Rroxscaffold_29G00441570

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000029
OG0000098
Physical Location & Seq
Forward (+)
30632 .. 31776
1145 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_29G00441570.1

Sequence Viewer

Length: 777 bp
ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCGGGAAAGCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

258

Amino Acids

28.38

Weight (kDa)

10.53

Isoelectric Point (pI)

66.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 729
AccBSI CCGCTC 1 cut(s) 451
AccI GTMKAC 2 cut(s) 325, 379
AccII CGCG 3 cut(s) 441, 460, 705
AccIII TCCGGA 1 cut(s) 666
AclI AACGTT 1 cut(s) 164
AclWI GGATC 3 cut(s) 93, 549, 562
AcoI YGGCCR 1 cut(s) 431
AfaI GTAC 2 cut(s) 366, 637
AfiI CCNNNNNNNGG 8 cut(s) 120, 146, 429, 433, 440, 729, 742, 758
AgsI TTSAA 2 cut(s) 388, 676
AjiI CACGTC 1 cut(s) 709
AjnI CCWGG 1 cut(s) 757
AjuI GAANNNNNNNTTGG 2 cut(s) 90, 122
AluBI AGCT 2 cut(s) 255, 469
AluI AGCT 2 cut(s) 255, 469
Alw21I GWGCWC 1 cut(s) 719
Alw26I GTCTC 1 cut(s) 610
AlwI GGATC 3 cut(s) 93, 549, 562
AlwNI CAGNNNCTG 2 cut(s) 603, 729
Ama87I CYCGRG 3 cut(s) 470, 526, 543
Aor13HI TCCGGA 1 cut(s) 666
AoxI GGCC 2 cut(s) 431, 679
ApeKI GCWGC 2 cut(s) 13, 466
AspLEI GCGC 1 cut(s) 691
AspS9I GGNCC 5 cut(s) 111, 508, 661, 679, 732
AsuC2I CCSGG 5 cut(s) 83, 394, 430, 643, 686
AsuHPI GGTGA 2 cut(s) 472, 600
AvaI CYCGRG 3 cut(s) 470, 526, 543
AvaII GGWCC 4 cut(s) 111, 508, 661, 732
BaeGI GKGCMC 2 cut(s) 133, 520
BamHI GGATCC 1 cut(s) 554
BbsI GAAGAC 2 cut(s) 67, 258
Bbv12I GWGCWC 1 cut(s) 719
BbvI GCAGC 1 cut(s) 478
BceAI ACGGC 1 cut(s) 736
BciT130I CCWGG 1 cut(s) 759
BcnI CCSGG 5 cut(s) 83, 394, 430, 643, 686
BcoDI GTCTC 1 cut(s) 610
BfaI CTAG 1 cut(s) 245
BisI GCNGC 7 cut(s) 14, 44, 442, 458, 467, 682, 727
BlpI GCTNAGC 1 cut(s) 747
BlsI GCNGC 7 cut(s) 15, 45, 443, 459, 468, 683, 728
Bme1390I CCNGG 6 cut(s) 83, 394, 430, 643, 686, 759
Bme18I GGWCC 4 cut(s) 111, 508, 661, 732
BmeT110I CYCGRG 3 cut(s) 470, 526, 543
BmgBI CACGTC 1 cut(s) 709
BmgT120I GGNCC 5 cut(s) 111, 508, 661, 679, 732
BmiI GGNNCC 6 cut(s) 112, 201, 509, 510, 556, 734
BmrFI CCNGG 6 cut(s) 83, 394, 430, 643, 686, 759
BmrI ACTGGG 2 cut(s) 412, 514
BmsI GCATC 1 cut(s) 613
BmuI ACTGGG 2 cut(s) 412, 514
BoxI GACNNNNGTC 1 cut(s) 247
BpiI GAAGAC 2 cut(s) 67, 258
BplI GAGNNNNNCTC 2 cut(s) 239, 271
Bpu1102I GCTNAGC 1 cut(s) 747
BpuEI CTTGAG 1 cut(s) 206
BpuMI CCSGG 5 cut(s) 83, 394, 430, 643, 686
BsaI GGTCTC 1 cut(s) 610
BsaJI CCNNGG 6 cut(s) 300, 428, 458, 544, 611, 758
BsaWI WCCGGW 2 cut(s) 666, 693
BsaXI ACNNNNNCTCC 2 cut(s) 724, 754
Bsc4I CCNNNNNNNGG 8 cut(s) 120, 146, 429, 433, 440, 729, 742, 758
Bse118I RCCGGY 1 cut(s) 433
Bse1I ACTGG 4 cut(s) 24, 368, 418, 509
BseAI TCCGGA 1 cut(s) 666
BseBI CCWGG 1 cut(s) 759
BseDI CCNNGG 6 cut(s) 300, 428, 458, 544, 611, 758
BseLI CCNNNNNNNGG 8 cut(s) 120, 146, 429, 433, 440, 729, 742, 758
BseMII CTCAG 2 cut(s) 365, 738
BseNI ACTGG 4 cut(s) 24, 368, 418, 509
BseSI GKGCMC 2 cut(s) 133, 520
BseX3I CGGCCG 1 cut(s) 431
BseXI GCAGC 1 cut(s) 478
BseYI CCCAGC 2 cut(s) 48, 519
Bsh1236I CGCG 3 cut(s) 441, 460, 705
Bsh1285I CGRYCG 2 cut(s) 434, 642
BshFI GGCC 2 cut(s) 433, 681
BsiEI CGRYCG 2 cut(s) 434, 642
BsiHKAI GWGCWC 1 cut(s) 719
BsiHKCI CYCGRG 3 cut(s) 470, 526, 543
BsiSI CCGG 9 cut(s) 83, 393, 430, 434, 642, 667, 685, 694, 743
BslFI GGGAC 4 cut(s) 345, 410, 515, 521
BslI CCNNNNNNNGG 8 cut(s) 120, 146, 429, 433, 440, 729, 742, 758
BsmAI GTCTC 1 cut(s) 610
BsmFI GGGAC 4 cut(s) 345, 410, 515, 521
BsnI GGCC 2 cut(s) 433, 681
Bso31I GGTCTC 1 cut(s) 610
BsoBI CYCGRG 3 cut(s) 470, 526, 543
Bsp1286I GDGCHC 3 cut(s) 133, 520, 719
Bsp13I TCCGGA 1 cut(s) 666
Bsp143I GATC 2 cut(s) 85, 554
Bsp1720I GCTNAGC 1 cut(s) 747
BspANI GGCC 2 cut(s) 433, 681
BspCNI CTCAG 2 cut(s) 366, 739
BspEI TCCGGA 1 cut(s) 666
BspFNI CGCG 3 cut(s) 441, 460, 705
BspLI GGNNCC 6 cut(s) 112, 201, 509, 510, 556, 734
BspPI GGATC 3 cut(s) 93, 549, 562
BspQI GCTCTTC 1 cut(s) 724
BspTNI GGTCTC 1 cut(s) 610
BsrBI CCGCTC 1 cut(s) 451
BsrFI RCCGGY 1 cut(s) 433
BsrI ACTGG 4 cut(s) 24, 368, 418, 509
BssAI RCCGGY 1 cut(s) 433
BssECI CCNNGG 6 cut(s) 300, 428, 458, 544, 611, 758
BssMI GATC 2 cut(s) 85, 554
BssT1I CCWWGG 2 cut(s) 300, 611
Bst2UI CCWGG 1 cut(s) 759
Bst4CI ACNGT 2 cut(s) 336, 384
Bst6I CTCTTC 1 cut(s) 724
BstC8I GCNNGC 5 cut(s) 93, 103, 435, 439, 769
BstDEI CTNAG 2 cut(s) 374, 747
BstDSI CCRYGG 1 cut(s) 458
BstFNI CGCG 3 cut(s) 441, 460, 705
BstHHI GCGC 1 cut(s) 691
BstKTI GATC 2 cut(s) 88, 557
BstMAI GTCTC 1 cut(s) 610
BstMBI GATC 2 cut(s) 85, 554
BstMCI CGRYCG 2 cut(s) 434, 642
BstMWI GCNNNNNNNGC 9 cut(s) 49, 284, 398, 457, 463, 466, 472, 652, 723
BstNI CCWGG 1 cut(s) 759
BstPAI GACNNNNGTC 1 cut(s) 247
BstSCI CCNGG 6 cut(s) 81, 392, 428, 641, 684, 757
BstSLI GKGCMC 2 cut(s) 133, 520
BstUI CGCG 3 cut(s) 441, 460, 705
BstV1I GCAGC 1 cut(s) 478
BstV2I GAAGAC 2 cut(s) 67, 258
BstX2I RGATCY 1 cut(s) 554
BstYI RGATCY 1 cut(s) 554
BstZI CGGCCG 1 cut(s) 431
BsuRI GGCC 2 cut(s) 433, 681
BtgI CCRYGG 1 cut(s) 458
BtrI CACGTC 1 cut(s) 709
BtsI GCAGTG 1 cut(s) 133
BtsIMutI CAGTG 2 cut(s) 133, 341
Cac8I GCNNGC 5 cut(s) 93, 103, 435, 439, 769
CaiI CAGNNNCTG 2 cut(s) 603, 729
CfoI GCGC 1 cut(s) 691
Cfr10I RCCGGY 1 cut(s) 433
Cfr13I GGNCC 5 cut(s) 111, 508, 661, 679, 732
Cfr42I CCGCGG 1 cut(s) 461
Csp6I GTAC 2 cut(s) 365, 636
CviQI GTAC 2 cut(s) 365, 636
DdeI CTNAG 2 cut(s) 374, 747
DpnI GATC 2 cut(s) 87, 556
DpnII GATC 2 cut(s) 85, 554
EaeI YGGCCR 1 cut(s) 431
EagI CGGCCG 1 cut(s) 431
Eam1104I CTCTTC 1 cut(s) 724
EarI CTCTTC 1 cut(s) 724
EciI GGCGGA 1 cut(s) 68
EclXI CGGCCG 1 cut(s) 431
Eco130I CCWWGG 2 cut(s) 300, 611
Eco31I GGTCTC 1 cut(s) 610
Eco47I GGWCC 4 cut(s) 111, 508, 661, 732
Eco52I CGGCCG 1 cut(s) 431
Eco88I CYCGRG 3 cut(s) 470, 526, 543
EcoO109I RGGNCCY 1 cut(s) 508
EcoRII CCWGG 1 cut(s) 757
EcoT14I CCWWGG 2 cut(s) 300, 611
ErhI CCWWGG 2 cut(s) 300, 611
FaiI YATR 2 cut(s) 210, 632
FaqI GGGAC 4 cut(s) 345, 410, 515, 521
FauI CCCGC 4 cut(s) 100, 141, 283, 456
FblI GTMKAC 2 cut(s) 325, 379
Fnu4HI GCNGC 7 cut(s) 14, 44, 442, 458, 467, 682, 727
Fsp4HI GCNGC 7 cut(s) 14, 44, 442, 458, 467, 682, 727
FspBI CTAG 1 cut(s) 245
GlaI GCGC 1 cut(s) 690
GluI GCNGC 7 cut(s) 14, 44, 442, 458, 467, 682, 727
GsaI CCCAGC 2 cut(s) 52, 523
HaeIII GGCC 2 cut(s) 433, 681
HapII CCGG 9 cut(s) 83, 393, 430, 434, 642, 667, 685, 694, 743
HhaI GCGC 1 cut(s) 691
Hin6I GCGC 1 cut(s) 689
HinP1I GCGC 1 cut(s) 689
HincII GTYRAC 1 cut(s) 380
HindII GTYRAC 1 cut(s) 380
HinfI GANTC 6 cut(s) 142, 248, 281, 341, 351, 376
HpaII CCGG 9 cut(s) 83, 393, 430, 434, 642, 667, 685, 694, 743
HphI GGTGA 2 cut(s) 472, 600
Hpy166II GTNNAC 4 cut(s) 326, 380, 480, 608
Hpy188I TCNGA 4 cut(s) 141, 242, 350, 375
Hpy188III TCNNGA 3 cut(s) 500, 543, 667
Hpy8I GTNNAC 4 cut(s) 326, 380, 480, 608
Hpy99I CGWCG 2 cut(s) 495, 710
HpyAV CCTTC 2 cut(s) 190, 400
HpyCH4III ACNGT 2 cut(s) 336, 384
HpyCH4IV ACGT 2 cut(s) 164, 708
HpyF10VI GCNNNNNNNGC 9 cut(s) 49, 284, 398, 457, 463, 466, 472, 652, 723
HpyF3I CTNAG 2 cut(s) 374, 747
HpySE526I ACGT 2 cut(s) 164, 708
HspAI GCGC 1 cut(s) 689
KflI GGGWCCC 1 cut(s) 508
Kpn2I TCCGGA 1 cut(s) 666
KroI GCCGGC 1 cut(s) 433
KroNI GCCGGC 1 cut(s) 435
KspI CCGCGG 1 cut(s) 461
Kzo9I GATC 2 cut(s) 85, 554
LguI GCTCTTC 1 cut(s) 724
LmnI GCTCC 2 cut(s) 205, 409
Lsp1109I GCAGC 1 cut(s) 478
LweI GCATC 1 cut(s) 613
MaeI CTAG 1 cut(s) 245
MaeII ACGT 2 cut(s) 164, 708
MaeIII GTNAC 1 cut(s) 548
MalI GATC 2 cut(s) 87, 556
MbiI CCGCTC 1 cut(s) 451
MboI GATC 2 cut(s) 85, 554
MboII GAAGA 3 cut(s) 67, 258, 711
MflI RGATCY 1 cut(s) 554
MhlI GDGCHC 3 cut(s) 133, 520, 719
MlyI GAGTC 2 cut(s) 257, 385
MmeI TCCRAC 1 cut(s) 220
MnlI CCTC 8 cut(s) 114, 147, 228, 535, 539, 593, 674, 750
MroI TCCGGA 1 cut(s) 666
MroNI GCCGGC 1 cut(s) 433
MseI TTAA 2 cut(s) 167, 775
MspA1I CMGCKG 3 cut(s) 278, 460, 729
MspI CCGG 9 cut(s) 83, 393, 430, 434, 642, 667, 685, 694, 743
MspR9I CCNGG 6 cut(s) 83, 394, 430, 643, 686, 759
MvaI CCWGG 1 cut(s) 759
MvnI CGCG 3 cut(s) 441, 460, 705
MwoI GCNNNNNNNGC 9 cut(s) 49, 284, 398, 457, 463, 466, 472, 652, 723
NaeI GCCGGC 1 cut(s) 435
NciI CCSGG 5 cut(s) 83, 394, 430, 643, 686
NdeII GATC 2 cut(s) 85, 554
NgoMIV GCCGGC 1 cut(s) 433
NlaIV GGNNCC 6 cut(s) 112, 201, 509, 510, 556, 734
PaeR7I CTCGAG 2 cut(s) 470, 526
PciSI GCTCTTC 1 cut(s) 724
PdiI GCCGGC 1 cut(s) 435
PfeI GAWTC 4 cut(s) 142, 281, 341, 351
PflFI GACNNNGTC 1 cut(s) 71
PflMI CCANNNNNTGG 1 cut(s) 729
PkrI GCNGC 7 cut(s) 15, 45, 443, 459, 468, 683, 728
PleI GAGTC 2 cut(s) 256, 384
PpsI GAGTC 2 cut(s) 256, 384
PpuMI RGGWCCY 1 cut(s) 508
PshAI GACNNNNGTC 1 cut(s) 247
Psp1406I AACGTT 1 cut(s) 164
Psp5II RGGWCCY 1 cut(s) 508
Psp6I CCWGG 1 cut(s) 757
PspFI CCCAGC 2 cut(s) 48, 519
PspGI CCWGG 1 cut(s) 757
PspN4I GGNNCC 6 cut(s) 112, 201, 509, 510, 556, 734
PspPI GGNCC 5 cut(s) 111, 508, 661, 679, 732
PspPPI RGGWCCY 1 cut(s) 508
PspXI VCTCGAGB 2 cut(s) 470, 526
PstNI CAGNNNCTG 2 cut(s) 603, 729
PsuI RGATCY 1 cut(s) 554
PsyI GACNNNGTC 1 cut(s) 71
RsaI GTAC 2 cut(s) 366, 637
RsaNI GTAC 2 cut(s) 365, 636
SacII CCGCGG 1 cut(s) 461
SalI GTCGAC 1 cut(s) 378
SapI GCTCTTC 1 cut(s) 724
SaqAI TTAA 2 cut(s) 167, 775
SatI GCNGC 7 cut(s) 14, 44, 442, 458, 467, 682, 727
Sau3AI GATC 2 cut(s) 85, 554
Sau96I GGNCC 5 cut(s) 111, 508, 661, 679, 732
SchI GAGTC 2 cut(s) 257, 385
ScrFI CCNGG 6 cut(s) 83, 394, 430, 643, 686, 759
SduI GDGCHC 3 cut(s) 133, 520, 719
SfaNI GCATC 1 cut(s) 613
Sfr274I CTCGAG 2 cut(s) 470, 526
Sfr303I CCGCGG 1 cut(s) 461
SgrBI CCGCGG 1 cut(s) 461
SinI GGWCC 4 cut(s) 111, 508, 661, 732
SlaI CTCGAG 2 cut(s) 470, 526
SmlI CTYRAG 3 cut(s) 221, 470, 526
SmoI CTYRAG 3 cut(s) 221, 470, 526
SspMI CTAG 1 cut(s) 245
StyD4I CCNGG 6 cut(s) 81, 392, 428, 641, 684, 757
StyI CCWWGG 2 cut(s) 300, 611
TaaI ACNGT 2 cut(s) 336, 384
TaiI ACGT 2 cut(s) 167, 711
TaqI TCGA 3 cut(s) 379, 471, 527
TaqII GACCGA 1 cut(s) 649
TauI GCSGC 5 cut(s) 46, 444, 460, 684, 729
TfiI GAWTC 4 cut(s) 142, 281, 341, 351
Tru1I TTAA 2 cut(s) 167, 775
Tru9I TTAA 2 cut(s) 167, 775
TscAI CASTG 2 cut(s) 133, 341
TseI GCWGC 2 cut(s) 13, 466
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 4 cut(s) 162, 352, 412, 567
TspRI CASTG 2 cut(s) 133, 341
Tth111I GACNNNGTC 1 cut(s) 71
Van91I CCANNNNNTGG 1 cut(s) 729
VpaK11BI GGWCC 4 cut(s) 111, 508, 661, 732
XhoI CTCGAG 2 cut(s) 470, 526
XmiI GTMKAC 2 cut(s) 325, 379
XspI CTAG 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.