Rroxscaffold_117G00451740

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000117
OG0000098
Physical Location & Seq
Forward (+)
7955 .. 9122
1168 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_117G00451740.1

Sequence Viewer

Length: 978 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

325

Amino Acids

35.75

Weight (kDa)

10.52

Isoelectric Point (pI)

53.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 958
AccBSI CCGCTC 1 cut(s) 679
AccI GTMKAC 2 cut(s) 550, 604
AccII CGCG 3 cut(s) 669, 688, 934
AccIII TCCGGA 1 cut(s) 894
AclI AACGTT 1 cut(s) 389
AclWI GGATC 5 cut(s) 34, 136, 318, 777, 790
AcoI YGGCCR 1 cut(s) 659
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 591, 865
AfiI CCNNNNNNNGG 7 cut(s) 345, 371, 657, 661, 668, 958, 971
AgsI TTSAA 2 cut(s) 613, 904
AjiI CACGTC 1 cut(s) 938
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 480, 697
AluI AGCT 5 cut(s) 105, 186, 229, 480, 697
Alw21I GWGCWC 2 cut(s) 231, 948
Alw26I GTCTC 1 cut(s) 838
AlwI GGATC 5 cut(s) 34, 136, 318, 777, 790
AlwNI CAGNNNCTG 2 cut(s) 831, 958
Ama87I CYCGRG 4 cut(s) 618, 698, 754, 771
Aor13HI TCCGGA 1 cut(s) 894
AoxI GGCC 3 cut(s) 136, 659, 907
ApeKI GCWGC 2 cut(s) 58, 694
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 920
AspS9I GGNCC 5 cut(s) 336, 736, 889, 907, 961
AsuC2I CCSGG 6 cut(s) 308, 619, 620, 658, 871, 914
AsuHPI GGTGA 2 cut(s) 700, 828
AvaI CYCGRG 4 cut(s) 618, 698, 754, 771
AvaII GGWCC 4 cut(s) 336, 736, 889, 961
BaeGI GKGCMC 2 cut(s) 358, 748
BamHI GGATCC 1 cut(s) 782
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 483
Bbv12I GWGCWC 2 cut(s) 231, 948
BbvI GCAGC 2 cut(s) 45, 706
BcnI CCSGG 6 cut(s) 308, 619, 620, 658, 871, 914
BcoDI GTCTC 1 cut(s) 838
BfaI CTAG 2 cut(s) 102, 470
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 915
BisI GCNGC 7 cut(s) 59, 269, 670, 686, 695, 910, 956
BlsI GCNGC 7 cut(s) 60, 270, 671, 687, 696, 911, 957
Bme1390I CCNGG 6 cut(s) 308, 619, 620, 658, 871, 914
Bme18I GGWCC 4 cut(s) 336, 736, 889, 961
BmeT110I CYCGRG 4 cut(s) 618, 698, 754, 771
BmgBI CACGTC 1 cut(s) 938
BmgT120I GGNCC 5 cut(s) 336, 736, 889, 907, 961
BmiI GGNNCC 6 cut(s) 337, 426, 737, 738, 784, 963
BmrFI CCNGG 6 cut(s) 308, 619, 620, 658, 871, 914
BmrI ACTGGG 2 cut(s) 640, 742
BmsI GCATC 1 cut(s) 841
BmuI ACTGGG 2 cut(s) 640, 742
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 292, 483
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 6 cut(s) 308, 619, 620, 658, 871, 914
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 838
BsaJI CCNNGG 8 cut(s) 525, 618, 619, 656, 686, 772, 839, 913
BsaWI WCCGGW 2 cut(s) 894, 922
BsaXI ACNNNNNCTCC 1 cut(s) 953
Bsc4I CCNNNNNNNGG 7 cut(s) 345, 371, 657, 661, 668, 958, 971
Bse118I RCCGGY 1 cut(s) 661
Bse1I ACTGG 5 cut(s) 69, 169, 593, 646, 737
BseAI TCCGGA 1 cut(s) 894
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 8 cut(s) 525, 618, 619, 656, 686, 772, 839, 913
BseLI CCNNNNNNNGG 7 cut(s) 345, 371, 657, 661, 668, 958, 971
BseMII CTCAG 1 cut(s) 590
BseNI ACTGG 5 cut(s) 69, 169, 593, 646, 737
BseSI GKGCMC 2 cut(s) 358, 748
BseX3I CGGCCG 1 cut(s) 659
BseXI GCAGC 2 cut(s) 45, 706
BseYI CCCAGC 2 cut(s) 273, 747
Bsh1236I CGCG 3 cut(s) 669, 688, 934
Bsh1285I CGRYCG 2 cut(s) 662, 870
BshFI GGCC 3 cut(s) 138, 661, 909
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 662, 870
BsiHKAI GWGCWC 2 cut(s) 231, 948
BsiHKCI CYCGRG 4 cut(s) 618, 698, 754, 771
BsiSI CCGG 9 cut(s) 308, 619, 658, 662, 870, 895, 913, 923, 972
BslFI GGGAC 4 cut(s) 570, 638, 743, 749
BslI CCNNNNNNNGG 7 cut(s) 345, 371, 657, 661, 668, 958, 971
BsmAI GTCTC 1 cut(s) 838
BsmFI GGGAC 4 cut(s) 570, 638, 743, 749
BsnI GGCC 3 cut(s) 138, 661, 909
Bso31I GGTCTC 1 cut(s) 838
BsoBI CYCGRG 4 cut(s) 618, 698, 754, 771
Bsp1286I GDGCHC 4 cut(s) 231, 358, 748, 948
Bsp13I TCCGGA 1 cut(s) 894
Bsp143I GATC 4 cut(s) 26, 128, 310, 782
BspANI GGCC 3 cut(s) 138, 661, 909
BspCNI CTCAG 1 cut(s) 591
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 894
BspFNI CGCG 3 cut(s) 669, 688, 934
BspLI GGNNCC 6 cut(s) 337, 426, 737, 738, 784, 963
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 777, 790
BspQI GCTCTTC 2 cut(s) 4, 953
BspTNI GGTCTC 1 cut(s) 838
BsrBI CCGCTC 1 cut(s) 679
BsrFI RCCGGY 1 cut(s) 661
BsrI ACTGG 5 cut(s) 69, 169, 593, 646, 737
BssAI RCCGGY 1 cut(s) 661
BssECI CCNNGG 8 cut(s) 525, 618, 619, 656, 686, 772, 839, 913
BssMI GATC 4 cut(s) 26, 128, 310, 782
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 525, 839
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 3 cut(s) 151, 561, 609
Bst6I CTCTTC 2 cut(s) 4, 953
BstC8I GCNNGC 4 cut(s) 318, 328, 663, 667
BstDEI CTNAG 2 cut(s) 235, 599
BstDSI CCRYGG 1 cut(s) 686
BstFNI CGCG 3 cut(s) 669, 688, 934
BstHHI GCGC 1 cut(s) 920
BstKTI GATC 4 cut(s) 29, 131, 313, 785
BstMAI GTCTC 1 cut(s) 838
BstMBI GATC 4 cut(s) 26, 128, 310, 782
BstMCI CGRYCG 2 cut(s) 662, 870
BstPAI GACNNNNGTC 1 cut(s) 472
BstSCI CCNGG 6 cut(s) 306, 617, 618, 656, 869, 912
BstSLI GKGCMC 2 cut(s) 358, 748
BstUI CGCG 3 cut(s) 669, 688, 934
BstV1I GCAGC 2 cut(s) 45, 706
BstV2I GAAGAC 2 cut(s) 292, 483
BstX2I RGATCY 1 cut(s) 782
BstYI RGATCY 1 cut(s) 782
BstZI CGGCCG 1 cut(s) 659
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 661, 909
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 686
BtrI CACGTC 1 cut(s) 938
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 2 cut(s) 358, 566
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 318, 328, 663, 667
CaiI CAGNNNCTG 2 cut(s) 831, 958
CfoI GCGC 1 cut(s) 920
Cfr10I RCCGGY 1 cut(s) 661
Cfr13I GGNCC 5 cut(s) 336, 736, 889, 907, 961
Cfr42I CCGCGG 1 cut(s) 689
Cfr9I CCCGGG 1 cut(s) 618
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 590, 864
CviQI GTAC 3 cut(s) 162, 590, 864
DdeI CTNAG 2 cut(s) 235, 599
DpnI GATC 4 cut(s) 28, 130, 312, 784
DpnII GATC 4 cut(s) 26, 128, 310, 782
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 659
EagI CGGCCG 1 cut(s) 659
Eam1104I CTCTTC 2 cut(s) 4, 953
EarI CTCTTC 2 cut(s) 4, 953
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 659
Eco130I CCWWGG 2 cut(s) 525, 839
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 838
Eco47I GGWCC 4 cut(s) 336, 736, 889, 961
Eco52I CGGCCG 1 cut(s) 659
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 618, 698, 754, 771
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 736
EcoT14I CCWWGG 2 cut(s) 525, 839
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 525, 839
FaiI YATR 3 cut(s) 47, 435, 860
FaqI GGGAC 4 cut(s) 570, 638, 743, 749
FauI CCCGC 4 cut(s) 325, 366, 508, 684
FblI GTMKAC 2 cut(s) 550, 604
Fnu4HI GCNGC 7 cut(s) 59, 269, 670, 686, 695, 910, 956
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 670, 686, 695, 910, 956
FspBI CTAG 2 cut(s) 102, 470
GlaI GCGC 1 cut(s) 919
GluI GCNGC 7 cut(s) 59, 269, 670, 686, 695, 910, 956
GsaI CCCAGC 2 cut(s) 277, 751
HaeIII GGCC 3 cut(s) 138, 661, 909
HapII CCGG 9 cut(s) 308, 619, 658, 662, 870, 895, 913, 923, 972
HhaI GCGC 1 cut(s) 920
Hin6I GCGC 1 cut(s) 918
HinP1I GCGC 1 cut(s) 918
HincII GTYRAC 1 cut(s) 605
HindII GTYRAC 1 cut(s) 605
HinfI GANTC 7 cut(s) 175, 367, 473, 506, 566, 576, 601
HpaII CCGG 9 cut(s) 308, 619, 658, 662, 870, 895, 913, 923, 972
HphI GGTGA 2 cut(s) 700, 828
Hpy166II GTNNAC 4 cut(s) 551, 605, 708, 836
Hpy188I TCNGA 6 cut(s) 94, 174, 366, 467, 575, 600
Hpy188III TCNNGA 3 cut(s) 728, 771, 895
Hpy8I GTNNAC 4 cut(s) 551, 605, 708, 836
Hpy99I CGWCG 3 cut(s) 44, 723, 939
HpyAV CCTTC 3 cut(s) 17, 415, 628
HpyCH4III ACNGT 3 cut(s) 151, 561, 609
HpyCH4IV ACGT 3 cut(s) 39, 389, 937
HpyF3I CTNAG 2 cut(s) 235, 599
HpySE526I ACGT 3 cut(s) 39, 389, 937
HspAI GCGC 1 cut(s) 918
KflI GGGWCCC 1 cut(s) 736
Kpn2I TCCGGA 1 cut(s) 894
KroI GCCGGC 1 cut(s) 661
KroNI GCCGGC 1 cut(s) 663
KspI CCGCGG 1 cut(s) 689
Kzo9I GATC 4 cut(s) 26, 128, 310, 782
LguI GCTCTTC 2 cut(s) 4, 953
LmnI GCTCC 2 cut(s) 430, 637
Lsp1109I GCAGC 2 cut(s) 45, 706
LweI GCATC 1 cut(s) 841
MaeI CTAG 2 cut(s) 102, 470
MaeII ACGT 3 cut(s) 39, 389, 937
MaeIII GTNAC 2 cut(s) 83, 776
MalI GATC 4 cut(s) 28, 130, 312, 784
MbiI CCGCTC 1 cut(s) 679
MboI GATC 4 cut(s) 26, 128, 310, 782
MboII GAAGA 4 cut(s) 21, 292, 483, 940
MflI RGATCY 1 cut(s) 782
MhlI GDGCHC 4 cut(s) 231, 358, 748, 948
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 482, 610
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 8 cut(s) 109, 339, 372, 453, 763, 767, 821, 902
MroI TCCGGA 1 cut(s) 894
MroNI GCCGGC 1 cut(s) 661
MseI TTAA 3 cut(s) 108, 257, 392
MspA1I CMGCKG 3 cut(s) 503, 688, 958
MspI CCGG 9 cut(s) 308, 619, 658, 662, 870, 895, 913, 923, 972
MspR9I CCNGG 6 cut(s) 308, 619, 620, 658, 871, 914
MvnI CGCG 3 cut(s) 669, 688, 934
NaeI GCCGGC 1 cut(s) 663
NciI CCSGG 6 cut(s) 308, 619, 620, 658, 871, 914
NdeII GATC 4 cut(s) 26, 128, 310, 782
NgoMIV GCCGGC 1 cut(s) 661
NlaIV GGNNCC 6 cut(s) 337, 426, 737, 738, 784, 963
PaeR7I CTCGAG 2 cut(s) 698, 754
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 953
PdiI GCCGGC 1 cut(s) 663
PfeI GAWTC 5 cut(s) 175, 367, 506, 566, 576
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 958
PkrI GCNGC 7 cut(s) 60, 270, 671, 687, 696, 911, 957
PleI GAGTC 2 cut(s) 481, 609
PpsI GAGTC 2 cut(s) 481, 609
PpuMI RGGWCCY 1 cut(s) 736
PshAI GACNNNNGTC 1 cut(s) 472
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 736
PspFI CCCAGC 2 cut(s) 273, 747
PspN4I GGNNCC 6 cut(s) 337, 426, 737, 738, 784, 963
PspPI GGNCC 5 cut(s) 336, 736, 889, 907, 961
PspPPI RGGWCCY 1 cut(s) 736
PspXI VCTCGAGB 2 cut(s) 698, 754
PstNI CAGNNNCTG 2 cut(s) 831, 958
PsuI RGATCY 1 cut(s) 782
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 591, 865
RsaNI GTAC 3 cut(s) 162, 590, 864
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 689
SalI GTCGAC 1 cut(s) 603
SapI GCTCTTC 2 cut(s) 4, 953
SaqAI TTAA 3 cut(s) 108, 257, 392
SatI GCNGC 7 cut(s) 59, 269, 670, 686, 695, 910, 956
Sau3AI GATC 4 cut(s) 26, 128, 310, 782
Sau96I GGNCC 5 cut(s) 336, 736, 889, 907, 961
SchI GAGTC 2 cut(s) 482, 610
ScrFI CCNGG 6 cut(s) 308, 619, 620, 658, 871, 914
SduI GDGCHC 4 cut(s) 231, 358, 748, 948
SfaNI GCATC 1 cut(s) 841
Sfr274I CTCGAG 2 cut(s) 698, 754
Sfr303I CCGCGG 1 cut(s) 689
SgrBI CCGCGG 1 cut(s) 689
SinI GGWCC 4 cut(s) 336, 736, 889, 961
SlaI CTCGAG 2 cut(s) 698, 754
SmaI CCCGGG 1 cut(s) 620
SmlI CTYRAG 3 cut(s) 446, 698, 754
SmoI CTYRAG 3 cut(s) 446, 698, 754
Sse9I AATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 102, 470
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 617, 618, 656, 869, 912
StyI CCWWGG 2 cut(s) 525, 839
TaaI ACNGT 3 cut(s) 151, 561, 609
TaiI ACGT 3 cut(s) 42, 392, 940
TaqI TCGA 5 cut(s) 21, 131, 604, 699, 755
TaqII GACCGA 1 cut(s) 877
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 672, 688, 912, 958
TfiI GAWTC 5 cut(s) 175, 367, 506, 566, 576
Tru1I TTAA 3 cut(s) 108, 257, 392
Tru9I TTAA 3 cut(s) 108, 257, 392
TscAI CASTG 2 cut(s) 358, 566
TseI GCWGC 2 cut(s) 58, 694
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 387, 577, 640, 795
TspMI CCCGGG 1 cut(s) 618
TspRI CASTG 2 cut(s) 358, 566
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 958
VpaK11BI GGWCC 4 cut(s) 336, 736, 889, 961
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 698, 754
XmaI CCCGGG 1 cut(s) 618
XmiI GTMKAC 2 cut(s) 550, 604
XspI CTAG 2 cut(s) 102, 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.