Rroxscaffold_21G00439620

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000021
OG0000098
Physical Location & Seq
Reverse (-)
132461 .. 133705
1245 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_21G00439620.1

Sequence Viewer

Length: 864 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGGACACCTGCGTTATCTTTTAACGTATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGGTGGGCAGGCTGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

287

Amino Acids

31.23

Weight (kDa)

11.61

Isoelectric Point (pI)

66.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 253
AatII GACGTC 1 cut(s) 850
Acc36I ACCTGC 1 cut(s) 253
AccB7I CCANNNNNTGG 1 cut(s) 763
AccBSI CCGCTC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 412
AccII CGCG 3 cut(s) 477, 496, 739
AccIII TCCGGA 2 cut(s) 701, 852
AclWI GGATC 5 cut(s) 34, 136, 319, 585, 598
AcoI YGGCCR 2 cut(s) 467, 778
AcsI RAATTY 1 cut(s) 110
AcyI GRCGYC 1 cut(s) 847
AfaI GTAC 3 cut(s) 163, 400, 673
AfiI CCNNNNNNNGG 8 cut(s) 347, 372, 465, 469, 476, 763, 776, 798
AgsI TTSAA 2 cut(s) 421, 711
AjiI CACGTC 1 cut(s) 743
AluBI AGCT 4 cut(s) 105, 186, 229, 505
AluI AGCT 4 cut(s) 105, 186, 229, 505
Alw21I GWGCWC 2 cut(s) 231, 753
Alw26I GTCTC 2 cut(s) 646, 854
AlwI GGATC 5 cut(s) 34, 136, 319, 585, 598
AlwNI CAGNNNCTG 2 cut(s) 639, 763
Ama87I CYCGRG 5 cut(s) 406, 426, 506, 579, 831
Aor13HI TCCGGA 2 cut(s) 701, 852
AoxI GGCC 5 cut(s) 136, 467, 714, 778, 835
ApeKI GCWGC 3 cut(s) 58, 502, 564
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 726
AspS9I GGNCC 6 cut(s) 338, 544, 696, 714, 766, 836
AsuC2I CCSGG 5 cut(s) 309, 427, 428, 466, 721
AsuHPI GGTGA 2 cut(s) 508, 636
AvaI CYCGRG 5 cut(s) 406, 426, 506, 579, 831
AvaII GGWCC 4 cut(s) 338, 544, 696, 766
BaeGI GKGCMC 2 cut(s) 359, 555
BamHI GGATCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 293
Bbv12I GWGCWC 2 cut(s) 231, 753
BbvI GCAGC 3 cut(s) 45, 514, 576
BceAI ACGGC 1 cut(s) 770
BcnI CCSGG 5 cut(s) 309, 427, 428, 466, 721
BcoDI GTCTC 2 cut(s) 646, 854
BfaI CTAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 253
BisI GCNGC 8 cut(s) 59, 270, 478, 494, 503, 565, 717, 761
BlsI GCNGC 8 cut(s) 60, 271, 479, 495, 504, 566, 718, 762
Bme1390I CCNGG 5 cut(s) 309, 427, 428, 466, 721
Bme18I GGWCC 4 cut(s) 338, 544, 696, 766
BmeT110I CYCGRG 5 cut(s) 406, 426, 506, 579, 831
BmgBI CACGTC 1 cut(s) 743
BmgT120I GGNCC 6 cut(s) 338, 544, 696, 714, 766, 836
BmiI GGNNCC 6 cut(s) 339, 545, 546, 592, 768, 838
BmrFI CCNGG 5 cut(s) 309, 427, 428, 466, 721
BmrI ACTGGG 2 cut(s) 448, 550
BmsI GCATC 1 cut(s) 649
BmuI ACTGGG 2 cut(s) 448, 550
BpiI GAAGAC 1 cut(s) 293
BpuMI CCSGG 5 cut(s) 309, 427, 428, 466, 721
Bsa29I ATCGAT 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 847
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 7 cut(s) 426, 427, 464, 494, 580, 647, 832
BsaWI WCCGGW 2 cut(s) 701, 852
BsaXI ACNNNNNCTCC 2 cut(s) 758, 788
Bsc4I CCNNNNNNNGG 8 cut(s) 347, 372, 465, 469, 476, 763, 776, 798
Bse118I RCCGGY 2 cut(s) 469, 677
Bse1I ACTGG 5 cut(s) 69, 169, 454, 545, 792
BseAI TCCGGA 2 cut(s) 701, 852
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 426, 427, 464, 494, 580, 647, 832
BseLI CCNNNNNNNGG 8 cut(s) 347, 372, 465, 469, 476, 763, 776, 798
BseNI ACTGG 5 cut(s) 69, 169, 454, 545, 792
BseSI GKGCMC 2 cut(s) 359, 555
BseX3I CGGCCG 2 cut(s) 467, 778
BseXI GCAGC 3 cut(s) 45, 514, 576
BseYI CCCAGC 2 cut(s) 274, 554
Bsh1236I CGCG 3 cut(s) 477, 496, 739
Bsh1285I CGRYCG 4 cut(s) 416, 470, 678, 781
BshFI GGCC 5 cut(s) 138, 469, 716, 780, 837
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 4 cut(s) 416, 470, 678, 781
BsiHKAI GWGCWC 2 cut(s) 231, 753
BsiHKCI CYCGRG 5 cut(s) 406, 426, 506, 579, 831
BsiSI CCGG 9 cut(s) 309, 427, 466, 470, 678, 702, 720, 777, 853
BslFI GGGAC 4 cut(s) 253, 446, 551, 557
BslI CCNNNNNNNGG 8 cut(s) 347, 372, 465, 469, 476, 763, 776, 798
BsmAI GTCTC 2 cut(s) 646, 854
BsmBI CGTCTC 1 cut(s) 854
BsmFI GGGAC 4 cut(s) 253, 446, 551, 557
BsnI GGCC 5 cut(s) 138, 469, 716, 780, 837
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 5 cut(s) 406, 426, 506, 579, 831
Bsp1286I GDGCHC 4 cut(s) 231, 359, 555, 753
Bsp13I TCCGGA 2 cut(s) 701, 852
Bsp143I GATC 4 cut(s) 26, 128, 311, 590
BspANI GGCC 5 cut(s) 138, 469, 716, 780, 837
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 2 cut(s) 701, 852
BspFNI CGCG 3 cut(s) 477, 496, 739
BspLI GGNNCC 6 cut(s) 339, 545, 546, 592, 768, 838
BspMI ACCTGC 1 cut(s) 253
BspPI GGATC 5 cut(s) 34, 136, 319, 585, 598
BspQI GCTCTTC 2 cut(s) 4, 758
BspTNI GGTCTC 1 cut(s) 646
BsrBI CCGCTC 1 cut(s) 487
BsrFI RCCGGY 2 cut(s) 469, 677
BsrI ACTGG 5 cut(s) 69, 169, 454, 545, 792
BssAI RCCGGY 2 cut(s) 469, 677
BssECI CCNNGG 7 cut(s) 426, 427, 464, 494, 580, 647, 832
BssMI GATC 4 cut(s) 26, 128, 311, 590
BssNI GRCGYC 1 cut(s) 847
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 647
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 417
Bst6I CTCTTC 3 cut(s) 4, 758, 832
BstACI GRCGYC 1 cut(s) 847
BstC8I GCNNGC 4 cut(s) 319, 471, 475, 804
BstDEI CTNAG 1 cut(s) 235
BstDSI CCRYGG 1 cut(s) 494
BstFNI CGCG 3 cut(s) 477, 496, 739
BstHHI GCGC 1 cut(s) 726
BstKTI GATC 4 cut(s) 29, 131, 314, 593
BstMAI GTCTC 2 cut(s) 646, 854
BstMBI GATC 4 cut(s) 26, 128, 311, 590
BstMCI CGRYCG 4 cut(s) 416, 470, 678, 781
BstMWI GCNNNNNNNGC 9 cut(s) 50, 275, 493, 499, 502, 508, 564, 687, 757
BstSCI CCNGG 5 cut(s) 307, 425, 426, 464, 719
BstSLI GKGCMC 2 cut(s) 359, 555
BstUI CGCG 3 cut(s) 477, 496, 739
BstV1I GCAGC 3 cut(s) 45, 514, 576
BstV2I GAAGAC 1 cut(s) 293
BstX2I RGATCY 1 cut(s) 590
BstYI RGATCY 1 cut(s) 590
BstZI CGGCCG 2 cut(s) 467, 778
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 5 cut(s) 138, 469, 716, 780, 837
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 494
BtrI CACGTC 1 cut(s) 743
BtsI GCAGTG 2 cut(s) 334, 359
BtsIMutI CAGTG 3 cut(s) 334, 359, 799
BveI ACCTGC 1 cut(s) 253
Cac8I GCNNGC 4 cut(s) 319, 471, 475, 804
CaiI CAGNNNCTG 2 cut(s) 639, 763
CfoI GCGC 1 cut(s) 726
Cfr10I RCCGGY 2 cut(s) 469, 677
Cfr13I GGNCC 6 cut(s) 338, 544, 696, 714, 766, 836
Cfr42I CCGCGG 1 cut(s) 497
Cfr9I CCCGGG 1 cut(s) 426
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 399, 672
CviQI GTAC 3 cut(s) 162, 399, 672
DdeI CTNAG 1 cut(s) 235
DpnI GATC 4 cut(s) 28, 130, 313, 592
DpnII GATC 4 cut(s) 26, 128, 311, 590
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 2 cut(s) 467, 778
EagI CGGCCG 2 cut(s) 467, 778
Eam1104I CTCTTC 3 cut(s) 4, 758, 832
EarI CTCTTC 3 cut(s) 4, 758, 832
EciI GGCGGA 1 cut(s) 294
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 2 cut(s) 467, 778
Eco130I CCWWGG 1 cut(s) 647
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 646
Eco47I GGWCC 4 cut(s) 338, 544, 696, 766
Eco52I CGGCCG 2 cut(s) 467, 778
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 5 cut(s) 406, 426, 506, 579, 831
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 2 cut(s) 544, 836
EcoT14I CCWWGG 1 cut(s) 647
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 647
Esp3I CGTCTC 1 cut(s) 854
FaiI YATR 3 cut(s) 47, 265, 668
FalI AAGNNNNNCTT 2 cut(s) 316, 348
FaqI GGGAC 4 cut(s) 253, 446, 551, 557
FauI CCCGC 4 cut(s) 326, 367, 492, 848
FblI GTMKAC 1 cut(s) 412
Fnu4HI GCNGC 8 cut(s) 59, 270, 478, 494, 503, 565, 717, 761
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 8 cut(s) 59, 270, 478, 494, 503, 565, 717, 761
FspBI CTAG 1 cut(s) 102
GlaI GCGC 1 cut(s) 725
GluI GCNGC 8 cut(s) 59, 270, 478, 494, 503, 565, 717, 761
GsaI CCCAGC 2 cut(s) 278, 558
HaeIII GGCC 5 cut(s) 138, 469, 716, 780, 837
HapII CCGG 9 cut(s) 309, 427, 466, 470, 678, 702, 720, 777, 853
HhaI GCGC 1 cut(s) 726
Hin1I GRCGYC 1 cut(s) 847
Hin6I GCGC 1 cut(s) 724
HinP1I GCGC 1 cut(s) 724
HincII GTYRAC 1 cut(s) 413
HindII GTYRAC 1 cut(s) 413
HinfI GANTC 5 cut(s) 175, 368, 385, 409, 856
HpaII CCGG 9 cut(s) 309, 427, 466, 470, 678, 702, 720, 777, 853
HphI GGTGA 2 cut(s) 508, 636
Hpy166II GTNNAC 3 cut(s) 413, 516, 644
Hpy188I TCNGA 4 cut(s) 94, 174, 367, 384
Hpy188III TCNNGA 5 cut(s) 536, 579, 702, 831, 853
Hpy8I GTNNAC 3 cut(s) 413, 516, 644
Hpy99I CGWCG 4 cut(s) 44, 531, 744, 849
HpyAV CCTTC 2 cut(s) 17, 436
HpyCH4III ACNGT 2 cut(s) 151, 417
HpyCH4IV ACGT 4 cut(s) 39, 261, 742, 847
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 275, 493, 499, 502, 508, 564, 687, 757
HpyF3I CTNAG 1 cut(s) 235
HpySE526I ACGT 4 cut(s) 39, 261, 742, 847
Hsp92I GRCGYC 1 cut(s) 847
HspAI GCGC 1 cut(s) 724
KflI GGGWCCC 1 cut(s) 544
Kpn2I TCCGGA 2 cut(s) 701, 852
KroI GCCGGC 1 cut(s) 469
KroNI GCCGGC 1 cut(s) 471
KspI CCGCGG 1 cut(s) 497
Kzo9I GATC 4 cut(s) 26, 128, 311, 590
LguI GCTCTTC 2 cut(s) 4, 758
LmnI GCTCC 1 cut(s) 445
Lsp1109I GCAGC 3 cut(s) 45, 514, 576
LweI GCATC 1 cut(s) 649
MaeI CTAG 1 cut(s) 102
MaeII ACGT 4 cut(s) 39, 261, 742, 847
MaeIII GTNAC 2 cut(s) 83, 584
MalI GATC 4 cut(s) 28, 130, 313, 592
MbiI CCGCTC 1 cut(s) 487
MboI GATC 4 cut(s) 26, 128, 311, 590
MboII GAAGA 4 cut(s) 21, 293, 745, 819
MflI RGATCY 1 cut(s) 590
MhlI GDGCHC 4 cut(s) 231, 359, 555, 753
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 418, 850
MnlI CCTC 9 cut(s) 109, 341, 373, 570, 575, 629, 709, 784, 827
MroI TCCGGA 2 cut(s) 701, 852
MroNI GCCGGC 1 cut(s) 469
MseI TTAA 3 cut(s) 108, 258, 810
MspA1I CMGCKG 2 cut(s) 496, 763
MspI CCGG 9 cut(s) 309, 427, 466, 470, 678, 702, 720, 777, 853
MspR9I CCNGG 5 cut(s) 309, 427, 428, 466, 721
MvnI CGCG 3 cut(s) 477, 496, 739
MwoI GCNNNNNNNGC 9 cut(s) 50, 275, 493, 499, 502, 508, 564, 687, 757
NaeI GCCGGC 1 cut(s) 471
NciI CCSGG 5 cut(s) 309, 427, 428, 466, 721
NdeII GATC 4 cut(s) 26, 128, 311, 590
NgoMIV GCCGGC 1 cut(s) 469
NlaIV GGNNCC 6 cut(s) 339, 545, 546, 592, 768, 838
NmeAIII GCCGAG 1 cut(s) 806
PaeR7I CTCGAG 1 cut(s) 506
PaqCI CACCTGC 1 cut(s) 253
PciSI GCTCTTC 2 cut(s) 4, 758
PdiI GCCGGC 1 cut(s) 471
PfeI GAWTC 3 cut(s) 175, 368, 385
PflFI GACNNNGTC 1 cut(s) 297
PflMI CCANNNNNTGG 1 cut(s) 763
PkrI GCNGC 8 cut(s) 60, 271, 479, 495, 504, 566, 718, 762
PleI GAGTC 2 cut(s) 417, 850
PpsI GAGTC 2 cut(s) 417, 850
PpuMI RGGWCCY 1 cut(s) 544
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 544
PspFI CCCAGC 2 cut(s) 274, 554
PspN4I GGNNCC 6 cut(s) 339, 545, 546, 592, 768, 838
PspPI GGNCC 6 cut(s) 338, 544, 696, 714, 766, 836
PspPPI RGGWCCY 1 cut(s) 544
PspXI VCTCGAGB 1 cut(s) 506
PstNI CAGNNNCTG 2 cut(s) 639, 763
PsuI RGATCY 1 cut(s) 590
PsyI GACNNNGTC 1 cut(s) 297
RsaI GTAC 3 cut(s) 163, 400, 673
RsaNI GTAC 3 cut(s) 162, 399, 672
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 497
SalI GTCGAC 1 cut(s) 411
SapI GCTCTTC 2 cut(s) 4, 758
SaqAI TTAA 3 cut(s) 108, 258, 810
SatI GCNGC 8 cut(s) 59, 270, 478, 494, 503, 565, 717, 761
Sau3AI GATC 4 cut(s) 26, 128, 311, 590
Sau96I GGNCC 6 cut(s) 338, 544, 696, 714, 766, 836
SchI GAGTC 2 cut(s) 418, 850
ScrFI CCNGG 5 cut(s) 309, 427, 428, 466, 721
SduI GDGCHC 4 cut(s) 231, 359, 555, 753
SfaNI GCATC 1 cut(s) 649
Sfr274I CTCGAG 1 cut(s) 506
Sfr303I CCGCGG 1 cut(s) 497
SgrBI CCGCGG 1 cut(s) 497
SinI GGWCC 4 cut(s) 338, 544, 696, 766
SlaI CTCGAG 1 cut(s) 506
SmaI CCCGGG 1 cut(s) 428
SmlI CTYRAG 1 cut(s) 506
SmoI CTYRAG 1 cut(s) 506
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 102
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 5 cut(s) 307, 425, 426, 464, 719
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 2 cut(s) 151, 417
TaiI ACGT 4 cut(s) 42, 264, 745, 850
TaqI TCGA 4 cut(s) 21, 131, 412, 507
TaqII GACCGA 1 cut(s) 684
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 272, 480, 496, 719, 763
TfiI GAWTC 3 cut(s) 175, 368, 385
Tru1I TTAA 3 cut(s) 108, 258, 810
Tru9I TTAA 3 cut(s) 108, 258, 810
TscAI CASTG 3 cut(s) 334, 359, 799
TseI GCWGC 3 cut(s) 58, 502, 564
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 386, 388, 448, 603
TspMI CCCGGG 1 cut(s) 426
TspRI CASTG 3 cut(s) 334, 359, 799
Tth111I GACNNNGTC 1 cut(s) 297
Van91I CCANNNNNTGG 1 cut(s) 763
VpaK11BI GGWCC 4 cut(s) 338, 544, 696, 766
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 506
XmaI CCCGGG 1 cut(s) 426
XmiI GTMKAC 1 cut(s) 412
XspI CTAG 1 cut(s) 102
ZraI GACGTC 1 cut(s) 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.