Rroxscaffold_113G00451630

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000113
OG0000098
Physical Location & Seq
Forward (+)
8990 .. 9753
764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_113G00451630.1

Sequence Viewer

Length: 615 bp
ATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGCGCACCGGACACCACGCGACGTGCGTGCGGTGCTCTTCCGCCCGCCGGACCCTACCTCCGCCGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGAATTTTAACCCGATTCCCTTTTCGGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGCTCACGCCCTGTGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCTCGGCACTTGCCCCGACGGCCGCGCGTAGTCGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCGCTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCTTGGCGTGGCTCAACAAAGCAGCCACGCCGTCCTACCTATTTAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

204

Amino Acids

22.13

Weight (kDa)

11.94

Isoelectric Point (pI)

61.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 169
AccB1I GGYRCC 1 cut(s) 486
AccBSI CCGCTC 2 cut(s) 392, 524
AccII CGCG 7 cut(s) 55, 243, 245, 252, 432, 475, 477
AccIII TCCGGA 1 cut(s) 16
AclI AACGTT 1 cut(s) 183
AclWI GGATC 1 cut(s) 289
AcoI YGGCCR 2 cut(s) 387, 470
AcsI RAATTY 1 cut(s) 214
AcyI GRCGYC 1 cut(s) 166
AfiI CCNNNNNNNGG 6 cut(s) 83, 111, 205, 496, 503, 570
AgsI TTSAA 3 cut(s) 26, 339, 353
AjiI CACGTC 2 cut(s) 59, 202
AjnI CCWGG 1 cut(s) 110
AluBI AGCT 1 cut(s) 554
AluI AGCT 1 cut(s) 554
Alw21I GWGCWC 2 cut(s) 73, 556
Alw26I GTCTC 2 cut(s) 173, 241
AlwI GGATC 1 cut(s) 289
Ama87I CYCGRG 1 cut(s) 150
Aor13HI TCCGGA 1 cut(s) 16
AoxI GGCC 6 cut(s) 29, 154, 332, 387, 470, 541
ApeKI GCWGC 2 cut(s) 420, 584
ApoI RAATTY 1 cut(s) 214
AspLEI GCGC 5 cut(s) 41, 245, 254, 434, 477
AspS9I GGNCC 5 cut(s) 11, 29, 86, 155, 542
AsuC2I CCSGG 4 cut(s) 36, 206, 399, 497
AvaI CYCGRG 1 cut(s) 150
AvaII GGWCC 2 cut(s) 11, 86
BaeGI GKGCMC 1 cut(s) 489
BanI GGYRCC 1 cut(s) 486
BanII GRGCYC 2 cut(s) 454, 556
BarI GAAGNNNNNNTAC 2 cut(s) 484, 516
Bbv12I GWGCWC 2 cut(s) 73, 556
BbvI GCAGC 2 cut(s) 432, 596
BceAI ACGGC 6 cut(s) 89, 173, 290, 402, 485, 577
BcgI CGANNNNNNTGC 2 cut(s) 45, 79
BciT130I CCWGG 1 cut(s) 112
BcnI CCSGG 4 cut(s) 36, 206, 399, 497
BcoDI GTCTC 2 cut(s) 173, 241
BglI GCCNNNNNGGC 1 cut(s) 469
BglII AGATCT 1 cut(s) 374
BisI GCNGC 7 cut(s) 32, 390, 421, 430, 473, 522, 585
BlsI GCNGC 7 cut(s) 33, 391, 422, 431, 474, 523, 586
Bme1390I CCNGG 5 cut(s) 36, 112, 206, 399, 497
Bme18I GGWCC 2 cut(s) 11, 86
BmeT110I CYCGRG 1 cut(s) 150
BmgBI CACGTC 2 cut(s) 59, 202
BmgT120I GGNCC 5 cut(s) 11, 29, 86, 155, 542
BmiI GGNNCC 4 cut(s) 88, 157, 318, 488
BmrFI CCNGG 5 cut(s) 36, 112, 206, 399, 497
BmsI GCATC 1 cut(s) 525
BpuMI CCSGG 4 cut(s) 36, 206, 399, 497
BsaHI GRCGYC 1 cut(s) 166
BsaJI CCNNGG 3 cut(s) 111, 151, 564
BsaWI WCCGGW 3 cut(s) 16, 43, 503
BsaXI ACNNNNNCTCC 4 cut(s) 78, 108, 376, 406
Bsc4I CCNNNNNNNGG 6 cut(s) 83, 111, 205, 496, 503, 570
BseAI TCCGGA 1 cut(s) 16
BseBI CCWGG 1 cut(s) 112
BseDI CCNNGG 3 cut(s) 111, 151, 564
BseGI GGATG 1 cut(s) 509
BseLI CCNNNNNNNGG 6 cut(s) 83, 111, 205, 496, 503, 570
BseSI GKGCMC 1 cut(s) 489
BseX3I CGGCCG 2 cut(s) 387, 470
BseXI GCAGC 2 cut(s) 432, 596
BsgI GTGCAG 1 cut(s) 363
Bsh1236I CGCG 7 cut(s) 55, 243, 245, 252, 432, 475, 477
Bsh1285I CGRYCG 3 cut(s) 390, 427, 473
BshFI GGCC 6 cut(s) 31, 156, 334, 389, 472, 543
BshNI GGYRCC 1 cut(s) 486
BsiEI CGRYCG 3 cut(s) 390, 427, 473
BsiHKAI GWGCWC 2 cut(s) 73, 556
BsiHKCI CYCGRG 1 cut(s) 150
BsiSI CCGG 8 cut(s) 17, 35, 44, 84, 206, 399, 497, 504
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 6 cut(s) 83, 111, 205, 496, 503, 570
BsmAI GTCTC 2 cut(s) 173, 241
BsmBI CGTCTC 2 cut(s) 173, 241
BsmFI GGGAC 1 cut(s) 188
BsnI GGCC 6 cut(s) 31, 156, 334, 389, 472, 543
BsoBI CYCGRG 1 cut(s) 150
Bsp1286I GDGCHC 4 cut(s) 73, 454, 489, 556
Bsp13I TCCGGA 1 cut(s) 16
Bsp143I GATC 2 cut(s) 281, 374
BspANI GGCC 6 cut(s) 31, 156, 334, 389, 472, 543
BspEI TCCGGA 1 cut(s) 16
BspFNI CGCG 7 cut(s) 55, 243, 245, 252, 432, 475, 477
BspLI GGNNCC 4 cut(s) 88, 157, 318, 488
BspPI GGATC 1 cut(s) 289
BspQI GCTCTTC 1 cut(s) 78
BspT107I GGYRCC 1 cut(s) 486
BsrBI CCGCTC 2 cut(s) 392, 524
BssECI CCNNGG 3 cut(s) 111, 151, 564
BssMI GATC 2 cut(s) 281, 374
BssNI GRCGYC 1 cut(s) 166
BssT1I CCWWGG 1 cut(s) 564
Bst2UI CCWGG 1 cut(s) 112
Bst4CI ACNGT 1 cut(s) 491
Bst6I CTCTTC 3 cut(s) 78, 151, 333
BstACI GRCGYC 1 cut(s) 166
BstC8I GCNNGC 3 cut(s) 64, 81, 122
BstDEI CTNAG 1 cut(s) 277
BstEII GGTNACC 1 cut(s) 265
BstF5I GGATG 1 cut(s) 509
BstFNI CGCG 7 cut(s) 55, 243, 245, 252, 432, 475, 477
BstHHI GCGC 5 cut(s) 41, 245, 254, 434, 477
BstKTI GATC 2 cut(s) 284, 377
BstMAI GTCTC 2 cut(s) 173, 241
BstMBI GATC 2 cut(s) 281, 374
BstMCI CGRYCG 3 cut(s) 390, 427, 473
BstMWI GCNNNNNNNGC 7 cut(s) 68, 249, 251, 386, 426, 429, 469
BstNI CCWGG 1 cut(s) 112
BstPI GGTNACC 1 cut(s) 265
BstSCI CCNGG 5 cut(s) 34, 110, 204, 397, 495
BstSLI GKGCMC 1 cut(s) 489
BstUI CGCG 7 cut(s) 55, 243, 245, 252, 432, 475, 477
BstV1I GCAGC 2 cut(s) 432, 596
BstX2I RGATCY 1 cut(s) 374
BstYI RGATCY 1 cut(s) 374
BstZI CGGCCG 2 cut(s) 387, 470
BsuRI GGCC 6 cut(s) 31, 156, 334, 389, 472, 543
BtgZI GCGATG 1 cut(s) 502
BtrI CACGTC 2 cut(s) 59, 202
BtsCI GGATG 1 cut(s) 509
Cac8I GCNNGC 3 cut(s) 64, 81, 122
CfoI GCGC 5 cut(s) 41, 245, 254, 434, 477
Cfr13I GGNCC 5 cut(s) 11, 29, 86, 155, 542
CseI GACGC 1 cut(s) 258
CviAII CATG 2 cut(s) 294, 313
DdeI CTNAG 1 cut(s) 277
DpnI GATC 2 cut(s) 283, 376
DpnII GATC 2 cut(s) 281, 374
DraI TTTAAA 1 cut(s) 607
EaeI YGGCCR 2 cut(s) 387, 470
EagI CGGCCG 2 cut(s) 387, 470
Eam1104I CTCTTC 3 cut(s) 78, 151, 333
EarI CTCTTC 3 cut(s) 78, 151, 333
EciI GGCGGA 3 cut(s) 66, 86, 384
Ecl136II GAGCTC 1 cut(s) 554
EclXI CGGCCG 2 cut(s) 387, 470
Eco130I CCWWGG 1 cut(s) 564
Eco24I GRGCYC 2 cut(s) 454, 556
Eco47I GGWCC 2 cut(s) 11, 86
Eco52I CGGCCG 2 cut(s) 387, 470
Eco53kI GAGCTC 1 cut(s) 554
Eco88I CYCGRG 1 cut(s) 150
Eco91I GGTNACC 1 cut(s) 265
EcoICRI GAGCTC 1 cut(s) 554
EcoO109I RGGNCCY 1 cut(s) 155
EcoO65I GGTNACC 1 cut(s) 265
EcoRII CCWGG 1 cut(s) 110
EcoT14I CCWWGG 1 cut(s) 564
EcoT38I GRGCYC 2 cut(s) 454, 556
ErhI CCWWGG 1 cut(s) 564
Esp3I CGTCTC 2 cut(s) 173, 241
FaeI CATG 2 cut(s) 297, 316
FaiI YATR 2 cut(s) 295, 314
FaqI GGGAC 1 cut(s) 188
FatI CATG 2 cut(s) 293, 312
FauI CCCGC 4 cut(s) 88, 167, 278, 521
Fnu4HI GCNGC 7 cut(s) 32, 390, 421, 430, 473, 522, 585
FokI GGATG 1 cut(s) 496
FriOI GRGCYC 2 cut(s) 454, 556
Fsp4HI GCNGC 7 cut(s) 32, 390, 421, 430, 473, 522, 585
GlaI GCGC 5 cut(s) 40, 244, 253, 433, 476
GluI GCNGC 7 cut(s) 32, 390, 421, 430, 473, 522, 585
HaeIII GGCC 6 cut(s) 31, 156, 334, 389, 472, 543
HapII CCGG 8 cut(s) 17, 35, 44, 84, 206, 399, 497, 504
HgaI GACGC 1 cut(s) 258
HhaI GCGC 5 cut(s) 41, 245, 254, 434, 477
Hin1I GRCGYC 1 cut(s) 166
Hin1II CATG 2 cut(s) 297, 316
Hin6I GCGC 5 cut(s) 39, 243, 252, 432, 475
HinP1I GCGC 5 cut(s) 39, 243, 252, 432, 475
HincII GTYRAC 1 cut(s) 193
HindII GTYRAC 1 cut(s) 193
HinfI GANTC 3 cut(s) 174, 226, 560
HpaII CCGG 8 cut(s) 17, 35, 44, 84, 206, 399, 497, 504
Hpy166II GTNNAC 2 cut(s) 193, 310
Hpy188I TCNGA 2 cut(s) 173, 213
Hpy188III TCNNGA 3 cut(s) 17, 150, 557
Hpy8I GTNNAC 2 cut(s) 193, 310
Hpy99I CGWCG 5 cut(s) 60, 168, 263, 388, 471
HpyAV CCTTC 1 cut(s) 345
HpyCH4III ACNGT 1 cut(s) 491
HpyCH4IV ACGT 4 cut(s) 58, 166, 183, 201
HpyCH4V TGCA 3 cut(s) 299, 380, 420
HpyF10VI GCNNNNNNNGC 7 cut(s) 68, 249, 251, 386, 426, 429, 469
HpyF3I CTNAG 1 cut(s) 277
HpySE526I ACGT 4 cut(s) 58, 166, 183, 201
Hsp92I GRCGYC 1 cut(s) 166
Hsp92II CATG 2 cut(s) 297, 316
HspAI GCGC 5 cut(s) 39, 243, 252, 432, 475
Kpn2I TCCGGA 1 cut(s) 16
Kzo9I GATC 2 cut(s) 281, 374
LguI GCTCTTC 1 cut(s) 78
LmnI GCTCC 2 cut(s) 397, 551
Lsp1109I GCAGC 2 cut(s) 432, 596
LweI GCATC 1 cut(s) 525
MaeII ACGT 4 cut(s) 58, 166, 183, 201
MaeIII GTNAC 2 cut(s) 265, 491
MalI GATC 2 cut(s) 283, 376
MbiI CCGCTC 2 cut(s) 392, 524
MboI GATC 2 cut(s) 281, 374
MboII GAAGA 3 cut(s) 65, 138, 320
MflI RGATCY 1 cut(s) 374
MhlI GDGCHC 4 cut(s) 73, 454, 489, 556
MluCI AATT 1 cut(s) 214
MlyI GAGTC 1 cut(s) 168
MmeI TCCRAC 1 cut(s) 196
MnlI CCTC 6 cut(s) 24, 104, 146, 284, 336, 446
MroI TCCGGA 1 cut(s) 16
MseI TTAA 3 cut(s) 128, 219, 606
MspI CCGG 8 cut(s) 17, 35, 44, 84, 206, 399, 497, 504
MspR9I CCNGG 5 cut(s) 36, 112, 206, 399, 497
MvaI CCWGG 1 cut(s) 112
MvnI CGCG 7 cut(s) 55, 243, 245, 252, 432, 475, 477
MwoI GCNNNNNNNGC 7 cut(s) 68, 249, 251, 386, 426, 429, 469
NciI CCSGG 4 cut(s) 36, 206, 399, 497
NdeII GATC 2 cut(s) 281, 374
NlaIII CATG 2 cut(s) 297, 316
NlaIV GGNNCC 4 cut(s) 88, 157, 318, 488
NmeAIII GCCGAG 2 cut(s) 125, 433
PciSI GCTCTTC 1 cut(s) 78
PcsI WCGNNNNNNNCGW 2 cut(s) 59, 242
PfeI GAWTC 2 cut(s) 226, 560
PkrI GCNGC 7 cut(s) 33, 391, 422, 431, 474, 523, 586
PleI GAGTC 1 cut(s) 168
PpsI GAGTC 1 cut(s) 168
Psp124BI GAGCTC 1 cut(s) 556
Psp1406I AACGTT 1 cut(s) 183
Psp6I CCWGG 1 cut(s) 110
PspEI GGTNACC 1 cut(s) 265
PspGI CCWGG 1 cut(s) 110
PspN4I GGNNCC 4 cut(s) 88, 157, 318, 488
PspPI GGNCC 5 cut(s) 11, 29, 86, 155, 542
PsuI RGATCY 1 cut(s) 374
SacI GAGCTC 1 cut(s) 556
SapI GCTCTTC 1 cut(s) 78
SaqAI TTAA 3 cut(s) 128, 219, 606
SatI GCNGC 7 cut(s) 32, 390, 421, 430, 473, 522, 585
Sau3AI GATC 2 cut(s) 281, 374
Sau96I GGNCC 5 cut(s) 11, 29, 86, 155, 542
SchI GAGTC 1 cut(s) 168
ScrFI CCNGG 5 cut(s) 36, 112, 206, 399, 497
SduI GDGCHC 4 cut(s) 73, 454, 489, 556
SetI ASST 8 cut(s) 61, 96, 169, 186, 204, 322, 556, 603
SfaNI GCATC 1 cut(s) 525
SinI GGWCC 2 cut(s) 11, 86
Sse9I AATT 1 cut(s) 214
SspI AATATT 1 cut(s) 356
SstI GAGCTC 1 cut(s) 556
StyD4I CCNGG 5 cut(s) 34, 110, 204, 397, 495
StyI CCWWGG 1 cut(s) 564
TaaI ACNGT 1 cut(s) 491
TaiI ACGT 4 cut(s) 61, 169, 186, 204
TaqI TCGA 3 cut(s) 258, 284, 558
TasI AATT 1 cut(s) 214
TauI GCSGC 5 cut(s) 34, 392, 432, 475, 524
TfiI GAWTC 2 cut(s) 226, 560
Tru1I TTAA 3 cut(s) 128, 219, 606
Tru9I TTAA 3 cut(s) 128, 219, 606
TseI GCWGC 2 cut(s) 420, 584
TspDTI ATGAA 1 cut(s) 498
VpaK11BI GGWCC 2 cut(s) 11, 86
XapI RAATTY 1 cut(s) 214
ZraI GACGTC 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.