Rroxscaffold_62G00438040

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000062
OG0000098
Physical Location & Seq
Reverse (-)
211242 .. 212431
1190 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_62G00438040.1

Sequence Viewer

Length: 1020 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCCGTGGTAACTTTTCCGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACGTATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCCGGATAGTAGACAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCTCGGATTCCCCTTGTCCGTACCAGTTCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

339

Amino Acids

37.35

Weight (kDa)

10.2

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 971
AccBSI CCGCTC 1 cut(s) 694
AccI GTMKAC 2 cut(s) 550, 620
AccII CGCG 3 cut(s) 684, 703, 947
AccIII TCCGGA 1 cut(s) 908
AclI AACGTT 1 cut(s) 389
AclWI GGATC 5 cut(s) 34, 136, 318, 793, 806
AcoI YGGCCR 2 cut(s) 674, 986
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 608, 880
AfiI CCNNNNNNNGG 8 cut(s) 345, 371, 672, 676, 683, 971, 984, 1006
AgsI TTSAA 2 cut(s) 629, 918
AjiI CACGTC 1 cut(s) 951
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 480, 712
AluI AGCT 5 cut(s) 105, 186, 229, 480, 712
Alw21I GWGCWC 2 cut(s) 231, 961
Alw26I GTCTC 1 cut(s) 853
AlwI GGATC 5 cut(s) 34, 136, 318, 793, 806
AlwNI CAGNNNCTG 1 cut(s) 971
Ama87I CYCGRG 3 cut(s) 634, 713, 787
Aor13HI TCCGGA 1 cut(s) 908
AoxI GGCC 4 cut(s) 136, 674, 921, 986
ApeKI GCWGC 3 cut(s) 58, 709, 772
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 2 cut(s) 588, 934
AspS9I GGNCC 6 cut(s) 336, 745, 751, 903, 921, 974
AsuC2I CCSGG 6 cut(s) 308, 635, 636, 673, 749, 928
AsuHPI GGTGA 2 cut(s) 715, 843
AvaI CYCGRG 3 cut(s) 634, 713, 787
AvaII GGWCC 5 cut(s) 336, 745, 751, 903, 974
BaeGI GKGCMC 2 cut(s) 358, 763
BamHI GGATCC 1 cut(s) 798
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 483
Bbv12I GWGCWC 2 cut(s) 231, 961
BbvI GCAGC 3 cut(s) 45, 721, 784
BceAI ACGGC 1 cut(s) 978
BcnI CCSGG 6 cut(s) 308, 635, 636, 673, 749, 928
BcoDI GTCTC 1 cut(s) 853
BfaI CTAG 2 cut(s) 102, 470
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 929
BisI GCNGC 9 cut(s) 59, 69, 269, 685, 701, 710, 773, 924, 969
BlsI GCNGC 9 cut(s) 60, 70, 270, 686, 702, 711, 774, 925, 970
Bme1390I CCNGG 6 cut(s) 308, 635, 636, 673, 749, 928
Bme18I GGWCC 5 cut(s) 336, 745, 751, 903, 974
BmeT110I CYCGRG 3 cut(s) 634, 713, 787
BmgBI CACGTC 1 cut(s) 951
BmgT120I GGNCC 6 cut(s) 336, 745, 751, 903, 921, 974
BmiI GGNNCC 7 cut(s) 337, 426, 746, 752, 753, 800, 976
BmrFI CCNGG 6 cut(s) 308, 635, 636, 673, 749, 928
BmrI ACTGGG 1 cut(s) 655
BmsI GCATC 1 cut(s) 856
BmuI ACTGGG 1 cut(s) 655
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 292, 483
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 6 cut(s) 308, 635, 636, 673, 749, 928
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 853
BsaJI CCNNGG 9 cut(s) 79, 525, 634, 671, 701, 788, 841, 854, 927
BsaWI WCCGGW 1 cut(s) 908
BsaXI ACNNNNNCTCC 2 cut(s) 966, 996
Bsc4I CCNNNNNNNGG 8 cut(s) 345, 371, 672, 676, 683, 971, 984, 1006
Bse118I RCCGGY 2 cut(s) 676, 884
Bse1I ACTGG 4 cut(s) 169, 610, 661, 1000
BseAI TCCGGA 1 cut(s) 908
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 9 cut(s) 79, 525, 634, 671, 701, 788, 841, 854, 927
BseLI CCNNNNNNNGG 8 cut(s) 345, 371, 672, 676, 683, 971, 984, 1006
BseNI ACTGG 4 cut(s) 169, 610, 661, 1000
BseSI GKGCMC 2 cut(s) 358, 763
BseX3I CGGCCG 2 cut(s) 674, 986
BseXI GCAGC 3 cut(s) 45, 721, 784
BseYI CCCAGC 2 cut(s) 273, 762
Bsh1236I CGCG 3 cut(s) 684, 703, 947
Bsh1285I CGRYCG 4 cut(s) 624, 677, 885, 989
BshFI GGCC 4 cut(s) 138, 676, 923, 988
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 4 cut(s) 624, 677, 885, 989
BsiHKAI GWGCWC 2 cut(s) 231, 961
BsiHKCI CYCGRG 3 cut(s) 634, 713, 787
BslFI GGGAC 3 cut(s) 653, 758, 764
BslI CCNNNNNNNGG 8 cut(s) 345, 371, 672, 676, 683, 971, 984, 1006
BsmAI GTCTC 1 cut(s) 853
BsmFI GGGAC 3 cut(s) 653, 758, 764
BsnI GGCC 4 cut(s) 138, 676, 923, 988
Bso31I GGTCTC 1 cut(s) 853
BsoBI CYCGRG 3 cut(s) 634, 713, 787
Bsp1286I GDGCHC 4 cut(s) 231, 358, 763, 961
Bsp13I TCCGGA 1 cut(s) 908
Bsp143I GATC 4 cut(s) 26, 128, 310, 798
BspANI GGCC 4 cut(s) 138, 676, 923, 988
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 908
BspFNI CGCG 3 cut(s) 684, 703, 947
BspLI GGNNCC 7 cut(s) 337, 426, 746, 752, 753, 800, 976
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 793, 806
BspQI GCTCTTC 2 cut(s) 4, 966
BspTNI GGTCTC 1 cut(s) 853
BsrBI CCGCTC 1 cut(s) 694
BsrFI RCCGGY 2 cut(s) 676, 884
BsrI ACTGG 4 cut(s) 169, 610, 661, 1000
BssAI RCCGGY 2 cut(s) 676, 884
BssECI CCNNGG 9 cut(s) 79, 525, 634, 671, 701, 788, 841, 854, 927
BssMI GATC 4 cut(s) 26, 128, 310, 798
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 525, 854
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 3 cut(s) 151, 560, 625
Bst6I CTCTTC 2 cut(s) 4, 966
BstC8I GCNNGC 5 cut(s) 318, 328, 678, 682, 1012
BstDEI CTNAG 1 cut(s) 235
BstDSI CCRYGG 2 cut(s) 79, 701
BstFNI CGCG 3 cut(s) 684, 703, 947
BstHHI GCGC 2 cut(s) 588, 934
BstKTI GATC 4 cut(s) 29, 131, 313, 801
BstMAI GTCTC 1 cut(s) 853
BstMBI GATC 4 cut(s) 26, 128, 310, 798
BstMCI CGRYCG 4 cut(s) 624, 677, 885, 989
BstPAI GACNNNNGTC 1 cut(s) 472
BstSCI CCNGG 6 cut(s) 306, 633, 634, 671, 747, 926
BstSLI GKGCMC 2 cut(s) 358, 763
BstUI CGCG 3 cut(s) 684, 703, 947
BstV1I GCAGC 3 cut(s) 45, 721, 784
BstV2I GAAGAC 2 cut(s) 292, 483
BstX2I RGATCY 1 cut(s) 798
BstYI RGATCY 1 cut(s) 798
BstZI CGGCCG 2 cut(s) 674, 986
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 4 cut(s) 138, 676, 923, 988
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 2 cut(s) 79, 701
BtrI CACGTC 1 cut(s) 951
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 3 cut(s) 358, 565, 1007
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 5 cut(s) 318, 328, 678, 682, 1012
CaiI CAGNNNCTG 1 cut(s) 971
CfoI GCGC 2 cut(s) 588, 934
Cfr10I RCCGGY 2 cut(s) 676, 884
Cfr13I GGNCC 6 cut(s) 336, 745, 751, 903, 921, 974
Cfr42I CCGCGG 1 cut(s) 704
Cfr9I CCCGGG 1 cut(s) 634
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 607, 879
CviAII CATG 1 cut(s) 583
CviQI GTAC 3 cut(s) 162, 607, 879
DdeI CTNAG 1 cut(s) 235
DpnI GATC 4 cut(s) 28, 130, 312, 800
DpnII GATC 4 cut(s) 26, 128, 310, 798
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 2 cut(s) 674, 986
EagI CGGCCG 2 cut(s) 674, 986
Eam1104I CTCTTC 2 cut(s) 4, 966
EarI CTCTTC 2 cut(s) 4, 966
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 2 cut(s) 674, 986
Eco130I CCWWGG 2 cut(s) 525, 854
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 853
Eco47I GGWCC 5 cut(s) 336, 745, 751, 903, 974
Eco52I CGGCCG 2 cut(s) 674, 986
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 3 cut(s) 634, 713, 787
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 751
EcoT14I CCWWGG 2 cut(s) 525, 854
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 525, 854
FaeI CATG 1 cut(s) 586
FaiI YATR 5 cut(s) 47, 264, 435, 584, 875
FaqI GGGAC 3 cut(s) 653, 758, 764
FatI CATG 1 cut(s) 582
FauI CCCGC 4 cut(s) 325, 366, 508, 699
FblI GTMKAC 2 cut(s) 550, 620
Fnu4HI GCNGC 9 cut(s) 59, 69, 269, 685, 701, 710, 773, 924, 969
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 9 cut(s) 59, 69, 269, 685, 701, 710, 773, 924, 969
FspBI CTAG 2 cut(s) 102, 470
GlaI GCGC 2 cut(s) 587, 933
GluI GCNGC 9 cut(s) 59, 69, 269, 685, 701, 710, 773, 924, 969
GsaI CCCAGC 2 cut(s) 277, 766
HaeIII GGCC 4 cut(s) 138, 676, 923, 988
HhaI GCGC 2 cut(s) 588, 934
Hin1II CATG 1 cut(s) 586
Hin6I GCGC 2 cut(s) 586, 932
HinP1I GCGC 2 cut(s) 586, 932
HincII GTYRAC 1 cut(s) 621
HindII GTYRAC 1 cut(s) 621
HinfI GANTC 7 cut(s) 175, 367, 473, 506, 565, 593, 617
HphI GGTGA 2 cut(s) 715, 843
Hpy166II GTNNAC 4 cut(s) 551, 621, 723, 851
Hpy188I TCNGA 5 cut(s) 94, 174, 366, 467, 592
Hpy188III TCNNGA 3 cut(s) 743, 787, 909
Hpy8I GTNNAC 4 cut(s) 551, 621, 723, 851
Hpy99I CGWCG 3 cut(s) 44, 738, 952
HpyAV CCTTC 3 cut(s) 17, 415, 643
HpyCH4III ACNGT 3 cut(s) 151, 560, 625
HpyCH4IV ACGT 4 cut(s) 39, 260, 389, 950
HpyF3I CTNAG 1 cut(s) 235
HpySE526I ACGT 4 cut(s) 39, 260, 389, 950
Hsp92II CATG 1 cut(s) 586
HspAI GCGC 2 cut(s) 586, 932
KflI GGGWCCC 1 cut(s) 751
Kpn2I TCCGGA 1 cut(s) 908
KroI GCCGGC 1 cut(s) 676
KroNI GCCGGC 1 cut(s) 678
KspI CCGCGG 1 cut(s) 704
Kzo9I GATC 4 cut(s) 26, 128, 310, 798
LguI GCTCTTC 2 cut(s) 4, 966
LmnI GCTCC 2 cut(s) 430, 652
Lsp1109I GCAGC 3 cut(s) 45, 721, 784
LweI GCATC 1 cut(s) 856
MaeI CTAG 2 cut(s) 102, 470
MaeII ACGT 4 cut(s) 39, 260, 389, 950
MaeIII GTNAC 2 cut(s) 83, 792
MalI GATC 4 cut(s) 28, 130, 312, 800
MbiI CCGCTC 1 cut(s) 694
MboI GATC 4 cut(s) 26, 128, 310, 798
MboII GAAGA 4 cut(s) 21, 292, 483, 953
MflI RGATCY 1 cut(s) 798
MhlI GDGCHC 4 cut(s) 231, 358, 763, 961
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 482, 626
MmeI TCCRAC 2 cut(s) 117, 445
MnlI CCTC 9 cut(s) 109, 339, 372, 453, 778, 783, 836, 916, 992
MroI TCCGGA 1 cut(s) 908
MroNI GCCGGC 1 cut(s) 676
MseI TTAA 5 cut(s) 108, 257, 392, 573, 1018
MspA1I CMGCKG 3 cut(s) 503, 703, 971
MspR9I CCNGG 6 cut(s) 308, 635, 636, 673, 749, 928
MvnI CGCG 3 cut(s) 684, 703, 947
NaeI GCCGGC 1 cut(s) 678
NciI CCSGG 6 cut(s) 308, 635, 636, 673, 749, 928
NdeII GATC 4 cut(s) 26, 128, 310, 798
NgoMIV GCCGGC 1 cut(s) 676
NlaIII CATG 1 cut(s) 586
NlaIV GGNNCC 7 cut(s) 337, 426, 746, 752, 753, 800, 976
NmeAIII GCCGAG 1 cut(s) 1014
PaeR7I CTCGAG 1 cut(s) 713
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 966
PcsI WCGNNNNNNNCGW 1 cut(s) 621
PdiI GCCGGC 1 cut(s) 678
PfeI GAWTC 5 cut(s) 175, 367, 506, 565, 593
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 971
PkrI GCNGC 9 cut(s) 60, 70, 270, 686, 702, 711, 774, 925, 970
PleI GAGTC 2 cut(s) 481, 625
PpsI GAGTC 2 cut(s) 481, 625
PpuMI RGGWCCY 1 cut(s) 751
PshAI GACNNNNGTC 1 cut(s) 472
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 751
PspFI CCCAGC 2 cut(s) 273, 762
PspN4I GGNNCC 7 cut(s) 337, 426, 746, 752, 753, 800, 976
PspPI GGNCC 6 cut(s) 336, 745, 751, 903, 921, 974
PspPPI RGGWCCY 1 cut(s) 751
PspXI VCTCGAGB 1 cut(s) 713
PstNI CAGNNNCTG 1 cut(s) 971
PsuI RGATCY 1 cut(s) 798
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 608, 880
RsaNI GTAC 3 cut(s) 162, 607, 879
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 704
SalI GTCGAC 1 cut(s) 619
SapI GCTCTTC 2 cut(s) 4, 966
SaqAI TTAA 5 cut(s) 108, 257, 392, 573, 1018
SatI GCNGC 9 cut(s) 59, 69, 269, 685, 701, 710, 773, 924, 969
Sau3AI GATC 4 cut(s) 26, 128, 310, 798
Sau96I GGNCC 6 cut(s) 336, 745, 751, 903, 921, 974
SchI GAGTC 2 cut(s) 482, 626
ScrFI CCNGG 6 cut(s) 308, 635, 636, 673, 749, 928
SduI GDGCHC 4 cut(s) 231, 358, 763, 961
SfaNI GCATC 1 cut(s) 856
Sfr274I CTCGAG 1 cut(s) 713
Sfr303I CCGCGG 1 cut(s) 704
SgrBI CCGCGG 1 cut(s) 704
SinI GGWCC 5 cut(s) 336, 745, 751, 903, 974
SlaI CTCGAG 1 cut(s) 713
SmaI CCCGGG 1 cut(s) 636
SmlI CTYRAG 2 cut(s) 446, 713
SmoI CTYRAG 2 cut(s) 446, 713
Sse9I AATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 102, 470
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 633, 634, 671, 747, 926
StyI CCWWGG 2 cut(s) 525, 854
TaaI ACNGT 3 cut(s) 151, 560, 625
TaiI ACGT 4 cut(s) 42, 263, 392, 953
TaqI TCGA 5 cut(s) 21, 131, 615, 620, 714
TaqII GACCGA 2 cut(s) 855, 891
TasI AATT 1 cut(s) 110
TauI GCSGC 6 cut(s) 71, 271, 687, 703, 926, 971
TfiI GAWTC 5 cut(s) 175, 367, 506, 565, 593
Tru1I TTAA 5 cut(s) 108, 257, 392, 573, 1018
Tru9I TTAA 5 cut(s) 108, 257, 392, 573, 1018
TscAI CASTG 3 cut(s) 358, 565, 1007
TseI GCWGC 3 cut(s) 58, 709, 772
TspDTI ATGAA 2 cut(s) 62, 571
TspGWI ACGGA 4 cut(s) 387, 594, 655, 811
TspMI CCCGGG 1 cut(s) 634
TspRI CASTG 3 cut(s) 358, 565, 1007
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 971
VpaK11BI GGWCC 5 cut(s) 336, 745, 751, 903, 974
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 713
XmaI CCCGGG 1 cut(s) 634
XmiI GTMKAC 2 cut(s) 550, 620
XspI CTAG 2 cut(s) 102, 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.