Rroxscaffold_1G00000020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000098
Physical Location & Seq
Forward (+)
18632 .. 19874
1243 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00000020.1

Sequence Viewer

Length: 750 bp
ATGTCTTCCGCCCGGATCAGCCCGCCGGCTGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAACTTCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGATCGGGACCCCCGTCGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCTGTGGTGGGCAGTCGTTAAACGTAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGAATTTTAACCCGATTCCCTTTTCGGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCCGCACCGACGGCCGCTCCGCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTCGGCACTTGCCCCGACGGCCGGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

249

Amino Acids

26.96

Weight (kDa)

11.71

Isoelectric Point (pI)

76.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 439
AccBSI CCGCTC 2 cut(s) 165, 662
AccI GTMKAC 1 cut(s) 92
AccII CGCG 7 cut(s) 155, 174, 329, 513, 515, 522, 701
AccIII TCCGGA 1 cut(s) 290
AclI AACGTT 1 cut(s) 453
AclWI GGATC 4 cut(s) 23, 222, 559, 639
AcoI YGGCCR 3 cut(s) 146, 657, 740
AcsI RAATTY 1 cut(s) 484
AcyI GRCGYC 1 cut(s) 436
AfaI GTAC 1 cut(s) 262
AfiI CCNNNNNNNGG 7 cut(s) 49, 75, 144, 353, 387, 475, 742
AgsI TTSAA 4 cut(s) 101, 300, 609, 623
AjiI CACGTC 2 cut(s) 333, 472
AluBI AGCT 1 cut(s) 182
AluI AGCT 1 cut(s) 182
Alw21I GWGCWC 1 cut(s) 343
Alw26I GTCTC 3 cut(s) 235, 443, 511
AlwI GGATC 4 cut(s) 23, 222, 559, 639
Ama87I CYCGRG 3 cut(s) 106, 183, 420
Aor13HI TCCGGA 1 cut(s) 290
AoxI GGCC 7 cut(s) 146, 303, 424, 602, 657, 719, 740
ApeKI GCWGC 2 cut(s) 179, 689
ApoI RAATTY 1 cut(s) 484
Asp700I GAANNNNTTC 1 cut(s) 83
AspLEI GCGC 4 cut(s) 316, 515, 524, 703
AspS9I GGNCC 7 cut(s) 40, 220, 285, 303, 356, 425, 719
AsuC2I CCSGG 6 cut(s) 13, 107, 108, 145, 310, 476
AsuHPI GGTGA 2 cut(s) 185, 225
AvaI CYCGRG 3 cut(s) 106, 183, 420
AvaII GGWCC 4 cut(s) 40, 220, 285, 356
BaeGI GKGCMC 1 cut(s) 62
Bbv12I GWGCWC 1 cut(s) 343
BbvI GCAGC 2 cut(s) 191, 701
BceAI ACGGC 4 cut(s) 359, 443, 560, 672
BcnI CCSGG 6 cut(s) 13, 107, 108, 145, 310, 476
BcoDI GTCTC 3 cut(s) 235, 443, 511
BglI GCCNNNNNGGC 2 cut(s) 311, 739
BisI GCNGC 9 cut(s) 149, 156, 172, 180, 306, 351, 660, 690, 699
BlsI GCNGC 9 cut(s) 150, 157, 173, 181, 307, 352, 661, 691, 700
Bme1390I CCNGG 6 cut(s) 13, 107, 108, 145, 310, 476
Bme18I GGWCC 4 cut(s) 40, 220, 285, 356
BmeT110I CYCGRG 3 cut(s) 106, 183, 420
BmgBI CACGTC 2 cut(s) 333, 472
BmgT120I GGNCC 7 cut(s) 40, 220, 285, 303, 356, 425, 719
BmiI GGNNCC 7 cut(s) 41, 221, 222, 358, 427, 588, 720
BmrFI CCNGG 6 cut(s) 13, 107, 108, 145, 310, 476
BmrI ACTGGG 1 cut(s) 127
BmsI GCATC 1 cut(s) 238
BmuI ACTGGG 1 cut(s) 127
BoxI GACNNNNGTC 1 cut(s) 225
BpuMI CCSGG 6 cut(s) 13, 107, 108, 145, 310, 476
BsaHI GRCGYC 1 cut(s) 436
BsaI GGTCTC 1 cut(s) 235
BsaJI CCNNGG 6 cut(s) 106, 143, 236, 309, 421, 722
BsaWI WCCGGW 1 cut(s) 290
BsaXI ACNNNNNCTCC 4 cut(s) 348, 378, 646, 676
Bsc4I CCNNNNNNNGG 7 cut(s) 49, 75, 144, 353, 387, 475, 742
Bse118I RCCGGY 4 cut(s) 25, 266, 667, 742
Bse1I ACTGG 1 cut(s) 133
BseAI TCCGGA 1 cut(s) 290
BseDI CCNNGG 6 cut(s) 106, 143, 236, 309, 421, 722
BseLI CCNNNNNNNGG 7 cut(s) 49, 75, 144, 353, 387, 475, 742
BseNI ACTGG 1 cut(s) 133
BseSI GKGCMC 1 cut(s) 62
BseX3I CGGCCG 3 cut(s) 146, 657, 740
BseXI GCAGC 2 cut(s) 191, 701
Bsh1236I CGCG 7 cut(s) 155, 174, 329, 513, 515, 522, 701
Bsh1285I CGRYCG 6 cut(s) 96, 149, 267, 660, 696, 743
BshFI GGCC 7 cut(s) 148, 305, 426, 604, 659, 721, 742
BsiEI CGRYCG 6 cut(s) 96, 149, 267, 660, 696, 743
BsiHKAI GWGCWC 1 cut(s) 343
BsiHKCI CYCGRG 3 cut(s) 106, 183, 420
BslFI GGGAC 3 cut(s) 125, 233, 458
BslI CCNNNNNNNGG 7 cut(s) 49, 75, 144, 353, 387, 475, 742
BsmAI GTCTC 3 cut(s) 235, 443, 511
BsmBI CGTCTC 2 cut(s) 443, 511
BsmFI GGGAC 3 cut(s) 125, 233, 458
BsnI GGCC 7 cut(s) 148, 305, 426, 604, 659, 721, 742
Bso31I GGTCTC 1 cut(s) 235
BsoBI CYCGRG 3 cut(s) 106, 183, 420
Bsp1286I GDGCHC 2 cut(s) 62, 343
Bsp13I TCCGGA 1 cut(s) 290
Bsp143I GATC 4 cut(s) 15, 214, 551, 644
BspANI GGCC 7 cut(s) 148, 305, 426, 604, 659, 721, 742
BspEI TCCGGA 1 cut(s) 290
BspFNI CGCG 7 cut(s) 155, 174, 329, 513, 515, 522, 701
BspLI GGNNCC 7 cut(s) 41, 221, 222, 358, 427, 588, 720
BspPI GGATC 4 cut(s) 23, 222, 559, 639
BspQI GCTCTTC 1 cut(s) 348
BspTNI GGTCTC 1 cut(s) 235
BsrBI CCGCTC 2 cut(s) 165, 662
BsrFI RCCGGY 4 cut(s) 25, 266, 667, 742
BsrI ACTGG 1 cut(s) 133
BssAI RCCGGY 4 cut(s) 25, 266, 667, 742
BssECI CCNNGG 6 cut(s) 106, 143, 236, 309, 421, 722
BssMI GATC 4 cut(s) 15, 214, 551, 644
BssNI GRCGYC 1 cut(s) 436
BssT1I CCWWGG 1 cut(s) 236
Bst4CI ACNGT 1 cut(s) 97
Bst6I CTCTTC 3 cut(s) 348, 421, 603
BstACI GRCGYC 1 cut(s) 436
BstC8I GCNNGC 4 cut(s) 23, 27, 153, 669
BstDEI CTNAG 1 cut(s) 547
BstEII GGTNACC 1 cut(s) 535
BstFNI CGCG 7 cut(s) 155, 174, 329, 513, 515, 522, 701
BstHHI GCGC 4 cut(s) 316, 515, 524, 703
BstKTI GATC 4 cut(s) 18, 217, 554, 647
BstMAI GTCTC 3 cut(s) 235, 443, 511
BstMBI GATC 4 cut(s) 15, 214, 551, 644
BstMCI CGRYCG 6 cut(s) 96, 149, 267, 660, 696, 743
BstPAI GACNNNNGTC 1 cut(s) 225
BstPI GGTNACC 1 cut(s) 535
BstSCI CCNGG 6 cut(s) 11, 105, 106, 143, 308, 474
BstSLI GKGCMC 1 cut(s) 62
BstUI CGCG 7 cut(s) 155, 174, 329, 513, 515, 522, 701
BstV1I GCAGC 2 cut(s) 191, 701
BstX2I RGATCY 1 cut(s) 644
BstYI RGATCY 1 cut(s) 644
BstZI CGGCCG 3 cut(s) 146, 657, 740
BsuRI GGCC 7 cut(s) 148, 305, 426, 604, 659, 721, 742
BtrI CACGTC 2 cut(s) 333, 472
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 4 cut(s) 23, 27, 153, 669
CfoI GCGC 4 cut(s) 316, 515, 524, 703
Cfr10I RCCGGY 4 cut(s) 25, 266, 667, 742
Cfr13I GGNCC 7 cut(s) 40, 220, 285, 303, 356, 425, 719
Cfr9I CCCGGG 1 cut(s) 106
CseI GACGC 1 cut(s) 528
Csp6I GTAC 1 cut(s) 261
CviAII CATG 2 cut(s) 564, 583
CviQI GTAC 1 cut(s) 261
DdeI CTNAG 1 cut(s) 547
DpnI GATC 4 cut(s) 17, 216, 553, 646
DpnII GATC 4 cut(s) 15, 214, 551, 644
EaeI YGGCCR 3 cut(s) 146, 657, 740
EagI CGGCCG 3 cut(s) 146, 657, 740
Eam1104I CTCTTC 3 cut(s) 348, 421, 603
EarI CTCTTC 3 cut(s) 348, 421, 603
EciI GGCGGA 2 cut(s) 356, 654
EclXI CGGCCG 3 cut(s) 146, 657, 740
Eco130I CCWWGG 1 cut(s) 236
Eco31I GGTCTC 1 cut(s) 235
Eco47I GGWCC 4 cut(s) 40, 220, 285, 356
Eco52I CGGCCG 3 cut(s) 146, 657, 740
Eco88I CYCGRG 3 cut(s) 106, 183, 420
Eco91I GGTNACC 1 cut(s) 535
EcoO109I RGGNCCY 3 cut(s) 220, 425, 719
EcoO65I GGTNACC 1 cut(s) 535
EcoT14I CCWWGG 1 cut(s) 236
ErhI CCWWGG 1 cut(s) 236
Esp3I CGTCTC 2 cut(s) 443, 511
FaeI CATG 2 cut(s) 567, 586
FaiI YATR 4 cut(s) 257, 565, 584, 748
FaqI GGGAC 3 cut(s) 125, 233, 458
FatI CATG 2 cut(s) 563, 582
FauI CCCGC 5 cut(s) 30, 70, 170, 437, 548
FblI GTMKAC 1 cut(s) 92
Fnu4HI GCNGC 9 cut(s) 149, 156, 172, 180, 306, 351, 660, 690, 699
Fsp4HI GCNGC 9 cut(s) 149, 156, 172, 180, 306, 351, 660, 690, 699
GlaI GCGC 4 cut(s) 315, 514, 523, 702
GluI GCNGC 9 cut(s) 149, 156, 172, 180, 306, 351, 660, 690, 699
HaeIII GGCC 7 cut(s) 148, 305, 426, 604, 659, 721, 742
HgaI GACGC 1 cut(s) 528
HhaI GCGC 4 cut(s) 316, 515, 524, 703
Hin1I GRCGYC 1 cut(s) 436
Hin1II CATG 2 cut(s) 567, 586
Hin6I GCGC 4 cut(s) 314, 513, 522, 701
HinP1I GCGC 4 cut(s) 314, 513, 522, 701
HincII GTYRAC 2 cut(s) 93, 463
HindII GTYRAC 2 cut(s) 93, 463
HinfI GANTC 4 cut(s) 71, 89, 444, 496
HphI GGTGA 2 cut(s) 185, 225
Hpy166II GTNNAC 5 cut(s) 93, 193, 233, 463, 580
Hpy188I TCNGA 4 cut(s) 70, 214, 443, 483
Hpy188III TCNNGA 3 cut(s) 218, 291, 420
Hpy8I GTNNAC 5 cut(s) 93, 193, 233, 463, 580
Hpy99I CGWCG 7 cut(s) 208, 231, 334, 438, 533, 658, 741
HpyAV CCTTC 2 cut(s) 115, 615
HpyCH4III ACNGT 1 cut(s) 97
HpyCH4IV ACGT 5 cut(s) 332, 402, 436, 453, 471
HpyCH4V TGCA 2 cut(s) 569, 689
HpyF3I CTNAG 1 cut(s) 547
HpySE526I ACGT 5 cut(s) 332, 402, 436, 453, 471
Hsp92I GRCGYC 1 cut(s) 436
Hsp92II CATG 2 cut(s) 567, 586
HspAI GCGC 4 cut(s) 314, 513, 522, 701
KflI GGGWCCC 1 cut(s) 220
Kpn2I TCCGGA 1 cut(s) 290
KroI GCCGGC 2 cut(s) 25, 667
KroNI GCCGGC 2 cut(s) 27, 669
Kzo9I GATC 4 cut(s) 15, 214, 551, 644
LguI GCTCTTC 1 cut(s) 348
LmnI GCTCC 2 cut(s) 124, 667
Lsp1109I GCAGC 2 cut(s) 191, 701
LweI GCATC 1 cut(s) 238
MaeII ACGT 5 cut(s) 332, 402, 436, 453, 471
MaeIII GTNAC 1 cut(s) 535
MalI GATC 4 cut(s) 17, 216, 553, 646
MbiI CCGCTC 2 cut(s) 165, 662
MboI GATC 4 cut(s) 15, 214, 551, 644
MboII GAAGA 3 cut(s) 335, 408, 590
MflI RGATCY 1 cut(s) 644
MhlI GDGCHC 2 cut(s) 62, 343
MluCI AATT 1 cut(s) 484
MlyI GAGTC 2 cut(s) 98, 438
MmeI TCCRAC 1 cut(s) 466
MnlI CCTC 9 cut(s) 43, 76, 298, 374, 416, 554, 606, 715, 732
MroI TCCGGA 1 cut(s) 290
MroNI GCCGGC 2 cut(s) 25, 667
MroXI GAANNNNTTC 1 cut(s) 83
MseI TTAA 2 cut(s) 398, 489
MspR9I CCNGG 6 cut(s) 13, 107, 108, 145, 310, 476
MvnI CGCG 7 cut(s) 155, 174, 329, 513, 515, 522, 701
NaeI GCCGGC 2 cut(s) 27, 669
NciI CCSGG 6 cut(s) 13, 107, 108, 145, 310, 476
NdeII GATC 4 cut(s) 15, 214, 551, 644
NgoMIV GCCGGC 2 cut(s) 25, 667
NlaIII CATG 2 cut(s) 567, 586
NlaIV GGNNCC 7 cut(s) 41, 221, 222, 358, 427, 588, 720
NmeAIII GCCGAG 2 cut(s) 395, 703
PaeR7I CTCGAG 1 cut(s) 183
PciSI GCTCTTC 1 cut(s) 348
PcsI WCGNNNNNNNCGW 3 cut(s) 93, 223, 512
PdiI GCCGGC 2 cut(s) 27, 669
PdmI GAANNNNTTC 1 cut(s) 83
PfeI GAWTC 2 cut(s) 71, 496
PkrI GCNGC 9 cut(s) 150, 157, 173, 181, 307, 352, 661, 691, 700
PleI GAGTC 2 cut(s) 97, 438
PpsI GAGTC 2 cut(s) 97, 438
PpuMI RGGWCCY 1 cut(s) 220
PshAI GACNNNNGTC 1 cut(s) 225
Psp1406I AACGTT 1 cut(s) 453
Psp5II RGGWCCY 1 cut(s) 220
PspEI GGTNACC 1 cut(s) 535
PspN4I GGNNCC 7 cut(s) 41, 221, 222, 358, 427, 588, 720
PspPI GGNCC 7 cut(s) 40, 220, 285, 303, 356, 425, 719
PspPPI RGGWCCY 1 cut(s) 220
PspXI VCTCGAGB 1 cut(s) 183
PsuI RGATCY 1 cut(s) 644
RsaI GTAC 1 cut(s) 262
RsaNI GTAC 1 cut(s) 261
SalI GTCGAC 1 cut(s) 91
SapI GCTCTTC 1 cut(s) 348
SaqAI TTAA 2 cut(s) 398, 489
SatI GCNGC 9 cut(s) 149, 156, 172, 180, 306, 351, 660, 690, 699
Sau3AI GATC 4 cut(s) 15, 214, 551, 644
Sau96I GGNCC 7 cut(s) 40, 220, 285, 303, 356, 425, 719
SchI GAGTC 2 cut(s) 98, 438
ScrFI CCNGG 6 cut(s) 13, 107, 108, 145, 310, 476
SduI GDGCHC 2 cut(s) 62, 343
SetI ASST 9 cut(s) 184, 238, 335, 366, 405, 439, 456, 474, 592
SfaNI GCATC 1 cut(s) 238
Sfr274I CTCGAG 1 cut(s) 183
SinI GGWCC 4 cut(s) 40, 220, 285, 356
SlaI CTCGAG 1 cut(s) 183
SmaI CCCGGG 1 cut(s) 108
SmlI CTYRAG 1 cut(s) 183
SmoI CTYRAG 1 cut(s) 183
Sse9I AATT 1 cut(s) 484
SspI AATATT 1 cut(s) 626
StyD4I CCNGG 6 cut(s) 11, 105, 106, 143, 308, 474
StyI CCWWGG 1 cut(s) 236
TaaI ACNGT 1 cut(s) 97
TaiI ACGT 5 cut(s) 335, 405, 439, 456, 474
TaqI TCGA 5 cut(s) 87, 92, 184, 528, 554
TaqII GACCGA 1 cut(s) 273
TasI AATT 1 cut(s) 484
TauI GCSGC 7 cut(s) 151, 158, 174, 308, 353, 662, 701
TfiI GAWTC 2 cut(s) 71, 496
Tru1I TTAA 2 cut(s) 398, 489
Tru9I TTAA 2 cut(s) 398, 489
TscAI CASTG 1 cut(s) 62
TseI GCWGC 2 cut(s) 179, 689
TspGWI ACGGA 2 cut(s) 91, 127
TspMI CCCGGG 1 cut(s) 106
TspRI CASTG 1 cut(s) 62
VpaK11BI GGWCC 4 cut(s) 40, 220, 285, 356
XapI RAATTY 1 cut(s) 484
XhoI CTCGAG 1 cut(s) 183
XmaI CCCGGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 92
XmnI GAANNNNTTC 1 cut(s) 83
ZraI GACGTC 1 cut(s) 437
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.