Prupe.1G541000_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
44200666 .. 44201323
658 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G541000.1

Sequence Viewer

Length: 267 bp
ATGGAATCCAAATATATTGTTTGGTTTTTTTTTTTTTCCATTGCAACCTTGTTTACCATTTGCTTATGCATTGGAAATCCAAGTGCGCGATGCAAAGAAAATGAAAGACAAGCTCTTTTGGTGTTCAAGCACGATCTTGAAGATCCTTCAAATCGGCTTTTGTCCTGGGCTGGTGAAGGAGATTGTTGCAGTTGGTTTGGAGTTGTCTGCGACAATTCAACCGGTCAATTCAAAGTAATTTGTTTGAAGACGTTTGATTCTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

89

Amino Acids

10.04

Weight (kDa)

5.18

Isoelectric Point (pI)

20.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000281)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g21840 FvH4_5g27300 FvH4_7g26560 FvH4_7g26561 FvH4_7g26564 FvH4_7g26565 FvH4_7g26565 FvH4_7g26566 FvH4_7g26567 FvH4_7g26600 FvH4_7g26610
malus_domestica MD01G1000900.v1.1 MD01G1131400.v1.1 MD01G1165400.v1.1 MD01G1165600.v1.1 MD01G1172100.v1.1 MD01G1172300.v1.1 MD01G1172800.v1.1 MD01G1173000.v1.1 MD01G1174800.v1.1 MD01G1178700.v1.1 MD01G1178900.v1.1 MD01G1179300.v1.1 MD01G1179700.v1.1 MD01G1179800.v1.1 MD01G1180500.v1.1 MD04G1020400.v1.1 MD06G1026600.v1.1 MD08G1144300.v1.1 MD08G1144400.v1.1 MD08G1237900.v1.1 MD08G1238300.v1.1 MD08G1238900.v1.1 MD08G1239000.v1.1 MD08G1239100.v1.1 MD08G1239200.v1.1 MD11G1217100.v1.1 MD15G1414600.v1.1 MD15G1414700.v1.1 MD15G1414900.v1.1 MD15G1415000.v1.1 MD15G1426700.v1.1 MD15G1427000.v1.1 MD15G1429700.v1.1 MD15G1429800.v1.1 MD15G1430200.v1.1 MD15G1430300.v1.1 MD15G1439600.v1.1
prunus_persica Prupe.1G055200_v2.0.a1 Prupe.1G526400_v2.0.a1 Prupe.1G541000_v2.0.a1 Prupe.1G575100_v2.0.a1 Prupe.1G575200_v2.0.a1 Prupe.1G575300_v2.0.a1 Prupe.1G575500_v2.0.a1 Prupe.2G270000_v2.0.a1 Prupe.2G270200_v2.0.a1 Prupe.3G019500_v2.0.a1 Prupe.3G019600_v2.0.a1 Prupe.3G021800_v2.0.a1 Prupe.3G029200_v2.0.a1 Prupe.3G055300_v2.0.a1 Prupe.3G064900_v2.0.a1 Prupe.6G311600_v2.0.a1
pyrus_communis pycom01g18380 pycom01g18440 pycom01g18460 pycom01g18480 pycom01g18930 pycom01g18940 pycom01g18960 pycom01g18990 pycom01g19030 pycom01g19050 pycom01g19070 pycom08g20740 pycom08g20750 pycom11g19100 pycom12g20310 pycom14g10700 pycom15g10840 pycom15g37770 pycom15g37830 pycom15g37860 pycom15g38010 pycom15g38040 pycom15g38750 pycom420g00350 pycom420g00400 pycom420g00410 pycom420g00510 pycom420g00540 pycom976g00210
rosa_chinensis RchiOBHm_Chr1g0373231 RchiOBHm_Chr1g0373241 RchiOBHm_Chr1g0373251
rosa_laevigata RLG00000026834 RLG00000026835 RLG00000026836 RLG00000026837 RLG00000026839 RLG00000026840 RLG00000026841
rosa_multiflora Rmu_co8123616.1_g000001 Rmu_sc0000170.1_g000006 Rmu_sc0000170.1_g000007 Rmu_sc0000170.1_g000009 Rmu_sc0008079.1_g000015 Rmu_sc0013594.1_g000002
rosa_roxburghii Rroxscaffold_4G00284310 Rroxscaffold_4G00284320 Rroxscaffold_4G00284350 Rroxscaffold_4G00284370
rosa_rugosa Rorug01G0376700 Rorug01G0376800
rosa_samantha Rh1BG349500 Rh1CG362800 Rh3BG125200
rosa_wichuraiana Rw0G003040 Rw0G015420 Rw1G034010 Rw1G034020 Rw1G034030 Rw1G034950 Rw1G034960 Rw1G034970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 88
AclWI GGATC 1 cut(s) 137
AgeI ACCGGT 1 cut(s) 221
AgsI TTSAA 6 cut(s) 127, 140, 150, 219, 232, 247
AjnI CCWGG 1 cut(s) 164
AluBI AGCT 1 cut(s) 113
AluI AGCT 1 cut(s) 113
AlwI GGATC 1 cut(s) 137
AsiGI ACCGGT 1 cut(s) 221
AspLEI GCGC 1 cut(s) 88
AsuHPI GGTGA 1 cut(s) 185
BbsI GAAGAC 1 cut(s) 254
BciT130I CCWGG 1 cut(s) 166
Bme1390I CCNGG 1 cut(s) 166
BmrFI CCNGG 1 cut(s) 166
BmsI GCATC 1 cut(s) 80
BpiI GAAGAC 1 cut(s) 254
BsaJI CCNNGG 1 cut(s) 165
BsaWI WCCGGW 1 cut(s) 221
Bse118I RCCGGY 1 cut(s) 221
Bse3DI GCAATG 1 cut(s) 39
BseBI CCWGG 1 cut(s) 166
BseDI CCNNGG 1 cut(s) 165
BseMI GCAATG 1 cut(s) 39
Bsh1236I CGCG 1 cut(s) 88
BshTI ACCGGT 1 cut(s) 221
BsiSI CCGG 1 cut(s) 222
Bsp143I GATC 2 cut(s) 133, 142
BspFNI CGCG 1 cut(s) 88
BspPI GGATC 1 cut(s) 137
BsrDI GCAATG 1 cut(s) 39
BsrFI RCCGGY 1 cut(s) 221
BssAI RCCGGY 1 cut(s) 221
BssECI CCNNGG 1 cut(s) 165
BssMI GATC 2 cut(s) 133, 142
Bst2UI CCWGG 1 cut(s) 166
BstFNI CGCG 1 cut(s) 88
BstHHI GCGC 1 cut(s) 88
BstKTI GATC 2 cut(s) 136, 145
BstMBI GATC 2 cut(s) 133, 142
BstNI CCWGG 1 cut(s) 166
BstSCI CCNGG 1 cut(s) 164
BstUI CGCG 1 cut(s) 88
BstV2I GAAGAC 1 cut(s) 254
BstX2I RGATCY 1 cut(s) 142
BstYI RGATCY 1 cut(s) 142
BtgZI GCGATG 1 cut(s) 103
CfoI GCGC 1 cut(s) 88
Cfr10I RCCGGY 1 cut(s) 221
CspAI ACCGGT 1 cut(s) 221
CviJI RGCY 3 cut(s) 113, 157, 170
CviKI_1 RGCY 3 cut(s) 113, 157, 170
DpnI GATC 2 cut(s) 135, 144
DpnII GATC 2 cut(s) 133, 142
EcoRII CCWGG 1 cut(s) 164
EcoT22I ATGCAT 1 cut(s) 71
FaiI YATR 2 cut(s) 15, 67
GlaI GCGC 1 cut(s) 87
HapII CCGG 1 cut(s) 222
HhaI GCGC 1 cut(s) 88
Hin6I GCGC 1 cut(s) 86
HinP1I GCGC 1 cut(s) 86
HinfI GANTC 2 cut(s) 5, 257
HpaII CCGG 1 cut(s) 222
HphI GGTGA 1 cut(s) 185
Hpy166II GTNNAC 1 cut(s) 54
Hpy188I TCNGA 1 cut(s) 266
Hpy188III TCNNGA 1 cut(s) 137
Hpy8I GTNNAC 1 cut(s) 54
HpyAV CCTTC 2 cut(s) 156, 170
HpyCH4IV ACGT 1 cut(s) 251
HpyCH4V TGCA 4 cut(s) 44, 69, 93, 189
HpySE526I ACGT 1 cut(s) 251
HspAI GCGC 1 cut(s) 86
Kzo9I GATC 2 cut(s) 133, 142
LpnPI CCDG 4 cut(s) 151, 156, 178, 235
LweI GCATC 1 cut(s) 80
MaeII ACGT 1 cut(s) 251
MalI GATC 2 cut(s) 135, 144
MboI GATC 2 cut(s) 133, 142
MboII GAAGA 2 cut(s) 152, 259
MflI RGATCY 1 cut(s) 142
MluCI AATT 3 cut(s) 214, 227, 237
Mph1103I ATGCAT 1 cut(s) 71
MspI CCGG 1 cut(s) 222
MspR9I CCNGG 1 cut(s) 166
MvaI CCWGG 1 cut(s) 166
MvnI CGCG 1 cut(s) 88
NdeII GATC 2 cut(s) 133, 142
NsiI ATGCAT 1 cut(s) 71
PfeI GAWTC 2 cut(s) 5, 257
PinAI ACCGGT 1 cut(s) 221
Psp6I CCWGG 1 cut(s) 164
PspGI CCWGG 1 cut(s) 164
PsuI RGATCY 1 cut(s) 142
Sau3AI GATC 2 cut(s) 133, 142
ScrFI CCNGG 1 cut(s) 166
SetI ASST 3 cut(s) 50, 115, 254
SfaNI GCATC 1 cut(s) 80
Sse9I AATT 3 cut(s) 214, 227, 237
StyD4I CCNGG 1 cut(s) 164
TaiI ACGT 1 cut(s) 254
TasI AATT 3 cut(s) 214, 227, 237
TfiI GAWTC 2 cut(s) 5, 257
TspDTI ATGAA 1 cut(s) 117
Zsp2I ATGCAT 1 cut(s) 71
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.