Rroxscaffold_66G00437890

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000066
OG0000098
Physical Location & Seq
Reverse (-)
256332 .. 257236
905 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_66G00437890.1

Sequence Viewer

Length: 468 bp
ATGTCTTCCGCCGGATCAGCCGCCGAAGCAGGCTTTGGGTCCAAAAGAGGGCGGTGCCCCGCCTCCGATTCACGGAATAACCCCGAAGGAGCGTTCCCGGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACGGCCGACGGGTTCGGGGCCGGGACCCCGTGCCCGGCCCTCGAGCCAATCCTTTTCCCGAGGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGGCCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCCGGACACCACGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCGGGGTGGGCGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

155

Amino Acids

17.02

Weight (kDa)

11.54

Isoelectric Point (pI)

69.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 54, 369
AccBSI CCGCTC 1 cut(s) 130
AccII CGCG 3 cut(s) 120, 139, 384
AccIII TCCGGA 1 cut(s) 345
AclWI GGATC 3 cut(s) 22, 228, 241
AcoI YGGCCR 4 cut(s) 110, 166, 318, 403
AcyI GRCGYC 1 cut(s) 370
AfaI GTAC 1 cut(s) 316
AfiI CCNNNNNNNGG 7 cut(s) 48, 72, 119, 197, 408, 421, 437
AgsI TTSAA 1 cut(s) 355
AjiI CACGTC 1 cut(s) 388
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 1 cut(s) 148
AluI AGCT 1 cut(s) 148
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 1 cut(s) 289
AlwI GGATC 3 cut(s) 22, 228, 241
AlwNI CAGNNNCTG 1 cut(s) 282
Ama87I CYCGRG 3 cut(s) 149, 204, 221
Aor13HI TCCGGA 1 cut(s) 345
AoxI GGCC 7 cut(s) 110, 166, 181, 199, 318, 358, 403
ApeKI GCWGC 1 cut(s) 145
AspLEI GCGC 1 cut(s) 372
AspS9I GGNCC 8 cut(s) 39, 100, 181, 187, 200, 340, 358, 411
AsuC2I CCSGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
AsuHPI GGTGA 2 cut(s) 151, 279
AvaI CYCGRG 3 cut(s) 149, 204, 221
AvaII GGWCC 5 cut(s) 39, 100, 187, 340, 411
BaeGI GKGCMC 2 cut(s) 59, 198
BamHI GGATCC 1 cut(s) 233
BanI GGYRCC 2 cut(s) 54, 369
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 1 cut(s) 157
BceAI ACGGC 3 cut(s) 181, 333, 415
BcnI CCSGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
BcoDI GTCTC 1 cut(s) 289
BfoI RGCGCY 1 cut(s) 373
BisI GCNGC 7 cut(s) 21, 121, 137, 146, 361, 406, 447
BlpI GCTNAGC 1 cut(s) 426
BlsI GCNGC 7 cut(s) 22, 122, 138, 147, 362, 407, 448
Bme1390I CCNGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
Bme18I GGWCC 5 cut(s) 39, 100, 187, 340, 411
BmeT110I CYCGRG 3 cut(s) 149, 204, 221
BmgBI CACGTC 1 cut(s) 388
BmgT120I GGNCC 8 cut(s) 39, 100, 181, 187, 200, 340, 358, 411
BmiI GGNNCC 8 cut(s) 40, 56, 182, 188, 189, 235, 371, 413
BmrFI CCNGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
BmsI GCATC 1 cut(s) 292
Bpu1102I GCTNAGC 1 cut(s) 426
BpuMI CCSGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
BsaHI GRCGYC 1 cut(s) 370
BsaI GGTCTC 1 cut(s) 289
BsaJI CCNNGG 6 cut(s) 107, 137, 222, 290, 364, 437
BsaWI WCCGGW 1 cut(s) 345
BsaXI ACNNNNNCTCC 2 cut(s) 403, 433
Bsc4I CCNNNNNNNGG 7 cut(s) 48, 72, 119, 197, 408, 421, 437
Bse118I RCCGGY 1 cut(s) 112
BseAI TCCGGA 1 cut(s) 345
BseDI CCNNGG 6 cut(s) 107, 137, 222, 290, 364, 437
BseLI CCNNNNNNNGG 7 cut(s) 48, 72, 119, 197, 408, 421, 437
BseMII CTCAG 1 cut(s) 417
BseSI GKGCMC 2 cut(s) 59, 198
BseX3I CGGCCG 4 cut(s) 110, 166, 318, 403
BseXI GCAGC 1 cut(s) 157
Bsh1236I CGCG 3 cut(s) 120, 139, 384
Bsh1285I CGRYCG 4 cut(s) 113, 169, 321, 406
BshFI GGCC 7 cut(s) 112, 168, 183, 201, 320, 360, 405
BshNI GGYRCC 2 cut(s) 54, 369
BsiEI CGRYCG 4 cut(s) 113, 169, 321, 406
BsiHKAI GWGCWC 1 cut(s) 398
BsiHKCI CYCGRG 3 cut(s) 149, 204, 221
BslFI GGGAC 2 cut(s) 90, 200
BslI CCNNNNNNNGG 7 cut(s) 48, 72, 119, 197, 408, 421, 437
BsmAI GTCTC 1 cut(s) 289
BsmFI GGGAC 2 cut(s) 90, 200
BsnI GGCC 7 cut(s) 112, 168, 183, 201, 320, 360, 405
Bso31I GGTCTC 1 cut(s) 289
BsoBI CYCGRG 3 cut(s) 149, 204, 221
Bsp1286I GDGCHC 3 cut(s) 59, 198, 398
Bsp13I TCCGGA 1 cut(s) 345
Bsp143I GATC 2 cut(s) 14, 233
Bsp1720I GCTNAGC 1 cut(s) 426
BspANI GGCC 7 cut(s) 112, 168, 183, 201, 320, 360, 405
BspCNI CTCAG 1 cut(s) 418
BspEI TCCGGA 1 cut(s) 345
BspFNI CGCG 3 cut(s) 120, 139, 384
BspLI GGNNCC 8 cut(s) 40, 56, 182, 188, 189, 235, 371, 413
BspPI GGATC 3 cut(s) 22, 228, 241
BspQI GCTCTTC 1 cut(s) 403
BspT107I GGYRCC 2 cut(s) 54, 369
BspTNI GGTCTC 1 cut(s) 289
BsrBI CCGCTC 1 cut(s) 130
BsrFI RCCGGY 1 cut(s) 112
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 6 cut(s) 107, 137, 222, 290, 364, 437
BssMI GATC 2 cut(s) 14, 233
BssNI GRCGYC 1 cut(s) 370
BssT1I CCWWGG 1 cut(s) 290
Bst6I CTCTTC 1 cut(s) 403
BstACI GRCGYC 1 cut(s) 370
BstC8I GCNNGC 3 cut(s) 31, 114, 118
BstDEI CTNAG 1 cut(s) 426
BstDSI CCRYGG 1 cut(s) 137
BstFNI CGCG 3 cut(s) 120, 139, 384
BstH2I RGCGCY 1 cut(s) 373
BstHHI GCGC 1 cut(s) 372
BstKTI GATC 2 cut(s) 17, 236
BstMAI GTCTC 1 cut(s) 289
BstMBI GATC 2 cut(s) 14, 233
BstMCI CGRYCG 4 cut(s) 113, 169, 321, 406
BstMWI GCNNNNNNNGC 9 cut(s) 17, 26, 136, 142, 145, 151, 331, 369, 402
BstSCI CCNGG 7 cut(s) 96, 107, 183, 196, 320, 363, 436
BstSLI GKGCMC 2 cut(s) 59, 198
BstUI CGCG 3 cut(s) 120, 139, 384
BstV1I GCAGC 1 cut(s) 157
BstX2I RGATCY 1 cut(s) 233
BstYI RGATCY 1 cut(s) 233
BstZI CGGCCG 4 cut(s) 110, 166, 318, 403
BsuRI GGCC 7 cut(s) 112, 168, 183, 201, 320, 360, 405
BtgI CCRYGG 1 cut(s) 137
BtrI CACGTC 1 cut(s) 388
Cac8I GCNNGC 3 cut(s) 31, 114, 118
CaiI CAGNNNCTG 1 cut(s) 282
CfoI GCGC 1 cut(s) 372
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 8 cut(s) 39, 100, 181, 187, 200, 340, 358, 411
Cfr42I CCGCGG 1 cut(s) 140
CpoI CGGWCCG 1 cut(s) 100
Csp6I GTAC 1 cut(s) 315
CspI CGGWCCG 1 cut(s) 100
CviQI GTAC 1 cut(s) 315
DdeI CTNAG 1 cut(s) 426
DinI GGCGCC 1 cut(s) 371
DpnI GATC 2 cut(s) 16, 235
DpnII GATC 2 cut(s) 14, 233
EaeI YGGCCR 4 cut(s) 110, 166, 318, 403
EagI CGGCCG 4 cut(s) 110, 166, 318, 403
Eam1104I CTCTTC 1 cut(s) 403
EarI CTCTTC 1 cut(s) 403
EclXI CGGCCG 4 cut(s) 110, 166, 318, 403
Eco130I CCWWGG 1 cut(s) 290
Eco31I GGTCTC 1 cut(s) 289
Eco47I GGWCC 5 cut(s) 39, 100, 187, 340, 411
Eco52I CGGCCG 4 cut(s) 110, 166, 318, 403
Eco88I CYCGRG 3 cut(s) 149, 204, 221
EcoO109I RGGNCCY 1 cut(s) 187
EcoT14I CCWWGG 1 cut(s) 290
EgeI GGCGCC 1 cut(s) 371
EheI GGCGCC 1 cut(s) 371
ErhI CCWWGG 1 cut(s) 290
FaiI YATR 1 cut(s) 311
FaqI GGGAC 2 cut(s) 90, 200
FauI CCCGC 2 cut(s) 67, 135
Fnu4HI GCNGC 7 cut(s) 21, 121, 137, 146, 361, 406, 447
Fsp4HI GCNGC 7 cut(s) 21, 121, 137, 146, 361, 406, 447
GlaI GCGC 1 cut(s) 371
GluI GCNGC 7 cut(s) 21, 121, 137, 146, 361, 406, 447
HaeII RGCGCY 1 cut(s) 373
HaeIII GGCC 7 cut(s) 112, 168, 183, 201, 320, 360, 405
HhaI GCGC 1 cut(s) 372
Hin1I GRCGYC 1 cut(s) 370
Hin6I GCGC 1 cut(s) 370
HinP1I GCGC 1 cut(s) 370
HinfI GANTC 1 cut(s) 68
HphI GGTGA 2 cut(s) 151, 279
Hpy166II GTNNAC 2 cut(s) 159, 287
Hpy188I TCNGA 1 cut(s) 67
Hpy188III TCNNGA 2 cut(s) 221, 346
Hpy8I GTNNAC 2 cut(s) 159, 287
Hpy99I CGWCG 3 cut(s) 167, 174, 389
HpyAV CCTTC 1 cut(s) 80
HpyCH4IV ACGT 1 cut(s) 387
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 26, 136, 142, 145, 151, 331, 369, 402
HpyF3I CTNAG 1 cut(s) 426
HpySE526I ACGT 1 cut(s) 387
Hsp92I GRCGYC 1 cut(s) 370
HspAI GCGC 1 cut(s) 370
KasI GGCGCC 1 cut(s) 369
KflI GGGWCCC 1 cut(s) 187
Kpn2I TCCGGA 1 cut(s) 345
KroI GCCGGC 1 cut(s) 112
KroNI GCCGGC 1 cut(s) 114
KspI CCGCGG 1 cut(s) 140
Kzo9I GATC 2 cut(s) 14, 233
LguI GCTCTTC 1 cut(s) 403
LmnI GCTCC 1 cut(s) 89
Lsp1109I GCAGC 1 cut(s) 157
LweI GCATC 1 cut(s) 292
MaeII ACGT 1 cut(s) 387
MaeIII GTNAC 1 cut(s) 227
MalI GATC 2 cut(s) 16, 235
MbiI CCGCTC 1 cut(s) 130
MboI GATC 2 cut(s) 14, 233
MboII GAAGA 1 cut(s) 390
MflI RGATCY 1 cut(s) 233
MhlI GDGCHC 3 cut(s) 59, 198, 398
Mly113I GGCGCC 1 cut(s) 370
MnlI CCTC 7 cut(s) 41, 73, 213, 217, 272, 353, 429
MroI TCCGGA 1 cut(s) 345
MroNI GCCGGC 1 cut(s) 112
MseI TTAA 1 cut(s) 453
MspA1I CMGCKG 2 cut(s) 139, 408
MspR9I CCNGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
MvnI CGCG 3 cut(s) 120, 139, 384
MwoI GCNNNNNNNGC 9 cut(s) 17, 26, 136, 142, 145, 151, 331, 369, 402
NaeI GCCGGC 1 cut(s) 114
NarI GGCGCC 1 cut(s) 370
NciI CCSGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
NdeII GATC 2 cut(s) 14, 233
NgoMIV GCCGGC 1 cut(s) 112
NlaIV GGNNCC 8 cut(s) 40, 56, 182, 188, 189, 235, 371, 413
PaeR7I CTCGAG 2 cut(s) 149, 204
PciSI GCTCTTC 1 cut(s) 403
PdiI GCCGGC 1 cut(s) 114
PfeI GAWTC 1 cut(s) 68
PkrI GCNGC 7 cut(s) 22, 122, 138, 147, 362, 407, 448
PluTI GGCGCC 1 cut(s) 373
PpuMI RGGWCCY 1 cut(s) 187
Psp5II RGGWCCY 1 cut(s) 187
PspN4I GGNNCC 8 cut(s) 40, 56, 182, 188, 189, 235, 371, 413
PspPI GGNCC 8 cut(s) 39, 100, 181, 187, 200, 340, 358, 411
PspPPI RGGWCCY 1 cut(s) 187
PspXI VCTCGAGB 2 cut(s) 149, 204
PstNI CAGNNNCTG 1 cut(s) 282
PsuI RGATCY 1 cut(s) 233
RsaI GTAC 1 cut(s) 316
RsaNI GTAC 1 cut(s) 315
Rsr2I CGGWCCG 1 cut(s) 100
RsrII CGGWCCG 1 cut(s) 100
SacII CCGCGG 1 cut(s) 140
SapI GCTCTTC 1 cut(s) 403
SaqAI TTAA 1 cut(s) 453
SatI GCNGC 7 cut(s) 21, 121, 137, 146, 361, 406, 447
Sau3AI GATC 2 cut(s) 14, 233
Sau96I GGNCC 8 cut(s) 39, 100, 181, 187, 200, 340, 358, 411
ScrFI CCNGG 7 cut(s) 98, 109, 185, 198, 322, 365, 438
SduI GDGCHC 3 cut(s) 59, 198, 398
SetI ASST 5 cut(s) 150, 292, 301, 390, 421
SfaNI GCATC 1 cut(s) 292
SfoI GGCGCC 1 cut(s) 371
Sfr274I CTCGAG 2 cut(s) 149, 204
Sfr303I CCGCGG 1 cut(s) 140
SgrBI CCGCGG 1 cut(s) 140
SinI GGWCC 5 cut(s) 39, 100, 187, 340, 411
SlaI CTCGAG 2 cut(s) 149, 204
SmlI CTYRAG 2 cut(s) 149, 204
SmoI CTYRAG 2 cut(s) 149, 204
SspDI GGCGCC 1 cut(s) 369
StyD4I CCNGG 7 cut(s) 96, 107, 183, 196, 320, 363, 436
StyI CCWWGG 1 cut(s) 290
TaiI ACGT 1 cut(s) 390
TaqI TCGA 2 cut(s) 150, 205
TaqII GACCGA 1 cut(s) 328
TauI GCSGC 6 cut(s) 23, 123, 139, 363, 408, 449
TfiI GAWTC 1 cut(s) 68
Tru1I TTAA 1 cut(s) 453
Tru9I TTAA 1 cut(s) 453
TseI GCWGC 1 cut(s) 145
TspGWI ACGGA 3 cut(s) 88, 92, 246
VpaK11BI GGWCC 5 cut(s) 39, 100, 187, 340, 411
XhoI CTCGAG 2 cut(s) 149, 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.