MD15G1439600.v1.1

Leucine Rich Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000281
Physical Location & Seq
Forward (+)
53962766 .. 53964661
1896 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1439600.v1.1.491

Sequence Viewer

Length: 1896 bp
ATGGTTCTCGAATTTTCGAGGAACAATTTTAGCGGAAGCATTTCAGAAATATTTGAAAGCTTGTCTACGTGCAGTTCAGGGCGCATTGAGTTATTGGGTCTATCAGATAATAATCTTTCAGGTTATCTGTCTCAGCTTGGTAACTTCAAAAATTTAGGCTCGCTTGACTTTTCAAGTAATTCAATATCAGGTCCGATTCCAGTATCTTTGGGAAATCTGTCATGCTTAGAAAGTTTGGACATTGGTAACAATCAATTAGAGGGTGTTGTCTCCGAAGTTCATTTCACCAATCTTACAAAACTGAAATACTTTTATGCAAGCGAAAATTCGCTGACTCTGAAAACTAGTCTAGATTGGCTTCCTCCCTTCCAACTAAACACCTTGTTTCTAAATTCTTGGCATCTAGAGCCATCAGAGTTGCCTGCATGGCTTCAAACTCAAACAAAACTGTATGCTCTTAACCTGTCAAATACAGCTATTTCAGGTATCATTCCTACTTGGTTTTGGAACTTTTCCTCCCTTGGATTAGGCCTTTTGGATCTCTCTTACAATCAATTGTACGGAAAGGTTCCGAATATAGATTCTATGTCTTCAGAAGTAATTAACCTAGGTTCTAACCAGTTCCACGGTTCATTACCTTTGTTTTCTTCCCACATAACTACACTAGATCTTTCCAACTCATCATTTTCCGGAACTCTGTTTCATTTCTTTTGTGACAAGACTGATGGGCCAAAACAACTTGAAATTCTTCAACTTCAAGACAATTTTCTCAACGGAGAAATTCCTGACTGTTTGGACAATCTACAAAACTTGACACTTCTCAACTTAGAAAACAACAATTTGGGTGGGAACATTCCAGCCTCCGTTGGACACTTAGGACTCCTCCGATCATTGCACTTGCGCAATAATCACTTATCTGGAGAAGTACCTACTTCCCTACAAAAATGTGAGTCCTTGTTCCTTCTTGATCTTCACAAAAATGAATTTGTTGGAACCATACCAACATGGATTGGTAAAAGTCTTTCACATTTGGGAATTCTCAGCCTCCGTTCGAACATGCTTCACGACAACATTCCTCATGAACTATGCAGTCTCCGAAATCTCCAGATCCTAGACGTCGCGGACAACCACCTTTCCGGAGCAATACCAACATGTTTCAAGAATTTCACAGCCATGGCAAATTTTTCAAACTCGAGAGACCCCATTTTGTTCTCCACTATATCATTTGGTGATGGTGAAGCCTCCTTCGAGGACAACTACATAGAGAATGCAATCTTGGTGAGAAAAGGTAGAGAGATGGAGTATAACAAAATACTTACTTTGGTGACAAGCTTGGACCTTTCAGACAACTTTATATCCGGAGAGATCCCTGAAGAGCTGACCAGCCTCATCTACTTGCAATCATTCAACTTATCAGGAAATCTTTTGGTTGGAAAAATCCCTTCAAAGATTGGTGATATGAGATGGTTGGAATCTCTCGATCTCTCGAGGAACAAACTTACTGGTCAGATTTCTCCAAGCATGTCAAAGTTAACATTTCTAAGCAACTTGAACTTGTCCTACAACTATCTGACAGGACAGATTCCAGAAAGCACACAGCTTCAGAGCCTTGATAGGTCGAGTTTCTTTGGCAATAAACTTTGTGGACCTCCACTGGAAAAGTGCAGCACAACCCATGGTGGGAGTTCAATTTCATCGGGTGATCAAAAAAAGGGAGGAATTGGTCGTTTACTTGAAGACGGTTGGTTGGATCTGAGCTTGGGACTAGGGTTTGCATTTGGATTTTGGAGTGTTCTTGGCTCGTTGTTGTTGAACATGCCATGGAGTACTGGGTTTTCGCGGTTCCAAAATAATATTGTGAGCAAGCTCTATGCCATAATTCAAGAGAAACTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

632

Amino Acids

69.61

Weight (kDa)

5.11

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 247 - 373 9.7e-08 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1119
Acc16I TGCGCA 1 cut(s) 902
AccI GTMKAC 1 cut(s) 65
AccII CGCG 2 cut(s) 1121, 1840
AccIII TCCGGA 3 cut(s) 689, 1136, 1358
AciI CCGC 3 cut(s) 33, 1121, 1840
AclWI GGATC 4 cut(s) 546, 1102, 1360, 1758
AcuI CTGAAG 3 cut(s) 576, 1392, 1586
AcyI GRCGYC 1 cut(s) 1116
AfaI GTAC 3 cut(s) 560, 927, 1828
AfiI CCNNNNNNNGG 1 cut(s) 1680
AflIII ACRYGT 1 cut(s) 1151
AhlI ACTAGT 1 cut(s) 344
AjuI GAANNNNNNNTTGG 2 cut(s) 1259, 1291
AloI GAACNNNNNNTCC 2 cut(s) 500, 532
AluBI AGCT 8 cut(s) 60, 136, 476, 1332, 1378, 1600, 1758, 1867
AluI AGCT 8 cut(s) 60, 136, 476, 1332, 1378, 1600, 1758, 1867
Alw26I GTCTC 4 cut(s) 135, 274, 1097, 1191
AlwI GGATC 4 cut(s) 546, 1102, 1360, 1758
Ama87I CYCGRG 2 cut(s) 1192, 1486
Aor13HI TCCGGA 3 cut(s) 689, 1136, 1358
AoxI GGCC 2 cut(s) 529, 728
ApeKI GCWGC 1 cut(s) 1665
Asp700I GAANNNNTTC 2 cut(s) 40, 747
AspA2I CCTAGG 1 cut(s) 607
AspLEI GCGC 2 cut(s) 84, 903
AspS9I GGNCC 4 cut(s) 191, 728, 1336, 1646
AsuHPI GGTGA 7 cut(s) 277, 1241, 1247, 1291, 1336, 1466, 1712
AsuII TTCGAA 1 cut(s) 1052
AvaI CYCGRG 2 cut(s) 1192, 1486
AvaII GGWCC 3 cut(s) 191, 1336, 1646
AvrII CCTAGG 1 cut(s) 607
BbsI GAAGAC 2 cut(s) 582, 1743
BbvI GCAGC 1 cut(s) 1677
BccI CCATC 5 cut(s) 418, 719, 1226, 1291, 1458
BclI TGATCA 1 cut(s) 1702
BcoDI GTCTC 4 cut(s) 135, 274, 1097, 1191
BcuI ACTAGT 1 cut(s) 344
BfaI CTAG 7 cut(s) 345, 350, 404, 608, 665, 1112, 1766
BglI GCCNNNNNGGC 1 cut(s) 427
BglII AGATCT 1 cut(s) 667
BisI GCNGC 1 cut(s) 1666
BlnI CCTAGG 1 cut(s) 607
BlsI GCNGC 1 cut(s) 1667
BmcAI AGTACT 1 cut(s) 1828
Bme18I GGWCC 3 cut(s) 191, 1336, 1646
BmeT110I CYCGRG 2 cut(s) 1192, 1486
BmgT120I GGNCC 4 cut(s) 191, 728, 1336, 1646
BmiI GGNNCC 3 cut(s) 570, 994, 1844
BmrI ACTGGG 1 cut(s) 1839
BmsI GCATC 1 cut(s) 409
BmuI ACTGGG 1 cut(s) 1839
BpiI GAAGAC 2 cut(s) 582, 1743
BpmI CTGGAG 2 cut(s) 939, 1088
Bpu14I TTCGAA 1 cut(s) 1052
BsaAI YACGTR 1 cut(s) 69
BsaBI GATNNNNATC 1 cut(s) 111
BsaHI GRCGYC 1 cut(s) 1116
BsaI GGTCTC 1 cut(s) 1191
BsaJI CCNNGG 6 cut(s) 520, 607, 625, 1173, 1675, 1820
BsaWI WCCGGW 3 cut(s) 689, 1136, 1358
BsaXI ACNNNNNCTCC 2 cut(s) 500, 530
Bsc4I CCNNNNNNNGG 1 cut(s) 1680
Bse1I ACTGG 5 cut(s) 200, 619, 1507, 1659, 1834
Bse3DI GCAATG 1 cut(s) 890
Bse8I GATNNNNATC 1 cut(s) 111
BseAI TCCGGA 3 cut(s) 689, 1136, 1358
BseDI CCNNGG 6 cut(s) 520, 607, 625, 1173, 1675, 1820
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 1 cut(s) 1680
BseMI GCAATG 1 cut(s) 890
BseMII CTCAG 3 cut(s) 146, 1054, 1745
BseNI ACTGG 5 cut(s) 200, 619, 1507, 1659, 1834
BseRI GAGGAG 1 cut(s) 872
BseXI GCAGC 1 cut(s) 1677
BsgI GTGCAG 2 cut(s) 91, 1684
Bsh1236I CGCG 2 cut(s) 1121, 1840
BshFI GGCC 2 cut(s) 531, 730
BsiHKCI CYCGRG 2 cut(s) 1192, 1486
BsiSI CCGG 3 cut(s) 690, 1137, 1359
BslFI GGGAC 1 cut(s) 1776
BslI CCNNNNNNNGG 1 cut(s) 1680
BsmAI GTCTC 4 cut(s) 135, 274, 1097, 1191
BsmFI GGGAC 1 cut(s) 1776
BsmI GAATGC 1 cut(s) 1273
BsnI GGCC 2 cut(s) 531, 730
Bso31I GGTCTC 1 cut(s) 1191
BsoBI CYCGRG 2 cut(s) 1192, 1486
Bsp119I TTCGAA 1 cut(s) 1052
Bsp13I TCCGGA 3 cut(s) 689, 1136, 1358
Bsp143I GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
Bsp19I CCATGG 3 cut(s) 1173, 1675, 1820
BspACI CCGC 3 cut(s) 33, 1121, 1840
BspANI GGCC 2 cut(s) 531, 730
BspCNI CTCAG 3 cut(s) 145, 1053, 1746
BspEI TCCGGA 3 cut(s) 689, 1136, 1358
BspFNI CGCG 2 cut(s) 1121, 1840
BspHI TCATGA 1 cut(s) 1078
BspLI GGNNCC 3 cut(s) 570, 994, 1844
BspPI GGATC 4 cut(s) 546, 1102, 1360, 1758
BspQI GCTCTTC 1 cut(s) 1368
BspT104I TTCGAA 1 cut(s) 1052
BspTNI GGTCTC 1 cut(s) 1191
BsrDI GCAATG 1 cut(s) 890
BsrI ACTGG 5 cut(s) 200, 619, 1507, 1659, 1834
BssECI CCNNGG 6 cut(s) 520, 607, 625, 1173, 1675, 1820
BssMI GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
BssNI GRCGYC 1 cut(s) 1116
BssT1I CCWWGG 5 cut(s) 520, 607, 1173, 1675, 1820
Bst4CI ACNGT 4 cut(s) 450, 629, 791, 1742
Bst6I CTCTTC 1 cut(s) 1368
BstACI GRCGYC 1 cut(s) 1116
BstBAI YACGTR 1 cut(s) 69
BstBI TTCGAA 1 cut(s) 1052
BstC8I GCNNGC 4 cut(s) 161, 319, 423, 1865
BstDEI CTNAG 7 cut(s) 132, 226, 826, 874, 1040, 1541, 1754
BstDSI CCRYGG 4 cut(s) 625, 1173, 1675, 1820
BstFNI CGCG 2 cut(s) 1121, 1840
BstHHI GCGC 2 cut(s) 84, 903
BstKTI GATC 9 cut(s) 541, 670, 890, 970, 1110, 1368, 1483, 1705, 1753
BstMAI GTCTC 4 cut(s) 135, 274, 1097, 1191
BstMBI GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
BstMWI GCNNNNNNNGC 2 cut(s) 406, 427
BstNSI RCATGY 4 cut(s) 1060, 1155, 1525, 1819
BstUI CGCG 2 cut(s) 1121, 1840
BstV1I GCAGC 1 cut(s) 1677
BstV2I GAAGAC 2 cut(s) 582, 1743
BstX2I RGATCY 5 cut(s) 538, 667, 1107, 1365, 1750
BstYI RGATCY 5 cut(s) 538, 667, 1107, 1365, 1750
BsuRI GGCC 2 cut(s) 531, 730
BtgI CCRYGG 4 cut(s) 625, 1173, 1675, 1820
BtsIMutI CAGTG 1 cut(s) 1652
Cac8I GCNNGC 4 cut(s) 161, 319, 423, 1865
CciI TCATGA 1 cut(s) 1078
CfoI GCGC 2 cut(s) 84, 903
Cfr13I GGNCC 4 cut(s) 191, 728, 1336, 1646
Csp6I GTAC 3 cut(s) 559, 926, 1827
CspCI CAANNNNNGTGG 2 cut(s) 826, 861
CviQI GTAC 3 cut(s) 559, 926, 1827
DdeI CTNAG 7 cut(s) 132, 226, 826, 874, 1040, 1541, 1754
DpnI GATC 9 cut(s) 540, 669, 889, 969, 1109, 1367, 1482, 1704, 1752
DpnII GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
Eam1104I CTCTTC 1 cut(s) 1368
EarI CTCTTC 1 cut(s) 1368
Eco130I CCWWGG 5 cut(s) 520, 607, 1173, 1675, 1820
Eco147I AGGCCT 1 cut(s) 531
Eco31I GGTCTC 1 cut(s) 1191
Eco47I GGWCC 3 cut(s) 191, 1336, 1646
Eco57I CTGAAG 3 cut(s) 576, 1392, 1586
Eco88I CYCGRG 2 cut(s) 1192, 1486
EcoRI GAATTC 1 cut(s) 1035
EcoT14I CCWWGG 5 cut(s) 520, 607, 1173, 1675, 1820
ErhI CCWWGG 5 cut(s) 520, 607, 1173, 1675, 1820
FaqI GGGAC 1 cut(s) 1776
FbaI TGATCA 1 cut(s) 1702
FblI GTMKAC 1 cut(s) 65
Fnu4HI GCNGC 1 cut(s) 1666
Fsp4HI GCNGC 1 cut(s) 1666
FspBI CTAG 7 cut(s) 345, 350, 404, 608, 665, 1112, 1766
FspI TGCGCA 1 cut(s) 902
GlaI GCGC 2 cut(s) 83, 902
GluI GCNGC 1 cut(s) 1666
GsuI CTGGAG 2 cut(s) 939, 1088
HaeIII GGCC 2 cut(s) 531, 730
HapII CCGG 3 cut(s) 690, 1137, 1359
HhaI GCGC 2 cut(s) 84, 903
Hin1I GRCGYC 1 cut(s) 1116
Hin6I GCGC 2 cut(s) 82, 901
HinP1I GCGC 2 cut(s) 82, 901
HincII GTYRAC 1 cut(s) 1533
HindII GTYRAC 1 cut(s) 1533
HindIII AAGCTT 2 cut(s) 58, 1330
HinfI GANTC 7 cut(s) 196, 334, 581, 879, 950, 1472, 1582
HpaI GTTAAC 1 cut(s) 1533
HpaII CCGG 3 cut(s) 690, 1137, 1359
HphI GGTGA 7 cut(s) 277, 1241, 1247, 1291, 1336, 1466, 1712
Hpy166II GTNNAC 4 cut(s) 66, 1533, 1646, 1730
Hpy8I GTNNAC 4 cut(s) 66, 1533, 1646, 1730
Hpy99I CGWCG 1 cut(s) 1121
HpyAV CCTTC 4 cut(s) 376, 971, 1255, 1452
HpyCH4III ACNGT 4 cut(s) 450, 629, 791, 1742
HpyCH4IV ACGT 2 cut(s) 68, 1116
HpyCH4V TGCA 9 cut(s) 72, 317, 425, 895, 1089, 1271, 1399, 1665, 1775
HpyF10VI GCNNNNNNNGC 2 cut(s) 406, 427
HpyF3I CTNAG 7 cut(s) 132, 226, 826, 874, 1040, 1541, 1754
HpySE526I ACGT 2 cut(s) 68, 1116
Hsp92I GRCGYC 1 cut(s) 1116
HspAI GCGC 2 cut(s) 82, 901
Kpn2I TCCGGA 3 cut(s) 689, 1136, 1358
Ksp22I TGATCA 1 cut(s) 1702
KspAI GTTAAC 1 cut(s) 1533
Kzo9I GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
LguI GCTCTTC 1 cut(s) 1368
LmnI GCTCC 1 cut(s) 1139
Lsp1109I GCAGC 1 cut(s) 1677
LweI GCATC 1 cut(s) 409
MaeI CTAG 7 cut(s) 345, 350, 404, 608, 665, 1112, 1766
MaeII ACGT 2 cut(s) 68, 1116
MaeIII GTNAC 4 cut(s) 140, 245, 713, 1324
MalI GATC 9 cut(s) 540, 669, 889, 969, 1109, 1367, 1482, 1704, 1752
MboI GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
MboII GAAGA 6 cut(s) 582, 639, 740, 962, 1385, 1748
MfeI CAATTG 1 cut(s) 554
MflI RGATCY 5 cut(s) 538, 667, 1107, 1365, 1750
MlyI GAGTC 3 cut(s) 328, 873, 959
MmeI TCCRAC 7 cut(s) 394, 699, 847, 970, 1411, 1449, 1728
MroI TCCGGA 3 cut(s) 689, 1136, 1358
MroXI GAANNNNTTC 2 cut(s) 40, 747
MseI TTAA 3 cut(s) 459, 603, 1532
MslI CAYNNNNRTG 2 cut(s) 978, 1172
MspI CCGG 3 cut(s) 690, 1137, 1359
MunI CAATTG 1 cut(s) 554
Mva1269I GAATGC 1 cut(s) 1273
MvnI CGCG 2 cut(s) 1121, 1840
MwoI GCNNNNNNNGC 2 cut(s) 406, 427
NcoI CCATGG 3 cut(s) 1173, 1675, 1820
NdeII GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
NlaIV GGNNCC 3 cut(s) 570, 994, 1844
NmuCI GTSAC 2 cut(s) 713, 1324
NsbI TGCGCA 1 cut(s) 902
NspI RCATGY 4 cut(s) 1060, 1155, 1525, 1819
NspV TTCGAA 1 cut(s) 1052
PaeR7I CTCGAG 2 cut(s) 1192, 1486
PagI TCATGA 1 cut(s) 1078
PceI AGGCCT 1 cut(s) 531
PciI ACATGT 1 cut(s) 1151
PciSI GCTCTTC 1 cut(s) 1368
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 2 cut(s) 40, 747
PfeI GAWTC 4 cut(s) 196, 581, 1472, 1582
PkrI GCNGC 1 cut(s) 1667
PleI GAGTC 3 cut(s) 328, 873, 958
PpsI GAGTC 3 cut(s) 328, 873, 958
Ppu21I YACGTR 1 cut(s) 69
PscI ACATGT 1 cut(s) 1151
PspN4I GGNNCC 3 cut(s) 570, 994, 1844
PspPI GGNCC 4 cut(s) 191, 728, 1336, 1646
PsrI GAACNNNNNNTAC 2 cut(s) 1544, 1576
PsuI RGATCY 5 cut(s) 538, 667, 1107, 1365, 1750
RsaI GTAC 3 cut(s) 560, 927, 1828
RsaNI GTAC 3 cut(s) 559, 926, 1827
RseI CAYNNNNRTG 2 cut(s) 978, 1172
SapI GCTCTTC 1 cut(s) 1368
SaqAI TTAA 3 cut(s) 459, 603, 1532
SatI GCNGC 1 cut(s) 1666
Sau3AI GATC 9 cut(s) 538, 667, 887, 967, 1107, 1365, 1480, 1702, 1750
Sau96I GGNCC 4 cut(s) 191, 728, 1336, 1646
ScaI AGTACT 1 cut(s) 1828
SchI GAGTC 3 cut(s) 328, 873, 959
SfaNI GCATC 1 cut(s) 409
Sfr274I CTCGAG 2 cut(s) 1192, 1486
SfuI TTCGAA 1 cut(s) 1052
SinI GGWCC 3 cut(s) 191, 1336, 1646
SlaI CTCGAG 2 cut(s) 1192, 1486
SmiMI CAYNNNNRTG 2 cut(s) 978, 1172
SmlI CTYRAG 2 cut(s) 1192, 1486
SmoI CTYRAG 2 cut(s) 1192, 1486
SpeI ACTAGT 1 cut(s) 344
SseBI AGGCCT 1 cut(s) 531
SsiI CCGC 3 cut(s) 33, 1121, 1840
SspI AATATT 2 cut(s) 51, 1855
SspMI CTAG 7 cut(s) 345, 350, 404, 608, 665, 1112, 1766
StuI AGGCCT 1 cut(s) 531
StyI CCWWGG 5 cut(s) 520, 607, 1173, 1675, 1820
TaaI ACNGT 4 cut(s) 450, 629, 791, 1742
TaiI ACGT 2 cut(s) 71, 1119
TaqI TCGA 8 cut(s) 9, 17, 1052, 1193, 1248, 1479, 1487, 1619
TatI WGTACW 1 cut(s) 1826
TfiI GAWTC 4 cut(s) 196, 581, 1472, 1582
Tru1I TTAA 3 cut(s) 459, 603, 1532
Tru9I TTAA 3 cut(s) 459, 603, 1532
TscAI CASTG 1 cut(s) 1659
TseFI GTSAC 2 cut(s) 713, 1324
TseI GCWGC 1 cut(s) 1665
Tsp45I GTSAC 2 cut(s) 713, 1324
TspDTI ATGAA 6 cut(s) 269, 621, 692, 996, 1095, 1683
TspGWI ACGGA 4 cut(s) 576, 789, 853, 1037
TspRI CASTG 1 cut(s) 1659
VpaK11BI GGWCC 3 cut(s) 191, 1336, 1646
XbaI TCTAGA 2 cut(s) 349, 403
XceI RCATGY 4 cut(s) 1060, 1155, 1525, 1819
XhoI CTCGAG 2 cut(s) 1192, 1486
XmaJI CCTAGG 1 cut(s) 607
XmiI GTMKAC 1 cut(s) 65
XmnI GAANNNNTTC 2 cut(s) 40, 747
XspI CTAG 7 cut(s) 345, 350, 404, 608, 665, 1112, 1766
ZraI GACGTC 1 cut(s) 1117
ZrmI AGTACT 1 cut(s) 1828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.