Rroxscaffold_93G00440910

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000093
OG0000098
Physical Location & Seq
Forward (+)
52692 .. 54910
2219 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_93G00440910.1

Sequence Viewer

Length: 1140 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGCTGATTCTCGCCAAGCCCGTTCCCTTGGCCGTGGTTTCGCCGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCCTCGCAGCCAATCCTTTTCCCGAGATCTGCACCGACGGCCGCTCCGCCCGGCTCACGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGACGAACGATTTGCACGTCAGCATCGCTGCGGGCCTCCACCAGAGTTTCCTCTCGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCACCCGCAAAGGGATCCCGCACATTAGCTTCCTTGCGCCTTACGGGTTTAATCACCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGCCGAATGGGGAGCCCGCAGGCCGTTACCAGGAGCACGCAGATGCCGAAGCACGCCGAGACGGCGCATGCTGCCTACCATGATCGCGTCGACGACGTCTCCACGGGCATATCAACAGCCCGGCTTTGGCCGCCGCCGCAATCCGTAACGGTCCACGCCCCGAGTCGAGTGGCGGACCGGCTTGTGACCGTTCCACATCCGACCGAGGCGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

379

Amino Acids

41.37

Weight (kDa)

11.45

Isoelectric Point (pI)

62.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 861
AatII GACGTC 1 cut(s) 978
AccBSI CCGCTC 3 cut(s) 373, 489, 691
AccI GTMKAC 3 cut(s) 256, 299, 969
AccII CGCG 5 cut(s) 363, 382, 529, 584, 966
AclI AACGTT 1 cut(s) 95
AclWI GGATC 3 cut(s) 23, 784, 797
AcoI YGGCCR 5 cut(s) 234, 353, 484, 567, 1007
AcyI GRCGYC 1 cut(s) 975
AfaI GTAC 1 cut(s) 286
AflII CTTAAG 1 cut(s) 587
AflIII ACRYGT 1 cut(s) 847
AgsI TTSAA 3 cut(s) 308, 874, 1128
AjiI CACGTC 1 cut(s) 641
AjnI CCWGG 3 cut(s) 507, 549, 908
AluBI AGCT 3 cut(s) 186, 391, 804
AluI AGCT 3 cut(s) 186, 391, 804
Alw21I GWGCWC 2 cut(s) 779, 917
Alw26I GTCTC 2 cut(s) 932, 982
Alw44I GTGCAC 1 cut(s) 775
AlwI GGATC 3 cut(s) 23, 784, 797
Ama87I CYCGRG 4 cut(s) 313, 392, 467, 1039
ApaLI GTGCAC 1 cut(s) 775
ApeKI GCWGC 5 cut(s) 388, 452, 517, 651, 950
ArsI GACNNNNNNTTYG 2 cut(s) 617, 649
AspLEI GCGC 6 cut(s) 531, 586, 594, 814, 946, 1090
AsuC2I CCSGG 7 cut(s) 13, 314, 315, 352, 428, 496, 1000
AsuHPI GGTGA 3 cut(s) 394, 696, 821
AvaI CYCGRG 4 cut(s) 313, 392, 467, 1039
AvaII GGWCC 7 cut(s) 42, 424, 430, 717, 863, 1030, 1054
BaeGI GKGCMC 3 cut(s) 64, 442, 779
BamHI GGATCC 1 cut(s) 789
BanII GRGCYC 1 cut(s) 896
BbsI GAAGAC 1 cut(s) 188
Bbv12I GWGCWC 2 cut(s) 779, 917
BbvI GCAGC 5 cut(s) 400, 464, 529, 638, 937
BccI CCATC 3 cut(s) 603, 715, 1111
BceAI ACGGC 5 cut(s) 221, 499, 582, 887, 957
BcgI CGANNNNNNTGC 4 cut(s) 617, 651, 711, 745
BciT130I CCWGG 3 cut(s) 509, 551, 910
BcnI CCSGG 7 cut(s) 13, 314, 315, 352, 428, 496, 1000
BcoDI GTCTC 2 cut(s) 932, 982
BfaI CTAG 2 cut(s) 176, 611
BfoI RGCGCY 1 cut(s) 595
BfrI CTTAAG 1 cut(s) 587
BglI GCCNNNNNGGC 2 cut(s) 566, 941
BglII AGATCT 1 cut(s) 471
Bme18I GGWCC 7 cut(s) 42, 424, 430, 717, 863, 1030, 1054
BmeT110I CYCGRG 4 cut(s) 313, 392, 467, 1039
BmgBI CACGTC 1 cut(s) 641
BmrI ACTGGG 1 cut(s) 334
BmsI GCATC 3 cut(s) 655, 912, 1099
BmuI ACTGGG 1 cut(s) 334
BoxI GACNNNNGTC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 188
BplI GAGNNNNNCTC 2 cut(s) 170, 202
Bpu10I CCTNAGC 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 137
BpuMI CCSGG 7 cut(s) 13, 314, 315, 352, 428, 496, 1000
BsaHI GRCGYC 1 cut(s) 975
BsaJI CCNNGG 9 cut(s) 231, 237, 313, 350, 380, 507, 859, 981, 1083
BsaXI ACNNNNNCTCC 4 cut(s) 473, 503, 962, 992
Bse118I RCCGGY 4 cut(s) 355, 569, 1056, 1095
Bse1I ACTGG 2 cut(s) 288, 340
BseBI CCWGG 3 cut(s) 509, 551, 910
BseDI CCNNGG 9 cut(s) 231, 237, 313, 350, 380, 507, 859, 981, 1083
BseGI GGATG 3 cut(s) 595, 1075, 1103
BseMII CTCAG 2 cut(s) 706, 764
BseNI ACTGG 2 cut(s) 288, 340
BseSI GKGCMC 3 cut(s) 64, 442, 779
BseX3I CGGCCG 3 cut(s) 353, 484, 567
BseXI GCAGC 5 cut(s) 400, 464, 529, 638, 937
BseYI CCCAGC 1 cut(s) 441
BsgI GTGCAG 1 cut(s) 460
Bsh1236I CGCG 5 cut(s) 363, 382, 529, 584, 966
Bsh1285I CGRYCG 7 cut(s) 303, 356, 487, 524, 570, 769, 1083
BsiEI CGRYCG 7 cut(s) 303, 356, 487, 524, 570, 769, 1083
BsiHKAI GWGCWC 2 cut(s) 779, 917
BsiHKCI CYCGRG 4 cut(s) 313, 392, 467, 1039
BslFI GGGAC 5 cut(s) 276, 332, 437, 443, 703
BsmAI GTCTC 2 cut(s) 932, 982
BsmBI CGTCTC 2 cut(s) 932, 982
BsmFI GGGAC 5 cut(s) 276, 332, 437, 443, 703
BsoBI CYCGRG 4 cut(s) 313, 392, 467, 1039
Bsp1286I GDGCHC 5 cut(s) 64, 442, 779, 896, 917
Bsp143I GATC 5 cut(s) 15, 471, 756, 789, 961
BspCNI CTCAG 2 cut(s) 705, 763
BspFNI CGCG 5 cut(s) 363, 382, 529, 584, 966
BspPI GGATC 3 cut(s) 23, 784, 797
BspTI CTTAAG 1 cut(s) 587
BsrBI CCGCTC 3 cut(s) 373, 489, 691
BsrFI RCCGGY 4 cut(s) 355, 569, 1056, 1095
BsrI ACTGG 2 cut(s) 288, 340
BssAI RCCGGY 4 cut(s) 355, 569, 1056, 1095
BssECI CCNNGG 9 cut(s) 231, 237, 313, 350, 380, 507, 859, 981, 1083
BssMI GATC 5 cut(s) 15, 471, 756, 789, 961
BssNI GRCGYC 1 cut(s) 975
BssT1I CCWWGG 2 cut(s) 231, 859
Bst2UI CCWGG 3 cut(s) 509, 551, 910
Bst4CI ACNGT 3 cut(s) 304, 1030, 1069
BstACI GRCGYC 1 cut(s) 975
BstAFI CTTAAG 1 cut(s) 587
BstDEI CTNAG 2 cut(s) 692, 750
BstDSI CCRYGG 3 cut(s) 237, 380, 981
BstF5I GGATG 3 cut(s) 595, 1075, 1103
BstFNI CGCG 5 cut(s) 363, 382, 529, 584, 966
BstH2I RGCGCY 1 cut(s) 595
BstHHI GCGC 6 cut(s) 531, 586, 594, 814, 946, 1090
BstKTI GATC 5 cut(s) 18, 474, 759, 792, 964
BstMAI GTCTC 2 cut(s) 932, 982
BstMBI GATC 5 cut(s) 15, 471, 756, 789, 961
BstMCI CGRYCG 7 cut(s) 303, 356, 487, 524, 570, 769, 1083
BstNI CCWGG 3 cut(s) 509, 551, 910
BstNSI RCATGY 3 cut(s) 732, 851, 950
BstPAI GACNNNNGTC 1 cut(s) 178
BstSLI GKGCMC 3 cut(s) 64, 442, 779
BstUI CGCG 5 cut(s) 363, 382, 529, 584, 966
BstV1I GCAGC 5 cut(s) 400, 464, 529, 638, 937
BstV2I GAAGAC 1 cut(s) 188
BstX2I RGATCY 2 cut(s) 471, 789
BstYI RGATCY 2 cut(s) 471, 789
BstZI CGGCCG 3 cut(s) 353, 484, 567
BtgI CCRYGG 3 cut(s) 237, 380, 981
BtgZI GCGATG 2 cut(s) 632, 1076
BtrI CACGTC 1 cut(s) 641
BtsCI GGATG 3 cut(s) 595, 1075, 1103
BtsI GCAGTG 2 cut(s) 38, 64
BtsIMutI CAGTG 2 cut(s) 38, 64
CfoI GCGC 6 cut(s) 531, 586, 594, 814, 946, 1090
Cfr10I RCCGGY 4 cut(s) 355, 569, 1056, 1095
Cfr42I CCGCGG 1 cut(s) 383
Cfr9I CCCGGG 1 cut(s) 313
CpoI CGGWCCG 1 cut(s) 1054
CseI GACGC 1 cut(s) 955
Csp6I GTAC 1 cut(s) 285
CspI CGGWCCG 1 cut(s) 1054
CviAII CATG 4 cut(s) 729, 848, 947, 959
CviQI GTAC 1 cut(s) 285
DdeI CTNAG 2 cut(s) 692, 750
DpnI GATC 5 cut(s) 17, 473, 758, 791, 963
DpnII GATC 5 cut(s) 15, 471, 756, 789, 961
DrdI GACNNNNNNGTC 1 cut(s) 861
DseDI GACNNNNNNGTC 1 cut(s) 861
EaeI YGGCCR 5 cut(s) 234, 353, 484, 567, 1007
EagI CGGCCG 3 cut(s) 353, 484, 567
EciI GGCGGA 2 cut(s) 481, 1067
EclXI CGGCCG 3 cut(s) 353, 484, 567
Eco130I CCWWGG 2 cut(s) 231, 859
Eco24I GRGCYC 1 cut(s) 896
Eco47I GGWCC 7 cut(s) 42, 424, 430, 717, 863, 1030, 1054
Eco52I CGGCCG 3 cut(s) 353, 484, 567
Eco88I CYCGRG 4 cut(s) 313, 392, 467, 1039
EcoO109I RGGNCCY 3 cut(s) 430, 547, 717
EcoRII CCWGG 3 cut(s) 507, 549, 908
EcoT14I CCWWGG 2 cut(s) 231, 859
EcoT38I GRGCYC 1 cut(s) 896
ErhI CCWWGG 2 cut(s) 231, 859
Esp3I CGTCTC 2 cut(s) 932, 982
FaeI CATG 4 cut(s) 732, 851, 950, 962
FaiI YATR 8 cut(s) 141, 575, 699, 730, 849, 948, 960, 989
FalI AAGNNNNNCTT 2 cut(s) 20, 52
FaqI GGGAC 5 cut(s) 276, 332, 437, 443, 703
FatI CATG 4 cut(s) 728, 847, 946, 958
FauI CCCGC 9 cut(s) 30, 72, 213, 378, 647, 696, 788, 801, 903
FblI GTMKAC 3 cut(s) 256, 299, 969
FokI GGATG 3 cut(s) 582, 1062, 1090
FriOI GRGCYC 1 cut(s) 896
FspBI CTAG 2 cut(s) 176, 611
GlaI GCGC 6 cut(s) 530, 585, 593, 813, 945, 1089
GsaI CCCAGC 1 cut(s) 445
HaeII RGCGCY 1 cut(s) 595
HgaI GACGC 1 cut(s) 955
HhaI GCGC 6 cut(s) 531, 586, 594, 814, 946, 1090
Hin1I GRCGYC 1 cut(s) 975
Hin1II CATG 4 cut(s) 732, 851, 950, 962
Hin6I GCGC 6 cut(s) 529, 584, 592, 812, 944, 1088
HinP1I GCGC 6 cut(s) 529, 584, 592, 812, 944, 1088
HincII GTYRAC 3 cut(s) 300, 837, 970
HindII GTYRAC 3 cut(s) 300, 837, 970
HinfI GANTC 9 cut(s) 73, 179, 211, 271, 296, 617, 838, 855, 1042
HphI GGTGA 3 cut(s) 394, 696, 821
Hpy166II GTNNAC 8 cut(s) 257, 300, 402, 704, 777, 837, 970, 1033
Hpy188I TCNGA 7 cut(s) 72, 173, 270, 295, 753, 854, 1080
Hpy188III TCNNGA 5 cut(s) 422, 467, 720, 874, 1117
Hpy8I GTNNAC 8 cut(s) 257, 300, 402, 704, 777, 837, 970, 1033
Hpy99I CGWCG 6 cut(s) 417, 485, 568, 971, 974, 977
HpyAV CCTTC 3 cut(s) 121, 322, 756
HpyCH4III ACNGT 3 cut(s) 304, 1030, 1069
HpyCH4IV ACGT 3 cut(s) 95, 640, 975
HpyCH4V TGCA 4 cut(s) 477, 517, 638, 777
HpyF3I CTNAG 2 cut(s) 692, 750
HpySE526I ACGT 3 cut(s) 95, 640, 975
Hsp92I GRCGYC 1 cut(s) 975
Hsp92II CATG 4 cut(s) 732, 851, 950, 962
HspAI GCGC 6 cut(s) 529, 584, 592, 812, 944, 1088
KflI GGGWCCC 2 cut(s) 430, 717
KroI GCCGGC 2 cut(s) 355, 1095
KroNI GCCGGC 2 cut(s) 357, 1097
KspI CCGCGG 1 cut(s) 383
Kzo9I GATC 5 cut(s) 15, 471, 756, 789, 961
LmnI GCTCC 5 cut(s) 136, 331, 494, 891, 912
Lsp1109I GCAGC 5 cut(s) 400, 464, 529, 638, 937
LweI GCATC 3 cut(s) 655, 912, 1099
MaeI CTAG 2 cut(s) 176, 611
MaeII ACGT 3 cut(s) 95, 640, 975
MaeIII GTNAC 4 cut(s) 578, 904, 1024, 1063
MalI GATC 5 cut(s) 17, 473, 758, 791, 963
MbiI CCGCTC 3 cut(s) 373, 489, 691
MboI GATC 5 cut(s) 15, 471, 756, 789, 961
MboII GAAGA 2 cut(s) 188, 766
MflI RGATCY 2 cut(s) 471, 789
MhlI GDGCHC 5 cut(s) 64, 442, 779, 896, 917
MluCI AATT 1 cut(s) 1122
MlyI GAGTC 5 cut(s) 188, 305, 832, 849, 1051
MmeI TCCRAC 2 cut(s) 151, 1103
MnlI CCTC 9 cut(s) 45, 78, 159, 458, 543, 669, 684, 1078, 1124
MroNI GCCGGC 2 cut(s) 355, 1095
MseI TTAA 3 cut(s) 98, 588, 825
MslI CAYNNNNRTG 1 cut(s) 920
MspA1I CMGCKG 2 cut(s) 208, 382
MspCI CTTAAG 1 cut(s) 587
MvaI CCWGG 3 cut(s) 509, 551, 910
MvnI CGCG 5 cut(s) 363, 382, 529, 584, 966
NaeI GCCGGC 2 cut(s) 357, 1097
NciI CCSGG 7 cut(s) 13, 314, 315, 352, 428, 496, 1000
NdeII GATC 5 cut(s) 15, 471, 756, 789, 961
NgoMIV GCCGGC 2 cut(s) 355, 1095
NlaIII CATG 4 cut(s) 732, 851, 950, 962
NmeAIII GCCGAG 2 cut(s) 657, 961
NmuCI GTSAC 2 cut(s) 578, 1063
NspI RCATGY 3 cut(s) 732, 851, 950
PaeI GCATGC 2 cut(s) 732, 950
PaeR7I CTCGAG 1 cut(s) 392
PciI ACATGT 1 cut(s) 847
PcsI WCGNNNNNNNCGW 3 cut(s) 222, 637, 923
PdiI GCCGGC 2 cut(s) 357, 1097
PfeI GAWTC 4 cut(s) 73, 211, 271, 617
PflFI GACNNNGTC 1 cut(s) 974
PleI GAGTC 5 cut(s) 187, 304, 832, 849, 1050
PpsI GAGTC 5 cut(s) 187, 304, 832, 849, 1050
PpuMI RGGWCCY 2 cut(s) 430, 717
PscI ACATGT 1 cut(s) 847
PshAI GACNNNNGTC 1 cut(s) 178
Psp1406I AACGTT 1 cut(s) 95
Psp5II RGGWCCY 2 cut(s) 430, 717
Psp6I CCWGG 3 cut(s) 507, 549, 908
PspFI CCCAGC 1 cut(s) 441
PspGI CCWGG 3 cut(s) 507, 549, 908
PspPPI RGGWCCY 2 cut(s) 430, 717
PspXI VCTCGAGB 1 cut(s) 392
PsuI RGATCY 2 cut(s) 471, 789
PsyI GACNNNGTC 1 cut(s) 974
RsaI GTAC 1 cut(s) 286
RsaNI GTAC 1 cut(s) 285
RseI CAYNNNNRTG 1 cut(s) 920
Rsr2I CGGWCCG 1 cut(s) 1054
RsrII CGGWCCG 1 cut(s) 1054
SacII CCGCGG 1 cut(s) 383
SalI GTCGAC 2 cut(s) 298, 968
SaqAI TTAA 3 cut(s) 98, 588, 825
Sau3AI GATC 5 cut(s) 15, 471, 756, 789, 961
SchI GAGTC 5 cut(s) 188, 305, 832, 849, 1051
SduI GDGCHC 5 cut(s) 64, 442, 779, 896, 917
SfaNI GCATC 3 cut(s) 655, 912, 1099
Sfr274I CTCGAG 1 cut(s) 392
Sfr303I CCGCGG 1 cut(s) 383
SgrBI CCGCGG 1 cut(s) 383
SgrDI CGTCGACG 1 cut(s) 968
SinI GGWCC 7 cut(s) 42, 424, 430, 717, 863, 1030, 1054
SlaI CTCGAG 1 cut(s) 392
SmaI CCCGGG 1 cut(s) 315
SmiMI CAYNNNNRTG 1 cut(s) 920
SmlI CTYRAG 3 cut(s) 152, 392, 587
SmoI CTYRAG 3 cut(s) 152, 392, 587
SphI GCATGC 2 cut(s) 732, 950
Sse9I AATT 1 cut(s) 1122
SspMI CTAG 2 cut(s) 176, 611
StyI CCWWGG 2 cut(s) 231, 859
TaaI ACNGT 3 cut(s) 304, 1030, 1069
TaiI ACGT 3 cut(s) 98, 643, 978
TaqI TCGA 5 cut(s) 299, 393, 740, 969, 1045
TaqII GACCGA 2 cut(s) 755, 1097
TasI AATT 1 cut(s) 1122
TauI GCSGC 7 cut(s) 366, 382, 489, 529, 1012, 1015, 1018
TfiI GAWTC 4 cut(s) 73, 211, 271, 617
Tru1I TTAA 3 cut(s) 98, 588, 825
Tru9I TTAA 3 cut(s) 98, 588, 825
TscAI CASTG 2 cut(s) 38, 64
TseFI GTSAC 2 cut(s) 578, 1063
TseI GCWGC 5 cut(s) 388, 452, 517, 651, 950
Tsp45I GTSAC 2 cut(s) 578, 1063
TspGWI ACGGA 5 cut(s) 93, 272, 334, 855, 1012
TspMI CCCGGG 1 cut(s) 313
TspRI CASTG 2 cut(s) 38, 64
Tth111I GACNNNGTC 1 cut(s) 974
Vha464I CTTAAG 1 cut(s) 587
VneI GTGCAC 1 cut(s) 775
VpaK11BI GGWCC 7 cut(s) 42, 424, 430, 717, 863, 1030, 1054
XceI RCATGY 3 cut(s) 732, 851, 950
XhoI CTCGAG 1 cut(s) 392
XmaI CCCGGG 1 cut(s) 313
XmiI GTMKAC 3 cut(s) 256, 299, 969
XspI CTAG 2 cut(s) 176, 611
ZraI GACGTC 1 cut(s) 976
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.