Rroxscaffold_85G00451230

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000085
OG0000098
Physical Location & Seq
Forward (+)
12286 .. 13896
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_85G00451230.1

Sequence Viewer

Length: 714 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTATCCCCGTGGGACCATCGCAATGCTTTGTTTTAATTAAACAATCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGATCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCGTCCGTCCCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGCTCACCGACAGCCGACGGGTTCGGGATCGGGACCCCCGTGCCCAGCCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGTCGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCGTGGTGGGCAGATCTGCACCGACGGCCGCTCCGCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCTCGGCACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

237

Amino Acids

25.19

Weight (kDa)

11.5

Isoelectric Point (pI)

73.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 680
Acc36I ACCTGC 2 cut(s) 359, 680
AccBSI CCGCTC 2 cut(s) 218, 555
AccII CGCG 5 cut(s) 208, 227, 474, 594, 650
AccIII TCCGGA 1 cut(s) 434
AclWI GGATC 4 cut(s) 34, 277, 318, 331
AcoI YGGCCR 3 cut(s) 199, 550, 632
AfaI GTAC 2 cut(s) 134, 406
AfiI CCNNNNNNNGG 5 cut(s) 197, 498, 634, 641, 671
AflII CTTAAG 1 cut(s) 653
AgsI TTSAA 2 cut(s) 155, 444
AhdI GACNNNNNGTC 1 cut(s) 369
AjiI CACGTC 1 cut(s) 478
AluBI AGCT 2 cut(s) 236, 245
AluI AGCT 2 cut(s) 236, 245
Alw21I GWGCWC 1 cut(s) 488
Alw26I GTCTC 1 cut(s) 379
AlwI GGATC 4 cut(s) 34, 277, 318, 331
Ama87I CYCGRG 4 cut(s) 140, 160, 237, 312
Aor13HI TCCGGA 1 cut(s) 434
AoxI GGCC 4 cut(s) 199, 447, 550, 632
ApeKI GCWGC 5 cut(s) 58, 233, 242, 297, 582
AspLEI GCGC 4 cut(s) 460, 596, 652, 660
AspS9I GGNCC 5 cut(s) 83, 275, 429, 447, 501
AsuC2I CCSGG 5 cut(s) 161, 162, 198, 454, 636
AsuHPI GGTGA 3 cut(s) 239, 369, 704
AvaI CYCGRG 4 cut(s) 140, 160, 237, 312
AvaII GGWCC 4 cut(s) 83, 275, 429, 501
BaeGI GKGCMC 1 cut(s) 287
BamHI GGATCC 1 cut(s) 323
BanII GRGCYC 1 cut(s) 616
Bbv12I GWGCWC 1 cut(s) 488
BbvI GCAGC 5 cut(s) 45, 245, 254, 309, 594
BccI CCATC 2 cut(s) 94, 669
BceAI ACGGC 3 cut(s) 504, 565, 647
BcnI CCSGG 5 cut(s) 161, 162, 198, 454, 636
BcoDI GTCTC 1 cut(s) 379
BfaI CTAG 1 cut(s) 677
BfoI RGCGCY 1 cut(s) 661
BfrI CTTAAG 1 cut(s) 653
BfuAI ACCTGC 2 cut(s) 359, 680
BglI GCCNNNNNGGC 2 cut(s) 455, 631
BglII AGATCT 1 cut(s) 537
Bme1390I CCNGG 5 cut(s) 161, 162, 198, 454, 636
Bme18I GGWCC 4 cut(s) 83, 275, 429, 501
BmeRI GACNNNNNGTC 1 cut(s) 369
BmeT110I CYCGRG 4 cut(s) 140, 160, 237, 312
BmgBI CACGTC 1 cut(s) 478
BmgT120I GGNCC 5 cut(s) 83, 275, 429, 447, 501
BmiI GGNNCC 5 cut(s) 84, 276, 277, 325, 503
BmrFI CCNGG 5 cut(s) 161, 162, 198, 454, 636
BmsI GCATC 1 cut(s) 382
BpuMI CCSGG 5 cut(s) 161, 162, 198, 454, 636
BsaI GGTCTC 1 cut(s) 379
BsaJI CCNNGG 8 cut(s) 78, 160, 196, 225, 313, 380, 453, 526
BsaWI WCCGGW 2 cut(s) 434, 462
BsaXI ACNNNNNCTCC 4 cut(s) 493, 523, 539, 569
Bsc4I CCNNNNNNNGG 5 cut(s) 197, 498, 634, 641, 671
Bse118I RCCGGY 2 cut(s) 410, 560
Bse3DI GCAATG 1 cut(s) 98
BseAI TCCGGA 1 cut(s) 434
BseDI CCNNGG 8 cut(s) 78, 160, 196, 225, 313, 380, 453, 526
BseGI GGATG 1 cut(s) 661
BseLI CCNNNNNNNGG 5 cut(s) 197, 498, 634, 641, 671
BseMI GCAATG 1 cut(s) 98
BseSI GKGCMC 1 cut(s) 287
BseX3I CGGCCG 3 cut(s) 199, 550, 632
BseXI GCAGC 5 cut(s) 45, 245, 254, 309, 594
BseYI CCCAGC 1 cut(s) 286
BsgI GTGCAG 1 cut(s) 526
Bsh1236I CGCG 5 cut(s) 208, 227, 474, 594, 650
Bsh1285I CGRYCG 6 cut(s) 150, 202, 411, 553, 589, 635
BshFI GGCC 4 cut(s) 201, 449, 552, 634
BsiEI CGRYCG 6 cut(s) 150, 202, 411, 553, 589, 635
BsiHKAI GWGCWC 1 cut(s) 488
BsiHKCI CYCGRG 4 cut(s) 140, 160, 237, 312
BsiSI CCGG 9 cut(s) 161, 198, 411, 435, 453, 463, 499, 561, 635
BslFI GGGAC 3 cut(s) 96, 178, 288
BslI CCNNNNNNNGG 5 cut(s) 197, 498, 634, 641, 671
BsmAI GTCTC 1 cut(s) 379
BsmFI GGGAC 3 cut(s) 96, 178, 288
BsnI GGCC 4 cut(s) 201, 449, 552, 634
Bso31I GGTCTC 1 cut(s) 379
BsoBI CYCGRG 4 cut(s) 140, 160, 237, 312
Bsp1286I GDGCHC 3 cut(s) 287, 488, 616
Bsp13I TCCGGA 1 cut(s) 434
Bsp143I GATC 5 cut(s) 26, 147, 269, 323, 537
BspANI GGCC 4 cut(s) 201, 449, 552, 634
BspEI TCCGGA 1 cut(s) 434
BspFNI CGCG 5 cut(s) 208, 227, 474, 594, 650
BspLI GGNNCC 5 cut(s) 84, 276, 277, 325, 503
BspMI ACCTGC 2 cut(s) 359, 680
BspPI GGATC 4 cut(s) 34, 277, 318, 331
BspQI GCTCTTC 2 cut(s) 4, 493
BspTI CTTAAG 1 cut(s) 653
BspTNI GGTCTC 1 cut(s) 379
BsrBI CCGCTC 2 cut(s) 218, 555
BsrDI GCAATG 1 cut(s) 98
BsrFI RCCGGY 2 cut(s) 410, 560
BssAI RCCGGY 2 cut(s) 410, 560
BssECI CCNNGG 8 cut(s) 78, 160, 196, 225, 313, 380, 453, 526
BssMI GATC 5 cut(s) 26, 147, 269, 323, 537
BssT1I CCWWGG 1 cut(s) 380
Bst6I CTCTTC 2 cut(s) 4, 493
BstAFI CTTAAG 1 cut(s) 653
BstC8I GCNNGC 2 cut(s) 206, 562
BstDEI CTNAG 1 cut(s) 711
BstDSI CCRYGG 3 cut(s) 78, 225, 526
BstF5I GGATG 1 cut(s) 661
BstFNI CGCG 5 cut(s) 208, 227, 474, 594, 650
BstH2I RGCGCY 1 cut(s) 661
BstHHI GCGC 4 cut(s) 460, 596, 652, 660
BstKTI GATC 5 cut(s) 29, 150, 272, 326, 540
BstMAI GTCTC 1 cut(s) 379
BstMBI GATC 5 cut(s) 26, 147, 269, 323, 537
BstMCI CGRYCG 6 cut(s) 150, 202, 411, 553, 589, 635
BstSCI CCNGG 5 cut(s) 159, 160, 196, 452, 634
BstSLI GKGCMC 1 cut(s) 287
BstUI CGCG 5 cut(s) 208, 227, 474, 594, 650
BstV1I GCAGC 5 cut(s) 45, 245, 254, 309, 594
BstX2I RGATCY 2 cut(s) 323, 537
BstYI RGATCY 2 cut(s) 323, 537
BstZI CGGCCG 3 cut(s) 199, 550, 632
BsuRI GGCC 4 cut(s) 201, 449, 552, 634
BtgI CCRYGG 3 cut(s) 78, 225, 526
BtgZI GCGATG 1 cut(s) 72
BtrI CACGTC 1 cut(s) 478
BtsCI GGATG 1 cut(s) 661
BveI ACCTGC 2 cut(s) 359, 680
Cac8I GCNNGC 2 cut(s) 206, 562
CfoI GCGC 4 cut(s) 460, 596, 652, 660
Cfr10I RCCGGY 2 cut(s) 410, 560
Cfr13I GGNCC 5 cut(s) 83, 275, 429, 447, 501
Cfr42I CCGCGG 1 cut(s) 228
Cfr9I CCCGGG 1 cut(s) 160
Csp6I GTAC 2 cut(s) 133, 405
CviQI GTAC 2 cut(s) 133, 405
DdeI CTNAG 1 cut(s) 711
DpnI GATC 5 cut(s) 28, 149, 271, 325, 539
DpnII GATC 5 cut(s) 26, 147, 269, 323, 537
DriI GACNNNNNGTC 1 cut(s) 369
EaeI YGGCCR 3 cut(s) 199, 550, 632
EagI CGGCCG 3 cut(s) 199, 550, 632
Eam1104I CTCTTC 2 cut(s) 4, 493
Eam1105I GACNNNNNGTC 1 cut(s) 369
EarI CTCTTC 2 cut(s) 4, 493
EciI GGCGGA 2 cut(s) 501, 547
EclXI CGGCCG 3 cut(s) 199, 550, 632
Eco130I CCWWGG 1 cut(s) 380
Eco24I GRGCYC 1 cut(s) 616
Eco31I GGTCTC 1 cut(s) 379
Eco47I GGWCC 4 cut(s) 83, 275, 429, 501
Eco52I CGGCCG 3 cut(s) 199, 550, 632
Eco88I CYCGRG 4 cut(s) 140, 160, 237, 312
EcoO109I RGGNCCY 1 cut(s) 275
EcoT14I CCWWGG 1 cut(s) 380
EcoT38I GRGCYC 1 cut(s) 616
ErhI CCWWGG 1 cut(s) 380
FaiI YATR 3 cut(s) 47, 401, 641
FaqI GGGAC 3 cut(s) 96, 178, 288
FauI CCCGC 1 cut(s) 223
FokI GGATG 1 cut(s) 648
FriOI GRGCYC 1 cut(s) 616
FspBI CTAG 1 cut(s) 677
GlaI GCGC 4 cut(s) 459, 595, 651, 659
GsaI CCCAGC 1 cut(s) 290
HaeII RGCGCY 1 cut(s) 661
HaeIII GGCC 4 cut(s) 201, 449, 552, 634
HapII CCGG 9 cut(s) 161, 198, 411, 435, 453, 463, 499, 561, 635
HhaI GCGC 4 cut(s) 460, 596, 652, 660
Hin6I GCGC 4 cut(s) 458, 594, 650, 658
HinP1I GCGC 4 cut(s) 458, 594, 650, 658
HinfI GANTC 3 cut(s) 119, 143, 683
HpaII CCGG 9 cut(s) 161, 198, 411, 435, 453, 463, 499, 561, 635
HphI GGTGA 3 cut(s) 239, 369, 704
Hpy166II GTNNAC 1 cut(s) 377
Hpy188I TCNGA 1 cut(s) 118
Hpy188III TCNNGA 4 cut(s) 267, 273, 312, 435
Hpy8I GTNNAC 1 cut(s) 377
Hpy99I CGWCG 5 cut(s) 44, 262, 479, 551, 633
HpyAV CCTTC 2 cut(s) 17, 169
HpyCH4IV ACGT 2 cut(s) 39, 477
HpyCH4V TGCA 2 cut(s) 543, 582
HpyF3I CTNAG 1 cut(s) 711
HpySE526I ACGT 2 cut(s) 39, 477
HspAI GCGC 4 cut(s) 458, 594, 650, 658
KflI GGGWCCC 1 cut(s) 275
Kpn2I TCCGGA 1 cut(s) 434
KroI GCCGGC 1 cut(s) 560
KroNI GCCGGC 1 cut(s) 562
KspI CCGCGG 1 cut(s) 228
Kzo9I GATC 5 cut(s) 26, 147, 269, 323, 537
LguI GCTCTTC 2 cut(s) 4, 493
LmnI GCTCC 2 cut(s) 178, 560
Lsp1109I GCAGC 5 cut(s) 45, 245, 254, 309, 594
LweI GCATC 1 cut(s) 382
MaeI CTAG 1 cut(s) 677
MaeII ACGT 2 cut(s) 39, 477
MaeIII GTNAC 3 cut(s) 317, 644, 699
MalI GATC 5 cut(s) 28, 149, 271, 325, 539
MbiI CCGCTC 2 cut(s) 218, 555
MboI GATC 5 cut(s) 26, 147, 269, 323, 537
MboII GAAGA 2 cut(s) 21, 480
MflI RGATCY 2 cut(s) 323, 537
MhlI GDGCHC 3 cut(s) 287, 488, 616
MluCI AATT 1 cut(s) 105
MlyI GAGTC 1 cut(s) 152
MnlI CCTC 5 cut(s) 303, 308, 442, 519, 608
MroI TCCGGA 1 cut(s) 434
MroNI GCCGGC 1 cut(s) 560
MseI TTAA 3 cut(s) 104, 108, 654
MslI CAYNNNNRTG 1 cut(s) 91
MspA1I CMGCKG 1 cut(s) 227
MspCI CTTAAG 1 cut(s) 653
MspI CCGG 9 cut(s) 161, 198, 411, 435, 453, 463, 499, 561, 635
MspR9I CCNGG 5 cut(s) 161, 162, 198, 454, 636
MvnI CGCG 5 cut(s) 208, 227, 474, 594, 650
NaeI GCCGGC 1 cut(s) 562
NciI CCSGG 5 cut(s) 161, 162, 198, 454, 636
NdeII GATC 5 cut(s) 26, 147, 269, 323, 537
NgoMIV GCCGGC 1 cut(s) 560
NlaIV GGNNCC 5 cut(s) 84, 276, 277, 325, 503
NmeAIII GCCGAG 2 cut(s) 540, 595
NmuCI GTSAC 1 cut(s) 644
PacI TTAATTAA 1 cut(s) 108
PaeR7I CTCGAG 1 cut(s) 237
PaqCI CACCTGC 1 cut(s) 680
PciSI GCTCTTC 2 cut(s) 4, 493
PcsI WCGNNNNNNNCGW 1 cut(s) 278
PdiI GCCGGC 1 cut(s) 562
PfeI GAWTC 2 cut(s) 119, 683
Ple19I CGATCG 1 cut(s) 150
PleI GAGTC 1 cut(s) 151
PpsI GAGTC 1 cut(s) 151
PpuMI RGGWCCY 1 cut(s) 275
Psp5II RGGWCCY 1 cut(s) 275
PspFI CCCAGC 1 cut(s) 286
PspN4I GGNNCC 5 cut(s) 84, 276, 277, 325, 503
PspPI GGNCC 5 cut(s) 83, 275, 429, 447, 501
PspPPI RGGWCCY 1 cut(s) 275
PspXI VCTCGAGB 1 cut(s) 237
PsuI RGATCY 2 cut(s) 323, 537
PvuI CGATCG 1 cut(s) 150
RsaI GTAC 2 cut(s) 134, 406
RsaNI GTAC 2 cut(s) 133, 405
RseI CAYNNNNRTG 1 cut(s) 91
SacII CCGCGG 1 cut(s) 228
SapI GCTCTTC 2 cut(s) 4, 493
SaqAI TTAA 3 cut(s) 104, 108, 654
Sau3AI GATC 5 cut(s) 26, 147, 269, 323, 537
Sau96I GGNCC 5 cut(s) 83, 275, 429, 447, 501
SchI GAGTC 1 cut(s) 152
ScrFI CCNGG 5 cut(s) 161, 162, 198, 454, 636
SduI GDGCHC 3 cut(s) 287, 488, 616
SfaNI GCATC 1 cut(s) 382
Sfr274I CTCGAG 1 cut(s) 237
Sfr303I CCGCGG 1 cut(s) 228
SgrBI CCGCGG 1 cut(s) 228
SinI GGWCC 4 cut(s) 83, 275, 429, 501
SlaI CTCGAG 1 cut(s) 237
SmaI CCCGGG 1 cut(s) 162
SmiMI CAYNNNNRTG 1 cut(s) 91
SmlI CTYRAG 2 cut(s) 237, 653
SmoI CTYRAG 2 cut(s) 237, 653
Sse9I AATT 1 cut(s) 105
SspMI CTAG 1 cut(s) 677
StyD4I CCNGG 5 cut(s) 159, 160, 196, 452, 634
StyI CCWWGG 1 cut(s) 380
TaiI ACGT 2 cut(s) 42, 480
TaqI TCGA 3 cut(s) 21, 146, 238
TaqII GACCGA 1 cut(s) 417
TasI AATT 1 cut(s) 105
TauI GCSGC 8 cut(s) 71, 204, 211, 227, 452, 498, 555, 594
TfiI GAWTC 2 cut(s) 119, 683
Tru1I TTAA 3 cut(s) 104, 108, 654
Tru9I TTAA 3 cut(s) 104, 108, 654
TseFI GTSAC 1 cut(s) 644
TseI GCWGC 5 cut(s) 58, 233, 242, 297, 582
Tsp45I GTSAC 1 cut(s) 644
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 120, 180, 336, 515
TspMI CCCGGG 1 cut(s) 160
Vha464I CTTAAG 1 cut(s) 653
VpaK11BI GGWCC 4 cut(s) 83, 275, 429, 501
XhoI CTCGAG 1 cut(s) 237
XmaI CCCGGG 1 cut(s) 160
XspI CTAG 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.