Rroxscaffold_25G00450200

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000025
OG0000098
Physical Location & Seq
Reverse (-)
36676 .. 37432
757 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_25G00450200.1

Sequence Viewer

Length: 669 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGCTATCCCCGTGTCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCCGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGAATTTTAACCCGATTCCCTTTTCGAAGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

222

Amino Acids

23.77

Weight (kDa)

11.94

Isoelectric Point (pI)

86.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 556
AccB7I CCANNNNNTGG 1 cut(s) 468
AccBSI CCGCTC 1 cut(s) 189
AccI GTMKAC 1 cut(s) 115
AccII CGCG 5 cut(s) 179, 444, 632, 634, 641
AccIII TCCGGA 1 cut(s) 404
AclI AACGTT 1 cut(s) 570
AclWI GGATC 3 cut(s) 34, 288, 301
AcoI YGGCCR 2 cut(s) 169, 483
AcsI RAATTY 1 cut(s) 601
AcyI GRCGYC 1 cut(s) 553
AfaI GTAC 2 cut(s) 102, 376
AfiI CCNNNNNNNGG 8 cut(s) 83, 167, 171, 178, 468, 481, 503, 592
AgsI TTSAA 2 cut(s) 124, 414
AjiI CACGTC 2 cut(s) 448, 589
AluBI AGCT 2 cut(s) 72, 207
AluI AGCT 2 cut(s) 72, 207
Alw21I GWGCWC 1 cut(s) 458
Alw26I GTCTC 3 cut(s) 349, 560, 630
AlwI GGATC 3 cut(s) 34, 288, 301
AlwNI CAGNNNCTG 1 cut(s) 468
Ama87I CYCGRG 4 cut(s) 129, 208, 282, 537
Aor13HI TCCGGA 1 cut(s) 404
AoxI GGCC 4 cut(s) 169, 417, 483, 541
ApeKI GCWGC 3 cut(s) 58, 204, 267
ApoI RAATTY 1 cut(s) 601
AspLEI GCGC 3 cut(s) 430, 634, 643
AspS9I GGNCC 6 cut(s) 240, 246, 399, 417, 471, 542
AsuC2I CCSGG 6 cut(s) 130, 131, 168, 244, 424, 593
AsuHPI GGTGA 2 cut(s) 210, 339
AsuII TTCGAA 1 cut(s) 623
AvaI CYCGRG 4 cut(s) 129, 208, 282, 537
AvaII GGWCC 4 cut(s) 240, 246, 399, 471
BaeGI GKGCMC 1 cut(s) 258
BamHI GGATCC 1 cut(s) 293
Bbv12I GWGCWC 1 cut(s) 458
BbvI GCAGC 3 cut(s) 45, 216, 279
BceAI ACGGC 2 cut(s) 475, 560
BcnI CCSGG 6 cut(s) 130, 131, 168, 244, 424, 593
BcoDI GTCTC 3 cut(s) 349, 560, 630
BglI GCCNNNNNGGC 1 cut(s) 425
BisI GCNGC 7 cut(s) 59, 180, 196, 205, 268, 420, 466
BlsI GCNGC 7 cut(s) 60, 181, 197, 206, 269, 421, 467
Bme1390I CCNGG 6 cut(s) 130, 131, 168, 244, 424, 593
Bme18I GGWCC 4 cut(s) 240, 246, 399, 471
BmeT110I CYCGRG 4 cut(s) 129, 208, 282, 537
BmgBI CACGTC 2 cut(s) 448, 589
BmgT120I GGNCC 6 cut(s) 240, 246, 399, 417, 471, 542
BmiI GGNNCC 6 cut(s) 241, 247, 248, 295, 473, 544
BmrFI CCNGG 6 cut(s) 130, 131, 168, 244, 424, 593
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 1 cut(s) 352
BmuI ACTGGG 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 623
BpuMI CCSGG 6 cut(s) 130, 131, 168, 244, 424, 593
BsaHI GRCGYC 1 cut(s) 553
BsaI GGTCTC 1 cut(s) 349
BsaJI CCNNGG 6 cut(s) 129, 166, 283, 350, 423, 538
BsaWI WCCGGW 2 cut(s) 404, 432
BsaXI ACNNNNNCTCC 2 cut(s) 463, 493
Bsc4I CCNNNNNNNGG 8 cut(s) 83, 167, 171, 178, 468, 481, 503, 592
Bse118I RCCGGY 2 cut(s) 171, 380
Bse1I ACTGG 3 cut(s) 104, 156, 497
BseAI TCCGGA 1 cut(s) 404
BseDI CCNNGG 6 cut(s) 129, 166, 283, 350, 423, 538
BseLI CCNNNNNNNGG 8 cut(s) 83, 167, 171, 178, 468, 481, 503, 592
BseNI ACTGG 3 cut(s) 104, 156, 497
BseSI GKGCMC 1 cut(s) 258
BseX3I CGGCCG 2 cut(s) 169, 483
BseXI GCAGC 3 cut(s) 45, 216, 279
BseYI CCCAGC 1 cut(s) 257
Bsh1236I CGCG 5 cut(s) 179, 444, 632, 634, 641
Bsh1285I CGRYCG 4 cut(s) 119, 172, 381, 486
BshFI GGCC 4 cut(s) 171, 419, 485, 543
BsiEI CGRYCG 4 cut(s) 119, 172, 381, 486
BsiHKAI GWGCWC 1 cut(s) 458
BsiHKCI CYCGRG 4 cut(s) 129, 208, 282, 537
BslFI GGGAC 4 cut(s) 148, 253, 259, 575
BslI CCNNNNNNNGG 8 cut(s) 83, 167, 171, 178, 468, 481, 503, 592
BsmAI GTCTC 3 cut(s) 349, 560, 630
BsmBI CGTCTC 2 cut(s) 560, 630
BsmFI GGGAC 4 cut(s) 148, 253, 259, 575
BsnI GGCC 4 cut(s) 171, 419, 485, 543
Bso31I GGTCTC 1 cut(s) 349
BsoBI CYCGRG 4 cut(s) 129, 208, 282, 537
Bsp119I TTCGAA 1 cut(s) 623
Bsp1286I GDGCHC 2 cut(s) 258, 458
Bsp13I TCCGGA 1 cut(s) 404
Bsp143I GATC 2 cut(s) 26, 293
BspANI GGCC 4 cut(s) 171, 419, 485, 543
BspEI TCCGGA 1 cut(s) 404
BspFNI CGCG 5 cut(s) 179, 444, 632, 634, 641
BspLI GGNNCC 6 cut(s) 241, 247, 248, 295, 473, 544
BspPI GGATC 3 cut(s) 34, 288, 301
BspQI GCTCTTC 2 cut(s) 4, 463
BspT104I TTCGAA 1 cut(s) 623
BspTNI GGTCTC 1 cut(s) 349
BsrBI CCGCTC 1 cut(s) 189
BsrFI RCCGGY 2 cut(s) 171, 380
BsrI ACTGG 3 cut(s) 104, 156, 497
BssAI RCCGGY 2 cut(s) 171, 380
BssECI CCNNGG 6 cut(s) 129, 166, 283, 350, 423, 538
BssMI GATC 2 cut(s) 26, 293
BssNI GRCGYC 1 cut(s) 553
BssT1I CCWWGG 1 cut(s) 350
Bst4CI ACNGT 1 cut(s) 120
Bst6I CTCTTC 3 cut(s) 4, 463, 538
BstACI GRCGYC 1 cut(s) 553
BstBI TTCGAA 1 cut(s) 623
BstC8I GCNNGC 5 cut(s) 70, 173, 177, 340, 509
BstDEI CTNAG 1 cut(s) 666
BstEII GGTNACC 1 cut(s) 654
BstFNI CGCG 5 cut(s) 179, 444, 632, 634, 641
BstHHI GCGC 3 cut(s) 430, 634, 643
BstKTI GATC 2 cut(s) 29, 296
BstMAI GTCTC 3 cut(s) 349, 560, 630
BstMBI GATC 2 cut(s) 26, 293
BstMCI CGRYCG 4 cut(s) 119, 172, 381, 486
BstPI GGTNACC 1 cut(s) 654
BstSCI CCNGG 6 cut(s) 128, 129, 166, 242, 422, 591
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 5 cut(s) 179, 444, 632, 634, 641
BstV1I GCAGC 3 cut(s) 45, 216, 279
BstX2I RGATCY 1 cut(s) 293
BstYI RGATCY 1 cut(s) 293
BstZI CGGCCG 2 cut(s) 169, 483
BsuRI GGCC 4 cut(s) 171, 419, 485, 543
BtrI CACGTC 2 cut(s) 448, 589
BtsIMutI CAGTG 1 cut(s) 504
Cac8I GCNNGC 5 cut(s) 70, 173, 177, 340, 509
CaiI CAGNNNCTG 1 cut(s) 468
CfoI GCGC 3 cut(s) 430, 634, 643
Cfr10I RCCGGY 2 cut(s) 171, 380
Cfr13I GGNCC 6 cut(s) 240, 246, 399, 417, 471, 542
Cfr9I CCCGGG 1 cut(s) 129
CseI GACGC 1 cut(s) 647
Csp6I GTAC 2 cut(s) 101, 375
CviQI GTAC 2 cut(s) 101, 375
DdeI CTNAG 1 cut(s) 666
DpnI GATC 2 cut(s) 28, 295
DpnII GATC 2 cut(s) 26, 293
EaeI YGGCCR 2 cut(s) 169, 483
EagI CGGCCG 2 cut(s) 169, 483
Eam1104I CTCTTC 3 cut(s) 4, 463, 538
EarI CTCTTC 3 cut(s) 4, 463, 538
EclXI CGGCCG 2 cut(s) 169, 483
Eco130I CCWWGG 1 cut(s) 350
Eco31I GGTCTC 1 cut(s) 349
Eco47I GGWCC 4 cut(s) 240, 246, 399, 471
Eco52I CGGCCG 2 cut(s) 169, 483
Eco88I CYCGRG 4 cut(s) 129, 208, 282, 537
Eco91I GGTNACC 1 cut(s) 654
EcoO109I RGGNCCY 2 cut(s) 246, 542
EcoO65I GGTNACC 1 cut(s) 654
EcoT14I CCWWGG 1 cut(s) 350
ErhI CCWWGG 1 cut(s) 350
Esp3I CGTCTC 2 cut(s) 560, 630
FaiI YATR 2 cut(s) 47, 371
FaqI GGGAC 4 cut(s) 148, 253, 259, 575
FauI CCCGC 3 cut(s) 194, 554, 667
FblI GTMKAC 1 cut(s) 115
Fnu4HI GCNGC 7 cut(s) 59, 180, 196, 205, 268, 420, 466
Fsp4HI GCNGC 7 cut(s) 59, 180, 196, 205, 268, 420, 466
GlaI GCGC 3 cut(s) 429, 633, 642
GluI GCNGC 7 cut(s) 59, 180, 196, 205, 268, 420, 466
GsaI CCCAGC 1 cut(s) 261
HaeIII GGCC 4 cut(s) 171, 419, 485, 543
HgaI GACGC 1 cut(s) 647
HhaI GCGC 3 cut(s) 430, 634, 643
Hin1I GRCGYC 1 cut(s) 553
Hin6I GCGC 3 cut(s) 428, 632, 641
HinP1I GCGC 3 cut(s) 428, 632, 641
HincII GTYRAC 2 cut(s) 116, 580
HindII GTYRAC 2 cut(s) 116, 580
HinfI GANTC 4 cut(s) 87, 112, 561, 613
HphI GGTGA 2 cut(s) 210, 339
Hpy166II GTNNAC 4 cut(s) 116, 218, 347, 580
Hpy188I TCNGA 4 cut(s) 86, 111, 560, 600
Hpy188III TCNNGA 4 cut(s) 238, 282, 405, 537
Hpy8I GTNNAC 4 cut(s) 116, 218, 347, 580
Hpy99I CGWCG 5 cut(s) 44, 233, 449, 555, 652
HpyAV CCTTC 2 cut(s) 17, 138
HpyCH4III ACNGT 1 cut(s) 120
HpyCH4IV ACGT 5 cut(s) 39, 447, 553, 570, 588
HpyF3I CTNAG 1 cut(s) 666
HpySE526I ACGT 5 cut(s) 39, 447, 553, 570, 588
Hsp92I GRCGYC 1 cut(s) 553
HspAI GCGC 3 cut(s) 428, 632, 641
KflI GGGWCCC 1 cut(s) 246
Kpn2I TCCGGA 1 cut(s) 404
KroI GCCGGC 1 cut(s) 171
KroNI GCCGGC 1 cut(s) 173
Kzo9I GATC 2 cut(s) 26, 293
LguI GCTCTTC 2 cut(s) 4, 463
LmnI GCTCC 1 cut(s) 147
Lsp1109I GCAGC 3 cut(s) 45, 216, 279
LweI GCATC 1 cut(s) 352
MaeII ACGT 5 cut(s) 39, 447, 553, 570, 588
MaeIII GTNAC 2 cut(s) 287, 654
MalI GATC 2 cut(s) 28, 295
MbiI CCGCTC 1 cut(s) 189
MboI GATC 2 cut(s) 26, 293
MboII GAAGA 3 cut(s) 21, 450, 525
MflI RGATCY 1 cut(s) 293
MhlI GDGCHC 2 cut(s) 258, 458
MluCI AATT 1 cut(s) 601
MlyI GAGTC 2 cut(s) 121, 555
MmeI TCCRAC 2 cut(s) 64, 583
MnlI CCTC 5 cut(s) 273, 278, 412, 489, 533
MroI TCCGGA 1 cut(s) 404
MroNI GCCGGC 1 cut(s) 171
MseI TTAA 2 cut(s) 515, 606
MspA1I CMGCKG 1 cut(s) 468
MspR9I CCNGG 6 cut(s) 130, 131, 168, 244, 424, 593
MvnI CGCG 5 cut(s) 179, 444, 632, 634, 641
NaeI GCCGGC 1 cut(s) 173
NciI CCSGG 6 cut(s) 130, 131, 168, 244, 424, 593
NdeII GATC 2 cut(s) 26, 293
NgoMIV GCCGGC 1 cut(s) 171
NlaIV GGNNCC 6 cut(s) 241, 247, 248, 295, 473, 544
NmeAIII GCCGAG 1 cut(s) 511
NspV TTCGAA 1 cut(s) 623
PaeR7I CTCGAG 1 cut(s) 208
PciSI GCTCTTC 2 cut(s) 4, 463
PdiI GCCGGC 1 cut(s) 173
PfeI GAWTC 2 cut(s) 87, 613
PflMI CCANNNNNTGG 1 cut(s) 468
PkrI GCNGC 7 cut(s) 60, 181, 197, 206, 269, 421, 467
PleI GAGTC 2 cut(s) 120, 555
PpsI GAGTC 2 cut(s) 120, 555
PpuMI RGGWCCY 1 cut(s) 246
Psp1406I AACGTT 1 cut(s) 570
Psp5II RGGWCCY 1 cut(s) 246
PspEI GGTNACC 1 cut(s) 654
PspFI CCCAGC 1 cut(s) 257
PspN4I GGNNCC 6 cut(s) 241, 247, 248, 295, 473, 544
PspPI GGNCC 6 cut(s) 240, 246, 399, 417, 471, 542
PspPPI RGGWCCY 1 cut(s) 246
PspXI VCTCGAGB 1 cut(s) 208
PstNI CAGNNNCTG 1 cut(s) 468
PsuI RGATCY 1 cut(s) 293
RsaI GTAC 2 cut(s) 102, 376
RsaNI GTAC 2 cut(s) 101, 375
SalI GTCGAC 1 cut(s) 114
SapI GCTCTTC 2 cut(s) 4, 463
SaqAI TTAA 2 cut(s) 515, 606
SatI GCNGC 7 cut(s) 59, 180, 196, 205, 268, 420, 466
Sau3AI GATC 2 cut(s) 26, 293
Sau96I GGNCC 6 cut(s) 240, 246, 399, 417, 471, 542
SchI GAGTC 2 cut(s) 121, 555
ScrFI CCNGG 6 cut(s) 130, 131, 168, 244, 424, 593
SduI GDGCHC 2 cut(s) 258, 458
SfaNI GCATC 1 cut(s) 352
Sfr274I CTCGAG 1 cut(s) 208
SfuI TTCGAA 1 cut(s) 623
SinI GGWCC 4 cut(s) 240, 246, 399, 471
SlaI CTCGAG 1 cut(s) 208
SmaI CCCGGG 1 cut(s) 131
SmlI CTYRAG 1 cut(s) 208
SmoI CTYRAG 1 cut(s) 208
Sse9I AATT 1 cut(s) 601
StyD4I CCNGG 6 cut(s) 128, 129, 166, 242, 422, 591
StyI CCWWGG 1 cut(s) 350
TaaI ACNGT 1 cut(s) 120
TaiI ACGT 5 cut(s) 42, 450, 556, 573, 591
TaqI TCGA 5 cut(s) 21, 115, 209, 623, 647
TaqII GACCGA 1 cut(s) 387
TasI AATT 1 cut(s) 601
TauI GCSGC 4 cut(s) 182, 198, 422, 468
TfiI GAWTC 2 cut(s) 87, 613
Tru1I TTAA 2 cut(s) 515, 606
Tru9I TTAA 2 cut(s) 515, 606
TscAI CASTG 1 cut(s) 504
TseI GCWGC 3 cut(s) 58, 204, 267
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 3 cut(s) 88, 150, 306
TspMI CCCGGG 1 cut(s) 129
TspRI CASTG 1 cut(s) 504
Van91I CCANNNNNTGG 1 cut(s) 468
VpaK11BI GGWCC 4 cut(s) 240, 246, 399, 471
XapI RAATTY 1 cut(s) 601
XhoI CTCGAG 1 cut(s) 208
XmaI CCCGGG 1 cut(s) 129
XmiI GTMKAC 1 cut(s) 115
ZraI GACGTC 1 cut(s) 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.