Rroxscaffold_38G00444550

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000038
OG0000098
Physical Location & Seq
Forward (+)
49596 .. 50759
1164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_38G00444550.1

Sequence Viewer

Length: 939 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACCGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGTCGGATTCCCCTTGTCCGTACCAGTTCGAGTCGACTGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

312

Amino Acids

34.38

Weight (kDa)

10.15

Isoelectric Point (pI)

53.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 919
AccBSI CCGCTC 1 cut(s) 640
AccI GTMKAC 1 cut(s) 566
AccII CGCG 3 cut(s) 630, 649, 895
AccIII TCCGGA 1 cut(s) 855
AclI AACGTT 1 cut(s) 389
AclWI GGATC 5 cut(s) 34, 136, 318, 738, 751
AcoI YGGCCR 1 cut(s) 620
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 554, 826
AfiI CCNNNNNNNGG 6 cut(s) 345, 371, 618, 622, 629, 919
AgsI TTSAA 2 cut(s) 575, 865
AjiI CACGTC 1 cut(s) 899
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 480, 658
AluI AGCT 5 cut(s) 105, 186, 229, 480, 658
Alw21I GWGCWC 2 cut(s) 231, 909
Alw26I GTCTC 1 cut(s) 799
AlwI GGATC 5 cut(s) 34, 136, 318, 738, 751
AlwNI CAGNNNCTG 2 cut(s) 792, 919
Ama87I CYCGRG 4 cut(s) 580, 659, 715, 732
Aor13HI TCCGGA 1 cut(s) 855
AoxI GGCC 3 cut(s) 136, 620, 868
ApeKI GCWGC 2 cut(s) 58, 655
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 881
AspS9I GGNCC 5 cut(s) 336, 697, 850, 868, 922
AsuC2I CCSGG 6 cut(s) 308, 581, 582, 619, 832, 875
AsuHPI GGTGA 2 cut(s) 661, 789
AvaI CYCGRG 4 cut(s) 580, 659, 715, 732
AvaII GGWCC 4 cut(s) 336, 697, 850, 922
BaeGI GKGCMC 2 cut(s) 358, 709
BamHI GGATCC 1 cut(s) 743
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 483
Bbv12I GWGCWC 2 cut(s) 231, 909
BbvI GCAGC 2 cut(s) 45, 667
BcnI CCSGG 6 cut(s) 308, 581, 582, 619, 832, 875
BcoDI GTCTC 1 cut(s) 799
BfaI CTAG 2 cut(s) 102, 470
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 876
BisI GCNGC 7 cut(s) 59, 269, 631, 647, 656, 871, 917
BlsI GCNGC 7 cut(s) 60, 270, 632, 648, 657, 872, 918
Bme1390I CCNGG 6 cut(s) 308, 581, 582, 619, 832, 875
Bme18I GGWCC 4 cut(s) 336, 697, 850, 922
BmeT110I CYCGRG 4 cut(s) 580, 659, 715, 732
BmgBI CACGTC 1 cut(s) 899
BmgT120I GGNCC 5 cut(s) 336, 697, 850, 868, 922
BmiI GGNNCC 6 cut(s) 337, 426, 698, 699, 745, 924
BmrFI CCNGG 6 cut(s) 308, 581, 582, 619, 832, 875
BmrI ACTGGG 2 cut(s) 601, 703
BmsI GCATC 1 cut(s) 802
BmuI ACTGGG 2 cut(s) 601, 703
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 292, 483
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 6 cut(s) 308, 581, 582, 619, 832, 875
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 799
BsaJI CCNNGG 7 cut(s) 525, 580, 617, 647, 733, 800, 874
BsaWI WCCGGW 3 cut(s) 164, 855, 883
BsaXI ACNNNNNCTCC 1 cut(s) 914
Bsc4I CCNNNNNNNGG 6 cut(s) 345, 371, 618, 622, 629, 919
Bse118I RCCGGY 1 cut(s) 622
Bse1I ACTGG 4 cut(s) 69, 556, 607, 698
BseAI TCCGGA 1 cut(s) 855
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 525, 580, 617, 647, 733, 800, 874
BseLI CCNNNNNNNGG 6 cut(s) 345, 371, 618, 622, 629, 919
BseNI ACTGG 4 cut(s) 69, 556, 607, 698
BseSI GKGCMC 2 cut(s) 358, 709
BseX3I CGGCCG 1 cut(s) 620
BseXI GCAGC 2 cut(s) 45, 667
BseYI CCCAGC 2 cut(s) 273, 708
Bsh1236I CGCG 3 cut(s) 630, 649, 895
Bsh1285I CGRYCG 2 cut(s) 623, 831
BshFI GGCC 3 cut(s) 138, 622, 870
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 623, 831
BsiHKAI GWGCWC 2 cut(s) 231, 909
BsiHKCI CYCGRG 4 cut(s) 580, 659, 715, 732
BsiSI CCGG 9 cut(s) 165, 308, 581, 619, 623, 831, 856, 874, 884
BslFI GGGAC 3 cut(s) 599, 704, 710
BslI CCNNNNNNNGG 6 cut(s) 345, 371, 618, 622, 629, 919
BsmAI GTCTC 1 cut(s) 799
BsmFI GGGAC 3 cut(s) 599, 704, 710
BsnI GGCC 3 cut(s) 138, 622, 870
Bso31I GGTCTC 1 cut(s) 799
BsoBI CYCGRG 4 cut(s) 580, 659, 715, 732
Bsp1286I GDGCHC 4 cut(s) 231, 358, 709, 909
Bsp13I TCCGGA 1 cut(s) 855
Bsp143I GATC 4 cut(s) 26, 128, 310, 743
BspANI GGCC 3 cut(s) 138, 622, 870
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 855
BspFNI CGCG 3 cut(s) 630, 649, 895
BspLI GGNNCC 6 cut(s) 337, 426, 698, 699, 745, 924
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 738, 751
BspQI GCTCTTC 2 cut(s) 4, 914
BspTNI GGTCTC 1 cut(s) 799
BsrBI CCGCTC 1 cut(s) 640
BsrFI RCCGGY 1 cut(s) 622
BsrI ACTGG 4 cut(s) 69, 556, 607, 698
BssAI RCCGGY 1 cut(s) 622
BssECI CCNNGG 7 cut(s) 525, 580, 617, 647, 733, 800, 874
BssMI GATC 4 cut(s) 26, 128, 310, 743
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 525, 800
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 571
Bst6I CTCTTC 2 cut(s) 4, 914
BstC8I GCNNGC 4 cut(s) 318, 328, 624, 628
BstDEI CTNAG 1 cut(s) 235
BstDSI CCRYGG 1 cut(s) 647
BstFNI CGCG 3 cut(s) 630, 649, 895
BstHHI GCGC 1 cut(s) 881
BstKTI GATC 4 cut(s) 29, 131, 313, 746
BstMAI GTCTC 1 cut(s) 799
BstMBI GATC 4 cut(s) 26, 128, 310, 743
BstMCI CGRYCG 2 cut(s) 623, 831
BstPAI GACNNNNGTC 1 cut(s) 472
BstSCI CCNGG 6 cut(s) 306, 579, 580, 617, 830, 873
BstSLI GKGCMC 2 cut(s) 358, 709
BstUI CGCG 3 cut(s) 630, 649, 895
BstV1I GCAGC 2 cut(s) 45, 667
BstV2I GAAGAC 2 cut(s) 292, 483
BstX2I RGATCY 1 cut(s) 743
BstYI RGATCY 1 cut(s) 743
BstZI CGGCCG 1 cut(s) 620
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 622, 870
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 647
BtrI CACGTC 1 cut(s) 899
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 1 cut(s) 358
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 318, 328, 624, 628
CaiI CAGNNNCTG 2 cut(s) 792, 919
CfoI GCGC 1 cut(s) 881
Cfr10I RCCGGY 1 cut(s) 622
Cfr13I GGNCC 5 cut(s) 336, 697, 850, 868, 922
Cfr42I CCGCGG 1 cut(s) 650
Cfr9I CCCGGG 1 cut(s) 580
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 553, 825
CviQI GTAC 3 cut(s) 162, 553, 825
DdeI CTNAG 1 cut(s) 235
DpnI GATC 4 cut(s) 28, 130, 312, 745
DpnII GATC 4 cut(s) 26, 128, 310, 743
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 620
EagI CGGCCG 1 cut(s) 620
Eam1104I CTCTTC 2 cut(s) 4, 914
EarI CTCTTC 2 cut(s) 4, 914
EciI GGCGGA 2 cut(s) 293, 922
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 620
Eco130I CCWWGG 2 cut(s) 525, 800
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 799
Eco47I GGWCC 4 cut(s) 336, 697, 850, 922
Eco52I CGGCCG 1 cut(s) 620
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 580, 659, 715, 732
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 697
EcoT14I CCWWGG 2 cut(s) 525, 800
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 525, 800
FaiI YATR 3 cut(s) 47, 435, 821
FaqI GGGAC 3 cut(s) 599, 704, 710
FauI CCCGC 4 cut(s) 325, 366, 508, 645
FblI GTMKAC 1 cut(s) 566
Fnu4HI GCNGC 7 cut(s) 59, 269, 631, 647, 656, 871, 917
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 631, 647, 656, 871, 917
FspBI CTAG 2 cut(s) 102, 470
GlaI GCGC 1 cut(s) 880
GluI GCNGC 7 cut(s) 59, 269, 631, 647, 656, 871, 917
GsaI CCCAGC 2 cut(s) 277, 712
HaeIII GGCC 3 cut(s) 138, 622, 870
HapII CCGG 9 cut(s) 165, 308, 581, 619, 623, 831, 856, 874, 884
HhaI GCGC 1 cut(s) 881
Hin6I GCGC 1 cut(s) 879
HinP1I GCGC 1 cut(s) 879
HincII GTYRAC 1 cut(s) 567
HindII GTYRAC 1 cut(s) 567
HinfI GANTC 6 cut(s) 175, 367, 473, 506, 539, 563
HpaII CCGG 9 cut(s) 165, 308, 581, 619, 623, 831, 856, 874, 884
HphI GGTGA 2 cut(s) 661, 789
Hpy166II GTNNAC 3 cut(s) 567, 669, 797
Hpy188I TCNGA 5 cut(s) 94, 174, 366, 467, 538
Hpy188III TCNNGA 3 cut(s) 689, 732, 856
Hpy8I GTNNAC 3 cut(s) 567, 669, 797
Hpy99I CGWCG 3 cut(s) 44, 684, 900
HpyAV CCTTC 3 cut(s) 17, 415, 589
HpyCH4III ACNGT 2 cut(s) 151, 571
HpyCH4IV ACGT 3 cut(s) 39, 389, 898
HpyF3I CTNAG 1 cut(s) 235
HpySE526I ACGT 3 cut(s) 39, 389, 898
HspAI GCGC 1 cut(s) 879
KflI GGGWCCC 1 cut(s) 697
Kpn2I TCCGGA 1 cut(s) 855
KroI GCCGGC 1 cut(s) 622
KroNI GCCGGC 1 cut(s) 624
KspI CCGCGG 1 cut(s) 650
Kzo9I GATC 4 cut(s) 26, 128, 310, 743
LguI GCTCTTC 2 cut(s) 4, 914
LmnI GCTCC 2 cut(s) 430, 598
Lsp1109I GCAGC 2 cut(s) 45, 667
LweI GCATC 1 cut(s) 802
MaeI CTAG 2 cut(s) 102, 470
MaeII ACGT 3 cut(s) 39, 389, 898
MaeIII GTNAC 2 cut(s) 83, 737
MalI GATC 4 cut(s) 28, 130, 312, 745
MbiI CCGCTC 1 cut(s) 640
MboI GATC 4 cut(s) 26, 128, 310, 743
MboII GAAGA 4 cut(s) 21, 292, 483, 901
MflI RGATCY 1 cut(s) 743
MhlI GDGCHC 4 cut(s) 231, 358, 709, 909
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 482, 572
MmeI TCCRAC 2 cut(s) 445, 516
MnlI CCTC 8 cut(s) 109, 339, 372, 453, 724, 728, 782, 863
MroI TCCGGA 1 cut(s) 855
MroNI GCCGGC 1 cut(s) 622
MseI TTAA 3 cut(s) 108, 257, 392
MspA1I CMGCKG 3 cut(s) 503, 649, 919
MspI CCGG 9 cut(s) 165, 308, 581, 619, 623, 831, 856, 874, 884
MspR9I CCNGG 6 cut(s) 308, 581, 582, 619, 832, 875
MvnI CGCG 3 cut(s) 630, 649, 895
NaeI GCCGGC 1 cut(s) 624
NciI CCSGG 6 cut(s) 308, 581, 582, 619, 832, 875
NdeII GATC 4 cut(s) 26, 128, 310, 743
NgoMIV GCCGGC 1 cut(s) 622
NlaIV GGNNCC 6 cut(s) 337, 426, 698, 699, 745, 924
PaeR7I CTCGAG 2 cut(s) 659, 715
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 914
PdiI GCCGGC 1 cut(s) 624
PfeI GAWTC 4 cut(s) 175, 367, 506, 539
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 919
PkrI GCNGC 7 cut(s) 60, 270, 632, 648, 657, 872, 918
PleI GAGTC 2 cut(s) 481, 571
PpsI GAGTC 2 cut(s) 481, 571
PpuMI RGGWCCY 1 cut(s) 697
PshAI GACNNNNGTC 1 cut(s) 472
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 697
PspFI CCCAGC 2 cut(s) 273, 708
PspN4I GGNNCC 6 cut(s) 337, 426, 698, 699, 745, 924
PspPI GGNCC 5 cut(s) 336, 697, 850, 868, 922
PspPPI RGGWCCY 1 cut(s) 697
PspXI VCTCGAGB 2 cut(s) 659, 715
PstNI CAGNNNCTG 2 cut(s) 792, 919
PsuI RGATCY 1 cut(s) 743
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 554, 826
RsaNI GTAC 3 cut(s) 162, 553, 825
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 650
SalI GTCGAC 1 cut(s) 565
SapI GCTCTTC 2 cut(s) 4, 914
SaqAI TTAA 3 cut(s) 108, 257, 392
SatI GCNGC 7 cut(s) 59, 269, 631, 647, 656, 871, 917
Sau3AI GATC 4 cut(s) 26, 128, 310, 743
Sau96I GGNCC 5 cut(s) 336, 697, 850, 868, 922
SchI GAGTC 2 cut(s) 482, 572
ScrFI CCNGG 6 cut(s) 308, 581, 582, 619, 832, 875
SduI GDGCHC 4 cut(s) 231, 358, 709, 909
SfaNI GCATC 1 cut(s) 802
Sfr274I CTCGAG 2 cut(s) 659, 715
Sfr303I CCGCGG 1 cut(s) 650
SgrBI CCGCGG 1 cut(s) 650
SinI GGWCC 4 cut(s) 336, 697, 850, 922
SlaI CTCGAG 2 cut(s) 659, 715
SmaI CCCGGG 1 cut(s) 582
SmlI CTYRAG 3 cut(s) 446, 659, 715
SmoI CTYRAG 3 cut(s) 446, 659, 715
Sse9I AATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 102, 470
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 579, 580, 617, 830, 873
StyI CCWWGG 2 cut(s) 525, 800
TaaI ACNGT 2 cut(s) 151, 571
TaiI ACGT 3 cut(s) 42, 392, 901
TaqI TCGA 6 cut(s) 21, 131, 561, 566, 660, 716
TaqII GACCGA 1 cut(s) 838
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 633, 649, 873, 919
TfiI GAWTC 4 cut(s) 175, 367, 506, 539
Tru1I TTAA 3 cut(s) 108, 257, 392
Tru9I TTAA 3 cut(s) 108, 257, 392
TscAI CASTG 1 cut(s) 358
TseI GCWGC 2 cut(s) 58, 655
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 387, 540, 601, 756
TspMI CCCGGG 1 cut(s) 580
TspRI CASTG 1 cut(s) 358
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 919
VpaK11BI GGWCC 4 cut(s) 336, 697, 850, 922
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 659, 715
XmaI CCCGGG 1 cut(s) 580
XmiI GTMKAC 1 cut(s) 566
XspI CTAG 2 cut(s) 102, 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.