Rroxscaffold_36G00440170

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000036
OG0000098
Physical Location & Seq
Reverse (-)
59521 .. 60417
897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_36G00440170.1

Sequence Viewer

Length: 498 bp
ATGGTTGCAAGCTCGCCCGGGAGCGATCGCTTCCGCCGGATCGGCTTGTCGCTCTTTGGCCGTCCATTGAGCGGTTCCCGATCCATTCACGGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGGCCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCGCACGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

165

Amino Acids

18.48

Weight (kDa)

11.78

Isoelectric Point (pI)

69.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 478
AccBSI CCGCTC 2 cut(s) 72, 199
AccI GTMKAC 1 cut(s) 125
AccII CGCG 4 cut(s) 189, 208, 439, 454
AccIII TCCGGA 1 cut(s) 414
AclWI GGATC 4 cut(s) 47, 75, 297, 310
AcoI YGGCCR 3 cut(s) 58, 179, 387
AfaI GTAC 2 cut(s) 112, 385
AfiI CCNNNNNNNGG 6 cut(s) 71, 177, 181, 188, 478, 491
AgsI TTSAA 2 cut(s) 134, 424
AjiI CACGTC 1 cut(s) 458
AluBI AGCT 2 cut(s) 12, 217
AluI AGCT 2 cut(s) 12, 217
Alw21I GWGCWC 1 cut(s) 468
Alw26I GTCTC 1 cut(s) 358
AlwI GGATC 4 cut(s) 47, 75, 297, 310
AlwNI CAGNNNCTG 2 cut(s) 351, 478
Ama87I CYCGRG 4 cut(s) 17, 218, 274, 291
Aor13HI TCCGGA 1 cut(s) 414
AoxI GGCC 4 cut(s) 58, 179, 387, 427
ApeKI GCWGC 1 cut(s) 214
AsiSI GCGATCGC 1 cut(s) 28
AspLEI GCGC 2 cut(s) 439, 441
AspS9I GGNCC 4 cut(s) 256, 409, 427, 481
AsuC2I CCSGG 6 cut(s) 18, 19, 140, 178, 391, 434
AsuHPI GGTGA 2 cut(s) 220, 348
AvaI CYCGRG 4 cut(s) 17, 218, 274, 291
AvaII GGWCC 3 cut(s) 256, 409, 481
BaeGI GKGCMC 1 cut(s) 268
BamHI GGATCC 1 cut(s) 302
Bbv12I GWGCWC 1 cut(s) 468
BbvI GCAGC 1 cut(s) 226
BceAI ACGGC 2 cut(s) 45, 402
BcnI CCSGG 6 cut(s) 18, 19, 140, 178, 391, 434
BcoDI GTCTC 1 cut(s) 358
BglI GCCNNNNNGGC 1 cut(s) 42
BisI GCNGC 5 cut(s) 190, 206, 215, 430, 476
BlsI GCNGC 5 cut(s) 191, 207, 216, 431, 477
Bme1390I CCNGG 6 cut(s) 18, 19, 140, 178, 391, 434
Bme18I GGWCC 3 cut(s) 256, 409, 481
BmeT110I CYCGRG 4 cut(s) 17, 218, 274, 291
BmgBI CACGTC 1 cut(s) 458
BmgT120I GGNCC 4 cut(s) 256, 409, 427, 481
BmiI GGNNCC 5 cut(s) 76, 257, 258, 304, 483
BmrFI CCNGG 6 cut(s) 18, 19, 140, 178, 391, 434
BmrI ACTGGG 2 cut(s) 160, 262
BmsI GCATC 1 cut(s) 361
BmuI ACTGGG 2 cut(s) 160, 262
BpuMI CCSGG 6 cut(s) 18, 19, 140, 178, 391, 434
BsaI GGTCTC 1 cut(s) 358
BsaJI CCNNGG 6 cut(s) 17, 139, 176, 206, 292, 359
BsaWI WCCGGW 1 cut(s) 414
BsaXI ACNNNNNCTCC 1 cut(s) 473
Bsc4I CCNNNNNNNGG 6 cut(s) 71, 177, 181, 188, 478, 491
Bse118I RCCGGY 1 cut(s) 181
Bse1I ACTGG 3 cut(s) 114, 166, 257
BseAI TCCGGA 1 cut(s) 414
BseDI CCNNGG 6 cut(s) 17, 139, 176, 206, 292, 359
BseLI CCNNNNNNNGG 6 cut(s) 71, 177, 181, 188, 478, 491
BseMII CTCAG 1 cut(s) 111
BseNI ACTGG 3 cut(s) 114, 166, 257
BsePI GCGCGC 1 cut(s) 437
BseSI GKGCMC 1 cut(s) 268
BseX3I CGGCCG 2 cut(s) 179, 387
BseXI GCAGC 1 cut(s) 226
BseYI CCCAGC 1 cut(s) 267
Bsh1236I CGCG 4 cut(s) 189, 208, 439, 454
Bsh1285I CGRYCG 4 cut(s) 28, 94, 182, 390
BshFI GGCC 4 cut(s) 60, 181, 389, 429
BsiEI CGRYCG 4 cut(s) 28, 94, 182, 390
BsiHKAI GWGCWC 1 cut(s) 468
BsiHKCI CYCGRG 4 cut(s) 17, 218, 274, 291
BsiSI CCGG 9 cut(s) 18, 37, 139, 178, 182, 390, 415, 433, 492
BslFI GGGAC 3 cut(s) 158, 263, 269
BslI CCNNNNNNNGG 6 cut(s) 71, 177, 181, 188, 478, 491
BsmAI GTCTC 1 cut(s) 358
BsmFI GGGAC 3 cut(s) 158, 263, 269
BsnI GGCC 4 cut(s) 60, 181, 389, 429
Bso31I GGTCTC 1 cut(s) 358
BsoBI CYCGRG 4 cut(s) 17, 218, 274, 291
Bsp1286I GDGCHC 2 cut(s) 268, 468
Bsp13I TCCGGA 1 cut(s) 414
Bsp143I GATC 4 cut(s) 25, 39, 80, 302
BspANI GGCC 4 cut(s) 60, 181, 389, 429
BspCNI CTCAG 1 cut(s) 112
BspEI TCCGGA 1 cut(s) 414
BspFNI CGCG 4 cut(s) 189, 208, 439, 454
BspLI GGNNCC 5 cut(s) 76, 257, 258, 304, 483
BspPI GGATC 4 cut(s) 47, 75, 297, 310
BspQI GCTCTTC 1 cut(s) 473
BspTNI GGTCTC 1 cut(s) 358
BsrBI CCGCTC 2 cut(s) 72, 199
BsrFI RCCGGY 1 cut(s) 181
BsrI ACTGG 3 cut(s) 114, 166, 257
BssAI RCCGGY 1 cut(s) 181
BssECI CCNNGG 6 cut(s) 17, 139, 176, 206, 292, 359
BssHII GCGCGC 1 cut(s) 437
BssMI GATC 4 cut(s) 25, 39, 80, 302
BssT1I CCWWGG 1 cut(s) 359
Bst4CI ACNGT 2 cut(s) 92, 130
Bst6I CTCTTC 1 cut(s) 473
BstC8I GCNNGC 5 cut(s) 10, 14, 183, 187, 439
BstDEI CTNAG 1 cut(s) 120
BstDSI CCRYGG 1 cut(s) 206
BstFNI CGCG 4 cut(s) 189, 208, 439, 454
BstHHI GCGC 2 cut(s) 439, 441
BstKTI GATC 4 cut(s) 28, 42, 83, 305
BstMAI GTCTC 1 cut(s) 358
BstMBI GATC 4 cut(s) 25, 39, 80, 302
BstMCI CGRYCG 4 cut(s) 28, 94, 182, 390
BstMWI GCNNNNNNNGC 8 cut(s) 42, 205, 211, 214, 220, 400, 438, 472
BstSCI CCNGG 6 cut(s) 16, 17, 138, 176, 389, 432
BstSLI GKGCMC 1 cut(s) 268
BstUI CGCG 4 cut(s) 189, 208, 439, 454
BstV1I GCAGC 1 cut(s) 226
BstX2I RGATCY 1 cut(s) 302
BstYI RGATCY 1 cut(s) 302
BstZI CGGCCG 2 cut(s) 179, 387
BsuRI GGCC 4 cut(s) 60, 181, 389, 429
BtgI CCRYGG 1 cut(s) 206
BtrI CACGTC 1 cut(s) 458
Cac8I GCNNGC 5 cut(s) 10, 14, 183, 187, 439
CaiI CAGNNNCTG 2 cut(s) 351, 478
CfoI GCGC 2 cut(s) 439, 441
Cfr10I RCCGGY 1 cut(s) 181
Cfr13I GGNCC 4 cut(s) 256, 409, 427, 481
Cfr42I CCGCGG 1 cut(s) 209
Cfr9I CCCGGG 1 cut(s) 17
Csp6I GTAC 2 cut(s) 111, 384
CviQI GTAC 2 cut(s) 111, 384
DdeI CTNAG 1 cut(s) 120
DpnI GATC 4 cut(s) 27, 41, 82, 304
DpnII GATC 4 cut(s) 25, 39, 80, 302
EaeI YGGCCR 3 cut(s) 58, 179, 387
EagI CGGCCG 2 cut(s) 179, 387
Eam1104I CTCTTC 1 cut(s) 473
EarI CTCTTC 1 cut(s) 473
EciI GGCGGA 1 cut(s) 23
EclXI CGGCCG 2 cut(s) 179, 387
Eco130I CCWWGG 1 cut(s) 359
Eco31I GGTCTC 1 cut(s) 358
Eco47I GGWCC 3 cut(s) 256, 409, 481
Eco52I CGGCCG 2 cut(s) 179, 387
Eco88I CYCGRG 4 cut(s) 17, 218, 274, 291
EcoO109I RGGNCCY 1 cut(s) 256
EcoT14I CCWWGG 1 cut(s) 359
ErhI CCWWGG 1 cut(s) 359
FaiI YATR 1 cut(s) 380
FaqI GGGAC 3 cut(s) 158, 263, 269
FauI CCCGC 1 cut(s) 204
FblI GTMKAC 1 cut(s) 125
Fnu4HI GCNGC 5 cut(s) 190, 206, 215, 430, 476
Fsp4HI GCNGC 5 cut(s) 190, 206, 215, 430, 476
GlaI GCGC 2 cut(s) 438, 440
GluI GCNGC 5 cut(s) 190, 206, 215, 430, 476
GsaI CCCAGC 1 cut(s) 271
HaeIII GGCC 4 cut(s) 60, 181, 389, 429
HapII CCGG 9 cut(s) 18, 37, 139, 178, 182, 390, 415, 433, 492
HhaI GCGC 2 cut(s) 439, 441
Hin6I GCGC 2 cut(s) 437, 439
HinP1I GCGC 2 cut(s) 437, 439
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HinfI GANTC 2 cut(s) 97, 122
HpaII CCGG 9 cut(s) 18, 37, 139, 178, 182, 390, 415, 433, 492
HphI GGTGA 2 cut(s) 220, 348
Hpy166II GTNNAC 3 cut(s) 126, 228, 356
Hpy188I TCNGA 2 cut(s) 96, 121
Hpy188III TCNNGA 4 cut(s) 78, 248, 291, 415
Hpy8I GTNNAC 3 cut(s) 126, 228, 356
Hpy99I CGWCG 2 cut(s) 243, 459
HpyAV CCTTC 1 cut(s) 148
HpyCH4III ACNGT 2 cut(s) 92, 130
HpyCH4IV ACGT 1 cut(s) 457
HpyCH4V TGCA 1 cut(s) 8
HpyF10VI GCNNNNNNNGC 8 cut(s) 42, 205, 211, 214, 220, 400, 438, 472
HpyF3I CTNAG 1 cut(s) 120
HpySE526I ACGT 1 cut(s) 457
HspAI GCGC 2 cut(s) 437, 439
KflI GGGWCCC 1 cut(s) 256
Kpn2I TCCGGA 1 cut(s) 414
KroI GCCGGC 1 cut(s) 181
KroNI GCCGGC 1 cut(s) 183
KspI CCGCGG 1 cut(s) 209
Kzo9I GATC 4 cut(s) 25, 39, 80, 302
LguI GCTCTTC 1 cut(s) 473
LmnI GCTCC 2 cut(s) 21, 157
Lsp1109I GCAGC 1 cut(s) 226
LweI GCATC 1 cut(s) 361
MaeII ACGT 1 cut(s) 457
MaeIII GTNAC 1 cut(s) 296
MalI GATC 4 cut(s) 27, 41, 82, 304
MbiI CCGCTC 2 cut(s) 72, 199
MboI GATC 4 cut(s) 25, 39, 80, 302
MboII GAAGA 1 cut(s) 460
MflI RGATCY 1 cut(s) 302
MhlI GDGCHC 2 cut(s) 268, 468
MlyI GAGTC 1 cut(s) 131
MmeI TCCRAC 1 cut(s) 74
MnlI CCTC 4 cut(s) 283, 287, 341, 422
MroI TCCGGA 1 cut(s) 414
MroNI GCCGGC 1 cut(s) 181
MspA1I CMGCKG 2 cut(s) 208, 478
MspI CCGG 9 cut(s) 18, 37, 139, 178, 182, 390, 415, 433, 492
MspR9I CCNGG 6 cut(s) 18, 19, 140, 178, 391, 434
MvnI CGCG 4 cut(s) 189, 208, 439, 454
MwoI GCNNNNNNNGC 8 cut(s) 42, 205, 211, 214, 220, 400, 438, 472
NaeI GCCGGC 1 cut(s) 183
NciI CCSGG 6 cut(s) 18, 19, 140, 178, 391, 434
NdeII GATC 4 cut(s) 25, 39, 80, 302
NgoMIV GCCGGC 1 cut(s) 181
NlaIV GGNNCC 5 cut(s) 76, 257, 258, 304, 483
PaeR7I CTCGAG 2 cut(s) 218, 274
PauI GCGCGC 1 cut(s) 437
PciSI GCTCTTC 1 cut(s) 473
PdiI GCCGGC 1 cut(s) 183
PfeI GAWTC 1 cut(s) 97
PflMI CCANNNNNTGG 1 cut(s) 478
PkrI GCNGC 5 cut(s) 191, 207, 216, 431, 477
Ple19I CGATCG 1 cut(s) 28
PleI GAGTC 1 cut(s) 130
PpsI GAGTC 1 cut(s) 130
PpuMI RGGWCCY 1 cut(s) 256
Psp5II RGGWCCY 1 cut(s) 256
PspFI CCCAGC 1 cut(s) 267
PspN4I GGNNCC 5 cut(s) 76, 257, 258, 304, 483
PspPI GGNCC 4 cut(s) 256, 409, 427, 481
PspPPI RGGWCCY 1 cut(s) 256
PspXI VCTCGAGB 2 cut(s) 218, 274
PstNI CAGNNNCTG 2 cut(s) 351, 478
PsuI RGATCY 1 cut(s) 302
PteI GCGCGC 1 cut(s) 437
PvuI CGATCG 1 cut(s) 28
RgaI GCGATCGC 1 cut(s) 28
RsaI GTAC 2 cut(s) 112, 385
RsaNI GTAC 2 cut(s) 111, 384
SacII CCGCGG 1 cut(s) 209
SalI GTCGAC 1 cut(s) 124
SapI GCTCTTC 1 cut(s) 473
SatI GCNGC 5 cut(s) 190, 206, 215, 430, 476
Sau3AI GATC 4 cut(s) 25, 39, 80, 302
Sau96I GGNCC 4 cut(s) 256, 409, 427, 481
SchI GAGTC 1 cut(s) 131
ScrFI CCNGG 6 cut(s) 18, 19, 140, 178, 391, 434
SduI GDGCHC 2 cut(s) 268, 468
SetI ASST 7 cut(s) 14, 219, 298, 361, 370, 460, 491
SfaAI GCGATCGC 1 cut(s) 28
SfaNI GCATC 1 cut(s) 361
Sfr274I CTCGAG 2 cut(s) 218, 274
Sfr303I CCGCGG 1 cut(s) 209
SgfI GCGATCGC 1 cut(s) 28
SgrBI CCGCGG 1 cut(s) 209
SinI GGWCC 3 cut(s) 256, 409, 481
SlaI CTCGAG 2 cut(s) 218, 274
SmaI CCCGGG 1 cut(s) 19
SmlI CTYRAG 2 cut(s) 218, 274
SmoI CTYRAG 2 cut(s) 218, 274
StyD4I CCNGG 6 cut(s) 16, 17, 138, 176, 389, 432
StyI CCWWGG 1 cut(s) 359
TaaI ACNGT 2 cut(s) 92, 130
TaiI ACGT 1 cut(s) 460
TaqI TCGA 3 cut(s) 125, 219, 275
TaqII GACCGA 1 cut(s) 397
TauI GCSGC 4 cut(s) 192, 208, 432, 478
TfiI GAWTC 1 cut(s) 97
TseI GCWGC 1 cut(s) 214
TspGWI ACGGA 4 cut(s) 98, 160, 315, 458
TspMI CCCGGG 1 cut(s) 17
Van91I CCANNNNNTGG 1 cut(s) 478
VpaK11BI GGWCC 3 cut(s) 256, 409, 481
XhoI CTCGAG 2 cut(s) 218, 274
XmaI CCCGGG 1 cut(s) 17
XmiI GTMKAC 1 cut(s) 125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.