461
TseFI GTSAC 3 cut(s) 227, 2030, 2330
TseI GCWGC 4 cut(s) 595, 825, 901, 2654
Tsp45I GTSAC 3 cut(s) 227, 2030, 2330
TspRI CASTG 6 cut(s) 52, 493, 606, 1267, 1828, 2461
Van91I CCANNNNNTGG 1 cut(s) 1924
Vha464I CTTAAG 1 cut(s) 992
VpaK11BI GGWCC 4 cut(s) 337, 806, 956, 2432
VspI ATTAAT 1 cut(s) 870
XapI RAATTY 9 cut(s) 1104, 1527, 1726, 1830, 2087, 2097, 2194, 2295, 2314
XceI RCATGY 1 cut(s) 2599
XhoI CTCGAG 2 cut(s) 463, 1007
XmiI GTMKAC 2 cut(s) 469, 2273
XmnI GAANNNNTTC 1 cut(s) 2227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.