Rroxscaffold_55G00450050

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000055
OG0000098
Physical Location & Seq
Forward (+)
17898 .. 19082
1185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_55G00450050.1

Sequence Viewer

Length: 621 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTATCCCCGTGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGCCGATTCTCGCCAAGCCCGTTCCCTTGGCGTGTCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCGTCCGTCCCCCGGCCGCACGCGGCGACCCGCTCTCGCCGCGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGATCGGGACCCCGTGCCCAGCCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCTTGCCTACATTGTTCCATTGACCGCAGGTCGTTCACCTTGGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCGCCCGCCGGACCCTACCTCCCGCCGAGCCGTTTCCTGTGGTGGGTGTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

206

Amino Acids

22.98

Weight (kDa)

11.37

Isoelectric Point (pI)

76.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 434
AccBSI CCGCTC 1 cut(s) 296
AccI GTMKAC 1 cut(s) 223
AccII CGCG 3 cut(s) 286, 305, 550
AccIII TCCGGA 1 cut(s) 510
AclWI GGATC 4 cut(s) 34, 354, 394, 407
AcoI YGGCCR 1 cut(s) 277
AfaI GTAC 2 cut(s) 211, 482
AfiI CCNNNNNNNGG 3 cut(s) 275, 574, 609
AgsI TTSAA 2 cut(s) 232, 520
AhdI GACNNNNNGTC 1 cut(s) 444
AjiI CACGTC 1 cut(s) 554
AluBI AGCT 2 cut(s) 138, 313
AluI AGCT 2 cut(s) 138, 313
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 1 cut(s) 455
AlwI GGATC 4 cut(s) 34, 354, 394, 407
Ama87I CYCGRG 4 cut(s) 217, 237, 314, 388
Aor13HI TCCGGA 1 cut(s) 510
AoxI GGCC 2 cut(s) 277, 523
ApeKI GCWGC 3 cut(s) 58, 310, 373
AspLEI GCGC 1 cut(s) 536
AspS9I GGNCC 4 cut(s) 352, 505, 523, 577
AsuC2I CCSGG 4 cut(s) 238, 239, 276, 530
AsuHPI GGTGA 2 cut(s) 316, 444
AvaI CYCGRG 4 cut(s) 217, 237, 314, 388
AvaII GGWCC 3 cut(s) 352, 505, 577
BaeGI GKGCMC 1 cut(s) 363
BamHI GGATCC 1 cut(s) 399
BbsI GAAGAC 1 cut(s) 140
Bbv12I GWGCWC 1 cut(s) 564
BbvI GCAGC 3 cut(s) 45, 322, 385
BceAI ACGGC 1 cut(s) 581
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BcnI CCSGG 4 cut(s) 238, 239, 276, 530
BcoDI GTCTC 1 cut(s) 455
BfaI CTAG 1 cut(s) 128
BfuAI ACCTGC 1 cut(s) 434
BglI GCCNNNNNGGC 1 cut(s) 531
BisI GCNGC 8 cut(s) 59, 69, 280, 287, 303, 311, 374, 526
BlsI GCNGC 8 cut(s) 60, 70, 281, 288, 304, 312, 375, 527
Bme1390I CCNGG 4 cut(s) 238, 239, 276, 530
Bme18I GGWCC 3 cut(s) 352, 505, 577
BmeRI GACNNNNNGTC 1 cut(s) 444
BmeT110I CYCGRG 4 cut(s) 217, 237, 314, 388
BmgBI CACGTC 1 cut(s) 554
BmgT120I GGNCC 4 cut(s) 352, 505, 523, 577
BmiI GGNNCC 5 cut(s) 84, 353, 354, 401, 579
BmrFI CCNGG 4 cut(s) 238, 239, 276, 530
BmsI GCATC 1 cut(s) 458
BoxI GACNNNNGTC 1 cut(s) 130
BpiI GAAGAC 1 cut(s) 140
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpuEI CTTGAG 1 cut(s) 89
BpuMI CCSGG 4 cut(s) 238, 239, 276, 530
BsaI GGTCTC 1 cut(s) 455
BsaJI CCNNGG 8 cut(s) 78, 183, 237, 238, 274, 389, 455, 529
BsaWI WCCGGW 2 cut(s) 510, 538
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 3 cut(s) 275, 574, 609
Bse118I RCCGGY 1 cut(s) 486
BseAI TCCGGA 1 cut(s) 510
BseDI CCNNGG 8 cut(s) 78, 183, 237, 238, 274, 389, 455, 529
BseLI CCNNNNNNNGG 3 cut(s) 275, 574, 609
BseSI GKGCMC 1 cut(s) 363
BseX3I CGGCCG 1 cut(s) 277
BseXI GCAGC 3 cut(s) 45, 322, 385
BseYI CCCAGC 1 cut(s) 362
Bsh1236I CGCG 3 cut(s) 286, 305, 550
Bsh1285I CGRYCG 3 cut(s) 227, 280, 487
BshFI GGCC 2 cut(s) 279, 525
BsiEI CGRYCG 3 cut(s) 227, 280, 487
BsiHKAI GWGCWC 1 cut(s) 564
BsiHKCI CYCGRG 4 cut(s) 217, 237, 314, 388
BsiSI CCGG 7 cut(s) 238, 276, 487, 511, 529, 539, 575
BslFI GGGAC 2 cut(s) 256, 365
BslI CCNNNNNNNGG 3 cut(s) 275, 574, 609
BsmAI GTCTC 1 cut(s) 455
BsmFI GGGAC 2 cut(s) 256, 365
BsnI GGCC 2 cut(s) 279, 525
Bso31I GGTCTC 1 cut(s) 455
BsoBI CYCGRG 4 cut(s) 217, 237, 314, 388
Bsp1286I GDGCHC 2 cut(s) 363, 564
Bsp13I TCCGGA 1 cut(s) 510
Bsp143I GATC 3 cut(s) 26, 346, 399
BspANI GGCC 2 cut(s) 279, 525
BspEI TCCGGA 1 cut(s) 510
BspFNI CGCG 3 cut(s) 286, 305, 550
BspLI GGNNCC 5 cut(s) 84, 353, 354, 401, 579
BspMI ACCTGC 1 cut(s) 434
BspPI GGATC 4 cut(s) 34, 354, 394, 407
BspQI GCTCTTC 2 cut(s) 4, 569
BspTNI GGTCTC 1 cut(s) 455
BsrBI CCGCTC 1 cut(s) 296
BsrFI RCCGGY 1 cut(s) 486
BssAI RCCGGY 1 cut(s) 486
BssECI CCNNGG 8 cut(s) 78, 183, 237, 238, 274, 389, 455, 529
BssMI GATC 3 cut(s) 26, 346, 399
BssT1I CCWWGG 2 cut(s) 183, 455
Bst4CI ACNGT 1 cut(s) 228
Bst6I CTCTTC 2 cut(s) 4, 569
BstC8I GCNNGC 2 cut(s) 284, 572
BstDSI CCRYGG 1 cut(s) 78
BstFNI CGCG 3 cut(s) 286, 305, 550
BstHHI GCGC 1 cut(s) 536
BstKTI GATC 3 cut(s) 29, 349, 402
BstMAI GTCTC 1 cut(s) 455
BstMBI GATC 3 cut(s) 26, 346, 399
BstMCI CGRYCG 3 cut(s) 227, 280, 487
BstMWI GCNNNNNNNGC 5 cut(s) 50, 302, 316, 496, 531
BstPAI GACNNNNGTC 1 cut(s) 130
BstSCI CCNGG 4 cut(s) 236, 237, 274, 528
BstSLI GKGCMC 1 cut(s) 363
BstUI CGCG 3 cut(s) 286, 305, 550
BstV1I GCAGC 3 cut(s) 45, 322, 385
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 1 cut(s) 399
BstYI RGATCY 1 cut(s) 399
BstZI CGGCCG 1 cut(s) 277
BsuRI GGCC 2 cut(s) 279, 525
BtgI CCRYGG 1 cut(s) 78
BtrI CACGTC 1 cut(s) 554
BveI ACCTGC 1 cut(s) 434
Cac8I GCNNGC 2 cut(s) 284, 572
CfoI GCGC 1 cut(s) 536
Cfr10I RCCGGY 1 cut(s) 486
Cfr13I GGNCC 4 cut(s) 352, 505, 523, 577
Cfr9I CCCGGG 1 cut(s) 237
Csp6I GTAC 2 cut(s) 210, 481
CviQI GTAC 2 cut(s) 210, 481
DpnI GATC 3 cut(s) 28, 348, 401
DpnII GATC 3 cut(s) 26, 346, 399
DriI GACNNNNNGTC 1 cut(s) 444
EaeI YGGCCR 1 cut(s) 277
EagI CGGCCG 1 cut(s) 277
Eam1104I CTCTTC 2 cut(s) 4, 569
Eam1105I GACNNNNNGTC 1 cut(s) 444
EarI CTCTTC 2 cut(s) 4, 569
EciI GGCGGA 1 cut(s) 557
EclXI CGGCCG 1 cut(s) 277
Eco130I CCWWGG 2 cut(s) 183, 455
Eco31I GGTCTC 1 cut(s) 455
Eco47I GGWCC 3 cut(s) 352, 505, 577
Eco52I CGGCCG 1 cut(s) 277
Eco88I CYCGRG 4 cut(s) 217, 237, 314, 388
EcoO109I RGGNCCY 1 cut(s) 352
EcoT14I CCWWGG 2 cut(s) 183, 455
ErhI CCWWGG 2 cut(s) 183, 455
FaiI YATR 3 cut(s) 47, 93, 477
FaqI GGGAC 2 cut(s) 256, 365
FauI CCCGC 4 cut(s) 165, 301, 579, 596
FblI GTMKAC 1 cut(s) 223
Fnu4HI GCNGC 8 cut(s) 59, 69, 280, 287, 303, 311, 374, 526
Fsp4HI GCNGC 8 cut(s) 59, 69, 280, 287, 303, 311, 374, 526
FspBI CTAG 1 cut(s) 128
GlaI GCGC 1 cut(s) 535
GluI GCNGC 8 cut(s) 59, 69, 280, 287, 303, 311, 374, 526
GsaI CCCAGC 1 cut(s) 366
HaeIII GGCC 2 cut(s) 279, 525
HapII CCGG 7 cut(s) 238, 276, 487, 511, 529, 539, 575
HhaI GCGC 1 cut(s) 536
Hin6I GCGC 1 cut(s) 534
HinP1I GCGC 1 cut(s) 534
HincII GTYRAC 1 cut(s) 224
HindII GTYRAC 1 cut(s) 224
HinfI GANTC 4 cut(s) 131, 163, 196, 220
HpaII CCGG 7 cut(s) 238, 276, 487, 511, 529, 539, 575
HphI GGTGA 2 cut(s) 316, 444
Hpy166II GTNNAC 3 cut(s) 224, 324, 452
Hpy188I TCNGA 2 cut(s) 125, 195
Hpy188III TCNNGA 4 cut(s) 344, 350, 388, 511
Hpy8I GTNNAC 3 cut(s) 224, 324, 452
Hpy99I CGWCG 3 cut(s) 44, 339, 555
HpyAV CCTTC 2 cut(s) 17, 247
HpyCH4III ACNGT 1 cut(s) 228
HpyCH4IV ACGT 2 cut(s) 39, 553
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 302, 316, 496, 531
HpySE526I ACGT 2 cut(s) 39, 553
HspAI GCGC 1 cut(s) 534
KflI GGGWCCC 1 cut(s) 352
Kpn2I TCCGGA 1 cut(s) 510
Kzo9I GATC 3 cut(s) 26, 346, 399
LguI GCTCTTC 2 cut(s) 4, 569
LmnI GCTCC 2 cut(s) 88, 256
Lsp1109I GCAGC 3 cut(s) 45, 322, 385
LweI GCATC 1 cut(s) 458
MaeI CTAG 1 cut(s) 128
MaeII ACGT 2 cut(s) 39, 553
MaeIII GTNAC 1 cut(s) 393
MalI GATC 3 cut(s) 28, 348, 401
MbiI CCGCTC 1 cut(s) 296
MboI GATC 3 cut(s) 26, 346, 399
MboII GAAGA 3 cut(s) 21, 140, 556
MflI RGATCY 1 cut(s) 399
MhlI GDGCHC 2 cut(s) 363, 564
MlyI GAGTC 2 cut(s) 140, 229
MmeI TCCRAC 2 cut(s) 103, 173
MnlI CCTC 5 cut(s) 111, 379, 384, 518, 595
MroI TCCGGA 1 cut(s) 510
MseI TTAA 1 cut(s) 619
MspI CCGG 7 cut(s) 238, 276, 487, 511, 529, 539, 575
MspR9I CCNGG 4 cut(s) 238, 239, 276, 530
MvnI CGCG 3 cut(s) 286, 305, 550
MwoI GCNNNNNNNGC 5 cut(s) 50, 302, 316, 496, 531
NciI CCSGG 4 cut(s) 238, 239, 276, 530
NdeII GATC 3 cut(s) 26, 346, 399
NlaIV GGNNCC 5 cut(s) 84, 353, 354, 401, 579
NmeAIII GCCGAG 1 cut(s) 617
PaeR7I CTCGAG 1 cut(s) 314
PciSI GCTCTTC 2 cut(s) 4, 569
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PfeI GAWTC 2 cut(s) 163, 196
PkrI GCNGC 8 cut(s) 60, 70, 281, 288, 304, 312, 375, 527
PleI GAGTC 2 cut(s) 139, 228
PpsI GAGTC 2 cut(s) 139, 228
PpuMI RGGWCCY 1 cut(s) 352
PshAI GACNNNNGTC 1 cut(s) 130
Psp5II RGGWCCY 1 cut(s) 352
PspFI CCCAGC 1 cut(s) 362
PspN4I GGNNCC 5 cut(s) 84, 353, 354, 401, 579
PspPI GGNCC 4 cut(s) 352, 505, 523, 577
PspPPI RGGWCCY 1 cut(s) 352
PspXI VCTCGAGB 1 cut(s) 314
PsuI RGATCY 1 cut(s) 399
RsaI GTAC 2 cut(s) 211, 482
RsaNI GTAC 2 cut(s) 210, 481
SalI GTCGAC 1 cut(s) 222
SapI GCTCTTC 2 cut(s) 4, 569
SaqAI TTAA 1 cut(s) 619
SatI GCNGC 8 cut(s) 59, 69, 280, 287, 303, 311, 374, 526
Sau3AI GATC 3 cut(s) 26, 346, 399
Sau96I GGNCC 4 cut(s) 352, 505, 523, 577
SchI GAGTC 2 cut(s) 140, 229
ScrFI CCNGG 4 cut(s) 238, 239, 276, 530
SduI GDGCHC 2 cut(s) 363, 564
SfaNI GCATC 1 cut(s) 458
Sfr274I CTCGAG 1 cut(s) 314
SinI GGWCC 3 cut(s) 352, 505, 577
SlaI CTCGAG 1 cut(s) 314
SmaI CCCGGG 1 cut(s) 239
SmlI CTYRAG 2 cut(s) 104, 314
SmoI CTYRAG 2 cut(s) 104, 314
SspMI CTAG 1 cut(s) 128
StyD4I CCNGG 4 cut(s) 236, 237, 274, 528
StyI CCWWGG 2 cut(s) 183, 455
TaaI ACNGT 1 cut(s) 228
TaiI ACGT 2 cut(s) 42, 556
TaqI TCGA 3 cut(s) 21, 223, 315
TaqII GACCGA 1 cut(s) 493
TauI GCSGC 5 cut(s) 71, 282, 289, 305, 528
TfiI GAWTC 2 cut(s) 163, 196
Tru1I TTAA 1 cut(s) 619
Tru9I TTAA 1 cut(s) 619
TseI GCWGC 3 cut(s) 58, 310, 373
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 3 cut(s) 197, 258, 412
TspMI CCCGGG 1 cut(s) 237
VpaK11BI GGWCC 3 cut(s) 352, 505, 577
XhoI CTCGAG 1 cut(s) 314
XmaI CCCGGG 1 cut(s) 237
XmiI GTMKAC 1 cut(s) 223
XspI CTAG 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.