mitotic sister chromatid biorientation
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 474 |
| AccBSI | CCGCTC | 2 cut(s) | 100, 303 |
| AccI | GTMKAC | 1 cut(s) | 582 |
| AclWI | GGATC | 2 cut(s) | 397, 410 |
| AcoI | YGGCCR | 4 cut(s) | 95, 179, 513, 621 |
| AcsI | RAATTY | 1 cut(s) | 837 |
| AcuI | CTGAAG | 1 cut(s) | 185 |
| AcyI | GRCGYC | 2 cut(s) | 519, 588 |
| AfaI | GTAC | 2 cut(s) | 553, 793 |
| AgsI | TTSAA | 5 cut(s) | 47, 61, 487, 742, 765 |
| AjiI | CACGTC | 1 cut(s) | 254 |
| AjnI | CCWGG | 2 cut(s) | 119, 161 |
| AluBI | AGCT | 2 cut(s) | 417, 507 |
| AluI | AGCT | 2 cut(s) | 417, 507 |
| Alw21I | GWGCWC | 1 cut(s) | 509 |
| Alw26I | GTCTC | 2 cut(s) | 595, 814 |
| AlwI | GGATC | 2 cut(s) | 397, 410 |
| Ama87I | CYCGRG | 3 cut(s) | 106, 612, 653 |
| AoxI | GGCC | 9 cut(s) | 40, 95, 159, 179, 269, 493, 513, 621, 916 |
| ApaI | GGGCCC | 1 cut(s) | 920 |
| ApeKI | GCWGC | 3 cut(s) | 264, 563, 857 |
| ApoI | RAATTY | 1 cut(s) | 837 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 230, 262 |
| AsuC2I | CCSGG | 8 cut(s) | 107, 108, 183, 523, 613, 614, 698, 920 |
| AsuHPI | GGTGA | 1 cut(s) | 308 |
| AvaI | CYCGRG | 3 cut(s) | 106, 612, 653 |
| AvaII | GGWCC | 5 cut(s) | 329, 476, 644, 668, 922 |
| BaeGI | GKGCMC | 1 cut(s) | 920 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 242, 275 |
| BamHI | GGATCC | 1 cut(s) | 402 |
| BanII | GRGCYC | 3 cut(s) | 113, 509, 920 |
| BauI | CACGAG | 2 cut(s) | 395, 893 |
| Bbv12I | GWGCWC | 1 cut(s) | 509 |
| BbvI | GCAGC | 3 cut(s) | 251, 550, 844 |
| BccI | CCATC | 3 cut(s) | 216, 327, 725 |
| BceAI | ACGGC | 4 cut(s) | 110, 194, 570, 601 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 230, 264, 323, 357 |
| BciT130I | CCWGG | 2 cut(s) | 121, 163 |
| BcnI | CCSGG | 8 cut(s) | 107, 108, 183, 523, 613, 614, 698, 920 |
| BcoDI | GTCTC | 2 cut(s) | 595, 814 |
| BfaI | CTAG | 1 cut(s) | 224 |
| BfoI | RGCGCY | 3 cut(s) | 169, 208, 892 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 178, 554 |
| BglII | AGATCT | 1 cut(s) | 82 |
| Bme18I | GGWCC | 5 cut(s) | 329, 476, 644, 668, 922 |
| BmeT110I | CYCGRG | 3 cut(s) | 106, 612, 653 |
| BmgBI | CACGTC | 1 cut(s) | 254 |
| BmiI | GGNNCC | 6 cut(s) | 25, 160, 330, 331, 404, 918 |
| BmsI | GCATC | 1 cut(s) | 713 |
| Bpu10I | CCTNAGC | 1 cut(s) | 304 |
| BpuMI | CCSGG | 8 cut(s) | 107, 108, 183, 523, 613, 614, 698, 920 |
| BsaHI | GRCGYC | 2 cut(s) | 519, 588 |
| BsaI | GGTCTC | 1 cut(s) | 814 |
| BsaJI | CCNNGG | 7 cut(s) | 106, 119, 472, 594, 612, 697, 828 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 84, 114, 575, 605 |
| Bse118I | RCCGGY | 2 cut(s) | 548, 670 |
| Bse1I | ACTGG | 1 cut(s) | 410 |
| BseBI | CCWGG | 2 cut(s) | 121, 163 |
| BseDI | CCNNGG | 7 cut(s) | 106, 119, 472, 594, 612, 697, 828 |
| BseGI | GGATG | 3 cut(s) | 208, 689, 717 |
| BseMII | CTCAG | 2 cut(s) | 318, 376 |
| BseNI | ACTGG | 1 cut(s) | 410 |
| BsePI | GCGCGC | 4 cut(s) | 195, 528, 557, 559 |
| BseSI | GKGCMC | 1 cut(s) | 920 |
| BseX3I | CGGCCG | 2 cut(s) | 95, 179 |
| BseXI | GCAGC | 3 cut(s) | 251, 550, 844 |
| BsgI | GTGCAG | 1 cut(s) | 71 |
| Bsh1285I | CGRYCG | 8 cut(s) | 98, 136, 182, 381, 577, 663, 682, 697 |
| BshFI | GGCC | 9 cut(s) | 42, 97, 161, 181, 271, 495, 515, 623, 918 |
| BsiEI | CGRYCG | 8 cut(s) | 98, 136, 182, 381, 577, 663, 682, 697 |
| BsiHKAI | GWGCWC | 1 cut(s) | 509 |
| BsiHKCI | CYCGRG | 3 cut(s) | 106, 612, 653 |
| BsiSI | CCGG | 8 cut(s) | 107, 182, 522, 549, 613, 671, 697, 920 |
| BslFI | GGGAC | 1 cut(s) | 315 |
| BsmAI | GTCTC | 2 cut(s) | 595, 814 |
| BsmBI | CGTCTC | 1 cut(s) | 595 |
| BsmFI | GGGAC | 1 cut(s) | 315 |
| BsmI | GAATGC | 1 cut(s) | 860 |
| BsnI | GGCC | 9 cut(s) | 42, 97, 161, 181, 271, 495, 515, 623, 918 |
| Bso31I | GGTCTC | 1 cut(s) | 814 |
| BsoBI | CYCGRG | 3 cut(s) | 106, 612, 653 |
| Bsp120I | GGGCCC | 1 cut(s) | 916 |
| Bsp1286I | GDGCHC | 3 cut(s) | 113, 509, 920 |
| Bsp143I | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| BspANI | GGCC | 9 cut(s) | 42, 97, 161, 181, 271, 495, 515, 623, 918 |
| BspCNI | CTCAG | 2 cut(s) | 317, 375 |
| BspLI | GGNNCC | 6 cut(s) | 25, 160, 330, 331, 404, 918 |
| BspPI | GGATC | 2 cut(s) | 397, 410 |
| BspTNI | GGTCTC | 1 cut(s) | 814 |
| BsrBI | CCGCTC | 2 cut(s) | 100, 303 |
| BsrFI | RCCGGY | 2 cut(s) | 548, 670 |
| BsrI | ACTGG | 1 cut(s) | 410 |
| BssAI | RCCGGY | 2 cut(s) | 548, 670 |
| BssECI | CCNNGG | 7 cut(s) | 106, 119, 472, 594, 612, 697, 828 |
| BssHII | GCGCGC | 4 cut(s) | 195, 528, 557, 559 |
| BssMI | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| BssNI | GRCGYC | 2 cut(s) | 519, 588 |
| BssSI | CACGAG | 2 cut(s) | 395, 893 |
| BssT1I | CCWWGG | 2 cut(s) | 472, 828 |
| Bst2BI | CACGAG | 2 cut(s) | 395, 893 |
| Bst2UI | CCWGG | 2 cut(s) | 121, 163 |
| Bst4CI | ACNGT | 1 cut(s) | 683 |
| Bst6I | CTCTTC | 1 cut(s) | 41 |
| BstACI | GRCGYC | 2 cut(s) | 519, 588 |
| BstDEI | CTNAG | 2 cut(s) | 304, 362 |
| BstDSI | CCRYGG | 1 cut(s) | 594 |
| BstF5I | GGATG | 3 cut(s) | 208, 689, 717 |
| BstH2I | RGCGCY | 3 cut(s) | 169, 208, 892 |
| BstKTI | GATC | 6 cut(s) | 85, 371, 405, 442, 577, 663 |
| BstMAI | GTCTC | 2 cut(s) | 595, 814 |
| BstMBI | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| BstMCI | CGRYCG | 8 cut(s) | 98, 136, 182, 381, 577, 663, 682, 697 |
| BstNI | CCWGG | 2 cut(s) | 121, 163 |
| BstNSI | RCATGY | 2 cut(s) | 344, 464 |
| BstSLI | GKGCMC | 1 cut(s) | 920 |
| BstV1I | GCAGC | 3 cut(s) | 251, 550, 844 |
| BstX2I | RGATCY | 2 cut(s) | 82, 402 |
| BstYI | RGATCY | 2 cut(s) | 82, 402 |
| BstZI | CGGCCG | 2 cut(s) | 95, 179 |
| BsuRI | GGCC | 9 cut(s) | 42, 97, 161, 181, 271, 495, 515, 623, 918 |
| BtgI | CCRYGG | 1 cut(s) | 594 |
| BtgZI | GCGATG | 1 cut(s) | 690 |
| BtrI | CACGTC | 1 cut(s) | 254 |
| BtsCI | GGATG | 3 cut(s) | 208, 689, 717 |
| Cfr10I | RCCGGY | 2 cut(s) | 548, 670 |
| Cfr42I | CCGCGG | 1 cut(s) | 597 |
| Cfr9I | CCCGGG | 2 cut(s) | 106, 612 |
| CpoI | CGGWCCG | 2 cut(s) | 668, 922 |
| CseI | GACGC | 4 cut(s) | 527, 568, 577, 628 |
| Csp6I | GTAC | 2 cut(s) | 552, 792 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 378, 413 |
| CspI | CGGWCCG | 2 cut(s) | 668, 922 |
| CviAII | CATG | 3 cut(s) | 20, 341, 461 |
| CviQI | GTAC | 2 cut(s) | 552, 792 |
| DdeI | CTNAG | 2 cut(s) | 304, 362 |
| DpnI | GATC | 6 cut(s) | 84, 370, 404, 441, 576, 662 |
| DpnII | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 474 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 474 |
| EaeI | YGGCCR | 4 cut(s) | 95, 179, 513, 621 |
| EagI | CGGCCG | 2 cut(s) | 95, 179 |
| Eam1104I | CTCTTC | 1 cut(s) | 41 |
| EarI | CTCTTC | 1 cut(s) | 41 |
| EciI | GGCGGA | 3 cut(s) | 92, 681, 914 |
| Ecl136II | GAGCTC | 1 cut(s) | 507 |
| EclXI | CGGCCG | 2 cut(s) | 95, 179 |
| Eco130I | CCWWGG | 2 cut(s) | 472, 828 |
| Eco24I | GRGCYC | 3 cut(s) | 113, 509, 920 |
| Eco31I | GGTCTC | 1 cut(s) | 814 |
| Eco47I | GGWCC | 5 cut(s) | 329, 476, 644, 668, 922 |
| Eco52I | CGGCCG | 2 cut(s) | 95, 179 |
| Eco53kI | GAGCTC | 1 cut(s) | 507 |
| Eco57I | CTGAAG | 1 cut(s) | 185 |
| Eco88I | CYCGRG | 3 cut(s) | 106, 612, 653 |
| EcoICRI | GAGCTC | 1 cut(s) | 507 |
| EcoO109I | RGGNCCY | 2 cut(s) | 159, 329 |
| EcoRII | CCWGG | 2 cut(s) | 119, 161 |
| EcoT14I | CCWWGG | 2 cut(s) | 472, 828 |
| EcoT38I | GRGCYC | 3 cut(s) | 113, 509, 920 |
| ErhI | CCWWGG | 2 cut(s) | 472, 828 |
| Esp3I | CGTCTC | 1 cut(s) | 595 |
| FaeI | CATG | 3 cut(s) | 23, 344, 464 |
| FaiI | YATR | 5 cut(s) | 21, 311, 342, 462, 602 |
| FaqI | GGGAC | 1 cut(s) | 315 |
| FatI | CATG | 3 cut(s) | 19, 340, 460 |
| FauI | CCCGC | 4 cut(s) | 260, 308, 414, 589 |
| FblI | GTMKAC | 1 cut(s) | 582 |
| FokI | GGATG | 3 cut(s) | 195, 676, 704 |
| FriOI | GRGCYC | 3 cut(s) | 113, 509, 920 |
| FspBI | CTAG | 1 cut(s) | 224 |
| HaeII | RGCGCY | 3 cut(s) | 169, 208, 892 |
| HaeIII | GGCC | 9 cut(s) | 42, 97, 161, 181, 271, 495, 515, 623, 918 |
| HapII | CCGG | 8 cut(s) | 107, 182, 522, 549, 613, 671, 697, 920 |
| HgaI | GACGC | 4 cut(s) | 527, 568, 577, 628 |
| Hin1I | GRCGYC | 2 cut(s) | 519, 588 |
| Hin1II | CATG | 3 cut(s) | 23, 344, 464 |
| HincII | GTYRAC | 2 cut(s) | 450, 583 |
| HindII | GTYRAC | 2 cut(s) | 450, 583 |
| HinfI | GANTC | 5 cut(s) | 230, 451, 468, 754, 877 |
| HpaII | CCGG | 8 cut(s) | 107, 182, 522, 549, 613, 671, 697, 920 |
| HphI | GGTGA | 1 cut(s) | 308 |
| Hpy166II | GTNNAC | 6 cut(s) | 17, 316, 450, 583, 647, 910 |
| Hpy188I | TCNGA | 3 cut(s) | 365, 467, 694 |
| Hpy188III | TCNNGA | 3 cut(s) | 332, 487, 731 |
| Hpy8I | GTNNAC | 6 cut(s) | 17, 316, 450, 583, 647, 910 |
| Hpy99I | CGWCG | 6 cut(s) | 96, 180, 521, 584, 587, 644 |
| HpyAV | CCTTC | 2 cut(s) | 53, 368 |
| HpyCH4III | ACNGT | 1 cut(s) | 683 |
| HpyCH4IV | ACGT | 1 cut(s) | 253 |
| HpyCH4V | TGCA | 5 cut(s) | 6, 88, 251, 389, 860 |
| HpyF3I | CTNAG | 2 cut(s) | 304, 362 |
| HpySE526I | ACGT | 1 cut(s) | 253 |
| Hsp92I | GRCGYC | 2 cut(s) | 519, 588 |
| Hsp92II | CATG | 3 cut(s) | 23, 344, 464 |
| KflI | GGGWCCC | 1 cut(s) | 329 |
| KspI | CCGCGG | 1 cut(s) | 597 |
| Kzo9I | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| LmnI | GCTCC | 3 cut(s) | 105, 504, 525 |
| Lsp1109I | GCAGC | 3 cut(s) | 251, 550, 844 |
| LweI | GCATC | 1 cut(s) | 713 |
| MaeI | CTAG | 1 cut(s) | 224 |
| MaeII | ACGT | 1 cut(s) | 253 |
| MalI | GATC | 6 cut(s) | 84, 370, 404, 441, 576, 662 |
| MbiI | CCGCTC | 2 cut(s) | 100, 303 |
| MboI | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| MboII | GAAGA | 2 cut(s) | 28, 378 |
| MflI | RGATCY | 2 cut(s) | 82, 402 |
| MhlI | GDGCHC | 3 cut(s) | 113, 509, 920 |
| MluCI | AATT | 2 cut(s) | 736, 837 |
| MlyI | GAGTC | 4 cut(s) | 445, 462, 748, 871 |
| MmeI | TCCRAC | 1 cut(s) | 717 |
| MnlI | CCTC | 9 cut(s) | 44, 155, 282, 297, 404, 578, 738, 795, 902 |
| MspA1I | CMGCKG | 2 cut(s) | 596, 930 |
| MspI | CCGG | 8 cut(s) | 107, 182, 522, 549, 613, 671, 697, 920 |
| Mva1269I | GAATGC | 1 cut(s) | 860 |
| MvaI | CCWGG | 2 cut(s) | 121, 163 |
| NciI | CCSGG | 8 cut(s) | 107, 108, 183, 523, 613, 614, 698, 920 |
| NdeII | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| NlaIII | CATG | 3 cut(s) | 23, 344, 464 |
| NlaIV | GGNNCC | 6 cut(s) | 25, 160, 330, 331, 404, 918 |
| NspI | RCATGY | 2 cut(s) | 344, 464 |
| PaeI | GCATGC | 1 cut(s) | 344 |
| PauI | GCGCGC | 4 cut(s) | 195, 528, 557, 559 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 250, 579 |
| PctI | GAATGC | 1 cut(s) | 860 |
| PfeI | GAWTC | 1 cut(s) | 230 |
| PflFI | GACNNNGTC | 1 cut(s) | 587 |
| Ple19I | CGATCG | 2 cut(s) | 577, 663 |
| PleI | GAGTC | 4 cut(s) | 445, 462, 748, 871 |
| PpsI | GAGTC | 4 cut(s) | 445, 462, 748, 871 |
| PpuMI | RGGWCCY | 1 cut(s) | 329 |
| Psp124BI | GAGCTC | 1 cut(s) | 509 |
| Psp5II | RGGWCCY | 1 cut(s) | 329 |
| Psp6I | CCWGG | 2 cut(s) | 119, 161 |
| PspGI | CCWGG | 2 cut(s) | 119, 161 |
| PspN4I | GGNNCC | 6 cut(s) | 25, 160, 330, 331, 404, 918 |
| PspOMI | GGGCCC | 1 cut(s) | 916 |
| PspPPI | RGGWCCY | 1 cut(s) | 329 |
| PsuI | RGATCY | 2 cut(s) | 82, 402 |
| PsyI | GACNNNGTC | 1 cut(s) | 587 |
| PteI | GCGCGC | 4 cut(s) | 195, 528, 557, 559 |
| PvuI | CGATCG | 2 cut(s) | 577, 663 |
| RsaI | GTAC | 2 cut(s) | 553, 793 |
| RsaNI | GTAC | 2 cut(s) | 552, 792 |
| Rsr2I | CGGWCCG | 2 cut(s) | 668, 922 |
| RsrII | CGGWCCG | 2 cut(s) | 668, 922 |
| SacI | GAGCTC | 1 cut(s) | 509 |
| SacII | CCGCGG | 1 cut(s) | 597 |
| SalI | GTCGAC | 1 cut(s) | 581 |
| Sau3AI | GATC | 6 cut(s) | 82, 368, 402, 439, 574, 660 |
| SchI | GAGTC | 4 cut(s) | 445, 462, 748, 871 |
| SduI | GDGCHC | 3 cut(s) | 113, 509, 920 |
| SetI | ASST | 8 cut(s) | 29, 125, 193, 256, 377, 419, 509, 909 |
| SfaNI | GCATC | 1 cut(s) | 713 |
| Sfr303I | CCGCGG | 1 cut(s) | 597 |
| SgrBI | CCGCGG | 1 cut(s) | 597 |
| SgrDI | CGTCGACG | 1 cut(s) | 581 |
| SinI | GGWCC | 5 cut(s) | 329, 476, 644, 668, 922 |
| SmaI | CCCGGG | 2 cut(s) | 108, 614 |
| SphI | GCATGC | 1 cut(s) | 344 |
| SrfI | GCCCGGGC | 2 cut(s) | 108, 614 |
| Sse9I | AATT | 2 cut(s) | 736, 837 |
| SspI | AATATT | 1 cut(s) | 64 |
| SspMI | CTAG | 1 cut(s) | 224 |
| SstI | GAGCTC | 1 cut(s) | 509 |
| StyI | CCWWGG | 2 cut(s) | 472, 828 |
| TaaI | ACNGT | 1 cut(s) | 683 |
| TaiI | ACGT | 1 cut(s) | 256 |
| TaqI | TCGA | 3 cut(s) | 352, 582, 678 |
| TaqII | GACCGA | 3 cut(s) | 367, 632, 796 |
| TasI | AATT | 2 cut(s) | 736, 837 |
| TauI | GCSGC | 7 cut(s) | 100, 132, 141, 626, 629, 632, 930 |
| TfiI | GAWTC | 1 cut(s) | 230 |
| TseI | GCWGC | 3 cut(s) | 264, 563, 857 |
| TspDTI | ATGAA | 1 cut(s) | 765 |
| TspGWI | ACGGA | 1 cut(s) | 468 |
| TspMI | CCCGGG | 2 cut(s) | 106, 612 |
| Tth111I | GACNNNGTC | 1 cut(s) | 587 |
| VpaK11BI | GGWCC | 5 cut(s) | 329, 476, 644, 668, 922 |
| XapI | RAATTY | 1 cut(s) | 837 |
| XceI | RCATGY | 2 cut(s) | 344, 464 |
| XmaI | CCCGGG | 2 cut(s) | 106, 612 |
| XmiI | GTMKAC | 1 cut(s) | 582 |
| XspI | CTAG | 1 cut(s) | 224 |