Rroxscaffold_49G00438570

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000049
OG0000098
Physical Location & Seq
Forward (+)
1612 .. 3388
1777 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_49G00438570.1

Sequence Viewer

Length: 801 bp
ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTGCTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACGGATGTGCCGCCCCAGCCAAACTCCCCCACGACAATGTCTTCCGCCGGATCAGCCCGCCGAAGCGGGCTTTGGGTCCAAAAAGAGGGGCGGTGCCCCGCCTCCGATTCACGGAATAAAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGGCCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCGGGGGCGCCGGACACCACGCGACGTGCGGTGCTCTTCCGGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCGGGGTGGGCAGGCTATCTGCACCGACGGCCGCTCCGCCGGGCTCACGCCCCGGTTTTGCGGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCGGCGCGTAGTTGGGCACACGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCTTGGCGTGGCTCAACAAAGCAGCCACGCCGTCCTACCTATTTAAAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

266

Amino Acids

28.85

Weight (kDa)

10.88

Isoelectric Point (pI)

54.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 207
Acc36I ACCTGC 1 cut(s) 207
AccB1I GGYRCC 2 cut(s) 306, 422
AccBSI CCGCTC 1 cut(s) 522
AccII CGCG 5 cut(s) 417, 437, 561, 617, 661
AccIII TCCGGA 1 cut(s) 399
AclWI GGATC 2 cut(s) 91, 271
AcoI YGGCCR 4 cut(s) 372, 456, 517, 599
AcsI RAATTY 1 cut(s) 65
AcyI GRCGYC 1 cut(s) 423
AfaI GTAC 1 cut(s) 370
AflII CTTAAG 1 cut(s) 620
AflIII ACRYGT 1 cut(s) 673
AgsI TTSAA 1 cut(s) 409
AjiI CACGTC 1 cut(s) 441
AjnI CCWGG 1 cut(s) 581
AjuI GAANNNNNNNTTGG 2 cut(s) 268, 300
AluBI AGCT 4 cut(s) 60, 141, 184, 740
AluI AGCT 4 cut(s) 60, 141, 184, 740
Alw21I GWGCWC 3 cut(s) 186, 451, 742
Alw26I GTCTC 1 cut(s) 343
AlwI GGATC 2 cut(s) 91, 271
Aor13HI TCCGGA 1 cut(s) 399
AoxI GGCC 8 cut(s) 91, 372, 412, 456, 517, 579, 599, 727
ApeKI GCWGC 2 cut(s) 13, 770
ApoI RAATTY 1 cut(s) 65
AspLEI GCGC 5 cut(s) 425, 563, 619, 627, 661
AspS9I GGNCC 6 cut(s) 289, 394, 412, 464, 579, 728
AsuC2I CCSGG 6 cut(s) 376, 491, 529, 541, 603, 682
AsuHPI GGTGA 1 cut(s) 333
AvaII GGWCC 3 cut(s) 289, 394, 464
BaeGI GKGCMC 2 cut(s) 311, 673
BanI GGYRCC 2 cut(s) 306, 422
BanII GRGCYC 3 cut(s) 186, 534, 742
BarI GAAGNNNNNNTAC 2 cut(s) 669, 701
BauI CACGAG 1 cut(s) 161
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 3 cut(s) 186, 451, 742
BbvI GCAGC 1 cut(s) 782
BccI CCATC 1 cut(s) 636
BceAI ACGGC 5 cut(s) 387, 468, 532, 614, 763
BciT130I CCWGG 1 cut(s) 583
BcnI CCSGG 6 cut(s) 376, 491, 529, 541, 603, 682
BcoDI GTCTC 1 cut(s) 343
BfaI CTAG 2 cut(s) 57, 644
BfoI RGCGCY 2 cut(s) 426, 628
BfrI CTTAAG 1 cut(s) 620
BfuAI ACCTGC 1 cut(s) 207
BglI GCCNNNNNGGC 2 cut(s) 420, 598
BisI GCNGC 9 cut(s) 14, 224, 415, 459, 520, 550, 559, 657, 771
BlpI GCTNAGC 1 cut(s) 479
BlsI GCNGC 9 cut(s) 15, 225, 416, 460, 521, 551, 560, 658, 772
Bme1390I CCNGG 7 cut(s) 376, 491, 529, 541, 583, 603, 682
Bme18I GGWCC 3 cut(s) 289, 394, 464
BmgBI CACGTC 1 cut(s) 441
BmgT120I GGNCC 6 cut(s) 289, 394, 412, 464, 579, 728
BmiI GGNNCC 5 cut(s) 290, 308, 424, 466, 580
BmrFI CCNGG 7 cut(s) 376, 491, 529, 541, 583, 603, 682
BmsI GCATC 2 cut(s) 346, 710
BpiI GAAGAC 1 cut(s) 246
Bpu1102I GCTNAGC 1 cut(s) 479
BpuMI CCSGG 6 cut(s) 376, 491, 529, 541, 603, 682
Bsa29I ATCGAT 1 cut(s) 86
BsaAI YACGTR 1 cut(s) 676
BsaHI GRCGYC 1 cut(s) 423
BsaI GGTCTC 1 cut(s) 343
BsaJI CCNNGG 5 cut(s) 344, 415, 490, 539, 750
BsaWI WCCGGW 2 cut(s) 399, 688
BsaXI ACNNNNNCTCC 4 cut(s) 456, 486, 506, 536
Bse1I ACTGG 2 cut(s) 24, 707
BseAI TCCGGA 1 cut(s) 399
BseBI CCWGG 1 cut(s) 583
BseCI ATCGAT 1 cut(s) 86
BseDI CCNNGG 5 cut(s) 344, 415, 490, 539, 750
BseGI GGATG 3 cut(s) 223, 628, 694
BseMII CTCAG 1 cut(s) 470
BseNI ACTGG 2 cut(s) 24, 707
BseSI GKGCMC 2 cut(s) 311, 673
BseX3I CGGCCG 4 cut(s) 372, 456, 517, 599
BseXI GCAGC 1 cut(s) 782
BseYI CCCAGC 1 cut(s) 228
BsgI GTGCAG 1 cut(s) 493
Bsh1236I CGCG 5 cut(s) 417, 437, 561, 617, 661
Bsh1285I CGRYCG 5 cut(s) 375, 459, 520, 556, 602
BshFI GGCC 8 cut(s) 93, 374, 414, 458, 519, 581, 601, 729
BshNI GGYRCC 2 cut(s) 306, 422
BshVI ATCGAT 1 cut(s) 86
BsiEI CGRYCG 5 cut(s) 375, 459, 520, 556, 602
BsiHKAI GWGCWC 3 cut(s) 186, 451, 742
BsmAI GTCTC 1 cut(s) 343
BsnI GGCC 8 cut(s) 93, 374, 414, 458, 519, 581, 601, 729
Bso31I GGTCTC 1 cut(s) 343
Bsp1286I GDGCHC 6 cut(s) 186, 311, 451, 534, 673, 742
Bsp13I TCCGGA 1 cut(s) 399
Bsp143I GATC 2 cut(s) 83, 263
Bsp1720I GCTNAGC 1 cut(s) 479
BspANI GGCC 8 cut(s) 93, 374, 414, 458, 519, 581, 601, 729
BspCNI CTCAG 1 cut(s) 471
BspDI ATCGAT 1 cut(s) 86
BspEI TCCGGA 1 cut(s) 399
BspFNI CGCG 5 cut(s) 417, 437, 561, 617, 661
BspLI GGNNCC 5 cut(s) 290, 308, 424, 466, 580
BspMI ACCTGC 1 cut(s) 207
BspPI GGATC 2 cut(s) 91, 271
BspQI GCTCTTC 1 cut(s) 456
BspT107I GGYRCC 2 cut(s) 306, 422
BspTI CTTAAG 1 cut(s) 620
BspTNI GGTCTC 1 cut(s) 343
BsrBI CCGCTC 1 cut(s) 522
BsrI ACTGG 2 cut(s) 24, 707
BssECI CCNNGG 5 cut(s) 344, 415, 490, 539, 750
BssMI GATC 2 cut(s) 83, 263
BssNI GRCGYC 1 cut(s) 423
BssSI CACGAG 1 cut(s) 161
BssT1I CCWWGG 2 cut(s) 344, 750
Bst2BI CACGAG 1 cut(s) 161
Bst2UI CCWGG 1 cut(s) 583
Bst4CI ACNGT 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 456
BstACI GRCGYC 1 cut(s) 423
BstAFI CTTAAG 1 cut(s) 620
BstBAI YACGTR 1 cut(s) 676
BstC8I GCNNGC 3 cut(s) 271, 281, 501
BstDEI CTNAG 2 cut(s) 190, 479
BstDSI CCRYGG 1 cut(s) 415
BstF5I GGATG 3 cut(s) 223, 628, 694
BstFNI CGCG 5 cut(s) 417, 437, 561, 617, 661
BstH2I RGCGCY 2 cut(s) 426, 628
BstHHI GCGC 5 cut(s) 425, 563, 619, 627, 661
BstKTI GATC 2 cut(s) 86, 266
BstMAI GTCTC 1 cut(s) 343
BstMBI GATC 2 cut(s) 83, 263
BstMCI CGRYCG 5 cut(s) 375, 459, 520, 556, 602
BstNI CCWGG 1 cut(s) 583
BstSCI CCNGG 7 cut(s) 374, 489, 527, 539, 581, 601, 680
BstSLI GKGCMC 2 cut(s) 311, 673
BstUI CGCG 5 cut(s) 417, 437, 561, 617, 661
BstV1I GCAGC 1 cut(s) 782
BstV2I GAAGAC 1 cut(s) 246
BstZI CGGCCG 4 cut(s) 372, 456, 517, 599
Bsu15I ATCGAT 1 cut(s) 86
BsuRI GGCC 8 cut(s) 93, 374, 414, 458, 519, 581, 601, 729
BsuTUI ATCGAT 1 cut(s) 86
BtgI CCRYGG 1 cut(s) 415
BtgZI GCGATG 1 cut(s) 687
BtrI CACGTC 1 cut(s) 441
BtsCI GGATG 3 cut(s) 223, 628, 694
BveI ACCTGC 1 cut(s) 207
Cac8I GCNNGC 3 cut(s) 271, 281, 501
CfoI GCGC 5 cut(s) 425, 563, 619, 627, 661
Cfr13I GGNCC 6 cut(s) 289, 394, 412, 464, 579, 728
Cfr42I CCGCGG 1 cut(s) 418
ClaI ATCGAT 1 cut(s) 86
Csp6I GTAC 1 cut(s) 369
CviQI GTAC 1 cut(s) 369
DdeI CTNAG 2 cut(s) 190, 479
DinI GGCGCC 1 cut(s) 424
DpnI GATC 2 cut(s) 85, 265
DpnII GATC 2 cut(s) 83, 263
DraI TTTAAA 2 cut(s) 64, 793
EaeI YGGCCR 4 cut(s) 372, 456, 517, 599
EagI CGGCCG 4 cut(s) 372, 456, 517, 599
Eam1104I CTCTTC 1 cut(s) 456
EarI CTCTTC 1 cut(s) 456
EciI GGCGGA 2 cut(s) 247, 514
Ecl136II GAGCTC 2 cut(s) 184, 740
EclXI CGGCCG 4 cut(s) 372, 456, 517, 599
Eco130I CCWWGG 2 cut(s) 344, 750
Eco24I GRGCYC 3 cut(s) 186, 534, 742
Eco31I GGTCTC 1 cut(s) 343
Eco47I GGWCC 3 cut(s) 289, 394, 464
Eco52I CGGCCG 4 cut(s) 372, 456, 517, 599
Eco53kI GAGCTC 2 cut(s) 184, 740
EcoICRI GAGCTC 2 cut(s) 184, 740
EcoO109I RGGNCCY 1 cut(s) 579
EcoRII CCWGG 1 cut(s) 581
EcoT14I CCWWGG 2 cut(s) 344, 750
EcoT38I GRGCYC 3 cut(s) 186, 534, 742
EgeI GGCGCC 1 cut(s) 424
EheI GGCGCC 1 cut(s) 424
ErhI CCWWGG 2 cut(s) 344, 750
FaiI YATR 2 cut(s) 365, 608
FauI CCCGC 5 cut(s) 272, 278, 319, 410, 706
Fnu4HI GCNGC 9 cut(s) 14, 224, 415, 459, 520, 550, 559, 657, 771
FokI GGATG 3 cut(s) 230, 615, 681
FriOI GRGCYC 3 cut(s) 186, 534, 742
Fsp4HI GCNGC 9 cut(s) 14, 224, 415, 459, 520, 550, 559, 657, 771
FspBI CTAG 2 cut(s) 57, 644
GlaI GCGC 5 cut(s) 424, 562, 618, 626, 660
GluI GCNGC 9 cut(s) 14, 224, 415, 459, 520, 550, 559, 657, 771
GsaI CCCAGC 1 cut(s) 232
HaeII RGCGCY 2 cut(s) 426, 628
HaeIII GGCC 8 cut(s) 93, 374, 414, 458, 519, 581, 601, 729
HhaI GCGC 5 cut(s) 425, 563, 619, 627, 661
Hin1I GRCGYC 1 cut(s) 423
Hin6I GCGC 5 cut(s) 423, 561, 617, 625, 659
HinP1I GCGC 5 cut(s) 423, 561, 617, 625, 659
HinfI GANTC 4 cut(s) 130, 320, 650, 746
HphI GGTGA 1 cut(s) 333
Hpy166II GTNNAC 1 cut(s) 341
Hpy188I TCNGA 3 cut(s) 49, 129, 319
Hpy188III TCNNGA 2 cut(s) 400, 743
Hpy8I GTNNAC 1 cut(s) 341
Hpy99I CGWCG 3 cut(s) 442, 518, 600
HpyCH4III ACNGT 1 cut(s) 106
HpyCH4IV ACGT 2 cut(s) 440, 675
HpyCH4V TGCA 1 cut(s) 510
HpyF3I CTNAG 2 cut(s) 190, 479
HpySE526I ACGT 2 cut(s) 440, 675
Hsp92I GRCGYC 1 cut(s) 423
HspAI GCGC 5 cut(s) 423, 561, 617, 625, 659
KasI GGCGCC 1 cut(s) 422
Kpn2I TCCGGA 1 cut(s) 399
KspI CCGCGG 1 cut(s) 418
Kzo9I GATC 2 cut(s) 83, 263
LguI GCTCTTC 1 cut(s) 456
LmnI GCTCC 2 cut(s) 527, 737
Lsp1109I GCAGC 1 cut(s) 782
LweI GCATC 2 cut(s) 346, 710
MaeI CTAG 2 cut(s) 57, 644
MaeII ACGT 2 cut(s) 440, 675
MaeIII GTNAC 3 cut(s) 38, 611, 676
MalI GATC 2 cut(s) 85, 265
MbiI CCGCTC 1 cut(s) 522
MboI GATC 2 cut(s) 83, 263
MboII GAAGA 2 cut(s) 246, 443
MhlI GDGCHC 6 cut(s) 186, 311, 451, 534, 673, 742
MluCI AATT 1 cut(s) 65
Mly113I GGCGCC 1 cut(s) 423
MnlI CCTC 6 cut(s) 64, 292, 325, 407, 482, 575
MroI TCCGGA 1 cut(s) 399
MseI TTAA 4 cut(s) 63, 212, 621, 792
MslI CAYNNNNRTG 1 cut(s) 248
MspA1I CMGCKG 2 cut(s) 417, 461
MspCI CTTAAG 1 cut(s) 620
MspR9I CCNGG 7 cut(s) 376, 491, 529, 541, 583, 603, 682
MvaI CCWGG 1 cut(s) 583
MvnI CGCG 5 cut(s) 417, 437, 561, 617, 661
NarI GGCGCC 1 cut(s) 423
NciI CCSGG 6 cut(s) 376, 491, 529, 541, 603, 682
NdeII GATC 2 cut(s) 83, 263
NlaIV GGNNCC 5 cut(s) 290, 308, 424, 466, 580
NmuCI GTSAC 1 cut(s) 611
PaqCI CACCTGC 1 cut(s) 207
PciSI GCTCTTC 1 cut(s) 456
PfeI GAWTC 4 cut(s) 130, 320, 650, 746
PflFI GACNNNGTC 1 cut(s) 250
PkrI GCNGC 9 cut(s) 15, 225, 416, 460, 521, 551, 560, 658, 772
PluTI GGCGCC 1 cut(s) 426
Ppu21I YACGTR 1 cut(s) 676
Psp124BI GAGCTC 2 cut(s) 186, 742
Psp6I CCWGG 1 cut(s) 581
PspFI CCCAGC 1 cut(s) 228
PspGI CCWGG 1 cut(s) 581
PspN4I GGNNCC 5 cut(s) 290, 308, 424, 466, 580
PspPI GGNCC 6 cut(s) 289, 394, 412, 464, 579, 728
PsyI GACNNNGTC 1 cut(s) 250
RsaI GTAC 1 cut(s) 370
RsaNI GTAC 1 cut(s) 369
RseI CAYNNNNRTG 1 cut(s) 248
SacI GAGCTC 2 cut(s) 186, 742
SacII CCGCGG 1 cut(s) 418
SapI GCTCTTC 1 cut(s) 456
SaqAI TTAA 4 cut(s) 63, 212, 621, 792
SatI GCNGC 9 cut(s) 14, 224, 415, 459, 520, 550, 559, 657, 771
Sau3AI GATC 2 cut(s) 83, 263
Sau96I GGNCC 6 cut(s) 289, 394, 412, 464, 579, 728
ScrFI CCNGG 7 cut(s) 376, 491, 529, 541, 583, 603, 682
SduI GDGCHC 6 cut(s) 186, 311, 451, 534, 673, 742
SfaNI GCATC 2 cut(s) 346, 710
SfoI GGCGCC 1 cut(s) 424
Sfr303I CCGCGG 1 cut(s) 418
SgrBI CCGCGG 1 cut(s) 418
SinI GGWCC 3 cut(s) 289, 394, 464
SmiMI CAYNNNNRTG 1 cut(s) 248
SmlI CTYRAG 1 cut(s) 620
SmoI CTYRAG 1 cut(s) 620
Sse9I AATT 1 cut(s) 65
SspDI GGCGCC 1 cut(s) 422
SspMI CTAG 2 cut(s) 57, 644
SstI GAGCTC 2 cut(s) 186, 742
StyD4I CCNGG 7 cut(s) 374, 489, 527, 539, 581, 601, 680
StyI CCWWGG 2 cut(s) 344, 750
TaaI ACNGT 1 cut(s) 106
TaiI ACGT 2 cut(s) 443, 678
TaqI TCGA 2 cut(s) 86, 744
TaqII GACCGA 1 cut(s) 382
TasI AATT 1 cut(s) 65
TauI GCSGC 7 cut(s) 226, 417, 461, 522, 552, 561, 659
TfiI GAWTC 4 cut(s) 130, 320, 650, 746
Tru1I TTAA 4 cut(s) 63, 212, 621, 792
Tru9I TTAA 4 cut(s) 63, 212, 621, 792
TseFI GTSAC 1 cut(s) 611
TseI GCWGC 2 cut(s) 13, 770
Tsp45I GTSAC 1 cut(s) 611
TspDTI ATGAA 2 cut(s) 17, 683
TspGWI ACGGA 2 cut(s) 230, 340
Tth111I GACNNNGTC 1 cut(s) 250
Vha464I CTTAAG 1 cut(s) 620
VpaK11BI GGWCC 3 cut(s) 289, 394, 464
XapI RAATTY 1 cut(s) 65
XspI CTAG 2 cut(s) 57, 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.