Rroxscaffold_79G00450210

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000079
OG0000098
Physical Location & Seq
Forward (+)
3403 .. 4597
1195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_79G00450210.1

Sequence Viewer

Length: 813 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCCGTGGTAACTTTTCCGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACCGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACGTATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGATTCCCCTTGTCCGTACCAGTTCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGGGTGGGCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

270

Amino Acids

30.14

Weight (kDa)

10.22

Isoelectric Point (pI)

58.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 765
AccBSI CCGCTC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 413
AccII CGCG 3 cut(s) 477, 496, 741
AccIII TCCGGA 1 cut(s) 701
AclWI GGATC 5 cut(s) 34, 136, 318, 586, 599
AcoI YGGCCR 2 cut(s) 467, 780
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 400, 673
AfiI CCNNNNNNNGG 8 cut(s) 346, 372, 465, 469, 476, 765, 778, 794
AgsI TTSAA 2 cut(s) 422, 711
AjiI CACGTC 1 cut(s) 745
AjnI CCWGG 1 cut(s) 793
AluBI AGCT 4 cut(s) 105, 186, 229, 505
AluI AGCT 4 cut(s) 105, 186, 229, 505
Alw21I GWGCWC 2 cut(s) 231, 755
Alw26I GTCTC 1 cut(s) 646
AlwI GGATC 5 cut(s) 34, 136, 318, 586, 599
AlwNI CAGNNNCTG 1 cut(s) 765
Ama87I CYCGRG 3 cut(s) 427, 506, 580
Aor13HI TCCGGA 1 cut(s) 701
AoxI GGCC 4 cut(s) 136, 467, 714, 780
ApeKI GCWGC 3 cut(s) 58, 502, 565
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 727
AspS9I GGNCC 6 cut(s) 337, 538, 544, 696, 714, 768
AsuC2I CCSGG 6 cut(s) 308, 428, 429, 466, 542, 721
AsuHPI GGTGA 2 cut(s) 508, 636
AvaI CYCGRG 3 cut(s) 427, 506, 580
AvaII GGWCC 5 cut(s) 337, 538, 544, 696, 768
BaeGI GKGCMC 2 cut(s) 359, 556
BamHI GGATCC 1 cut(s) 591
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 1 cut(s) 292
Bbv12I GWGCWC 2 cut(s) 231, 755
BbvI GCAGC 3 cut(s) 45, 514, 577
BceAI ACGGC 1 cut(s) 772
BciT130I CCWGG 1 cut(s) 795
BcnI CCSGG 6 cut(s) 308, 428, 429, 466, 542, 721
BcoDI GTCTC 1 cut(s) 646
BfaI CTAG 1 cut(s) 102
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 722
BisI GCNGC 9 cut(s) 59, 69, 269, 478, 494, 503, 566, 717, 763
BlsI GCNGC 9 cut(s) 60, 70, 270, 479, 495, 504, 567, 718, 764
Bme1390I CCNGG 7 cut(s) 308, 428, 429, 466, 542, 721, 795
Bme18I GGWCC 5 cut(s) 337, 538, 544, 696, 768
BmeT110I CYCGRG 3 cut(s) 427, 506, 580
BmgBI CACGTC 1 cut(s) 745
BmgT120I GGNCC 6 cut(s) 337, 538, 544, 696, 714, 768
BmiI GGNNCC 6 cut(s) 338, 539, 545, 546, 593, 770
BmrFI CCNGG 7 cut(s) 308, 428, 429, 466, 542, 721, 795
BmrI ACTGGG 1 cut(s) 448
BmsI GCATC 1 cut(s) 649
BmuI ACTGGG 1 cut(s) 448
BpiI GAAGAC 1 cut(s) 292
BpuMI CCSGG 6 cut(s) 308, 428, 429, 466, 542, 721
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 9 cut(s) 79, 427, 464, 494, 581, 634, 647, 720, 794
BsaWI WCCGGW 3 cut(s) 164, 701, 729
BsaXI ACNNNNNCTCC 2 cut(s) 760, 790
Bsc4I CCNNNNNNNGG 8 cut(s) 346, 372, 465, 469, 476, 765, 778, 794
Bse118I RCCGGY 2 cut(s) 469, 677
Bse1I ACTGG 2 cut(s) 402, 454
BseAI TCCGGA 1 cut(s) 701
BseBI CCWGG 1 cut(s) 795
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 9 cut(s) 79, 427, 464, 494, 581, 634, 647, 720, 794
BseLI CCNNNNNNNGG 8 cut(s) 346, 372, 465, 469, 476, 765, 778, 794
BseNI ACTGG 2 cut(s) 402, 454
BseSI GKGCMC 2 cut(s) 359, 556
BseX3I CGGCCG 2 cut(s) 467, 780
BseXI GCAGC 3 cut(s) 45, 514, 577
BseYI CCCAGC 2 cut(s) 273, 555
Bsh1236I CGCG 3 cut(s) 477, 496, 741
Bsh1285I CGRYCG 4 cut(s) 417, 470, 678, 783
BshFI GGCC 4 cut(s) 138, 469, 716, 782
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 4 cut(s) 417, 470, 678, 783
BsiHKAI GWGCWC 2 cut(s) 231, 755
BsiHKCI CYCGRG 3 cut(s) 427, 506, 580
BslFI GGGAC 3 cut(s) 446, 551, 557
BslI CCNNNNNNNGG 8 cut(s) 346, 372, 465, 469, 476, 765, 778, 794
BsmAI GTCTC 1 cut(s) 646
BsmFI GGGAC 3 cut(s) 446, 551, 557
BsnI GGCC 4 cut(s) 138, 469, 716, 782
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 3 cut(s) 427, 506, 580
Bsp1286I GDGCHC 4 cut(s) 231, 359, 556, 755
Bsp13I TCCGGA 1 cut(s) 701
Bsp143I GATC 4 cut(s) 26, 128, 310, 591
BspANI GGCC 4 cut(s) 138, 469, 716, 782
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 701
BspFNI CGCG 3 cut(s) 477, 496, 741
BspLI GGNNCC 6 cut(s) 338, 539, 545, 546, 593, 770
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 586, 599
BspQI GCTCTTC 2 cut(s) 4, 760
BspTNI GGTCTC 1 cut(s) 646
BsrBI CCGCTC 1 cut(s) 487
BsrFI RCCGGY 2 cut(s) 469, 677
BsrI ACTGG 2 cut(s) 402, 454
BssAI RCCGGY 2 cut(s) 469, 677
BssECI CCNNGG 9 cut(s) 79, 427, 464, 494, 581, 634, 647, 720, 794
BssMI GATC 4 cut(s) 26, 128, 310, 591
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 1 cut(s) 647
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 795
Bst4CI ACNGT 2 cut(s) 151, 418
Bst6I CTCTTC 2 cut(s) 4, 760
BstC8I GCNNGC 4 cut(s) 318, 471, 475, 805
BstDEI CTNAG 1 cut(s) 235
BstDSI CCRYGG 2 cut(s) 79, 494
BstFNI CGCG 3 cut(s) 477, 496, 741
BstHHI GCGC 1 cut(s) 727
BstKTI GATC 4 cut(s) 29, 131, 313, 594
BstMAI GTCTC 1 cut(s) 646
BstMBI GATC 4 cut(s) 26, 128, 310, 591
BstMCI CGRYCG 4 cut(s) 417, 470, 678, 783
BstNI CCWGG 1 cut(s) 795
BstSCI CCNGG 7 cut(s) 306, 426, 427, 464, 540, 719, 793
BstSLI GKGCMC 2 cut(s) 359, 556
BstUI CGCG 3 cut(s) 477, 496, 741
BstV1I GCAGC 3 cut(s) 45, 514, 577
BstV2I GAAGAC 1 cut(s) 292
BstX2I RGATCY 1 cut(s) 591
BstYI RGATCY 1 cut(s) 591
BstZI CGGCCG 2 cut(s) 467, 780
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 4 cut(s) 138, 469, 716, 782
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 2 cut(s) 79, 494
BtrI CACGTC 1 cut(s) 745
BtsI GCAGTG 2 cut(s) 333, 359
BtsIMutI CAGTG 2 cut(s) 333, 359
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 318, 471, 475, 805
CaiI CAGNNNCTG 1 cut(s) 765
CfoI GCGC 1 cut(s) 727
Cfr10I RCCGGY 2 cut(s) 469, 677
Cfr13I GGNCC 6 cut(s) 337, 538, 544, 696, 714, 768
Cfr42I CCGCGG 1 cut(s) 497
Cfr9I CCCGGG 1 cut(s) 427
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 399, 672
CviQI GTAC 3 cut(s) 162, 399, 672
DdeI CTNAG 1 cut(s) 235
DpnI GATC 4 cut(s) 28, 130, 312, 593
DpnII GATC 4 cut(s) 26, 128, 310, 591
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 2 cut(s) 467, 780
EagI CGGCCG 2 cut(s) 467, 780
Eam1104I CTCTTC 2 cut(s) 4, 760
EarI CTCTTC 2 cut(s) 4, 760
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 2 cut(s) 467, 780
Eco130I CCWWGG 1 cut(s) 647
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 646
Eco47I GGWCC 5 cut(s) 337, 538, 544, 696, 768
Eco52I CGGCCG 2 cut(s) 467, 780
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 3 cut(s) 427, 506, 580
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 544
EcoRII CCWGG 1 cut(s) 793
EcoT14I CCWWGG 1 cut(s) 647
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 1 cut(s) 647
FaiI YATR 3 cut(s) 47, 264, 668
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FaqI GGGAC 3 cut(s) 446, 551, 557
FauI CCCGC 3 cut(s) 325, 367, 492
FblI GTMKAC 1 cut(s) 413
Fnu4HI GCNGC 9 cut(s) 59, 69, 269, 478, 494, 503, 566, 717, 763
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 9 cut(s) 59, 69, 269, 478, 494, 503, 566, 717, 763
FspBI CTAG 1 cut(s) 102
GlaI GCGC 1 cut(s) 726
GluI GCNGC 9 cut(s) 59, 69, 269, 478, 494, 503, 566, 717, 763
GsaI CCCAGC 2 cut(s) 277, 559
HaeIII GGCC 4 cut(s) 138, 469, 716, 782
HhaI GCGC 1 cut(s) 727
Hin6I GCGC 1 cut(s) 725
HinP1I GCGC 1 cut(s) 725
HincII GTYRAC 1 cut(s) 414
HindII GTYRAC 1 cut(s) 414
HinfI GANTC 4 cut(s) 175, 368, 385, 410
HphI GGTGA 2 cut(s) 508, 636
Hpy166II GTNNAC 3 cut(s) 414, 516, 644
Hpy188I TCNGA 5 cut(s) 94, 174, 367, 384, 409
Hpy188III TCNNGA 3 cut(s) 536, 580, 702
Hpy8I GTNNAC 3 cut(s) 414, 516, 644
Hpy99I CGWCG 3 cut(s) 44, 531, 746
HpyAV CCTTC 2 cut(s) 17, 436
HpyCH4III ACNGT 2 cut(s) 151, 418
HpyCH4IV ACGT 3 cut(s) 39, 260, 744
HpyF3I CTNAG 1 cut(s) 235
HpySE526I ACGT 3 cut(s) 39, 260, 744
HspAI GCGC 1 cut(s) 725
KflI GGGWCCC 1 cut(s) 544
Kpn2I TCCGGA 1 cut(s) 701
KroI GCCGGC 1 cut(s) 469
KroNI GCCGGC 1 cut(s) 471
KspI CCGCGG 1 cut(s) 497
Kzo9I GATC 4 cut(s) 26, 128, 310, 591
LguI GCTCTTC 2 cut(s) 4, 760
LmnI GCTCC 1 cut(s) 445
Lsp1109I GCAGC 3 cut(s) 45, 514, 577
LweI GCATC 1 cut(s) 649
MaeI CTAG 1 cut(s) 102
MaeII ACGT 3 cut(s) 39, 260, 744
MaeIII GTNAC 2 cut(s) 83, 585
MalI GATC 4 cut(s) 28, 130, 312, 593
MbiI CCGCTC 1 cut(s) 487
MboI GATC 4 cut(s) 26, 128, 310, 591
MboII GAAGA 3 cut(s) 21, 292, 747
MflI RGATCY 1 cut(s) 591
MhlI GDGCHC 4 cut(s) 231, 359, 556, 755
MluCI AATT 1 cut(s) 110
MlyI GAGTC 1 cut(s) 419
MmeI TCCRAC 1 cut(s) 117
MnlI CCTC 8 cut(s) 109, 340, 373, 571, 576, 629, 709, 786
MroI TCCGGA 1 cut(s) 701
MroNI GCCGGC 1 cut(s) 469
MseI TTAA 3 cut(s) 108, 257, 811
MspA1I CMGCKG 2 cut(s) 496, 765
MspR9I CCNGG 7 cut(s) 308, 428, 429, 466, 542, 721, 795
MvaI CCWGG 1 cut(s) 795
MvnI CGCG 3 cut(s) 477, 496, 741
NaeI GCCGGC 1 cut(s) 471
NciI CCSGG 6 cut(s) 308, 428, 429, 466, 542, 721
NdeII GATC 4 cut(s) 26, 128, 310, 591
NgoMIV GCCGGC 1 cut(s) 469
NlaIV GGNNCC 6 cut(s) 338, 539, 545, 546, 593, 770
NmeAIII GCCGAG 1 cut(s) 808
PaeR7I CTCGAG 1 cut(s) 506
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 760
PdiI GCCGGC 1 cut(s) 471
PfeI GAWTC 3 cut(s) 175, 368, 385
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 765
PkrI GCNGC 9 cut(s) 60, 70, 270, 479, 495, 504, 567, 718, 764
PleI GAGTC 1 cut(s) 418
PpsI GAGTC 1 cut(s) 418
PpuMI RGGWCCY 1 cut(s) 544
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 544
Psp6I CCWGG 1 cut(s) 793
PspFI CCCAGC 2 cut(s) 273, 555
PspGI CCWGG 1 cut(s) 793
PspN4I GGNNCC 6 cut(s) 338, 539, 545, 546, 593, 770
PspPI GGNCC 6 cut(s) 337, 538, 544, 696, 714, 768
PspPPI RGGWCCY 1 cut(s) 544
PspXI VCTCGAGB 1 cut(s) 506
PstNI CAGNNNCTG 1 cut(s) 765
PsuI RGATCY 1 cut(s) 591
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 400, 673
RsaNI GTAC 3 cut(s) 162, 399, 672
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 497
SalI GTCGAC 1 cut(s) 412
SapI GCTCTTC 2 cut(s) 4, 760
SaqAI TTAA 3 cut(s) 108, 257, 811
SatI GCNGC 9 cut(s) 59, 69, 269, 478, 494, 503, 566, 717, 763
Sau3AI GATC 4 cut(s) 26, 128, 310, 591
Sau96I GGNCC 6 cut(s) 337, 538, 544, 696, 714, 768
SchI GAGTC 1 cut(s) 419
ScrFI CCNGG 7 cut(s) 308, 428, 429, 466, 542, 721, 795
SduI GDGCHC 4 cut(s) 231, 359, 556, 755
SfaNI GCATC 1 cut(s) 649
Sfr274I CTCGAG 1 cut(s) 506
Sfr303I CCGCGG 1 cut(s) 497
SgrBI CCGCGG 1 cut(s) 497
SinI GGWCC 5 cut(s) 337, 538, 544, 696, 768
SlaI CTCGAG 1 cut(s) 506
SmaI CCCGGG 1 cut(s) 429
SmlI CTYRAG 1 cut(s) 506
SmoI CTYRAG 1 cut(s) 506
Sse9I AATT 1 cut(s) 110
SspMI CTAG 1 cut(s) 102
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 7 cut(s) 306, 426, 427, 464, 540, 719, 793
StyI CCWWGG 1 cut(s) 647
TaaI ACNGT 2 cut(s) 151, 418
TaiI ACGT 3 cut(s) 42, 263, 747
TaqI TCGA 4 cut(s) 21, 131, 413, 507
TaqII GACCGA 2 cut(s) 648, 684
TasI AATT 1 cut(s) 110
TauI GCSGC 6 cut(s) 71, 271, 480, 496, 719, 765
TfiI GAWTC 3 cut(s) 175, 368, 385
Tru1I TTAA 3 cut(s) 108, 257, 811
Tru9I TTAA 3 cut(s) 108, 257, 811
TscAI CASTG 2 cut(s) 333, 359
TseI GCWGC 3 cut(s) 58, 502, 565
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 386, 388, 448, 604
TspMI CCCGGG 1 cut(s) 427
TspRI CASTG 2 cut(s) 333, 359
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 765
VpaK11BI GGWCC 5 cut(s) 337, 538, 544, 696, 768
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 506
XmaI CCCGGG 1 cut(s) 427
XmiI GTMKAC 1 cut(s) 413
XspI CTAG 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.