Rroxscaffold_28G00446830

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000028
OG0000098
Physical Location & Seq
Forward (+)
5067 .. 6327
1261 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_28G00446830.1

Sequence Viewer

Length: 807 bp
ATGTCTTCCGCCGGATCAGCCGCCGAAGCGGGCTTTGGGTCCAAAAAAGAGGGGCAGTGCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGGCGATTCTGCCAAGCCCCGTTCCCTTGGCGTGGTTTCGCTGGATAGTAGACAGGGACACAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCGGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCGGGGTGGGCAGGCTGTTAAAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCGGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGGAATTTTAACCCGATTCCCTTTCGGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCGGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTCGGCACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

268

Amino Acids

28.48

Weight (kDa)

10.03

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 480
AccBSI CCGCTC 1 cut(s) 704
AccI GTMKAC 1 cut(s) 252
AccII CGCG 6 cut(s) 371, 554, 556, 563, 744, 801
AccIII TCCGGA 1 cut(s) 331
AclI AACGTT 2 cut(s) 92, 494
AclWI GGATC 2 cut(s) 22, 601
AcoI YGGCCR 4 cut(s) 390, 410, 699, 783
AcsI RAATTY 1 cut(s) 526
AcyI GRCGYC 1 cut(s) 477
AfaI GTAC 1 cut(s) 301
AfiI CCNNNNNNNGG 9 cut(s) 74, 234, 395, 408, 424, 516, 522, 785, 792
AgsI TTSAA 3 cut(s) 341, 651, 665
AjiI CACGTC 2 cut(s) 375, 513
AjuI GAANNNNNNNTTGG 2 cut(s) 18, 50
AluBI AGCT 1 cut(s) 183
AluI AGCT 1 cut(s) 183
Alw21I GWGCWC 1 cut(s) 385
Alw26I GTCTC 4 cut(s) 274, 484, 552, 590
AlwI GGATC 2 cut(s) 22, 601
Ama87I CYCGRG 1 cut(s) 461
Aor13HI TCCGGA 1 cut(s) 331
AoxI GGCC 8 cut(s) 344, 390, 410, 465, 644, 699, 762, 783
ApeKI GCWGC 1 cut(s) 732
ApoI RAATTY 1 cut(s) 526
AspLEI GCGC 5 cut(s) 357, 556, 565, 746, 803
AspS9I GGNCC 6 cut(s) 39, 325, 344, 398, 466, 762
AsuC2I CCSGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
AsuHPI GGTGA 1 cut(s) 264
AvaI CYCGRG 1 cut(s) 461
AvaII GGWCC 3 cut(s) 39, 325, 398
BaeGI GKGCMC 1 cut(s) 62
BanII GRGCYC 1 cut(s) 716
BbsI GAAGAC 1 cut(s) 185
Bbv12I GWGCWC 1 cut(s) 385
BbvI GCAGC 1 cut(s) 744
BceAI ACGGC 5 cut(s) 402, 484, 602, 714, 798
BcnI CCSGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
BcoDI GTCTC 4 cut(s) 274, 484, 552, 590
BfaI CTAG 1 cut(s) 173
BglI GCCNNNNNGGC 2 cut(s) 352, 782
BglII AGATCT 1 cut(s) 686
BisI GCNGC 6 cut(s) 21, 347, 393, 702, 733, 742
BlsI GCNGC 6 cut(s) 22, 348, 394, 703, 734, 743
Bme1390I CCNGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
Bme18I GGWCC 3 cut(s) 39, 325, 398
BmeT110I CYCGRG 1 cut(s) 461
BmgBI CACGTC 2 cut(s) 375, 513
BmgT120I GGNCC 6 cut(s) 39, 325, 344, 398, 466, 762
BmiI GGNNCC 7 cut(s) 40, 129, 327, 400, 468, 630, 763
BmrFI CCNGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
BmsI GCATC 1 cut(s) 277
BoxI GACNNNNGTC 1 cut(s) 175
BpiI GAAGAC 1 cut(s) 185
BplI GAGNNNNNCTC 2 cut(s) 167, 199
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
BsaHI GRCGYC 1 cut(s) 477
BsaI GGTCTC 2 cut(s) 274, 590
BsaJI CCNNGG 7 cut(s) 201, 228, 275, 350, 424, 462, 765
BsaWI WCCGGW 2 cut(s) 331, 359
BsaXI ACNNNNNCTCC 4 cut(s) 390, 420, 688, 718
Bsc4I CCNNNNNNNGG 9 cut(s) 74, 234, 395, 408, 424, 516, 522, 785, 792
BseAI TCCGGA 1 cut(s) 331
BseDI CCNNGG 7 cut(s) 201, 228, 275, 350, 424, 462, 765
BseLI CCNNNNNNNGG 9 cut(s) 74, 234, 395, 408, 424, 516, 522, 785, 792
BseSI GKGCMC 1 cut(s) 62
BseX3I CGGCCG 4 cut(s) 390, 410, 699, 783
BseXI GCAGC 1 cut(s) 744
BsgI GTGCAG 1 cut(s) 675
Bsh1236I CGCG 6 cut(s) 371, 554, 556, 563, 744, 801
Bsh1285I CGRYCG 6 cut(s) 306, 393, 413, 702, 739, 786
BshFI GGCC 8 cut(s) 346, 392, 412, 467, 646, 701, 764, 785
BsiEI CGRYCG 6 cut(s) 306, 393, 413, 702, 739, 786
BsiHKAI GWGCWC 1 cut(s) 385
BsiHKCI CYCGRG 1 cut(s) 461
BslFI GGGAC 3 cut(s) 272, 311, 499
BslI CCNNNNNNNGG 9 cut(s) 74, 234, 395, 408, 424, 516, 522, 785, 792
BsmAI GTCTC 4 cut(s) 274, 484, 552, 590
BsmBI CGTCTC 2 cut(s) 484, 552
BsmFI GGGAC 3 cut(s) 272, 311, 499
BsnI GGCC 8 cut(s) 346, 392, 412, 467, 646, 701, 764, 785
Bso31I GGTCTC 2 cut(s) 274, 590
BsoBI CYCGRG 1 cut(s) 461
Bsp1286I GDGCHC 3 cut(s) 62, 385, 716
Bsp13I TCCGGA 1 cut(s) 331
Bsp143I GATC 3 cut(s) 14, 593, 686
BspANI GGCC 8 cut(s) 346, 392, 412, 467, 646, 701, 764, 785
BspEI TCCGGA 1 cut(s) 331
BspFNI CGCG 6 cut(s) 371, 554, 556, 563, 744, 801
BspLI GGNNCC 7 cut(s) 40, 129, 327, 400, 468, 630, 763
BspPI GGATC 2 cut(s) 22, 601
BspQI GCTCTTC 1 cut(s) 390
BspTNI GGTCTC 2 cut(s) 274, 590
BsrBI CCGCTC 1 cut(s) 704
BssECI CCNNGG 7 cut(s) 201, 228, 275, 350, 424, 462, 765
BssMI GATC 3 cut(s) 14, 593, 686
BssNI GRCGYC 1 cut(s) 477
BssT1I CCWWGG 2 cut(s) 228, 275
Bst6I CTCTTC 3 cut(s) 390, 462, 645
BstACI GRCGYC 1 cut(s) 477
BstC8I GCNNGC 3 cut(s) 31, 62, 435
BstDEI CTNAG 1 cut(s) 589
BstEII GGTNACC 1 cut(s) 576
BstFNI CGCG 6 cut(s) 371, 554, 556, 563, 744, 801
BstHHI GCGC 5 cut(s) 357, 556, 565, 746, 803
BstKTI GATC 3 cut(s) 17, 596, 689
BstMAI GTCTC 4 cut(s) 274, 484, 552, 590
BstMBI GATC 3 cut(s) 14, 593, 686
BstMCI CGRYCG 6 cut(s) 306, 393, 413, 702, 739, 786
BstPAI GACNNNNGTC 1 cut(s) 175
BstPI GGTNACC 1 cut(s) 576
BstSCI CCNGG 8 cut(s) 201, 305, 349, 423, 515, 580, 709, 785
BstSLI GKGCMC 1 cut(s) 62
BstUI CGCG 6 cut(s) 371, 554, 556, 563, 744, 801
BstV1I GCAGC 1 cut(s) 744
BstV2I GAAGAC 1 cut(s) 185
BstX2I RGATCY 1 cut(s) 686
BstYI RGATCY 1 cut(s) 686
BstZI CGGCCG 4 cut(s) 390, 410, 699, 783
BsuRI GGCC 8 cut(s) 346, 392, 412, 467, 646, 701, 764, 785
BtrI CACGTC 2 cut(s) 375, 513
BtsI GCAGTG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 62
Cac8I GCNNGC 3 cut(s) 31, 62, 435
CfoI GCGC 5 cut(s) 357, 556, 565, 746, 803
Cfr13I GGNCC 6 cut(s) 39, 325, 344, 398, 466, 762
CseI GACGC 1 cut(s) 569
Csp6I GTAC 1 cut(s) 300
CviAII CATG 2 cut(s) 606, 625
CviQI GTAC 1 cut(s) 300
DdeI CTNAG 1 cut(s) 589
DpnI GATC 3 cut(s) 16, 595, 688
DpnII GATC 3 cut(s) 14, 593, 686
EaeI YGGCCR 4 cut(s) 390, 410, 699, 783
EagI CGGCCG 4 cut(s) 390, 410, 699, 783
Eam1104I CTCTTC 3 cut(s) 390, 462, 645
EarI CTCTTC 3 cut(s) 390, 462, 645
EciI GGCGGA 1 cut(s) 696
EclXI CGGCCG 4 cut(s) 390, 410, 699, 783
Eco130I CCWWGG 2 cut(s) 228, 275
Eco24I GRGCYC 1 cut(s) 716
Eco31I GGTCTC 2 cut(s) 274, 590
Eco47I GGWCC 3 cut(s) 39, 325, 398
Eco52I CGGCCG 4 cut(s) 390, 410, 699, 783
Eco88I CYCGRG 1 cut(s) 461
Eco91I GGTNACC 1 cut(s) 576
EcoO109I RGGNCCY 2 cut(s) 466, 762
EcoO65I GGTNACC 1 cut(s) 576
EcoT14I CCWWGG 2 cut(s) 228, 275
EcoT38I GRGCYC 1 cut(s) 716
ErhI CCWWGG 2 cut(s) 228, 275
Esp3I CGTCTC 2 cut(s) 484, 552
FaeI CATG 2 cut(s) 609, 628
FaiI YATR 5 cut(s) 138, 296, 607, 626, 792
FaqI GGGAC 3 cut(s) 272, 311, 499
FatI CATG 2 cut(s) 605, 624
FauI CCCGC 3 cut(s) 22, 69, 478
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 6 cut(s) 21, 347, 393, 702, 733, 742
FriOI GRGCYC 1 cut(s) 716
Fsp4HI GCNGC 6 cut(s) 21, 347, 393, 702, 733, 742
FspBI CTAG 1 cut(s) 173
GlaI GCGC 5 cut(s) 356, 555, 564, 745, 802
GluI GCNGC 6 cut(s) 21, 347, 393, 702, 733, 742
HaeIII GGCC 8 cut(s) 346, 392, 412, 467, 646, 701, 764, 785
HgaI GACGC 1 cut(s) 569
HhaI GCGC 5 cut(s) 357, 556, 565, 746, 803
Hin1I GRCGYC 1 cut(s) 477
Hin1II CATG 2 cut(s) 609, 628
Hin6I GCGC 5 cut(s) 355, 554, 563, 744, 801
HinP1I GCGC 5 cut(s) 355, 554, 563, 744, 801
HincII GTYRAC 1 cut(s) 504
HindII GTYRAC 1 cut(s) 504
HinfI GANTC 5 cut(s) 70, 176, 208, 485, 538
HphI GGTGA 1 cut(s) 264
Hpy166II GTNNAC 4 cut(s) 253, 272, 504, 622
Hpy188I TCNGA 3 cut(s) 69, 170, 484
Hpy188III TCNNGA 3 cut(s) 332, 461, 523
Hpy8I GTNNAC 4 cut(s) 253, 272, 504, 622
Hpy99I CGWCG 5 cut(s) 376, 479, 574, 700, 784
HpyAV CCTTC 2 cut(s) 118, 657
HpyCH4IV ACGT 5 cut(s) 92, 374, 477, 494, 512
HpyCH4V TGCA 3 cut(s) 611, 692, 732
HpyF3I CTNAG 1 cut(s) 589
HpySE526I ACGT 5 cut(s) 92, 374, 477, 494, 512
Hsp92I GRCGYC 1 cut(s) 477
Hsp92II CATG 2 cut(s) 609, 628
HspAI GCGC 5 cut(s) 355, 554, 563, 744, 801
Kpn2I TCCGGA 1 cut(s) 331
Kzo9I GATC 3 cut(s) 14, 593, 686
LguI GCTCTTC 1 cut(s) 390
LmnI GCTCC 2 cut(s) 133, 709
Lsp1109I GCAGC 1 cut(s) 744
LweI GCATC 1 cut(s) 277
MaeI CTAG 1 cut(s) 173
MaeII ACGT 5 cut(s) 92, 374, 477, 494, 512
MaeIII GTNAC 2 cut(s) 576, 795
MalI GATC 3 cut(s) 16, 595, 688
MbiI CCGCTC 1 cut(s) 704
MboI GATC 3 cut(s) 14, 593, 686
MboII GAAGA 4 cut(s) 185, 377, 449, 632
MflI RGATCY 1 cut(s) 686
MhlI GDGCHC 3 cut(s) 62, 385, 716
MluCI AATT 1 cut(s) 526
MlyI GAGTC 2 cut(s) 185, 479
MmeI TCCRAC 1 cut(s) 148
MnlI CCTC 9 cut(s) 43, 75, 156, 339, 416, 457, 648, 758, 775
MroI TCCGGA 1 cut(s) 331
MseI TTAA 4 cut(s) 95, 441, 531, 805
MspR9I CCNGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
MvnI CGCG 6 cut(s) 371, 554, 556, 563, 744, 801
NciI CCSGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
NdeII GATC 3 cut(s) 14, 593, 686
NlaIII CATG 2 cut(s) 609, 628
NlaIV GGNNCC 7 cut(s) 40, 129, 327, 400, 468, 630, 763
NmeAIII GCCGAG 2 cut(s) 438, 746
NmuCI GTSAC 1 cut(s) 795
PciSI GCTCTTC 1 cut(s) 390
PcsI WCGNNNNNNNCGW 1 cut(s) 553
PfeI GAWTC 3 cut(s) 70, 208, 538
PkrI GCNGC 6 cut(s) 22, 348, 394, 703, 734, 743
PleI GAGTC 2 cut(s) 184, 479
PpsI GAGTC 2 cut(s) 184, 479
PshAI GACNNNNGTC 1 cut(s) 175
Psp1406I AACGTT 2 cut(s) 92, 494
PspEI GGTNACC 1 cut(s) 576
PspN4I GGNNCC 7 cut(s) 40, 129, 327, 400, 468, 630, 763
PspPI GGNCC 6 cut(s) 39, 325, 344, 398, 466, 762
PsuI RGATCY 1 cut(s) 686
RsaI GTAC 1 cut(s) 301
RsaNI GTAC 1 cut(s) 300
SapI GCTCTTC 1 cut(s) 390
SaqAI TTAA 4 cut(s) 95, 441, 531, 805
SatI GCNGC 6 cut(s) 21, 347, 393, 702, 733, 742
Sau3AI GATC 3 cut(s) 14, 593, 686
Sau96I GGNCC 6 cut(s) 39, 325, 344, 398, 466, 762
SchI GAGTC 2 cut(s) 185, 479
ScrFI CCNGG 8 cut(s) 203, 307, 351, 425, 517, 582, 711, 787
SduI GDGCHC 3 cut(s) 62, 385, 716
SfaNI GCATC 1 cut(s) 277
SinI GGWCC 3 cut(s) 39, 325, 398
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 1 cut(s) 526
SspI AATATT 1 cut(s) 668
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 8 cut(s) 201, 305, 349, 423, 515, 580, 709, 785
StyI CCWWGG 2 cut(s) 228, 275
TaiI ACGT 5 cut(s) 95, 377, 480, 497, 515
TaqI TCGA 2 cut(s) 569, 596
TaqII GACCGA 1 cut(s) 313
TasI AATT 1 cut(s) 526
TauI GCSGC 5 cut(s) 23, 349, 395, 704, 744
TfiI GAWTC 3 cut(s) 70, 208, 538
Tru1I TTAA 4 cut(s) 95, 441, 531, 805
Tru9I TTAA 4 cut(s) 95, 441, 531, 805
TscAI CASTG 1 cut(s) 62
TseFI GTSAC 1 cut(s) 795
TseI GCWGC 1 cut(s) 732
Tsp45I GTSAC 1 cut(s) 795
TspGWI ACGGA 1 cut(s) 90
TspRI CASTG 1 cut(s) 62
VpaK11BI GGWCC 3 cut(s) 39, 325, 398
XapI RAATTY 1 cut(s) 526
XmiI GTMKAC 1 cut(s) 252
XspI CTAG 1 cut(s) 173
ZraI GACGTC 1 cut(s) 478
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.