Rroxscaffold_49G00438700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000049
OG0000098
Physical Location & Seq
Reverse (-)
88287 .. 89198
912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_49G00438700.1

Sequence Viewer

Length: 582 bp
ATGTCTTCCGCCGGATCAGCCCGCCGAAGCAGGCTTTGGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCTCGGATTCCCCTTGTCCGTACCAGTTCGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

193

Amino Acids

21.21

Weight (kDa)

11.02

Isoelectric Point (pI)

67.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 521
AccBSI CCGCTC 1 cut(s) 241
AccI GTMKAC 1 cut(s) 167
AccII CGCG 3 cut(s) 231, 250, 497
AccIII TCCGGA 1 cut(s) 456
AclWI GGATC 3 cut(s) 22, 339, 352
AcoI YGGCCR 1 cut(s) 221
AfaI GTAC 2 cut(s) 155, 427
AfiI CCNNNNNNNGG 4 cut(s) 230, 521, 534, 550
AgsI TTSAA 2 cut(s) 176, 466
AjiI CACGTC 1 cut(s) 501
AjnI CCWGG 1 cut(s) 549
AjuI GAANNNNNNNTTGG 2 cut(s) 19, 51
AluBI AGCT 2 cut(s) 96, 259
AluI AGCT 2 cut(s) 96, 259
Alw21I GWGCWC 1 cut(s) 511
Alw26I GTCTC 1 cut(s) 400
AlwI GGATC 3 cut(s) 22, 339, 352
AlwNI CAGNNNCTG 2 cut(s) 393, 521
Ama87I CYCGRG 4 cut(s) 181, 260, 316, 333
Aor13HI TCCGGA 1 cut(s) 456
AoxI GGCC 2 cut(s) 221, 469
ApeKI GCWGC 1 cut(s) 256
AspLEI GCGC 1 cut(s) 483
AspS9I GGNCC 4 cut(s) 298, 451, 469, 524
AsuC2I CCSGG 5 cut(s) 182, 183, 220, 433, 476
AsuHPI GGTGA 2 cut(s) 262, 390
AvaI CYCGRG 4 cut(s) 181, 260, 316, 333
AvaII GGWCC 3 cut(s) 298, 451, 524
BaeGI GKGCMC 1 cut(s) 310
BamHI GGATCC 1 cut(s) 344
BanII GRGCYC 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 99
Bbv12I GWGCWC 1 cut(s) 511
BbvI GCAGC 1 cut(s) 268
BceAI ACGGC 1 cut(s) 528
BciT130I CCWGG 1 cut(s) 551
BcnI CCSGG 5 cut(s) 182, 183, 220, 433, 476
BcoDI GTCTC 1 cut(s) 400
BfaI CTAG 1 cut(s) 86
BisI GCNGC 5 cut(s) 232, 248, 257, 472, 519
BlpI GCTNAGC 1 cut(s) 539
BlsI GCNGC 5 cut(s) 233, 249, 258, 473, 520
Bme1390I CCNGG 6 cut(s) 182, 183, 220, 433, 476, 551
Bme18I GGWCC 3 cut(s) 298, 451, 524
BmeT110I CYCGRG 4 cut(s) 181, 260, 316, 333
BmgBI CACGTC 1 cut(s) 501
BmgT120I GGNCC 4 cut(s) 298, 451, 469, 524
BmiI GGNNCC 5 cut(s) 42, 299, 300, 346, 526
BmrFI CCNGG 6 cut(s) 182, 183, 220, 433, 476, 551
BmrI ACTGGG 2 cut(s) 203, 304
BmsI GCATC 1 cut(s) 403
BmuI ACTGGG 2 cut(s) 203, 304
BoxI GACNNNNGTC 1 cut(s) 88
BpiI GAAGAC 1 cut(s) 99
BplI GAGNNNNNCTC 2 cut(s) 80, 112
Bpu1102I GCTNAGC 1 cut(s) 539
BpuEI CTTGAG 1 cut(s) 47
BpuMI CCSGG 5 cut(s) 182, 183, 220, 433, 476
BsaI GGTCTC 1 cut(s) 400
BsaJI CCNNGG 9 cut(s) 135, 181, 182, 218, 248, 334, 401, 475, 550
BsaWI WCCGGW 2 cut(s) 456, 485
BsaXI ACNNNNNCTCC 2 cut(s) 516, 546
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 521, 534, 550
Bse118I RCCGGY 1 cut(s) 223
Bse1I ACTGG 3 cut(s) 157, 209, 299
BseAI TCCGGA 1 cut(s) 456
BseBI CCWGG 1 cut(s) 551
BseDI CCNNGG 9 cut(s) 135, 181, 182, 218, 248, 334, 401, 475, 550
BseLI CCNNNNNNNGG 4 cut(s) 230, 521, 534, 550
BseMII CTCAG 1 cut(s) 530
BseNI ACTGG 3 cut(s) 157, 209, 299
BseSI GKGCMC 1 cut(s) 310
BseX3I CGGCCG 1 cut(s) 221
BseXI GCAGC 1 cut(s) 268
BseYI CCCAGC 1 cut(s) 309
Bsh1236I CGCG 3 cut(s) 231, 250, 497
Bsh1285I CGRYCG 2 cut(s) 224, 432
BshFI GGCC 2 cut(s) 223, 471
BsiEI CGRYCG 2 cut(s) 224, 432
BsiHKAI GWGCWC 1 cut(s) 511
BsiHKCI CYCGRG 4 cut(s) 181, 260, 316, 333
BsiSI CCGG 9 cut(s) 12, 182, 220, 224, 432, 457, 475, 486, 535
BslFI GGGAC 3 cut(s) 201, 305, 311
BslI CCNNNNNNNGG 4 cut(s) 230, 521, 534, 550
BsmAI GTCTC 1 cut(s) 400
BsmFI GGGAC 3 cut(s) 201, 305, 311
BsnI GGCC 2 cut(s) 223, 471
Bso31I GGTCTC 1 cut(s) 400
BsoBI CYCGRG 4 cut(s) 181, 260, 316, 333
Bsp1286I GDGCHC 3 cut(s) 43, 310, 511
Bsp13I TCCGGA 1 cut(s) 456
Bsp143I GATC 2 cut(s) 14, 344
Bsp1720I GCTNAGC 1 cut(s) 539
BspANI GGCC 2 cut(s) 223, 471
BspCNI CTCAG 1 cut(s) 531
BspEI TCCGGA 1 cut(s) 456
BspFNI CGCG 3 cut(s) 231, 250, 497
BspLI GGNNCC 5 cut(s) 42, 299, 300, 346, 526
BspPI GGATC 3 cut(s) 22, 339, 352
BspQI GCTCTTC 1 cut(s) 516
BspTNI GGTCTC 1 cut(s) 400
BsrBI CCGCTC 1 cut(s) 241
BsrFI RCCGGY 1 cut(s) 223
BsrI ACTGG 3 cut(s) 157, 209, 299
BssAI RCCGGY 1 cut(s) 223
BssECI CCNNGG 9 cut(s) 135, 181, 182, 218, 248, 334, 401, 475, 550
BssMI GATC 2 cut(s) 14, 344
BssT1I CCWWGG 1 cut(s) 401
Bst2UI CCWGG 1 cut(s) 551
Bst4CI ACNGT 1 cut(s) 172
Bst6I CTCTTC 1 cut(s) 516
BstC8I GCNNGC 5 cut(s) 22, 32, 225, 229, 561
BstDEI CTNAG 1 cut(s) 539
BstDSI CCRYGG 1 cut(s) 248
BstFNI CGCG 3 cut(s) 231, 250, 497
BstHHI GCGC 1 cut(s) 483
BstKTI GATC 2 cut(s) 17, 347
BstMAI GTCTC 1 cut(s) 400
BstMBI GATC 2 cut(s) 14, 344
BstMCI CGRYCG 2 cut(s) 224, 432
BstMWI GCNNNNNNNGC 9 cut(s) 17, 125, 247, 253, 256, 262, 442, 480, 515
BstNI CCWGG 1 cut(s) 551
BstPAI GACNNNNGTC 1 cut(s) 88
BstSCI CCNGG 6 cut(s) 180, 181, 218, 431, 474, 549
BstSLI GKGCMC 1 cut(s) 310
BstUI CGCG 3 cut(s) 231, 250, 497
BstV1I GCAGC 1 cut(s) 268
BstV2I GAAGAC 1 cut(s) 99
BstX2I RGATCY 1 cut(s) 344
BstYI RGATCY 1 cut(s) 344
BstZI CGGCCG 1 cut(s) 221
BsuRI GGCC 2 cut(s) 223, 471
BtgI CCRYGG 1 cut(s) 248
BtrI CACGTC 1 cut(s) 501
Cac8I GCNNGC 5 cut(s) 22, 32, 225, 229, 561
CaiI CAGNNNCTG 2 cut(s) 393, 521
CfoI GCGC 1 cut(s) 483
Cfr10I RCCGGY 1 cut(s) 223
Cfr13I GGNCC 4 cut(s) 298, 451, 469, 524
Cfr42I CCGCGG 1 cut(s) 251
Cfr9I CCCGGG 1 cut(s) 181
Csp6I GTAC 2 cut(s) 154, 426
CviQI GTAC 2 cut(s) 154, 426
DdeI CTNAG 1 cut(s) 539
DpnI GATC 2 cut(s) 16, 346
DpnII GATC 2 cut(s) 14, 344
EaeI YGGCCR 1 cut(s) 221
EagI CGGCCG 1 cut(s) 221
Eam1104I CTCTTC 1 cut(s) 516
EarI CTCTTC 1 cut(s) 516
EclXI CGGCCG 1 cut(s) 221
Eco130I CCWWGG 1 cut(s) 401
Eco24I GRGCYC 1 cut(s) 43
Eco31I GGTCTC 1 cut(s) 400
Eco47I GGWCC 3 cut(s) 298, 451, 524
Eco52I CGGCCG 1 cut(s) 221
Eco88I CYCGRG 4 cut(s) 181, 260, 316, 333
EcoO109I RGGNCCY 1 cut(s) 298
EcoRII CCWGG 1 cut(s) 549
EcoT14I CCWWGG 1 cut(s) 401
EcoT38I GRGCYC 1 cut(s) 43
ErhI CCWWGG 1 cut(s) 401
FaiI YATR 2 cut(s) 51, 422
FaqI GGGAC 3 cut(s) 201, 305, 311
FauI CCCGC 3 cut(s) 29, 124, 246
FblI GTMKAC 1 cut(s) 167
Fnu4HI GCNGC 5 cut(s) 232, 248, 257, 472, 519
FriOI GRGCYC 1 cut(s) 43
Fsp4HI GCNGC 5 cut(s) 232, 248, 257, 472, 519
FspBI CTAG 1 cut(s) 86
GlaI GCGC 1 cut(s) 482
GluI GCNGC 5 cut(s) 232, 248, 257, 472, 519
GsaI CCCAGC 1 cut(s) 313
HaeIII GGCC 2 cut(s) 223, 471
HapII CCGG 9 cut(s) 12, 182, 220, 224, 432, 457, 475, 486, 535
HhaI GCGC 1 cut(s) 483
Hin6I GCGC 1 cut(s) 481
HinP1I GCGC 1 cut(s) 481
HincII GTYRAC 1 cut(s) 168
HindII GTYRAC 1 cut(s) 168
HinfI GANTC 4 cut(s) 89, 122, 140, 164
HpaII CCGG 9 cut(s) 12, 182, 220, 224, 432, 457, 475, 486, 535
HphI GGTGA 2 cut(s) 262, 390
Hpy166II GTNNAC 3 cut(s) 168, 270, 398
Hpy188I TCNGA 2 cut(s) 83, 139
Hpy188III TCNNGA 3 cut(s) 290, 333, 457
Hpy8I GTNNAC 3 cut(s) 168, 270, 398
Hpy99I CGWCG 2 cut(s) 285, 502
HpyAV CCTTC 1 cut(s) 191
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4IV ACGT 1 cut(s) 500
HpyF10VI GCNNNNNNNGC 9 cut(s) 17, 125, 247, 253, 256, 262, 442, 480, 515
HpyF3I CTNAG 1 cut(s) 539
HpySE526I ACGT 1 cut(s) 500
HspAI GCGC 1 cut(s) 481
KflI GGGWCCC 1 cut(s) 298
Kpn2I TCCGGA 1 cut(s) 456
KroI GCCGGC 1 cut(s) 223
KroNI GCCGGC 1 cut(s) 225
KspI CCGCGG 1 cut(s) 251
Kzo9I GATC 2 cut(s) 14, 344
LguI GCTCTTC 1 cut(s) 516
LmnI GCTCC 2 cut(s) 46, 200
Lsp1109I GCAGC 1 cut(s) 268
LweI GCATC 1 cut(s) 403
MaeI CTAG 1 cut(s) 86
MaeII ACGT 1 cut(s) 500
MaeIII GTNAC 1 cut(s) 338
MalI GATC 2 cut(s) 16, 346
MbiI CCGCTC 1 cut(s) 241
MboI GATC 2 cut(s) 14, 344
MboII GAAGA 2 cut(s) 99, 503
MflI RGATCY 1 cut(s) 344
MhlI GDGCHC 3 cut(s) 43, 310, 511
MlyI GAGTC 2 cut(s) 98, 173
MmeI TCCRAC 1 cut(s) 61
MnlI CCTC 7 cut(s) 69, 145, 325, 329, 383, 464, 542
MroI TCCGGA 1 cut(s) 456
MroNI GCCGGC 1 cut(s) 223
MseI TTAA 1 cut(s) 567
MspA1I CMGCKG 3 cut(s) 119, 250, 521
MspI CCGG 9 cut(s) 12, 182, 220, 224, 432, 457, 475, 486, 535
MspR9I CCNGG 6 cut(s) 182, 183, 220, 433, 476, 551
MvaI CCWGG 1 cut(s) 551
MvnI CGCG 3 cut(s) 231, 250, 497
MwoI GCNNNNNNNGC 9 cut(s) 17, 125, 247, 253, 256, 262, 442, 480, 515
NaeI GCCGGC 1 cut(s) 225
NciI CCSGG 5 cut(s) 182, 183, 220, 433, 476
NdeII GATC 2 cut(s) 14, 344
NgoMIV GCCGGC 1 cut(s) 223
NlaIV GGNNCC 5 cut(s) 42, 299, 300, 346, 526
PaeR7I CTCGAG 2 cut(s) 260, 316
PciSI GCTCTTC 1 cut(s) 516
PdiI GCCGGC 1 cut(s) 225
PfeI GAWTC 2 cut(s) 122, 140
PflMI CCANNNNNTGG 1 cut(s) 521
PkrI GCNGC 5 cut(s) 233, 249, 258, 473, 520
PleI GAGTC 2 cut(s) 97, 172
PpsI GAGTC 2 cut(s) 97, 172
PpuMI RGGWCCY 1 cut(s) 298
PshAI GACNNNNGTC 1 cut(s) 88
Psp5II RGGWCCY 1 cut(s) 298
Psp6I CCWGG 1 cut(s) 549
PspFI CCCAGC 1 cut(s) 309
PspGI CCWGG 1 cut(s) 549
PspN4I GGNNCC 5 cut(s) 42, 299, 300, 346, 526
PspPI GGNCC 4 cut(s) 298, 451, 469, 524
PspPPI RGGWCCY 1 cut(s) 298
PspXI VCTCGAGB 2 cut(s) 260, 316
PstNI CAGNNNCTG 2 cut(s) 393, 521
PsuI RGATCY 1 cut(s) 344
RsaI GTAC 2 cut(s) 155, 427
RsaNI GTAC 2 cut(s) 154, 426
SacII CCGCGG 1 cut(s) 251
SalI GTCGAC 1 cut(s) 166
SapI GCTCTTC 1 cut(s) 516
SaqAI TTAA 1 cut(s) 567
SatI GCNGC 5 cut(s) 232, 248, 257, 472, 519
Sau3AI GATC 2 cut(s) 14, 344
Sau96I GGNCC 4 cut(s) 298, 451, 469, 524
SchI GAGTC 2 cut(s) 98, 173
ScrFI CCNGG 6 cut(s) 182, 183, 220, 433, 476, 551
SduI GDGCHC 3 cut(s) 43, 310, 511
SetI ASST 8 cut(s) 61, 98, 261, 340, 403, 412, 503, 534
SfaNI GCATC 1 cut(s) 403
Sfr274I CTCGAG 2 cut(s) 260, 316
Sfr303I CCGCGG 1 cut(s) 251
SgrBI CCGCGG 1 cut(s) 251
SinI GGWCC 3 cut(s) 298, 451, 524
SlaI CTCGAG 2 cut(s) 260, 316
SmaI CCCGGG 1 cut(s) 183
SmlI CTYRAG 3 cut(s) 62, 260, 316
SmoI CTYRAG 3 cut(s) 62, 260, 316
SspMI CTAG 1 cut(s) 86
StyD4I CCNGG 6 cut(s) 180, 181, 218, 431, 474, 549
StyI CCWWGG 1 cut(s) 401
TaaI ACNGT 1 cut(s) 172
TaiI ACGT 1 cut(s) 503
TaqI TCGA 4 cut(s) 162, 167, 261, 317
TaqII GACCGA 1 cut(s) 439
TauI GCSGC 4 cut(s) 234, 250, 474, 521
TfiI GAWTC 2 cut(s) 122, 140
Tru1I TTAA 1 cut(s) 567
Tru9I TTAA 1 cut(s) 567
TseI GCWGC 1 cut(s) 256
TspGWI ACGGA 3 cut(s) 141, 203, 357
TspMI CCCGGG 1 cut(s) 181
Van91I CCANNNNNTGG 1 cut(s) 521
VpaK11BI GGWCC 3 cut(s) 298, 451, 524
XhoI CTCGAG 2 cut(s) 260, 316
XmaI CCCGGG 1 cut(s) 181
XmiI GTMKAC 1 cut(s) 167
XspI CTAG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.