Rroxscaffold_40G00447680

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000040
OG0000098
Physical Location & Seq
Forward (+)
34625 .. 35522
898 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_40G00447680.1

Sequence Viewer

Length: 708 bp
ATGTCTTCCGCCCGGATCAGCCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

235

Amino Acids

25.37

Weight (kDa)

11.16

Isoelectric Point (pI)

65.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 610
AccB7I CCANNNNNTGG 1 cut(s) 660
AccBSI CCGCTC 1 cut(s) 382
AccI GTMKAC 2 cut(s) 256, 310
AccII CGCG 3 cut(s) 372, 391, 636
AccIII TCCGGA 1 cut(s) 596
AclI AACGTT 1 cut(s) 95
AclWI GGATC 3 cut(s) 23, 480, 493
AcoI YGGCCR 2 cut(s) 362, 675
AcyI GRCGYC 1 cut(s) 611
AfaI GTAC 2 cut(s) 297, 568
AfiI CCNNNNNNNGG 8 cut(s) 51, 77, 360, 364, 371, 660, 673, 689
AgsI TTSAA 1 cut(s) 606
AjiI CACGTC 1 cut(s) 640
AjnI CCWGG 1 cut(s) 688
AjuI GAANNNNNNNTTGG 2 cut(s) 21, 53
AluBI AGCT 2 cut(s) 186, 400
AluI AGCT 2 cut(s) 186, 400
Alw21I GWGCWC 1 cut(s) 650
Alw26I GTCTC 1 cut(s) 541
AlwI GGATC 3 cut(s) 23, 480, 493
AlwNI CAGNNNCTG 2 cut(s) 534, 660
Ama87I CYCGRG 4 cut(s) 321, 401, 457, 474
Aor13HI TCCGGA 1 cut(s) 596
AoxI GGCC 2 cut(s) 362, 675
ApeKI GCWGC 1 cut(s) 397
AspLEI GCGC 2 cut(s) 613, 622
AspS9I GGNCC 4 cut(s) 42, 439, 591, 663
AsuC2I CCSGG 5 cut(s) 13, 322, 323, 361, 615
AsuHPI GGTGA 2 cut(s) 403, 531
AvaI CYCGRG 4 cut(s) 321, 401, 457, 474
AvaII GGWCC 4 cut(s) 42, 439, 591, 663
BaeGI GKGCMC 2 cut(s) 64, 451
BamHI GGATCC 1 cut(s) 485
BanI GGYRCC 1 cut(s) 610
BbsI GAAGAC 1 cut(s) 189
Bbv12I GWGCWC 1 cut(s) 650
BbvI GCAGC 1 cut(s) 409
BceAI ACGGC 1 cut(s) 667
BciT130I CCWGG 1 cut(s) 690
BcnI CCSGG 5 cut(s) 13, 322, 323, 361, 615
BcoDI GTCTC 1 cut(s) 541
BfaI CTAG 1 cut(s) 176
BfoI RGCGCY 1 cut(s) 614
BisI GCNGC 4 cut(s) 373, 389, 398, 658
BlsI GCNGC 4 cut(s) 374, 390, 399, 659
Bme1390I CCNGG 6 cut(s) 13, 322, 323, 361, 615, 690
Bme18I GGWCC 4 cut(s) 42, 439, 591, 663
BmeT110I CYCGRG 4 cut(s) 321, 401, 457, 474
BmgBI CACGTC 1 cut(s) 640
BmgT120I GGNCC 4 cut(s) 42, 439, 591, 663
BmiI GGNNCC 7 cut(s) 43, 132, 440, 441, 487, 612, 665
BmrFI CCNGG 6 cut(s) 13, 322, 323, 361, 615, 690
BmrI ACTGGG 2 cut(s) 343, 445
BmsI GCATC 1 cut(s) 544
BmuI ACTGGG 2 cut(s) 343, 445
BoxI GACNNNNGTC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 189
BplI GAGNNNNNCTC 2 cut(s) 170, 202
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 5 cut(s) 13, 322, 323, 361, 615
BsaHI GRCGYC 1 cut(s) 611
BsaI GGTCTC 1 cut(s) 541
BsaJI CCNNGG 9 cut(s) 231, 321, 322, 359, 389, 475, 542, 614, 689
BsaWI WCCGGW 2 cut(s) 596, 624
BsaXI ACNNNNNCTCC 2 cut(s) 655, 685
Bsc4I CCNNNNNNNGG 8 cut(s) 51, 77, 360, 364, 371, 660, 673, 689
Bse118I RCCGGY 2 cut(s) 364, 572
Bse1I ACTGG 3 cut(s) 299, 349, 440
BseAI TCCGGA 1 cut(s) 596
BseBI CCWGG 1 cut(s) 690
BseDI CCNNGG 9 cut(s) 231, 321, 322, 359, 389, 475, 542, 614, 689
BseLI CCNNNNNNNGG 8 cut(s) 51, 77, 360, 364, 371, 660, 673, 689
BseMII CTCAG 1 cut(s) 296
BseNI ACTGG 3 cut(s) 299, 349, 440
BseSI GKGCMC 2 cut(s) 64, 451
BseX3I CGGCCG 2 cut(s) 362, 675
BseXI GCAGC 1 cut(s) 409
BseYI CCCAGC 1 cut(s) 450
Bsh1236I CGCG 3 cut(s) 372, 391, 636
Bsh1285I CGRYCG 3 cut(s) 365, 573, 678
BshFI GGCC 2 cut(s) 364, 677
BshNI GGYRCC 1 cut(s) 610
BsiEI CGRYCG 3 cut(s) 365, 573, 678
BsiHKAI GWGCWC 1 cut(s) 650
BsiHKCI CYCGRG 4 cut(s) 321, 401, 457, 474
BsiSI CCGG 9 cut(s) 13, 322, 361, 365, 573, 597, 614, 625, 674
BslFI GGGAC 4 cut(s) 276, 341, 446, 452
BslI CCNNNNNNNGG 8 cut(s) 51, 77, 360, 364, 371, 660, 673, 689
BsmAI GTCTC 1 cut(s) 541
BsmFI GGGAC 4 cut(s) 276, 341, 446, 452
BsnI GGCC 2 cut(s) 364, 677
Bso31I GGTCTC 1 cut(s) 541
BsoBI CYCGRG 4 cut(s) 321, 401, 457, 474
Bsp1286I GDGCHC 3 cut(s) 64, 451, 650
Bsp13I TCCGGA 1 cut(s) 596
Bsp143I GATC 2 cut(s) 15, 485
BspANI GGCC 2 cut(s) 364, 677
BspCNI CTCAG 1 cut(s) 297
BspEI TCCGGA 1 cut(s) 596
BspFNI CGCG 3 cut(s) 372, 391, 636
BspLI GGNNCC 7 cut(s) 43, 132, 440, 441, 487, 612, 665
BspPI GGATC 3 cut(s) 23, 480, 493
BspQI GCTCTTC 1 cut(s) 655
BspT107I GGYRCC 1 cut(s) 610
BspTNI GGTCTC 1 cut(s) 541
BsrBI CCGCTC 1 cut(s) 382
BsrFI RCCGGY 2 cut(s) 364, 572
BsrI ACTGG 3 cut(s) 299, 349, 440
BssAI RCCGGY 2 cut(s) 364, 572
BssECI CCNNGG 9 cut(s) 231, 321, 322, 359, 389, 475, 542, 614, 689
BssMI GATC 2 cut(s) 15, 485
BssNI GRCGYC 1 cut(s) 611
BssT1I CCWWGG 2 cut(s) 231, 542
Bst2UI CCWGG 1 cut(s) 690
Bst4CI ACNGT 1 cut(s) 267
Bst6I CTCTTC 1 cut(s) 655
BstACI GRCGYC 1 cut(s) 611
BstC8I GCNNGC 4 cut(s) 34, 366, 370, 700
BstDEI CTNAG 1 cut(s) 305
BstDSI CCRYGG 1 cut(s) 389
BstFNI CGCG 3 cut(s) 372, 391, 636
BstH2I RGCGCY 1 cut(s) 614
BstHHI GCGC 2 cut(s) 613, 622
BstKTI GATC 2 cut(s) 18, 488
BstMAI GTCTC 1 cut(s) 541
BstMBI GATC 2 cut(s) 15, 485
BstMCI CGRYCG 3 cut(s) 365, 573, 678
BstMWI GCNNNNNNNGC 9 cut(s) 215, 388, 394, 397, 403, 582, 617, 619, 654
BstNI CCWGG 1 cut(s) 690
BstPAI GACNNNNGTC 1 cut(s) 178
BstSCI CCNGG 6 cut(s) 11, 320, 321, 359, 613, 688
BstSLI GKGCMC 2 cut(s) 64, 451
BstUI CGCG 3 cut(s) 372, 391, 636
BstV1I GCAGC 1 cut(s) 409
BstV2I GAAGAC 1 cut(s) 189
BstX2I RGATCY 1 cut(s) 485
BstYI RGATCY 1 cut(s) 485
BstZI CGGCCG 2 cut(s) 362, 675
BsuRI GGCC 2 cut(s) 364, 677
BtgI CCRYGG 1 cut(s) 389
BtrI CACGTC 1 cut(s) 640
BtsI GCAGTG 1 cut(s) 64
BtsIMutI CAGTG 2 cut(s) 64, 272
Cac8I GCNNGC 4 cut(s) 34, 366, 370, 700
CaiI CAGNNNCTG 2 cut(s) 534, 660
CfoI GCGC 2 cut(s) 613, 622
Cfr10I RCCGGY 2 cut(s) 364, 572
Cfr13I GGNCC 4 cut(s) 42, 439, 591, 663
Cfr42I CCGCGG 1 cut(s) 392
Cfr9I CCCGGG 1 cut(s) 321
Csp6I GTAC 2 cut(s) 296, 567
CviQI GTAC 2 cut(s) 296, 567
DdeI CTNAG 1 cut(s) 305
DinI GGCGCC 1 cut(s) 612
DpnI GATC 2 cut(s) 17, 487
DpnII GATC 2 cut(s) 15, 485
EaeI YGGCCR 2 cut(s) 362, 675
EagI CGGCCG 2 cut(s) 362, 675
Eam1104I CTCTTC 1 cut(s) 655
EarI CTCTTC 1 cut(s) 655
EclXI CGGCCG 2 cut(s) 362, 675
Eco130I CCWWGG 2 cut(s) 231, 542
Eco31I GGTCTC 1 cut(s) 541
Eco47I GGWCC 4 cut(s) 42, 439, 591, 663
Eco52I CGGCCG 2 cut(s) 362, 675
Eco88I CYCGRG 4 cut(s) 321, 401, 457, 474
EcoO109I RGGNCCY 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 688
EcoT14I CCWWGG 2 cut(s) 231, 542
EgeI GGCGCC 1 cut(s) 612
EheI GGCGCC 1 cut(s) 612
ErhI CCWWGG 2 cut(s) 231, 542
FaiI YATR 2 cut(s) 141, 563
FaqI GGGAC 4 cut(s) 276, 341, 446, 452
FauI CCCGC 4 cut(s) 31, 72, 214, 387
FblI GTMKAC 2 cut(s) 256, 310
Fnu4HI GCNGC 4 cut(s) 373, 389, 398, 658
Fsp4HI GCNGC 4 cut(s) 373, 389, 398, 658
FspBI CTAG 1 cut(s) 176
GlaI GCGC 2 cut(s) 612, 621
GluI GCNGC 4 cut(s) 373, 389, 398, 658
GsaI CCCAGC 1 cut(s) 454
HaeII RGCGCY 1 cut(s) 614
HaeIII GGCC 2 cut(s) 364, 677
HapII CCGG 9 cut(s) 13, 322, 361, 365, 573, 597, 614, 625, 674
HhaI GCGC 2 cut(s) 613, 622
Hin1I GRCGYC 1 cut(s) 611
Hin6I GCGC 2 cut(s) 611, 620
HinP1I GCGC 2 cut(s) 611, 620
HincII GTYRAC 1 cut(s) 311
HindII GTYRAC 1 cut(s) 311
HinfI GANTC 6 cut(s) 73, 179, 212, 272, 282, 307
HpaII CCGG 9 cut(s) 13, 322, 361, 365, 573, 597, 614, 625, 674
HphI GGTGA 2 cut(s) 403, 531
Hpy166II GTNNAC 4 cut(s) 257, 311, 411, 539
Hpy188I TCNGA 4 cut(s) 72, 173, 281, 306
Hpy188III TCNNGA 3 cut(s) 431, 474, 597
Hpy8I GTNNAC 4 cut(s) 257, 311, 411, 539
Hpy99I CGWCG 2 cut(s) 426, 641
HpyAV CCTTC 2 cut(s) 121, 331
HpyCH4III ACNGT 1 cut(s) 267
HpyCH4IV ACGT 2 cut(s) 95, 639
HpyF10VI GCNNNNNNNGC 9 cut(s) 215, 388, 394, 397, 403, 582, 617, 619, 654
HpyF3I CTNAG 1 cut(s) 305
HpySE526I ACGT 2 cut(s) 95, 639
Hsp92I GRCGYC 1 cut(s) 611
HspAI GCGC 2 cut(s) 611, 620
KasI GGCGCC 1 cut(s) 610
KflI GGGWCCC 1 cut(s) 439
Kpn2I TCCGGA 1 cut(s) 596
KroI GCCGGC 1 cut(s) 364
KroNI GCCGGC 1 cut(s) 366
KspI CCGCGG 1 cut(s) 392
Kzo9I GATC 2 cut(s) 15, 485
LguI GCTCTTC 1 cut(s) 655
LmnI GCTCC 2 cut(s) 136, 340
Lsp1109I GCAGC 1 cut(s) 409
LweI GCATC 1 cut(s) 544
MaeI CTAG 1 cut(s) 176
MaeII ACGT 2 cut(s) 95, 639
MaeIII GTNAC 1 cut(s) 479
MalI GATC 2 cut(s) 17, 487
MbiI CCGCTC 1 cut(s) 382
MboI GATC 2 cut(s) 15, 485
MboII GAAGA 2 cut(s) 189, 642
MflI RGATCY 1 cut(s) 485
MhlI GDGCHC 3 cut(s) 64, 451, 650
Mly113I GGCGCC 1 cut(s) 611
MlyI GAGTC 2 cut(s) 188, 316
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 8 cut(s) 45, 78, 159, 466, 470, 524, 604, 681
MroI TCCGGA 1 cut(s) 596
MroNI GCCGGC 1 cut(s) 364
MseI TTAA 2 cut(s) 98, 706
MspA1I CMGCKG 3 cut(s) 209, 391, 660
MspI CCGG 9 cut(s) 13, 322, 361, 365, 573, 597, 614, 625, 674
MspR9I CCNGG 6 cut(s) 13, 322, 323, 361, 615, 690
MvaI CCWGG 1 cut(s) 690
MvnI CGCG 3 cut(s) 372, 391, 636
MwoI GCNNNNNNNGC 9 cut(s) 215, 388, 394, 397, 403, 582, 617, 619, 654
NaeI GCCGGC 1 cut(s) 366
NarI GGCGCC 1 cut(s) 611
NciI CCSGG 5 cut(s) 13, 322, 323, 361, 615
NdeII GATC 2 cut(s) 15, 485
NgoMIV GCCGGC 1 cut(s) 364
NlaIV GGNNCC 7 cut(s) 43, 132, 440, 441, 487, 612, 665
NmeAIII GCCGAG 1 cut(s) 703
PaeR7I CTCGAG 2 cut(s) 401, 457
PciSI GCTCTTC 1 cut(s) 655
PdiI GCCGGC 1 cut(s) 366
PfeI GAWTC 4 cut(s) 73, 212, 272, 282
PflMI CCANNNNNTGG 1 cut(s) 660
PkrI GCNGC 4 cut(s) 374, 390, 399, 659
PleI GAGTC 2 cut(s) 187, 315
PluTI GGCGCC 1 cut(s) 614
PpsI GAGTC 2 cut(s) 187, 315
PpuMI RGGWCCY 1 cut(s) 439
PshAI GACNNNNGTC 1 cut(s) 178
Psp1406I AACGTT 1 cut(s) 95
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 688
PspFI CCCAGC 1 cut(s) 450
PspGI CCWGG 1 cut(s) 688
PspN4I GGNNCC 7 cut(s) 43, 132, 440, 441, 487, 612, 665
PspPI GGNCC 4 cut(s) 42, 439, 591, 663
PspPPI RGGWCCY 1 cut(s) 439
PspXI VCTCGAGB 2 cut(s) 401, 457
PstNI CAGNNNCTG 2 cut(s) 534, 660
PsuI RGATCY 1 cut(s) 485
RsaI GTAC 2 cut(s) 297, 568
RsaNI GTAC 2 cut(s) 296, 567
SacII CCGCGG 1 cut(s) 392
SalI GTCGAC 1 cut(s) 309
SapI GCTCTTC 1 cut(s) 655
SaqAI TTAA 2 cut(s) 98, 706
SatI GCNGC 4 cut(s) 373, 389, 398, 658
Sau3AI GATC 2 cut(s) 15, 485
Sau96I GGNCC 4 cut(s) 42, 439, 591, 663
SchI GAGTC 2 cut(s) 188, 316
ScrFI CCNGG 6 cut(s) 13, 322, 323, 361, 615, 690
SduI GDGCHC 3 cut(s) 64, 451, 650
SetI ASST 9 cut(s) 98, 151, 188, 402, 481, 544, 553, 642, 673
SfaNI GCATC 1 cut(s) 544
SfoI GGCGCC 1 cut(s) 612
Sfr274I CTCGAG 2 cut(s) 401, 457
Sfr303I CCGCGG 1 cut(s) 392
SgrBI CCGCGG 1 cut(s) 392
SinI GGWCC 4 cut(s) 42, 439, 591, 663
SlaI CTCGAG 2 cut(s) 401, 457
SmaI CCCGGG 1 cut(s) 323
SmlI CTYRAG 3 cut(s) 152, 401, 457
SmoI CTYRAG 3 cut(s) 152, 401, 457
SspDI GGCGCC 1 cut(s) 610
SspMI CTAG 1 cut(s) 176
StyD4I CCNGG 6 cut(s) 11, 320, 321, 359, 613, 688
StyI CCWWGG 2 cut(s) 231, 542
TaaI ACNGT 1 cut(s) 267
TaiI ACGT 2 cut(s) 98, 642
TaqI TCGA 3 cut(s) 310, 402, 458
TaqII GACCGA 1 cut(s) 579
TauI GCSGC 3 cut(s) 375, 391, 660
TfiI GAWTC 4 cut(s) 73, 212, 272, 282
Tru1I TTAA 2 cut(s) 98, 706
Tru9I TTAA 2 cut(s) 98, 706
TscAI CASTG 2 cut(s) 64, 272
TseI GCWGC 1 cut(s) 397
TspGWI ACGGA 4 cut(s) 93, 283, 343, 498
TspMI CCCGGG 1 cut(s) 321
TspRI CASTG 2 cut(s) 64, 272
Van91I CCANNNNNTGG 1 cut(s) 660
VpaK11BI GGWCC 4 cut(s) 42, 439, 591, 663
XhoI CTCGAG 2 cut(s) 401, 457
XmaI CCCGGG 1 cut(s) 321
XmiI GTMKAC 2 cut(s) 256, 310
XspI CTAG 1 cut(s) 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.