Rw1G034970

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000281
Physical Location & Seq
Reverse (-)
62840007 .. 62842523
2517 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G034970.1

Sequence Viewer

Length: 1953 bp
ATGACCCCATATTATGGACTGTTTGAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATCCCAGGTGGTTTTTTAGTCTTAGAAATCTAGCTTCTCTTGATCTTTCTGGATGTGGTTTCCAAGGTCCAATTCCTGGTCCAATTCCAGTGTCCCTAGGAAATCTGTTATCCTTGAGGAACTTAGATATTTCTCACAATCAGTTCAATGGAACTCTTCCAGAAACTATTGGGCAACTCAAATTGCTAACAGAGTTAGAGATTTCTTATAATTCATTAGAAGGTGTAGTGTCTGAAGCTCATTTTACTGGTCTTGCAAGCTTGGAGTTCTTCAATGCTAATGCAAACTCGTTGACTCTGAAAACTCATCGAGGCTGGTTTCCTCCTTTTAGTCTTCAAAGGTTGGTCTTAGACTCTTGGCAGATGGGGCCTGAATTTCCCGTGTGGCTTCAGAGACAGACTAGATTGCAATTTTTAAGCCTATCCGACACAGGAATTTCAGCTACCATTCCGACTTGGTTTTGGAACTTTTCTTCCCAATTATATTACATGAATCTCTCACACAATCAATTGTATGGGGAGATTCAAAATATAGTTGCTGCAGAAGGGTCAATAGTTGACCTTGGTTCTAACCAGTTCAATGGTTCATTACCCCTTGTCTCCTCAGCAGTAAATTTACTAGATCTCTCCAATTCATCCTTTTCCGGTTCTGTCTTCCATTTCTTTTGTGATAAGATCAATATACCAAAGCAAGTTTCATATCTGTATCTCGGAAACAATCTTGTCAGTGGAAACATTCCTGATTGTTGGATGAATTGGGGACTTTTGCAAGTGCTGAATTTAGAGAACAACAATTTAACTGGAAACATTCCGAGCTCCATGGAGTCCTTAAACCTCCTGCAATCATTGCACTTGCGCAATAATGGTCTATCTGGAGAGTTACCTCCATCCCTGATGTATTCCATGAATATGAGGGTTCTTGACATTGGTGAAAATAAGTTTGTGGGAAGGTTACCAGCAGCAATGATAGAAAATGGCTATTCAAGTTTGTTGGTTCTTAACCTTCGTTCCAATAAGCTTCAAGGAGGCATTCCTGATGAACTCTGTGCTCTCAGTAATCTCCAGATCTTGGACCTTGCTGATAACAATCTCTCAGGTACAATACCAAGGTGCGTTAAGAATTTCAGTGCCATGGCCAGATTGCCAAGATCAGATGGTTCCATTGAATTGTTTAATATTGTTGATTATGGAAAGTACTTGGATAAAACATTCCTAGTGACAAAAGGAAGAGAAGTGGAATATAGTGAGATTCTTGGATTGGTAACGAGCATGGACCTTTCTAATAACATTATATCTGGGGAGATTCCTGAGCAACTGACCAGTCTCTTTGGCTTGCAAACATTGAACTTATCAAACAATCTTTTGACAGGAAGAATCCCTTCAAAGATTGGAAATATGGTTCAATTGGAATCTCTCGATTTGTCCAAGAATCAACTTTTTGGTGAAATTCCTGCAAGCATGACAAGTATGACATTTCTGAGTCGCTTGAACTTGTCCTACAACAATCTGGCAGGACGGATTCCTGAAAGCACTCAGCTCCAGAGCCTTGATCAGTCCAGCTTTGTTGGCAATGAACTTTGCGGAGCTCCACTCATCAAGAATTGTAGTGCAAGCAAGGTGACACCACCAACAGTTGAGCAACACAGCGGATATGATTTACTCAAAGACAAGTGGTTCTACCTGAGCTTGGGATTGGGATTCGCGGTTGGTTTTTGGAGTATACTTGGTTCCTTGCTGGTAAACATGCCATGGAGCTTTGCTTTTTCACGATTCCTCAATAGCATTGTGCTTAAACTTTATGATGTAATTGTTGAATATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009888 GO:0010073 GO:0032501 GO:0032502 GO:0048507 GO:0048856
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8

Protein Analysis

650

Amino Acids

68.3

Weight (kDa)

5.04

Isoelectric Point (pI)

37.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 46 - 184 1.7e-06 Leucine-rich repeat region
LRR_8 PF13855 81 - 141 7.3e-08 Leucine rich repeat
LRR_8 PF13855 346 - 407 7.7e-07 Leucine rich repeat
LRR_8 PF13855 464 - 522 1.3e-06 Leucine rich repeat
LRR_14 PF23598 480 - 562 1.2e-06 Leucine-rich repeat region
LRR_4 PF12799 488 - 524 4.8e-06 Leucine Rich repeats (2 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 339
Acc16I TGCGCA 1 cut(s) 986
AccB7I CCANNNNNTGG 3 cut(s) 14, 206, 1198
AccI GTMKAC 1 cut(s) 1849
AccII CGCG 1 cut(s) 1832
AciI CCGC 3 cut(s) 1710, 1776, 1832
AclWI GGATC 1 cut(s) 125
AcoI YGGCCR 1 cut(s) 1263
AcsI RAATTY 6 cut(s) 503, 564, 742, 907, 1249, 1575
AcuI CTGAAG 2 cut(s) 384, 503
AfaI GTAC 2 cut(s) 1228, 1325
AfiI CCNNNNNNNGG 4 cut(s) 14, 206, 1198, 1816
AjnI CCWGG 2 cut(s) 134, 205
AjuI GAANNNNNNNTTGG 4 cut(s) 186, 218, 808, 840
AloI GAACNNNNNNTCC 4 cut(s) 587, 619, 1512, 1544
Alw21I GWGCWC 3 cut(s) 947, 1180, 1717
Alw26I GTCTC 3 cut(s) 517, 733, 1457
AlwI GGATC 1 cut(s) 125
AoxI GGCC 2 cut(s) 497, 1263
ApeKI GCWGC 2 cut(s) 668, 1088
ApoI RAATTY 6 cut(s) 503, 564, 742, 907, 1249, 1575
Asp700I GAANNNNTTC 1 cut(s) 1507
AspA2I CCTAGG 1 cut(s) 226
AspLEI GCGC 1 cut(s) 987
AspS9I GGNCC 5 cut(s) 197, 209, 497, 1201, 1402
AsuHPI GGTGA 3 cut(s) 1070, 1583, 1759
AvaII GGWCC 4 cut(s) 197, 209, 1201, 1402
AvrII CCTAGG 1 cut(s) 226
BalI TGGCCA 1 cut(s) 1265
BanII GRGCYC 2 cut(s) 947, 1717
BbsI GAAGAC 2 cut(s) 455, 775
Bbv12I GWGCWC 3 cut(s) 947, 1180, 1717
BbvCI CCTCAGC 1 cut(s) 733
BbvI GCAGC 2 cut(s) 655, 1100
BccI CCATC 3 cut(s) 487, 1024, 1277
BciT130I CCWGG 2 cut(s) 136, 207
BclI TGATCA 1 cut(s) 1678
BcoDI GTCTC 3 cut(s) 517, 733, 1457
BfaI CTAG 5 cut(s) 161, 227, 531, 749, 1343
BfmI CTRYAG 1 cut(s) 669
BglII AGATCT 2 cut(s) 751, 1194
BisI GCNGC 2 cut(s) 669, 1089
BlnI CCTAGG 1 cut(s) 226
BlsI GCNGC 2 cut(s) 670, 1090
BmcAI AGTACT 1 cut(s) 1325
Bme1390I CCNGG 2 cut(s) 136, 207
Bme18I GGWCC 4 cut(s) 197, 209, 1201, 1402
BmgT120I GGNCC 5 cut(s) 197, 209, 497, 1201, 1402
BmiI GGNNCC 3 cut(s) 498, 1288, 1858
BmrFI CCNGG 2 cut(s) 136, 207
BpiI GAAGAC 2 cut(s) 455, 775
BplI GAGNNNNNCTC 2 cut(s) 1704, 1736
BpmI CTGGAG 3 cut(s) 1023, 1175, 1652
Bpu10I CCTNAGC 3 cut(s) 733, 1437, 1811
BpuEI CTTGAG 1 cut(s) 265
BsaBI GATNNNNATC 1 cut(s) 1215
BsaJI CCNNGG 8 cut(s) 134, 193, 226, 691, 948, 1235, 1260, 1877
BsaWI WCCGGW 1 cut(s) 773
Bsc4I CCNNNNNNNGG 4 cut(s) 14, 206, 1198, 1816
Bse1I ACTGG 5 cut(s) 218, 382, 703, 934, 1449
Bse3DI GCAATG 3 cut(s) 974, 1098, 1705
Bse8I GATNNNNATC 1 cut(s) 1215
BseBI CCWGG 2 cut(s) 136, 207
BseDI CCNNGG 8 cut(s) 134, 193, 226, 691, 948, 1235, 1260, 1877
BseGI GGATG 4 cut(s) 188, 764, 885, 1016
BseJI GATNNNNATC 1 cut(s) 1215
BseLI CCNNNNNNNGG 4 cut(s) 14, 206, 1198, 1816
BseMI GCAATG 3 cut(s) 974, 1098, 1705
BseMII CTCAG 7 cut(s) 747, 1195, 1236, 1428, 1598, 1676, 1802
BseNI ACTGG 5 cut(s) 218, 382, 703, 934, 1449
BseRI GAGGAG 1 cut(s) 721
BseXI GCAGC 2 cut(s) 655, 1100
Bsh1236I CGCG 1 cut(s) 1832
BshFI GGCC 2 cut(s) 499, 1265
BsiHKAI GWGCWC 3 cut(s) 947, 1180, 1717
BsiSI CCGG 1 cut(s) 774
BslFI GGGAC 2 cut(s) 208, 903
BslI CCNNNNNNNGG 4 cut(s) 14, 206, 1198, 1816
BsmAI GTCTC 3 cut(s) 517, 733, 1457
BsmFI GGGAC 2 cut(s) 208, 903
BsmI GAATGC 1 cut(s) 1158
BsnI GGCC 2 cut(s) 499, 1265
Bsp1286I GDGCHC 3 cut(s) 947, 1180, 1717
Bsp143I GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
Bsp19I CCATGG 3 cut(s) 948, 1260, 1877
BspACI CCGC 3 cut(s) 1710, 1776, 1832
BspANI GGCC 2 cut(s) 499, 1265
BspCNI CTCAG 7 cut(s) 746, 1194, 1235, 1429, 1599, 1675, 1803
BspFNI CGCG 1 cut(s) 1832
BspLI GGNNCC 3 cut(s) 498, 1288, 1858
BspMAI CTGCAG 1 cut(s) 673
BspPI GGATC 1 cut(s) 125
BsrDI GCAATG 3 cut(s) 974, 1098, 1705
BsrI ACTGG 5 cut(s) 218, 382, 703, 934, 1449
BssECI CCNNGG 8 cut(s) 134, 193, 226, 691, 948, 1235, 1260, 1877
BssMI GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
BssNAI GTATAC 1 cut(s) 1850
BssT1I CCWWGG 7 cut(s) 193, 226, 691, 948, 1235, 1260, 1877
Bst1107I GTATAC 1 cut(s) 1850
Bst2UI CCWGG 2 cut(s) 136, 207
Bst4CI ACNGT 2 cut(s) 21, 1762
Bst6I CTCTTC 2 cut(s) 291, 1351
BstAPI GCANNNNNTGC 1 cut(s) 976
BstC8I GCNNGC 4 cut(s) 388, 1463, 1585, 1741
BstDSI CCRYGG 3 cut(s) 948, 1260, 1877
BstEII GGTNACC 1 cut(s) 1080
BstF5I GGATG 4 cut(s) 188, 764, 885, 1016
BstFNI CGCG 1 cut(s) 1832
BstHHI GCGC 1 cut(s) 987
BstKTI GATC 7 cut(s) 133, 175, 754, 807, 1197, 1280, 1681
BstMAI GTCTC 3 cut(s) 517, 733, 1457
BstMBI GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
BstMWI GCNNNNNNNGC 3 cut(s) 496, 976, 1695
BstNI CCWGG 2 cut(s) 136, 207
BstNSI RCATGY 1 cut(s) 1876
BstPI GGTNACC 1 cut(s) 1080
BstSCI CCNGG 2 cut(s) 134, 205
BstSFI CTRYAG 1 cut(s) 669
BstUI CGCG 1 cut(s) 1832
BstV1I GCAGC 2 cut(s) 655, 1100
BstV2I GAAGAC 2 cut(s) 455, 775
BstX2I RGATCY 2 cut(s) 751, 1194
BstXI CCANNNNNNTGG 1 cut(s) 710
BstYI RGATCY 2 cut(s) 751, 1194
BstZ17I GTATAC 1 cut(s) 1850
BsuRI GGCC 2 cut(s) 499, 1265
BtgI CCRYGG 3 cut(s) 948, 1260, 1877
BtsCI GGATG 4 cut(s) 188, 764, 885, 1016
BtsIMutI CAGTG 3 cut(s) 225, 862, 1261
Cac8I GCNNGC 4 cut(s) 388, 1463, 1585, 1741
CfoI GCGC 1 cut(s) 987
Cfr13I GGNCC 5 cut(s) 197, 209, 497, 1201, 1402
Csp6I GTAC 2 cut(s) 1227, 1324
CviAII CATG 8 cut(s) 619, 949, 1033, 1261, 1399, 1588, 1873, 1878
CviQI GTAC 2 cut(s) 1227, 1324
DpnI GATC 7 cut(s) 132, 174, 753, 806, 1196, 1279, 1680
DpnII GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
EaeI YGGCCR 1 cut(s) 1263
Eam1104I CTCTTC 2 cut(s) 291, 1351
EarI CTCTTC 2 cut(s) 291, 1351
Ecl136II GAGCTC 2 cut(s) 945, 1715
Eco130I CCWWGG 7 cut(s) 193, 226, 691, 948, 1235, 1260, 1877
Eco24I GRGCYC 2 cut(s) 947, 1717
Eco47I GGWCC 4 cut(s) 197, 209, 1201, 1402
Eco53kI GAGCTC 2 cut(s) 945, 1715
Eco57I CTGAAG 2 cut(s) 384, 503
Eco91I GGTNACC 1 cut(s) 1080
EcoICRI GAGCTC 2 cut(s) 945, 1715
EcoO109I RGGNCCY 1 cut(s) 497
EcoO65I GGTNACC 1 cut(s) 1080
EcoRII CCWGG 2 cut(s) 134, 205
EcoT14I CCWWGG 7 cut(s) 193, 226, 691, 948, 1235, 1260, 1877
EcoT38I GRGCYC 2 cut(s) 947, 1717
ErhI CCWWGG 7 cut(s) 193, 226, 691, 948, 1235, 1260, 1877
FaeI CATG 8 cut(s) 622, 952, 1036, 1264, 1402, 1591, 1876, 1881
FalI AAGNNNNNCTT 2 cut(s) 1492, 1524
FaqI GGGAC 2 cut(s) 208, 903
FatI CATG 8 cut(s) 618, 948, 1032, 1260, 1398, 1587, 1872, 1877
FbaI TGATCA 1 cut(s) 1678
FblI GTMKAC 1 cut(s) 1849
Fnu4HI GCNGC 2 cut(s) 669, 1089
FokI GGATG 4 cut(s) 195, 751, 892, 1003
FriOI GRGCYC 2 cut(s) 947, 1717
Fsp4HI GCNGC 2 cut(s) 669, 1089
FspBI CTAG 5 cut(s) 161, 227, 531, 749, 1343
FspI TGCGCA 1 cut(s) 986
GlaI GCGC 1 cut(s) 986
GluI GCNGC 2 cut(s) 669, 1089
GsuI CTGGAG 3 cut(s) 1023, 1175, 1652
HaeIII GGCC 2 cut(s) 499, 1265
HapII CCGG 1 cut(s) 774
HhaI GCGC 1 cut(s) 987
Hin1II CATG 8 cut(s) 622, 952, 1036, 1264, 1402, 1591, 1876, 1881
Hin6I GCGC 1 cut(s) 985
HinP1I GCGC 1 cut(s) 985
HincII GTYRAC 2 cut(s) 423, 688
HindII GTYRAC 2 cut(s) 423, 688
HindIII AAGCTT 2 cut(s) 388, 1145
HpaII CCGG 1 cut(s) 774
HphI GGTGA 3 cut(s) 1070, 1583, 1759
Hpy166II GTNNAC 4 cut(s) 423, 688, 1850, 1870
Hpy188I TCNGA 9 cut(s) 364, 429, 522, 556, 582, 842, 942, 1282, 1608
Hpy8I GTNNAC 4 cut(s) 423, 688, 1850, 1870
HpyAV CCTTC 5 cut(s) 344, 668, 1071, 1142, 1518
HpyCH4III ACNGT 2 cut(s) 21, 1762
HpyF10VI GCNNNNNNNGC 3 cut(s) 496, 976, 1695
Hsp92II CATG 8 cut(s) 622, 952, 1036, 1264, 1402, 1591, 1876, 1881
HspAI GCGC 1 cut(s) 985
Ksp22I TGATCA 1 cut(s) 1678
Kzo9I GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
LmnI GCTCC 5 cut(s) 950, 1671, 1712, 1720, 1881
Lsp1109I GCAGC 2 cut(s) 655, 1100
MaeI CTAG 5 cut(s) 161, 227, 531, 749, 1343
MaeIII GTNAC 5 cut(s) 1008, 1080, 1345, 1390, 1747
MalI GATC 7 cut(s) 132, 174, 753, 806, 1196, 1279, 1680
MboI GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
MboII GAAGA 7 cut(s) 278, 391, 455, 594, 775, 1368, 1512
MfeI CAATTG 2 cut(s) 638, 1532
MflI RGATCY 2 cut(s) 751, 1194
MhlI GDGCHC 3 cut(s) 947, 1180, 1717
MlsI TGGCCA 1 cut(s) 1265
MluNI TGGCCA 1 cut(s) 1265
MlyI GAGTC 4 cut(s) 418, 476, 962, 1618
MmeI TCCRAC 3 cut(s) 579, 605, 857
MnlI CCTC 9 cut(s) 240, 434, 462, 742, 974, 1023, 1035, 1148, 1913
Mox20I TGGCCA 1 cut(s) 1265
MroXI GAANNNNTTC 1 cut(s) 1507
MscI TGGCCA 1 cut(s) 1265
MseI TTAA 7 cut(s) 545, 926, 959, 1128, 1245, 1302, 1920
MslI CAYNNNNRTG 1 cut(s) 1037
Msp20I TGGCCA 1 cut(s) 1265
MspA1I CMGCKG 1 cut(s) 1776
MspI CCGG 1 cut(s) 774
MspR9I CCNGG 2 cut(s) 136, 207
MunI CAATTG 2 cut(s) 638, 1532
Mva1269I GAATGC 1 cut(s) 1158
MvaI CCWGG 2 cut(s) 136, 207
MvnI CGCG 1 cut(s) 1832
MwoI GCNNNNNNNGC 3 cut(s) 496, 976, 1695
NcoI CCATGG 3 cut(s) 948, 1260, 1877
NdeII GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
NlaIII CATG 8 cut(s) 622, 952, 1036, 1264, 1402, 1591, 1876, 1881
NlaIV GGNNCC 3 cut(s) 498, 1288, 1858
NmuCI GTSAC 2 cut(s) 1345, 1747
NsbI TGCGCA 1 cut(s) 986
NspI RCATGY 1 cut(s) 1876
PctI GAATGC 1 cut(s) 1158
PdmI GAANNNNTTC 1 cut(s) 1507
PflMI CCANNNNNTGG 3 cut(s) 14, 206, 1198
PkrI GCNGC 2 cut(s) 670, 1090
PleI GAGTC 4 cut(s) 418, 476, 961, 1617
PpsI GAGTC 4 cut(s) 418, 476, 961, 1617
PsiI TTATAA 1 cut(s) 339
Psp124BI GAGCTC 2 cut(s) 947, 1717
Psp6I CCWGG 2 cut(s) 134, 205
PspEI GGTNACC 1 cut(s) 1080
PspGI CCWGG 2 cut(s) 134, 205
PspN4I GGNNCC 3 cut(s) 498, 1288, 1858
PspPI GGNCC 5 cut(s) 197, 209, 497, 1201, 1402
PsrI GAACNNNNNNTAC 4 cut(s) 1610, 1642, 1840, 1872
PstI CTGCAG 1 cut(s) 673
PsuI RGATCY 2 cut(s) 751, 1194
RsaI GTAC 2 cut(s) 1228, 1325
RsaNI GTAC 2 cut(s) 1227, 1324
RseI CAYNNNNRTG 1 cut(s) 1037
SacI GAGCTC 2 cut(s) 947, 1717
SaqAI TTAA 7 cut(s) 545, 926, 959, 1128, 1245, 1302, 1920
SatI GCNGC 2 cut(s) 669, 1089
Sau3AI GATC 7 cut(s) 130, 172, 751, 804, 1194, 1277, 1678
Sau96I GGNCC 5 cut(s) 197, 209, 497, 1201, 1402
ScaI AGTACT 1 cut(s) 1325
SchI GAGTC 4 cut(s) 418, 476, 962, 1618
ScrFI CCNGG 2 cut(s) 136, 207
SduI GDGCHC 3 cut(s) 947, 1180, 1717
SfcI CTRYAG 1 cut(s) 669
SinI GGWCC 4 cut(s) 197, 209, 1201, 1402
SmiMI CAYNNNNRTG 1 cut(s) 1037
SmlI CTYRAG 1 cut(s) 244
SmoI CTYRAG 1 cut(s) 244
SsiI CCGC 3 cut(s) 1710, 1776, 1832
SspI AATATT 1 cut(s) 1306
SspMI CTAG 5 cut(s) 161, 227, 531, 749, 1343
SstI GAGCTC 2 cut(s) 947, 1717
StyD4I CCNGG 2 cut(s) 134, 205
StyI CCWWGG 7 cut(s) 193, 226, 691, 948, 1235, 1260, 1877
TaaI ACNGT 2 cut(s) 21, 1762
TaqI TCGA 2 cut(s) 439, 1545
TatI WGTACW 1 cut(s) 1323
Tru1I TTAA 7 cut(s) 545, 926, 959, 1128, 1245, 1302, 1920
Tru9I TTAA 7 cut(s) 545, 926, 959, 1128, 1245, 1302, 1920
TscAI CASTG 3 cut(s) 225, 862, 1261
TseFI GTSAC 2 cut(s) 1345, 1747
TseI GCWGC 2 cut(s) 668, 1088
Tsp45I GTSAC 2 cut(s) 1345, 1747
TspDTI ATGAA 9 cut(s) 333, 635, 705, 753, 816, 896, 1049, 1182, 1716
TspGWI ACGGA 1 cut(s) 1660
TspRI CASTG 3 cut(s) 225, 862, 1261
Van91I CCANNNNNTGG 3 cut(s) 14, 206, 1198
VpaK11BI GGWCC 4 cut(s) 197, 209, 1201, 1402
XapI RAATTY 6 cut(s) 503, 564, 742, 907, 1249, 1575
XceI RCATGY 1 cut(s) 1876
XmaJI CCTAGG 1 cut(s) 226
XmiI GTMKAC 1 cut(s) 1849
XmnI GAANNNNTTC 1 cut(s) 1507
XspI CTAG 5 cut(s) 161, 227, 531, 749, 1343
ZrmI AGTACT 1 cut(s) 1325
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.