Rroxscaffold_48G00448450

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000048
OG0000098
Physical Location & Seq
Forward (+)
10006 .. 11359
1354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_48G00448450.1

Sequence Viewer

Length: 846 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTATCCCCGTGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACGTATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGGTGGGCAGGCTGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTTCGAAGTTCGCGCGAGACGCGCTATCGACGGGTTACCCGCCTCTTAGGATCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

281

Amino Acids

30.21

Weight (kDa)

10.48

Isoelectric Point (pI)

69.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 123
AatII GACGTC 1 cut(s) 723
Acc36I ACCTGC 1 cut(s) 123
AccBSI CCGCTC 1 cut(s) 357
AccI GTMKAC 1 cut(s) 284
AccII CGCG 6 cut(s) 347, 366, 612, 800, 802, 809
AccIII TCCGGA 1 cut(s) 572
AclI AACGTT 1 cut(s) 737
AclWI GGATC 5 cut(s) 34, 189, 456, 469, 845
AcoI YGGCCR 2 cut(s) 337, 651
AcsI RAATTY 1 cut(s) 769
AcyI GRCGYC 1 cut(s) 720
AfaI GTAC 2 cut(s) 271, 544
AgsI TTSAA 2 cut(s) 293, 582
AjiI CACGTC 2 cut(s) 616, 756
AluBI AGCT 2 cut(s) 100, 375
AluI AGCT 2 cut(s) 100, 375
Alw21I GWGCWC 2 cut(s) 102, 626
Alw26I GTCTC 3 cut(s) 517, 727, 798
AlwI GGATC 5 cut(s) 34, 189, 456, 469, 845
Ama87I CYCGRG 4 cut(s) 298, 376, 450, 704
Aor13HI TCCGGA 1 cut(s) 572
AoxI GGCC 4 cut(s) 337, 585, 651, 708
ApeKI GCWGC 3 cut(s) 58, 372, 435
ApoI RAATTY 1 cut(s) 769
AspLEI GCGC 3 cut(s) 598, 802, 811
AspS9I GGNCC 7 cut(s) 208, 408, 414, 567, 585, 639, 709
AsuC2I CCSGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
AsuHPI GGTGA 2 cut(s) 378, 507
AsuII TTCGAA 1 cut(s) 791
AvaI CYCGRG 4 cut(s) 298, 376, 450, 704
AvaII GGWCC 5 cut(s) 208, 408, 414, 567, 639
BaeGI GKGCMC 2 cut(s) 230, 426
BamHI GGATCC 1 cut(s) 461
BanII GRGCYC 1 cut(s) 102
BbsI GAAGAC 1 cut(s) 163
Bbv12I GWGCWC 2 cut(s) 102, 626
BbvI GCAGC 3 cut(s) 45, 384, 447
BceAI ACGGC 2 cut(s) 643, 727
BcnI CCSGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
BcoDI GTCTC 3 cut(s) 517, 727, 798
BfuAI ACCTGC 1 cut(s) 123
BglI GCCNNNNNGGC 1 cut(s) 593
BisI GCNGC 9 cut(s) 59, 69, 140, 348, 364, 373, 436, 588, 634
BlsI GCNGC 9 cut(s) 60, 70, 141, 349, 365, 374, 437, 589, 635
Bme1390I CCNGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
Bme18I GGWCC 5 cut(s) 208, 408, 414, 567, 639
BmeT110I CYCGRG 4 cut(s) 298, 376, 450, 704
BmgBI CACGTC 2 cut(s) 616, 756
BmgT120I GGNCC 7 cut(s) 208, 408, 414, 567, 585, 639, 709
BmiI GGNNCC 7 cut(s) 209, 409, 415, 416, 463, 641, 711
BmrFI CCNGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
BmsI GCATC 1 cut(s) 520
BpiI GAAGAC 1 cut(s) 163
Bpu14I TTCGAA 1 cut(s) 791
BpuMI CCSGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
BsaHI GRCGYC 1 cut(s) 720
BsaI GGTCTC 1 cut(s) 517
BsaJI CCNNGG 7 cut(s) 298, 334, 364, 451, 518, 591, 705
BsaWI WCCGGW 2 cut(s) 572, 600
BsaXI ACNNNNNCTCC 2 cut(s) 631, 661
Bse118I RCCGGY 2 cut(s) 339, 548
Bse1I ACTGG 2 cut(s) 273, 665
BseAI TCCGGA 1 cut(s) 572
BseDI CCNNGG 7 cut(s) 298, 334, 364, 451, 518, 591, 705
BseNI ACTGG 2 cut(s) 273, 665
BseSI GKGCMC 2 cut(s) 230, 426
BseX3I CGGCCG 2 cut(s) 337, 651
BseXI GCAGC 3 cut(s) 45, 384, 447
BseYI CCCAGC 2 cut(s) 144, 425
Bsh1236I CGCG 6 cut(s) 347, 366, 612, 800, 802, 809
Bsh1285I CGRYCG 4 cut(s) 288, 340, 549, 654
BshFI GGCC 4 cut(s) 339, 587, 653, 710
BsiEI CGRYCG 4 cut(s) 288, 340, 549, 654
BsiHKAI GWGCWC 2 cut(s) 102, 626
BsiHKCI CYCGRG 4 cut(s) 298, 376, 450, 704
BslFI GGGAC 4 cut(s) 316, 421, 427, 742
BsmAI GTCTC 3 cut(s) 517, 727, 798
BsmBI CGTCTC 2 cut(s) 727, 798
BsmFI GGGAC 4 cut(s) 316, 421, 427, 742
BsnI GGCC 4 cut(s) 339, 587, 653, 710
Bso31I GGTCTC 1 cut(s) 517
BsoBI CYCGRG 4 cut(s) 298, 376, 450, 704
Bsp119I TTCGAA 1 cut(s) 791
Bsp1286I GDGCHC 4 cut(s) 102, 230, 426, 626
Bsp13I TCCGGA 1 cut(s) 572
Bsp143I GATC 4 cut(s) 26, 181, 461, 837
BspANI GGCC 4 cut(s) 339, 587, 653, 710
BspEI TCCGGA 1 cut(s) 572
BspFNI CGCG 6 cut(s) 347, 366, 612, 800, 802, 809
BspLI GGNNCC 7 cut(s) 209, 409, 415, 416, 463, 641, 711
BspMI ACCTGC 1 cut(s) 123
BspPI GGATC 5 cut(s) 34, 189, 456, 469, 845
BspQI GCTCTTC 2 cut(s) 4, 631
BspT104I TTCGAA 1 cut(s) 791
BspTNI GGTCTC 1 cut(s) 517
BsrBI CCGCTC 1 cut(s) 357
BsrFI RCCGGY 2 cut(s) 339, 548
BsrI ACTGG 2 cut(s) 273, 665
BssAI RCCGGY 2 cut(s) 339, 548
BssECI CCNNGG 7 cut(s) 298, 334, 364, 451, 518, 591, 705
BssMI GATC 4 cut(s) 26, 181, 461, 837
BssNI GRCGYC 1 cut(s) 720
BssT1I CCWWGG 1 cut(s) 518
Bst4CI ACNGT 1 cut(s) 289
Bst6I CTCTTC 3 cut(s) 4, 631, 705
BstACI GRCGYC 1 cut(s) 720
BstBI TTCGAA 1 cut(s) 791
BstC8I GCNNGC 5 cut(s) 189, 341, 345, 508, 677
BstDEI CTNAG 2 cut(s) 106, 833
BstDSI CCRYGG 1 cut(s) 364
BstEII GGTNACC 1 cut(s) 821
BstFNI CGCG 6 cut(s) 347, 366, 612, 800, 802, 809
BstHHI GCGC 3 cut(s) 598, 802, 811
BstKTI GATC 4 cut(s) 29, 184, 464, 840
BstMAI GTCTC 3 cut(s) 517, 727, 798
BstMBI GATC 4 cut(s) 26, 181, 461, 837
BstMCI CGRYCG 4 cut(s) 288, 340, 549, 654
BstPI GGTNACC 1 cut(s) 821
BstSCI CCNGG 7 cut(s) 177, 297, 298, 334, 410, 590, 758
BstSLI GKGCMC 2 cut(s) 230, 426
BstUI CGCG 6 cut(s) 347, 366, 612, 800, 802, 809
BstV1I GCAGC 3 cut(s) 45, 384, 447
BstV2I GAAGAC 1 cut(s) 163
BstX2I RGATCY 1 cut(s) 461
BstYI RGATCY 1 cut(s) 461
BstZI CGGCCG 2 cut(s) 337, 651
BsuRI GGCC 4 cut(s) 339, 587, 653, 710
BtgI CCRYGG 1 cut(s) 364
BtrI CACGTC 2 cut(s) 616, 756
BtsI GCAGTG 2 cut(s) 204, 230
BtsIMutI CAGTG 3 cut(s) 204, 230, 672
BveI ACCTGC 1 cut(s) 123
Cac8I GCNNGC 5 cut(s) 189, 341, 345, 508, 677
CfoI GCGC 3 cut(s) 598, 802, 811
Cfr10I RCCGGY 2 cut(s) 339, 548
Cfr13I GGNCC 7 cut(s) 208, 408, 414, 567, 585, 639, 709
Cfr42I CCGCGG 1 cut(s) 367
Cfr9I CCCGGG 1 cut(s) 298
CseI GACGC 1 cut(s) 815
Csp6I GTAC 2 cut(s) 270, 543
CviQI GTAC 2 cut(s) 270, 543
DdeI CTNAG 2 cut(s) 106, 833
DpnI GATC 4 cut(s) 28, 183, 463, 839
DpnII GATC 4 cut(s) 26, 181, 461, 837
EaeI YGGCCR 2 cut(s) 337, 651
EagI CGGCCG 2 cut(s) 337, 651
Eam1104I CTCTTC 3 cut(s) 4, 631, 705
EarI CTCTTC 3 cut(s) 4, 631, 705
EciI GGCGGA 1 cut(s) 164
Ecl136II GAGCTC 1 cut(s) 100
EclXI CGGCCG 2 cut(s) 337, 651
Eco130I CCWWGG 1 cut(s) 518
Eco24I GRGCYC 1 cut(s) 102
Eco31I GGTCTC 1 cut(s) 517
Eco47I GGWCC 5 cut(s) 208, 408, 414, 567, 639
Eco52I CGGCCG 2 cut(s) 337, 651
Eco53kI GAGCTC 1 cut(s) 100
Eco88I CYCGRG 4 cut(s) 298, 376, 450, 704
Eco91I GGTNACC 1 cut(s) 821
EcoICRI GAGCTC 1 cut(s) 100
EcoO109I RGGNCCY 2 cut(s) 414, 709
EcoO65I GGTNACC 1 cut(s) 821
EcoT14I CCWWGG 1 cut(s) 518
EcoT38I GRGCYC 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 518
Esp3I CGTCTC 2 cut(s) 727, 798
FaiI YATR 3 cut(s) 47, 135, 539
FalI AAGNNNNNCTT 2 cut(s) 186, 218
FaqI GGGAC 4 cut(s) 316, 421, 427, 742
FauI CCCGC 5 cut(s) 196, 238, 362, 721, 834
FblI GTMKAC 1 cut(s) 284
Fnu4HI GCNGC 9 cut(s) 59, 69, 140, 348, 364, 373, 436, 588, 634
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 9 cut(s) 59, 69, 140, 348, 364, 373, 436, 588, 634
GlaI GCGC 3 cut(s) 597, 801, 810
GluI GCNGC 9 cut(s) 59, 69, 140, 348, 364, 373, 436, 588, 634
GsaI CCCAGC 2 cut(s) 148, 429
HaeIII GGCC 4 cut(s) 339, 587, 653, 710
HgaI GACGC 1 cut(s) 815
HhaI GCGC 3 cut(s) 598, 802, 811
Hin1I GRCGYC 1 cut(s) 720
Hin6I GCGC 3 cut(s) 596, 800, 809
HinP1I GCGC 3 cut(s) 596, 800, 809
HincII GTYRAC 2 cut(s) 285, 747
HindII GTYRAC 2 cut(s) 285, 747
HinfI GANTC 5 cut(s) 239, 256, 281, 728, 781
HphI GGTGA 2 cut(s) 378, 507
Hpy166II GTNNAC 4 cut(s) 285, 386, 515, 747
Hpy188I TCNGA 4 cut(s) 238, 255, 280, 727
Hpy188III TCNNGA 5 cut(s) 406, 450, 573, 704, 766
Hpy8I GTNNAC 4 cut(s) 285, 386, 515, 747
Hpy99I CGWCG 5 cut(s) 44, 401, 617, 722, 820
HpyAV CCTTC 2 cut(s) 17, 307
HpyCH4III ACNGT 1 cut(s) 289
HpyCH4IV ACGT 6 cut(s) 39, 131, 615, 720, 737, 755
HpyF3I CTNAG 2 cut(s) 106, 833
HpySE526I ACGT 6 cut(s) 39, 131, 615, 720, 737, 755
Hsp92I GRCGYC 1 cut(s) 720
HspAI GCGC 3 cut(s) 596, 800, 809
KflI GGGWCCC 1 cut(s) 414
Kpn2I TCCGGA 1 cut(s) 572
KroI GCCGGC 1 cut(s) 339
KroNI GCCGGC 1 cut(s) 341
KspI CCGCGG 1 cut(s) 367
Kzo9I GATC 4 cut(s) 26, 181, 461, 837
LguI GCTCTTC 2 cut(s) 4, 631
LmnI GCTCC 1 cut(s) 316
Lsp1109I GCAGC 3 cut(s) 45, 384, 447
LweI GCATC 1 cut(s) 520
MaeII ACGT 6 cut(s) 39, 131, 615, 720, 737, 755
MaeIII GTNAC 2 cut(s) 455, 821
MalI GATC 4 cut(s) 28, 183, 463, 839
MbiI CCGCTC 1 cut(s) 357
MboI GATC 4 cut(s) 26, 181, 461, 837
MboII GAAGA 4 cut(s) 21, 163, 618, 692
MflI RGATCY 1 cut(s) 461
MhlI GDGCHC 4 cut(s) 102, 230, 426, 626
MluCI AATT 1 cut(s) 769
MlyI GAGTC 2 cut(s) 290, 722
MmeI TCCRAC 1 cut(s) 750
MnlI CCTC 8 cut(s) 211, 244, 441, 446, 580, 657, 700, 840
MroI TCCGGA 1 cut(s) 572
MroNI GCCGGC 1 cut(s) 339
MseI TTAA 3 cut(s) 128, 683, 774
MspA1I CMGCKG 1 cut(s) 366
MspR9I CCNGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
MvnI CGCG 6 cut(s) 347, 366, 612, 800, 802, 809
NaeI GCCGGC 1 cut(s) 341
NciI CCSGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
NdeII GATC 4 cut(s) 26, 181, 461, 837
NgoMIV GCCGGC 1 cut(s) 339
NlaIV GGNNCC 7 cut(s) 209, 409, 415, 416, 463, 641, 711
NmeAIII GCCGAG 1 cut(s) 679
NspV TTCGAA 1 cut(s) 791
PaeR7I CTCGAG 1 cut(s) 376
PaqCI CACCTGC 1 cut(s) 123
PciSI GCTCTTC 2 cut(s) 4, 631
PdiI GCCGGC 1 cut(s) 341
PfeI GAWTC 3 cut(s) 239, 256, 781
PflFI GACNNNGTC 1 cut(s) 167
PkrI GCNGC 9 cut(s) 60, 70, 141, 349, 365, 374, 437, 589, 635
PleI GAGTC 2 cut(s) 289, 722
PpsI GAGTC 2 cut(s) 289, 722
PpuMI RGGWCCY 1 cut(s) 414
Psp124BI GAGCTC 1 cut(s) 102
Psp1406I AACGTT 1 cut(s) 737
Psp5II RGGWCCY 1 cut(s) 414
PspEI GGTNACC 1 cut(s) 821
PspFI CCCAGC 2 cut(s) 144, 425
PspN4I GGNNCC 7 cut(s) 209, 409, 415, 416, 463, 641, 711
PspPI GGNCC 7 cut(s) 208, 408, 414, 567, 585, 639, 709
PspPPI RGGWCCY 1 cut(s) 414
PspXI VCTCGAGB 1 cut(s) 376
PsuI RGATCY 1 cut(s) 461
PsyI GACNNNGTC 1 cut(s) 167
RsaI GTAC 2 cut(s) 271, 544
RsaNI GTAC 2 cut(s) 270, 543
SacI GAGCTC 1 cut(s) 102
SacII CCGCGG 1 cut(s) 367
SalI GTCGAC 1 cut(s) 283
SapI GCTCTTC 2 cut(s) 4, 631
SaqAI TTAA 3 cut(s) 128, 683, 774
SatI GCNGC 9 cut(s) 59, 69, 140, 348, 364, 373, 436, 588, 634
Sau3AI GATC 4 cut(s) 26, 181, 461, 837
Sau96I GGNCC 7 cut(s) 208, 408, 414, 567, 585, 639, 709
SchI GAGTC 2 cut(s) 290, 722
ScrFI CCNGG 7 cut(s) 179, 299, 300, 336, 412, 592, 760
SduI GDGCHC 4 cut(s) 102, 230, 426, 626
SfaNI GCATC 1 cut(s) 520
Sfr274I CTCGAG 1 cut(s) 376
Sfr303I CCGCGG 1 cut(s) 367
SfuI TTCGAA 1 cut(s) 791
SgrBI CCGCGG 1 cut(s) 367
SinI GGWCC 5 cut(s) 208, 408, 414, 567, 639
SlaI CTCGAG 1 cut(s) 376
SmaI CCCGGG 1 cut(s) 300
SmlI CTYRAG 1 cut(s) 376
SmoI CTYRAG 1 cut(s) 376
Sse9I AATT 1 cut(s) 769
SstI GAGCTC 1 cut(s) 102
StyD4I CCNGG 7 cut(s) 177, 297, 298, 334, 410, 590, 758
StyI CCWWGG 1 cut(s) 518
TaaI ACNGT 1 cut(s) 289
TaiI ACGT 6 cut(s) 42, 134, 618, 723, 740, 758
TaqI TCGA 6 cut(s) 21, 284, 377, 791, 815, 840
TaqII GACCGA 1 cut(s) 555
TasI AATT 1 cut(s) 769
TauI GCSGC 6 cut(s) 71, 142, 350, 366, 590, 636
TfiI GAWTC 3 cut(s) 239, 256, 781
Tru1I TTAA 3 cut(s) 128, 683, 774
Tru9I TTAA 3 cut(s) 128, 683, 774
TscAI CASTG 3 cut(s) 204, 230, 672
TseI GCWGC 3 cut(s) 58, 372, 435
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 257, 259, 318, 474
TspMI CCCGGG 1 cut(s) 298
TspRI CASTG 3 cut(s) 204, 230, 672
Tth111I GACNNNGTC 1 cut(s) 167
VpaK11BI GGWCC 5 cut(s) 208, 408, 414, 567, 639
XapI RAATTY 1 cut(s) 769
XhoI CTCGAG 1 cut(s) 376
XmaI CCCGGG 1 cut(s) 298
XmiI GTMKAC 1 cut(s) 284
ZraI GACGTC 1 cut(s) 721
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.