Rroxscaffold_162G00450770

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000162
OG0000098
Physical Location & Seq
Reverse (-)
15701 .. 16866
1166 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_162G00450770.1

Sequence Viewer

Length: 786 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

261

Amino Acids

28.45

Weight (kDa)

10.52

Isoelectric Point (pI)

58.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 766
AccBSI CCGCTC 1 cut(s) 487
AccI GTMKAC 2 cut(s) 370, 413
AccII CGCG 3 cut(s) 477, 496, 742
AccIII TCCGGA 1 cut(s) 702
AclI AACGTT 1 cut(s) 209
AclWI GGATC 4 cut(s) 34, 138, 585, 598
AcoI YGGCCR 1 cut(s) 467
AfaI GTAC 2 cut(s) 400, 673
AfiI CCNNNNNNNGG 5 cut(s) 165, 191, 476, 766, 779
AgsI TTSAA 2 cut(s) 422, 712
AjiI CACGTC 1 cut(s) 746
AjuI GAANNNNNNNTTGG 2 cut(s) 135, 167
AluBI AGCT 2 cut(s) 300, 505
AluI AGCT 2 cut(s) 300, 505
Alw21I GWGCWC 1 cut(s) 756
Alw26I GTCTC 1 cut(s) 646
AlwI GGATC 4 cut(s) 34, 138, 585, 598
AlwNI CAGNNNCTG 2 cut(s) 639, 766
Ama87I CYCGRG 4 cut(s) 427, 506, 562, 579
Aor13HI TCCGGA 1 cut(s) 702
AoxI GGCC 2 cut(s) 467, 715
ApeKI GCWGC 2 cut(s) 58, 502
AspLEI GCGC 1 cut(s) 728
AspS9I GGNCC 5 cut(s) 156, 544, 697, 715, 769
AsuC2I CCSGG 6 cut(s) 128, 428, 429, 466, 679, 722
AsuHPI GGTGA 2 cut(s) 508, 636
AvaI CYCGRG 4 cut(s) 427, 506, 562, 579
AvaII GGWCC 4 cut(s) 156, 544, 697, 769
BaeGI GKGCMC 2 cut(s) 178, 556
BamHI GGATCC 1 cut(s) 590
BbsI GAAGAC 2 cut(s) 112, 303
Bbv12I GWGCWC 1 cut(s) 756
BbvI GCAGC 2 cut(s) 45, 514
BcnI CCSGG 6 cut(s) 128, 428, 429, 466, 679, 722
BcoDI GTCTC 1 cut(s) 646
BfaI CTAG 1 cut(s) 290
BglI GCCNNNNNGGC 1 cut(s) 723
BisI GCNGC 7 cut(s) 59, 89, 478, 494, 503, 718, 764
BlsI GCNGC 7 cut(s) 60, 90, 479, 495, 504, 719, 765
Bme1390I CCNGG 6 cut(s) 128, 428, 429, 466, 679, 722
Bme18I GGWCC 4 cut(s) 156, 544, 697, 769
BmeT110I CYCGRG 4 cut(s) 427, 506, 562, 579
BmgBI CACGTC 1 cut(s) 746
BmgT120I GGNCC 5 cut(s) 156, 544, 697, 715, 769
BmiI GGNNCC 6 cut(s) 157, 246, 545, 546, 592, 771
BmrFI CCNGG 6 cut(s) 128, 428, 429, 466, 679, 722
BmrI ACTGGG 2 cut(s) 449, 550
BmsI GCATC 1 cut(s) 649
BmuI ACTGGG 2 cut(s) 449, 550
BoxI GACNNNNGTC 1 cut(s) 292
BpiI GAAGAC 2 cut(s) 112, 303
BplI GAGNNNNNCTC 2 cut(s) 284, 316
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 6 cut(s) 128, 428, 429, 466, 679, 722
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 8 cut(s) 345, 427, 428, 464, 494, 580, 647, 721
BsaWI WCCGGW 2 cut(s) 702, 730
BsaXI ACNNNNNCTCC 1 cut(s) 761
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 191, 476, 766, 779
Bse118I RCCGGY 1 cut(s) 469
Bse1I ACTGG 4 cut(s) 69, 402, 455, 545
BseAI TCCGGA 1 cut(s) 702
BseDI CCNNGG 8 cut(s) 345, 427, 428, 464, 494, 580, 647, 721
BseLI CCNNNNNNNGG 5 cut(s) 165, 191, 476, 766, 779
BseMII CTCAG 1 cut(s) 399
BseNI ACTGG 4 cut(s) 69, 402, 455, 545
BseSI GKGCMC 2 cut(s) 178, 556
BseX3I CGGCCG 1 cut(s) 467
BseXI GCAGC 2 cut(s) 45, 514
BseYI CCCAGC 2 cut(s) 93, 555
Bsh1236I CGCG 3 cut(s) 477, 496, 742
Bsh1285I CGRYCG 2 cut(s) 470, 678
BshFI GGCC 2 cut(s) 469, 717
BsiEI CGRYCG 2 cut(s) 470, 678
BsiHKAI GWGCWC 1 cut(s) 756
BsiHKCI CYCGRG 4 cut(s) 427, 506, 562, 579
BsiSI CCGG 9 cut(s) 128, 428, 466, 470, 678, 703, 721, 731, 780
BslFI GGGAC 4 cut(s) 390, 447, 551, 557
BslI CCNNNNNNNGG 5 cut(s) 165, 191, 476, 766, 779
BsmAI GTCTC 1 cut(s) 646
BsmFI GGGAC 4 cut(s) 390, 447, 551, 557
BsnI GGCC 2 cut(s) 469, 717
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 4 cut(s) 427, 506, 562, 579
Bsp1286I GDGCHC 3 cut(s) 178, 556, 756
Bsp13I TCCGGA 1 cut(s) 702
Bsp143I GATC 3 cut(s) 26, 130, 590
BspANI GGCC 2 cut(s) 469, 717
BspCNI CTCAG 1 cut(s) 400
BspEI TCCGGA 1 cut(s) 702
BspFNI CGCG 3 cut(s) 477, 496, 742
BspLI GGNNCC 6 cut(s) 157, 246, 545, 546, 592, 771
BspPI GGATC 4 cut(s) 34, 138, 585, 598
BspQI GCTCTTC 2 cut(s) 4, 761
BspTNI GGTCTC 1 cut(s) 646
BsrBI CCGCTC 1 cut(s) 487
BsrFI RCCGGY 1 cut(s) 469
BsrI ACTGG 4 cut(s) 69, 402, 455, 545
BssAI RCCGGY 1 cut(s) 469
BssECI CCNNGG 8 cut(s) 345, 427, 428, 464, 494, 580, 647, 721
BssMI GATC 3 cut(s) 26, 130, 590
BssT1I CCWWGG 2 cut(s) 345, 647
Bst4CI ACNGT 1 cut(s) 418
Bst6I CTCTTC 2 cut(s) 4, 761
BstC8I GCNNGC 4 cut(s) 138, 148, 471, 475
BstDEI CTNAG 1 cut(s) 408
BstDSI CCRYGG 1 cut(s) 494
BstFNI CGCG 3 cut(s) 477, 496, 742
BstHHI GCGC 1 cut(s) 728
BstKTI GATC 3 cut(s) 29, 133, 593
BstMAI GTCTC 1 cut(s) 646
BstMBI GATC 3 cut(s) 26, 130, 590
BstMCI CGRYCG 2 cut(s) 470, 678
BstPAI GACNNNNGTC 1 cut(s) 292
BstSCI CCNGG 6 cut(s) 126, 426, 427, 464, 677, 720
BstSLI GKGCMC 2 cut(s) 178, 556
BstUI CGCG 3 cut(s) 477, 496, 742
BstV1I GCAGC 2 cut(s) 45, 514
BstV2I GAAGAC 2 cut(s) 112, 303
BstX2I RGATCY 1 cut(s) 590
BstYI RGATCY 1 cut(s) 590
BstZI CGGCCG 1 cut(s) 467
BsuRI GGCC 2 cut(s) 469, 717
BtgI CCRYGG 1 cut(s) 494
BtrI CACGTC 1 cut(s) 746
BtsI GCAGTG 1 cut(s) 178
BtsIMutI CAGTG 1 cut(s) 178
Cac8I GCNNGC 4 cut(s) 138, 148, 471, 475
CaiI CAGNNNCTG 2 cut(s) 639, 766
CfoI GCGC 1 cut(s) 728
Cfr10I RCCGGY 1 cut(s) 469
Cfr13I GGNCC 5 cut(s) 156, 544, 697, 715, 769
Cfr42I CCGCGG 1 cut(s) 497
Cfr9I CCCGGG 1 cut(s) 427
Csp6I GTAC 2 cut(s) 399, 672
CviQI GTAC 2 cut(s) 399, 672
DdeI CTNAG 1 cut(s) 408
DpnI GATC 3 cut(s) 28, 132, 592
DpnII GATC 3 cut(s) 26, 130, 590
EaeI YGGCCR 1 cut(s) 467
EagI CGGCCG 1 cut(s) 467
Eam1104I CTCTTC 2 cut(s) 4, 761
EarI CTCTTC 2 cut(s) 4, 761
EciI GGCGGA 1 cut(s) 113
EclXI CGGCCG 1 cut(s) 467
Eco130I CCWWGG 2 cut(s) 345, 647
Eco31I GGTCTC 1 cut(s) 646
Eco47I GGWCC 4 cut(s) 156, 544, 697, 769
Eco52I CGGCCG 1 cut(s) 467
Eco88I CYCGRG 4 cut(s) 427, 506, 562, 579
EcoO109I RGGNCCY 1 cut(s) 544
EcoT14I CCWWGG 2 cut(s) 345, 647
ErhI CCWWGG 2 cut(s) 345, 647
FaiI YATR 3 cut(s) 47, 255, 668
FaqI GGGAC 4 cut(s) 390, 447, 551, 557
FauI CCCGC 4 cut(s) 145, 186, 328, 492
FblI GTMKAC 2 cut(s) 370, 413
Fnu4HI GCNGC 7 cut(s) 59, 89, 478, 494, 503, 718, 764
Fsp4HI GCNGC 7 cut(s) 59, 89, 478, 494, 503, 718, 764
FspBI CTAG 1 cut(s) 290
GlaI GCGC 1 cut(s) 727
GluI GCNGC 7 cut(s) 59, 89, 478, 494, 503, 718, 764
GsaI CCCAGC 2 cut(s) 97, 559
HaeIII GGCC 2 cut(s) 469, 717
HapII CCGG 9 cut(s) 128, 428, 466, 470, 678, 703, 721, 731, 780
HhaI GCGC 1 cut(s) 728
Hin6I GCGC 1 cut(s) 726
HinP1I GCGC 1 cut(s) 726
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HinfI GANTC 5 cut(s) 187, 293, 326, 385, 410
HpaII CCGG 9 cut(s) 128, 428, 466, 470, 678, 703, 721, 731, 780
HphI GGTGA 2 cut(s) 508, 636
Hpy166II GTNNAC 4 cut(s) 371, 414, 516, 644
Hpy188I TCNGA 4 cut(s) 186, 287, 384, 409
Hpy188III TCNNGA 3 cut(s) 536, 579, 703
Hpy8I GTNNAC 4 cut(s) 371, 414, 516, 644
Hpy99I CGWCG 3 cut(s) 44, 531, 747
HpyAV CCTTC 3 cut(s) 17, 235, 437
HpyCH4III ACNGT 1 cut(s) 418
HpyCH4IV ACGT 3 cut(s) 39, 209, 745
HpyF3I CTNAG 1 cut(s) 408
HpySE526I ACGT 3 cut(s) 39, 209, 745
HspAI GCGC 1 cut(s) 726
KflI GGGWCCC 1 cut(s) 544
Kpn2I TCCGGA 1 cut(s) 702
KroI GCCGGC 1 cut(s) 469
KroNI GCCGGC 1 cut(s) 471
KspI CCGCGG 1 cut(s) 497
Kzo9I GATC 3 cut(s) 26, 130, 590
LguI GCTCTTC 2 cut(s) 4, 761
LmnI GCTCC 2 cut(s) 250, 446
Lsp1109I GCAGC 2 cut(s) 45, 514
LweI GCATC 1 cut(s) 649
MaeI CTAG 1 cut(s) 290
MaeII ACGT 3 cut(s) 39, 209, 745
MaeIII GTNAC 1 cut(s) 584
MalI GATC 3 cut(s) 28, 132, 592
MbiI CCGCTC 1 cut(s) 487
MboI GATC 3 cut(s) 26, 130, 590
MboII GAAGA 4 cut(s) 21, 112, 303, 748
MflI RGATCY 1 cut(s) 590
MhlI GDGCHC 3 cut(s) 178, 556, 756
MlyI GAGTC 2 cut(s) 302, 419
MmeI TCCRAC 1 cut(s) 265
MnlI CCTC 7 cut(s) 159, 192, 273, 571, 575, 629, 710
MroI TCCGGA 1 cut(s) 702
MroNI GCCGGC 1 cut(s) 469
MseI TTAA 1 cut(s) 212
MspA1I CMGCKG 3 cut(s) 323, 496, 766
MspI CCGG 9 cut(s) 128, 428, 466, 470, 678, 703, 721, 731, 780
MspR9I CCNGG 6 cut(s) 128, 428, 429, 466, 679, 722
MvnI CGCG 3 cut(s) 477, 496, 742
NaeI GCCGGC 1 cut(s) 471
NciI CCSGG 6 cut(s) 128, 428, 429, 466, 679, 722
NdeII GATC 3 cut(s) 26, 130, 590
NgoMIV GCCGGC 1 cut(s) 469
NlaIV GGNNCC 6 cut(s) 157, 246, 545, 546, 592, 771
PaeR7I CTCGAG 2 cut(s) 506, 562
PciSI GCTCTTC 2 cut(s) 4, 761
PdiI GCCGGC 1 cut(s) 471
PfeI GAWTC 3 cut(s) 187, 326, 385
PflFI GACNNNGTC 1 cut(s) 116
PflMI CCANNNNNTGG 1 cut(s) 766
PkrI GCNGC 7 cut(s) 60, 90, 479, 495, 504, 719, 765
PleI GAGTC 2 cut(s) 301, 418
PpsI GAGTC 2 cut(s) 301, 418
PpuMI RGGWCCY 1 cut(s) 544
PshAI GACNNNNGTC 1 cut(s) 292
Psp1406I AACGTT 1 cut(s) 209
Psp5II RGGWCCY 1 cut(s) 544
PspFI CCCAGC 2 cut(s) 93, 555
PspN4I GGNNCC 6 cut(s) 157, 246, 545, 546, 592, 771
PspPI GGNCC 5 cut(s) 156, 544, 697, 715, 769
PspPPI RGGWCCY 1 cut(s) 544
PspXI VCTCGAGB 2 cut(s) 506, 562
PstNI CAGNNNCTG 2 cut(s) 639, 766
PsuI RGATCY 1 cut(s) 590
PsyI GACNNNGTC 1 cut(s) 116
RsaI GTAC 2 cut(s) 400, 673
RsaNI GTAC 2 cut(s) 399, 672
SacII CCGCGG 1 cut(s) 497
SalI GTCGAC 1 cut(s) 412
SapI GCTCTTC 2 cut(s) 4, 761
SaqAI TTAA 1 cut(s) 212
SatI GCNGC 7 cut(s) 59, 89, 478, 494, 503, 718, 764
Sau3AI GATC 3 cut(s) 26, 130, 590
Sau96I GGNCC 5 cut(s) 156, 544, 697, 715, 769
SchI GAGTC 2 cut(s) 302, 419
ScrFI CCNGG 6 cut(s) 128, 428, 429, 466, 679, 722
SduI GDGCHC 3 cut(s) 178, 556, 756
SfaNI GCATC 1 cut(s) 649
Sfr274I CTCGAG 2 cut(s) 506, 562
Sfr303I CCGCGG 1 cut(s) 497
SgrBI CCGCGG 1 cut(s) 497
SinI GGWCC 4 cut(s) 156, 544, 697, 769
SlaI CTCGAG 2 cut(s) 506, 562
SmaI CCCGGG 1 cut(s) 429
SmlI CTYRAG 3 cut(s) 266, 506, 562
SmoI CTYRAG 3 cut(s) 266, 506, 562
SspMI CTAG 1 cut(s) 290
StyD4I CCNGG 6 cut(s) 126, 426, 427, 464, 677, 720
StyI CCWWGG 2 cut(s) 345, 647
TaaI ACNGT 1 cut(s) 418
TaiI ACGT 3 cut(s) 42, 212, 748
TaqI TCGA 4 cut(s) 21, 413, 507, 563
TaqII GACCGA 1 cut(s) 685
TauI GCSGC 5 cut(s) 91, 480, 496, 720, 766
TfiI GAWTC 3 cut(s) 187, 326, 385
Tru1I TTAA 1 cut(s) 212
Tru9I TTAA 1 cut(s) 212
TscAI CASTG 1 cut(s) 178
TseI GCWGC 2 cut(s) 58, 502
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 207, 386, 449, 603
TspMI CCCGGG 1 cut(s) 427
TspRI CASTG 1 cut(s) 178
Tth111I GACNNNGTC 1 cut(s) 116
Van91I CCANNNNNTGG 1 cut(s) 766
VpaK11BI GGWCC 4 cut(s) 156, 544, 697, 769
XhoI CTCGAG 2 cut(s) 506, 562
XmaI CCCGGG 1 cut(s) 427
XmiI GTMKAC 2 cut(s) 370, 413
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.