Rroxscaffold_52G00439310

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000052
OG0000098
Physical Location & Seq
Forward (+)
10782 .. 12092
1311 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_52G00439310.1

Sequence Viewer

Length: 858 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAACATCGGCAGAAATCACATTGCGTTAACATCCGCAGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCGTGGTGGGCAGGCTGTTAAACAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGGTTCGCGCGAGACGCGCTATCGACGGGTTACCCGCCCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTCGGCACTTGCCCCGACGGCCGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

285

Amino Acids

31.09

Weight (kDa)

10.49

Isoelectric Point (pI)

69.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 824
AatII GACGTC 1 cut(s) 477
Acc36I ACCTGC 1 cut(s) 824
AccBSI CCGCTC 2 cut(s) 256, 698
AccI GTMKAC 1 cut(s) 182
AccII CGCG 8 cut(s) 246, 265, 369, 551, 553, 560, 738, 794
AccIII TCCGGA 1 cut(s) 330
AclI AACGTT 1 cut(s) 491
AclWI GGATC 2 cut(s) 23, 595
AcoI YGGCCR 4 cut(s) 236, 407, 693, 777
AcsI RAATTY 1 cut(s) 523
AcyI GRCGYC 1 cut(s) 474
AfaI GTAC 2 cut(s) 170, 302
AflII CTTAAG 1 cut(s) 797
AgsI TTSAA 4 cut(s) 191, 340, 645, 659
AjiI CACGTC 2 cut(s) 373, 510
AluBI AGCT 1 cut(s) 274
AluI AGCT 1 cut(s) 274
Alw21I GWGCWC 1 cut(s) 383
Alw26I GTCTC 2 cut(s) 481, 549
AlwI GGATC 2 cut(s) 23, 595
Ama87I CYCGRG 4 cut(s) 176, 196, 275, 458
Aor13HI TCCGGA 1 cut(s) 330
AoxI GGCC 8 cut(s) 236, 343, 407, 462, 638, 693, 756, 777
ApeKI GCWGC 2 cut(s) 271, 726
ApoI RAATTY 1 cut(s) 523
AspLEI GCGC 6 cut(s) 356, 553, 562, 740, 796, 804
AspS9I GGNCC 7 cut(s) 40, 119, 325, 343, 395, 463, 756
AsuC2I CCSGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
AsuHPI GGTGA 2 cut(s) 277, 848
AvaI CYCGRG 4 cut(s) 176, 196, 275, 458
AvaII GGWCC 4 cut(s) 40, 119, 325, 395
AxyI CCTNAGG 1 cut(s) 583
BaeGI GKGCMC 1 cut(s) 62
Bbv12I GWGCWC 1 cut(s) 383
BbvI GCAGC 2 cut(s) 283, 738
BccI CCATC 2 cut(s) 130, 813
BceAI ACGGC 5 cut(s) 399, 481, 596, 708, 792
BcgI CGANNNNNNTGC 2 cut(s) 105, 139
BcnI CCSGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
BcoDI GTCTC 2 cut(s) 481, 549
BfaI CTAG 1 cut(s) 821
BfoI RGCGCY 1 cut(s) 805
BfrI CTTAAG 1 cut(s) 797
BfuAI ACCTGC 1 cut(s) 824
BglI GCCNNNNNGGC 2 cut(s) 351, 776
BglII AGATCT 1 cut(s) 680
BisI GCNGC 8 cut(s) 247, 263, 272, 346, 390, 696, 727, 736
BlsI GCNGC 8 cut(s) 248, 264, 273, 347, 391, 697, 728, 737
Bme1390I CCNGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
Bme18I GGWCC 4 cut(s) 40, 119, 325, 395
BmeT110I CYCGRG 4 cut(s) 176, 196, 275, 458
BmgBI CACGTC 2 cut(s) 373, 510
BmgT120I GGNCC 7 cut(s) 40, 119, 325, 343, 395, 463, 756
BmiI GGNNCC 5 cut(s) 41, 397, 465, 624, 757
BmrFI CCNGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
BmrI ACTGGG 1 cut(s) 217
BmuI ACTGGG 1 cut(s) 217
BpuMI CCSGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
BsaHI GRCGYC 1 cut(s) 474
BsaJI CCNNGG 7 cut(s) 196, 233, 263, 349, 421, 459, 759
BsaWI WCCGGW 1 cut(s) 330
BsaXI ACNNNNNCTCC 4 cut(s) 387, 417, 682, 712
Bse118I RCCGGY 4 cut(s) 25, 238, 306, 779
Bse1I ACTGG 1 cut(s) 223
Bse21I CCTNAGG 1 cut(s) 583
Bse3DI GCAATG 2 cut(s) 99, 134
BseAI TCCGGA 1 cut(s) 330
BseDI CCNNGG 7 cut(s) 196, 233, 263, 349, 421, 459, 759
BseGI GGATG 2 cut(s) 110, 805
BseMI GCAATG 2 cut(s) 99, 134
BseNI ACTGG 1 cut(s) 223
BseSI GKGCMC 1 cut(s) 62
BseX3I CGGCCG 4 cut(s) 236, 407, 693, 777
BseXI GCAGC 2 cut(s) 283, 738
BsgI GTGCAG 1 cut(s) 669
Bsh1236I CGCG 8 cut(s) 246, 265, 369, 551, 553, 560, 738, 794
Bsh1285I CGRYCG 7 cut(s) 186, 239, 307, 410, 696, 733, 780
BshFI GGCC 8 cut(s) 238, 345, 409, 464, 640, 695, 758, 779
BsiEI CGRYCG 7 cut(s) 186, 239, 307, 410, 696, 733, 780
BsiHKAI GWGCWC 1 cut(s) 383
BsiHKCI CYCGRG 4 cut(s) 176, 196, 275, 458
BslFI GGGAC 2 cut(s) 215, 496
BsmAI GTCTC 2 cut(s) 481, 549
BsmBI CGTCTC 2 cut(s) 481, 549
BsmFI GGGAC 2 cut(s) 215, 496
BsnI GGCC 8 cut(s) 238, 345, 409, 464, 640, 695, 758, 779
BsoBI CYCGRG 4 cut(s) 176, 196, 275, 458
Bsp1286I GDGCHC 2 cut(s) 62, 383
Bsp13I TCCGGA 1 cut(s) 330
Bsp143I GATC 3 cut(s) 15, 587, 680
BspANI GGCC 8 cut(s) 238, 345, 409, 464, 640, 695, 758, 779
BspEI TCCGGA 1 cut(s) 330
BspFNI CGCG 8 cut(s) 246, 265, 369, 551, 553, 560, 738, 794
BspLI GGNNCC 5 cut(s) 41, 397, 465, 624, 757
BspMI ACCTGC 1 cut(s) 824
BspPI GGATC 2 cut(s) 23, 595
BspQI GCTCTTC 1 cut(s) 388
BspTI CTTAAG 1 cut(s) 797
BsrBI CCGCTC 2 cut(s) 256, 698
BsrDI GCAATG 2 cut(s) 99, 134
BsrFI RCCGGY 4 cut(s) 25, 238, 306, 779
BsrI ACTGG 1 cut(s) 223
BssAI RCCGGY 4 cut(s) 25, 238, 306, 779
BssECI CCNNGG 7 cut(s) 196, 233, 263, 349, 421, 459, 759
BssMI GATC 3 cut(s) 15, 587, 680
BssNI GRCGYC 1 cut(s) 474
Bst4CI ACNGT 3 cut(s) 150, 187, 300
Bst6I CTCTTC 3 cut(s) 388, 459, 639
BstACI GRCGYC 1 cut(s) 474
BstAFI CTTAAG 1 cut(s) 797
BstC8I GCNNGC 5 cut(s) 23, 27, 240, 244, 432
BstDEI CTNAG 2 cut(s) 583, 855
BstDSI CCRYGG 2 cut(s) 263, 421
BstEII GGTNACC 1 cut(s) 572
BstF5I GGATG 2 cut(s) 110, 805
BstFNI CGCG 8 cut(s) 246, 265, 369, 551, 553, 560, 738, 794
BstH2I RGCGCY 1 cut(s) 805
BstHHI GCGC 6 cut(s) 356, 553, 562, 740, 796, 804
BstKTI GATC 3 cut(s) 18, 590, 683
BstMAI GTCTC 2 cut(s) 481, 549
BstMBI GATC 3 cut(s) 15, 587, 680
BstMCI CGRYCG 7 cut(s) 186, 239, 307, 410, 696, 733, 780
BstPI GGTNACC 1 cut(s) 572
BstSCI CCNGG 7 cut(s) 11, 195, 196, 233, 348, 512, 703
BstSLI GKGCMC 1 cut(s) 62
BstUI CGCG 8 cut(s) 246, 265, 369, 551, 553, 560, 738, 794
BstV1I GCAGC 2 cut(s) 283, 738
BstX2I RGATCY 1 cut(s) 680
BstYI RGATCY 1 cut(s) 680
BstZI CGGCCG 4 cut(s) 236, 407, 693, 777
Bsu36I CCTNAGG 1 cut(s) 583
BsuRI GGCC 8 cut(s) 238, 345, 409, 464, 640, 695, 758, 779
BtgI CCRYGG 2 cut(s) 263, 421
BtgZI GCGATG 1 cut(s) 108
BtrI CACGTC 2 cut(s) 373, 510
BtsCI GGATG 2 cut(s) 110, 805
BtsI GCAGTG 2 cut(s) 36, 62
BtsIMutI CAGTG 2 cut(s) 36, 62
BveI ACCTGC 1 cut(s) 824
Cac8I GCNNGC 5 cut(s) 23, 27, 240, 244, 432
CfoI GCGC 6 cut(s) 356, 553, 562, 740, 796, 804
Cfr10I RCCGGY 4 cut(s) 25, 238, 306, 779
Cfr13I GGNCC 7 cut(s) 40, 119, 325, 343, 395, 463, 756
Cfr42I CCGCGG 1 cut(s) 266
Cfr9I CCCGGG 1 cut(s) 196
CseI GACGC 1 cut(s) 566
Csp6I GTAC 2 cut(s) 169, 301
CviAII CATG 2 cut(s) 600, 619
CviQI GTAC 2 cut(s) 169, 301
DdeI CTNAG 2 cut(s) 583, 855
DpnI GATC 3 cut(s) 17, 589, 682
DpnII GATC 3 cut(s) 15, 587, 680
EaeI YGGCCR 4 cut(s) 236, 407, 693, 777
EagI CGGCCG 4 cut(s) 236, 407, 693, 777
Eam1104I CTCTTC 3 cut(s) 388, 459, 639
EarI CTCTTC 3 cut(s) 388, 459, 639
EciI GGCGGA 2 cut(s) 376, 690
EclXI CGGCCG 4 cut(s) 236, 407, 693, 777
Eco47I GGWCC 4 cut(s) 40, 119, 325, 395
Eco52I CGGCCG 4 cut(s) 236, 407, 693, 777
Eco81I CCTNAGG 1 cut(s) 583
Eco88I CYCGRG 4 cut(s) 176, 196, 275, 458
Eco91I GGTNACC 1 cut(s) 572
EcoO109I RGGNCCY 2 cut(s) 463, 756
EcoO65I GGTNACC 1 cut(s) 572
Esp3I CGTCTC 2 cut(s) 481, 549
FaeI CATG 2 cut(s) 603, 622
FaiI YATR 3 cut(s) 601, 620, 785
FaqI GGGAC 2 cut(s) 215, 496
FatI CATG 2 cut(s) 599, 618
FauI CCCGC 5 cut(s) 30, 70, 261, 475, 585
FblI GTMKAC 1 cut(s) 182
Fnu4HI GCNGC 8 cut(s) 247, 263, 272, 346, 390, 696, 727, 736
FokI GGATG 2 cut(s) 97, 792
Fsp4HI GCNGC 8 cut(s) 247, 263, 272, 346, 390, 696, 727, 736
FspBI CTAG 1 cut(s) 821
GlaI GCGC 6 cut(s) 355, 552, 561, 739, 795, 803
GluI GCNGC 8 cut(s) 247, 263, 272, 346, 390, 696, 727, 736
HaeII RGCGCY 1 cut(s) 805
HaeIII GGCC 8 cut(s) 238, 345, 409, 464, 640, 695, 758, 779
HgaI GACGC 1 cut(s) 566
HhaI GCGC 6 cut(s) 356, 553, 562, 740, 796, 804
Hin1I GRCGYC 1 cut(s) 474
Hin1II CATG 2 cut(s) 603, 622
Hin6I GCGC 6 cut(s) 354, 551, 560, 738, 794, 802
HinP1I GCGC 6 cut(s) 354, 551, 560, 738, 794, 802
HincII GTYRAC 3 cut(s) 108, 183, 501
HindII GTYRAC 3 cut(s) 108, 183, 501
HinfI GANTC 6 cut(s) 71, 155, 179, 482, 535, 827
HpaI GTTAAC 1 cut(s) 108
HphI GGTGA 2 cut(s) 277, 848
Hpy166II GTNNAC 5 cut(s) 108, 183, 285, 501, 616
Hpy188I TCNGA 3 cut(s) 70, 154, 481
Hpy188III TCNNGA 3 cut(s) 331, 458, 520
Hpy8I GTNNAC 5 cut(s) 108, 183, 285, 501, 616
Hpy99I CGWCG 6 cut(s) 300, 374, 476, 571, 694, 778
HpyAV CCTTC 2 cut(s) 205, 651
HpyCH4III ACNGT 3 cut(s) 150, 187, 300
HpyCH4IV ACGT 4 cut(s) 372, 474, 491, 509
HpyCH4V TGCA 3 cut(s) 605, 686, 726
HpyF3I CTNAG 2 cut(s) 583, 855
HpySE526I ACGT 4 cut(s) 372, 474, 491, 509
Hsp92I GRCGYC 1 cut(s) 474
Hsp92II CATG 2 cut(s) 603, 622
HspAI GCGC 6 cut(s) 354, 551, 560, 738, 794, 802
Kpn2I TCCGGA 1 cut(s) 330
KroI GCCGGC 2 cut(s) 25, 238
KroNI GCCGGC 2 cut(s) 27, 240
KspAI GTTAAC 1 cut(s) 108
KspI CCGCGG 1 cut(s) 266
Kzo9I GATC 3 cut(s) 15, 587, 680
LguI GCTCTTC 1 cut(s) 388
LmnI GCTCC 2 cut(s) 214, 703
Lsp1109I GCAGC 2 cut(s) 283, 738
MaeI CTAG 1 cut(s) 821
MaeII ACGT 4 cut(s) 372, 474, 491, 509
MaeIII GTNAC 3 cut(s) 572, 788, 843
MalI GATC 3 cut(s) 17, 589, 682
MbiI CCGCTC 2 cut(s) 256, 698
MboI GATC 3 cut(s) 15, 587, 680
MboII GAAGA 3 cut(s) 375, 446, 626
MflI RGATCY 1 cut(s) 680
MhlI GDGCHC 2 cut(s) 62, 383
MluCI AATT 2 cut(s) 141, 523
MlyI GAGTC 2 cut(s) 188, 476
MmeI TCCRAC 2 cut(s) 132, 504
MnlI CCTC 8 cut(s) 43, 76, 338, 413, 454, 642, 752, 769
MroI TCCGGA 1 cut(s) 330
MroNI GCCGGC 2 cut(s) 25, 238
MseI TTAA 6 cut(s) 107, 140, 144, 438, 528, 798
MslI CAYNNNNRTG 1 cut(s) 127
MspA1I CMGCKG 2 cut(s) 265, 392
MspCI CTTAAG 1 cut(s) 797
MspR9I CCNGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
MvnI CGCG 8 cut(s) 246, 265, 369, 551, 553, 560, 738, 794
NaeI GCCGGC 2 cut(s) 27, 240
NciI CCSGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
NdeII GATC 3 cut(s) 15, 587, 680
NgoMIV GCCGGC 2 cut(s) 25, 238
NlaIII CATG 2 cut(s) 603, 622
NlaIV GGNNCC 5 cut(s) 41, 397, 465, 624, 757
NmeAIII GCCGAG 2 cut(s) 435, 740
NmuCI GTSAC 1 cut(s) 788
PacI TTAATTAA 1 cut(s) 144
PaeR7I CTCGAG 1 cut(s) 275
PaqCI CACCTGC 1 cut(s) 824
PciSI GCTCTTC 1 cut(s) 388
PcsI WCGNNNNNNNCGW 1 cut(s) 550
PdiI GCCGGC 2 cut(s) 27, 240
PfeI GAWTC 4 cut(s) 71, 155, 535, 827
PkrI GCNGC 8 cut(s) 248, 264, 273, 347, 391, 697, 728, 737
PleI GAGTC 2 cut(s) 187, 476
PpsI GAGTC 2 cut(s) 187, 476
Psp1406I AACGTT 1 cut(s) 491
PspEI GGTNACC 1 cut(s) 572
PspN4I GGNNCC 5 cut(s) 41, 397, 465, 624, 757
PspPI GGNCC 7 cut(s) 40, 119, 325, 343, 395, 463, 756
PspXI VCTCGAGB 1 cut(s) 275
PsuI RGATCY 1 cut(s) 680
RsaI GTAC 2 cut(s) 170, 302
RsaNI GTAC 2 cut(s) 169, 301
RseI CAYNNNNRTG 1 cut(s) 127
SacII CCGCGG 1 cut(s) 266
SalI GTCGAC 1 cut(s) 181
SapI GCTCTTC 1 cut(s) 388
SaqAI TTAA 6 cut(s) 107, 140, 144, 438, 528, 798
SatI GCNGC 8 cut(s) 247, 263, 272, 346, 390, 696, 727, 736
Sau3AI GATC 3 cut(s) 15, 587, 680
Sau96I GGNCC 7 cut(s) 40, 119, 325, 343, 395, 463, 756
SchI GAGTC 2 cut(s) 188, 476
ScrFI CCNGG 7 cut(s) 13, 197, 198, 235, 350, 514, 705
SduI GDGCHC 2 cut(s) 62, 383
SetI ASST 9 cut(s) 276, 375, 405, 477, 494, 512, 628, 790, 838
Sfr274I CTCGAG 1 cut(s) 275
Sfr303I CCGCGG 1 cut(s) 266
SgrBI CCGCGG 1 cut(s) 266
SinI GGWCC 4 cut(s) 40, 119, 325, 395
SlaI CTCGAG 1 cut(s) 275
SmaI CCCGGG 1 cut(s) 198
SmiMI CAYNNNNRTG 1 cut(s) 127
SmlI CTYRAG 2 cut(s) 275, 797
SmoI CTYRAG 2 cut(s) 275, 797
Sse9I AATT 2 cut(s) 141, 523
SspI AATATT 1 cut(s) 662
SspMI CTAG 1 cut(s) 821
StyD4I CCNGG 7 cut(s) 11, 195, 196, 233, 348, 512, 703
TaaI ACNGT 3 cut(s) 150, 187, 300
TaiI ACGT 4 cut(s) 375, 477, 494, 512
TaqI TCGA 4 cut(s) 182, 276, 566, 590
TaqII GACCGA 1 cut(s) 313
TasI AATT 2 cut(s) 141, 523
TauI GCSGC 6 cut(s) 249, 265, 348, 392, 698, 738
TfiI GAWTC 4 cut(s) 71, 155, 535, 827
Tru1I TTAA 6 cut(s) 107, 140, 144, 438, 528, 798
Tru9I TTAA 6 cut(s) 107, 140, 144, 438, 528, 798
TscAI CASTG 2 cut(s) 36, 62
TseFI GTSAC 1 cut(s) 788
TseI GCWGC 2 cut(s) 271, 726
Tsp45I GTSAC 1 cut(s) 788
TspGWI ACGGA 4 cut(s) 91, 156, 217, 410
TspMI CCCGGG 1 cut(s) 196
TspRI CASTG 2 cut(s) 36, 62
Vha464I CTTAAG 1 cut(s) 797
VpaK11BI GGWCC 4 cut(s) 40, 119, 325, 395
XapI RAATTY 1 cut(s) 523
XhoI CTCGAG 1 cut(s) 275
XmaI CCCGGG 1 cut(s) 196
XmiI GTMKAC 1 cut(s) 182
XspI CTAG 1 cut(s) 821
ZraI GACGTC 1 cut(s) 475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.