Rroxscaffold_17G00435760

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000017
OG0000098
Physical Location & Seq
Forward (+)
340128 .. 341169
1042 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_17G00435760.1

Sequence Viewer

Length: 660 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

219

Amino Acids

23.92

Weight (kDa)

9.5

Isoelectric Point (pI)

52.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccBSI CCGCTC 1 cut(s) 488
AccI GTMKAC 1 cut(s) 413
AccII CGCG 2 cut(s) 478, 497
AciI CCGC 8 cut(s) 269, 304, 318, 360, 478, 486, 495, 497
AclWI GGATC 5 cut(s) 34, 136, 318, 586, 599
AcoI YGGCCR 1 cut(s) 468
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 2 cut(s) 163, 400
AfiI CCNNNNNNNGG 5 cut(s) 345, 372, 466, 470, 477
AgsI TTSAA 1 cut(s) 422
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 4 cut(s) 105, 186, 229, 506
AluI AGCT 4 cut(s) 105, 186, 229, 506
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 1 cut(s) 647
AlwI GGATC 5 cut(s) 34, 136, 318, 586, 599
AlwNI CAGNNNCTG 1 cut(s) 640
Ama87I CYCGRG 4 cut(s) 427, 507, 563, 580
AoxI GGCC 2 cut(s) 136, 468
ApeKI GCWGC 2 cut(s) 58, 503
ApoI RAATTY 1 cut(s) 110
AspS9I GGNCC 2 cut(s) 336, 545
AsuC2I CCSGG 4 cut(s) 308, 428, 429, 467
AsuHPI GGTGA 2 cut(s) 509, 637
AvaI CYCGRG 4 cut(s) 427, 507, 563, 580
AvaII GGWCC 2 cut(s) 336, 545
BaeGI GKGCMC 2 cut(s) 359, 557
BamHI GGATCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 1 cut(s) 231
BbvI GCAGC 2 cut(s) 45, 515
BcnI CCSGG 4 cut(s) 308, 428, 429, 467
BcoDI GTCTC 1 cut(s) 647
BfaI CTAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 252
BisI GCNGC 5 cut(s) 59, 269, 479, 495, 504
BlsI GCNGC 5 cut(s) 60, 270, 480, 496, 505
Bme1390I CCNGG 4 cut(s) 308, 428, 429, 467
Bme18I GGWCC 2 cut(s) 336, 545
BmeT110I CYCGRG 4 cut(s) 427, 507, 563, 580
BmgT120I GGNCC 2 cut(s) 336, 545
BmiI GGNNCC 4 cut(s) 337, 546, 547, 593
BmrFI CCNGG 4 cut(s) 308, 428, 429, 467
BmrI ACTGGG 2 cut(s) 449, 551
BmuI ACTGGG 2 cut(s) 449, 551
BpiI GAAGAC 1 cut(s) 292
BpuMI CCSGG 4 cut(s) 308, 428, 429, 467
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 647
BsaJI CCNNGG 6 cut(s) 427, 428, 465, 495, 581, 648
Bsc4I CCNNNNNNNGG 5 cut(s) 345, 372, 466, 470, 477
Bse118I RCCGGY 1 cut(s) 470
Bse1I ACTGG 5 cut(s) 69, 169, 402, 455, 546
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 6 cut(s) 427, 428, 465, 495, 581, 648
BseLI CCNNNNNNNGG 5 cut(s) 345, 372, 466, 470, 477
BseMII CTCAG 1 cut(s) 399
BseNI ACTGG 5 cut(s) 69, 169, 402, 455, 546
BseSI GKGCMC 2 cut(s) 359, 557
BseX3I CGGCCG 1 cut(s) 468
BseXI GCAGC 2 cut(s) 45, 515
BseYI CCCAGC 2 cut(s) 273, 556
Bsh1236I CGCG 2 cut(s) 478, 497
Bsh1285I CGRYCG 1 cut(s) 471
BshFI GGCC 2 cut(s) 138, 470
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 1 cut(s) 471
BsiHKAI GWGCWC 1 cut(s) 231
BsiHKCI CYCGRG 4 cut(s) 427, 507, 563, 580
BsiSI CCGG 4 cut(s) 308, 428, 467, 471
BslFI GGGAC 3 cut(s) 447, 552, 558
BslI CCNNNNNNNGG 5 cut(s) 345, 372, 466, 470, 477
BsmAI GTCTC 1 cut(s) 647
BsmFI GGGAC 3 cut(s) 447, 552, 558
BsnI GGCC 2 cut(s) 138, 470
Bso31I GGTCTC 1 cut(s) 647
BsoBI CYCGRG 4 cut(s) 427, 507, 563, 580
Bsp1286I GDGCHC 3 cut(s) 231, 359, 557
Bsp143I GATC 4 cut(s) 26, 128, 310, 591
BspACI CCGC 8 cut(s) 269, 304, 318, 360, 478, 486, 495, 497
BspANI GGCC 2 cut(s) 138, 470
BspCNI CTCAG 1 cut(s) 400
BspDI ATCGAT 1 cut(s) 131
BspFNI CGCG 2 cut(s) 478, 497
BspLI GGNNCC 4 cut(s) 337, 546, 547, 593
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 586, 599
BspQI GCTCTTC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 647
BsrBI CCGCTC 1 cut(s) 488
BsrFI RCCGGY 1 cut(s) 470
BsrI ACTGG 5 cut(s) 69, 169, 402, 455, 546
BssAI RCCGGY 1 cut(s) 470
BssECI CCNNGG 6 cut(s) 427, 428, 465, 495, 581, 648
BssMI GATC 4 cut(s) 26, 128, 310, 591
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 648
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 418
Bst6I CTCTTC 1 cut(s) 4
BstC8I GCNNGC 4 cut(s) 318, 328, 472, 476
BstDEI CTNAG 2 cut(s) 235, 408
BstDSI CCRYGG 1 cut(s) 495
BstFNI CGCG 2 cut(s) 478, 497
BstKTI GATC 4 cut(s) 29, 131, 313, 594
BstMAI GTCTC 1 cut(s) 647
BstMBI GATC 4 cut(s) 26, 128, 310, 591
BstMCI CGRYCG 1 cut(s) 471
BstMWI GCNNNNNNNGC 6 cut(s) 50, 274, 494, 500, 503, 509
BstSCI CCNGG 4 cut(s) 306, 426, 427, 465
BstSLI GKGCMC 2 cut(s) 359, 557
BstUI CGCG 2 cut(s) 478, 497
BstV1I GCAGC 2 cut(s) 45, 515
BstV2I GAAGAC 1 cut(s) 292
BstX2I RGATCY 1 cut(s) 591
BstYI RGATCY 1 cut(s) 591
BstZI CGGCCG 1 cut(s) 468
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 2 cut(s) 138, 470
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 495
BtsI GCAGTG 1 cut(s) 359
BtsIMutI CAGTG 1 cut(s) 359
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 318, 328, 472, 476
CaiI CAGNNNCTG 1 cut(s) 640
Cfr10I RCCGGY 1 cut(s) 470
Cfr13I GGNCC 2 cut(s) 336, 545
Cfr42I CCGCGG 1 cut(s) 498
Cfr9I CCCGGG 1 cut(s) 427
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 2 cut(s) 162, 399
CviQI GTAC 2 cut(s) 162, 399
DdeI CTNAG 2 cut(s) 235, 408
DpnI GATC 4 cut(s) 28, 130, 312, 593
DpnII GATC 4 cut(s) 26, 128, 310, 591
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 468
EagI CGGCCG 1 cut(s) 468
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 468
Eco130I CCWWGG 1 cut(s) 648
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 647
Eco47I GGWCC 2 cut(s) 336, 545
Eco52I CGGCCG 1 cut(s) 468
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 427, 507, 563, 580
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 545
EcoT14I CCWWGG 1 cut(s) 648
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 648
FaiI YATR 1 cut(s) 47
FaqI GGGAC 3 cut(s) 447, 552, 558
FauI CCCGC 3 cut(s) 325, 367, 493
FblI GTMKAC 1 cut(s) 413
Fnu4HI GCNGC 5 cut(s) 59, 269, 479, 495, 504
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 5 cut(s) 59, 269, 479, 495, 504
FspBI CTAG 1 cut(s) 102
GluI GCNGC 5 cut(s) 59, 269, 479, 495, 504
GsaI CCCAGC 2 cut(s) 277, 560
HaeIII GGCC 2 cut(s) 138, 470
HapII CCGG 4 cut(s) 308, 428, 467, 471
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HinfI GANTC 4 cut(s) 175, 368, 385, 410
HpaII CCGG 4 cut(s) 308, 428, 467, 471
HphI GGTGA 2 cut(s) 509, 637
Hpy166II GTNNAC 3 cut(s) 414, 517, 645
Hpy188I TCNGA 5 cut(s) 94, 174, 367, 384, 409
Hpy188III TCNNGA 2 cut(s) 537, 580
Hpy8I GTNNAC 3 cut(s) 414, 517, 645
Hpy99I CGWCG 2 cut(s) 44, 532
HpyAV CCTTC 2 cut(s) 17, 437
HpyCH4III ACNGT 2 cut(s) 151, 418
HpyCH4IV ACGT 1 cut(s) 39
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 274, 494, 500, 503, 509
HpyF3I CTNAG 2 cut(s) 235, 408
HpySE526I ACGT 1 cut(s) 39
KflI GGGWCCC 1 cut(s) 545
KroI GCCGGC 1 cut(s) 470
KroNI GCCGGC 1 cut(s) 472
KspI CCGCGG 1 cut(s) 498
Kzo9I GATC 4 cut(s) 26, 128, 310, 591
LguI GCTCTTC 1 cut(s) 4
LmnI GCTCC 1 cut(s) 446
Lsp1109I GCAGC 2 cut(s) 45, 515
MaeI CTAG 1 cut(s) 102
MaeII ACGT 1 cut(s) 39
MaeIII GTNAC 2 cut(s) 83, 585
MalI GATC 4 cut(s) 28, 130, 312, 593
MbiI CCGCTC 1 cut(s) 488
MboI GATC 4 cut(s) 26, 128, 310, 591
MboII GAAGA 2 cut(s) 21, 292
MflI RGATCY 1 cut(s) 591
MhlI GDGCHC 3 cut(s) 231, 359, 557
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 419
MnlI CCTC 6 cut(s) 109, 339, 373, 572, 576, 630
MroNI GCCGGC 1 cut(s) 470
MseI TTAA 2 cut(s) 108, 257
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 4 cut(s) 308, 428, 467, 471
MspR9I CCNGG 4 cut(s) 308, 428, 429, 467
MvnI CGCG 2 cut(s) 478, 497
MwoI GCNNNNNNNGC 6 cut(s) 50, 274, 494, 500, 503, 509
NaeI GCCGGC 1 cut(s) 472
NciI CCSGG 4 cut(s) 308, 428, 429, 467
NdeII GATC 4 cut(s) 26, 128, 310, 591
NgoMIV GCCGGC 1 cut(s) 470
NlaIV GGNNCC 4 cut(s) 337, 546, 547, 593
PaeR7I CTCGAG 2 cut(s) 507, 563
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 1 cut(s) 4
PdiI GCCGGC 1 cut(s) 472
PfeI GAWTC 3 cut(s) 175, 368, 385
PflFI GACNNNGTC 1 cut(s) 296
PkrI GCNGC 5 cut(s) 60, 270, 480, 496, 505
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PpuMI RGGWCCY 1 cut(s) 545
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 545
PspFI CCCAGC 2 cut(s) 273, 556
PspN4I GGNNCC 4 cut(s) 337, 546, 547, 593
PspPI GGNCC 2 cut(s) 336, 545
PspPPI RGGWCCY 1 cut(s) 545
PspXI VCTCGAGB 2 cut(s) 507, 563
PstNI CAGNNNCTG 1 cut(s) 640
PsuI RGATCY 1 cut(s) 591
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 2 cut(s) 163, 400
RsaNI GTAC 2 cut(s) 162, 399
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 498
SalI GTCGAC 1 cut(s) 412
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 2 cut(s) 108, 257
SatI GCNGC 5 cut(s) 59, 269, 479, 495, 504
Sau3AI GATC 4 cut(s) 26, 128, 310, 591
Sau96I GGNCC 2 cut(s) 336, 545
SchI GAGTC 1 cut(s) 419
ScrFI CCNGG 4 cut(s) 308, 428, 429, 467
SduI GDGCHC 3 cut(s) 231, 359, 557
Sfr274I CTCGAG 2 cut(s) 507, 563
Sfr303I CCGCGG 1 cut(s) 498
SgrBI CCGCGG 1 cut(s) 498
SinI GGWCC 2 cut(s) 336, 545
SlaI CTCGAG 2 cut(s) 507, 563
SmaI CCCGGG 1 cut(s) 429
SmlI CTYRAG 2 cut(s) 507, 563
SmoI CTYRAG 2 cut(s) 507, 563
Sse9I AATT 1 cut(s) 110
SsiI CCGC 8 cut(s) 269, 304, 318, 360, 478, 486, 495, 497
SspMI CTAG 1 cut(s) 102
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 4 cut(s) 306, 426, 427, 465
StyI CCWWGG 1 cut(s) 648
TaaI ACNGT 2 cut(s) 151, 418
TaiI ACGT 1 cut(s) 42
TaqI TCGA 5 cut(s) 21, 131, 413, 508, 564
TasI AATT 1 cut(s) 110
TauI GCSGC 3 cut(s) 271, 481, 497
TfiI GAWTC 3 cut(s) 175, 368, 385
Tru1I TTAA 2 cut(s) 108, 257
Tru9I TTAA 2 cut(s) 108, 257
TscAI CASTG 1 cut(s) 359
TseI GCWGC 2 cut(s) 58, 503
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 386, 388, 449, 604
TspMI CCCGGG 1 cut(s) 427
TspRI CASTG 1 cut(s) 359
Tth111I GACNNNGTC 1 cut(s) 296
VpaK11BI GGWCC 2 cut(s) 336, 545
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 507, 563
XmaI CCCGGG 1 cut(s) 427
XmiI GTMKAC 1 cut(s) 413
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.