Rroxscaffold_30G00449540

branched-chain-amino-acid transaminase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000030
OG0000098
Physical Location & Seq
Reverse (-)
34908 .. 35955
1048 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_30G00449540.1

Sequence Viewer

Length: 642 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACGGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGTCGGATTCCCCTTGTCCGTACCAGTTCGAGTCGACTGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCGGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

213

Amino Acids

23.23

Weight (kDa)

9.76

Isoelectric Point (pI)

61.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 460
AccI GTMKAC 1 cut(s) 386
AccII CGCG 2 cut(s) 450, 469
AclI AACGTT 1 cut(s) 209
AclWI GGATC 4 cut(s) 34, 138, 558, 571
AcoI YGGCCR 1 cut(s) 440
AfaI GTAC 1 cut(s) 374
AfiI CCNNNNNNNGG 5 cut(s) 165, 191, 438, 442, 449
AgsI TTSAA 1 cut(s) 395
AjuI GAANNNNNNNTTGG 2 cut(s) 135, 167
AluBI AGCT 2 cut(s) 300, 478
AluI AGCT 2 cut(s) 300, 478
Alw26I GTCTC 1 cut(s) 618
AlwI GGATC 4 cut(s) 34, 138, 558, 571
Ama87I CYCGRG 4 cut(s) 400, 479, 535, 552
AoxI GGCC 1 cut(s) 440
ApeKI GCWGC 2 cut(s) 58, 475
AspS9I GGNCC 3 cut(s) 156, 429, 517
AsuC2I CCSGG 5 cut(s) 128, 401, 402, 427, 439
AsuHPI GGTGA 2 cut(s) 481, 608
AvaI CYCGRG 4 cut(s) 400, 479, 535, 552
AvaII GGWCC 3 cut(s) 156, 429, 517
BaeGI GKGCMC 2 cut(s) 178, 529
BamHI GGATCC 1 cut(s) 563
BbsI GAAGAC 2 cut(s) 112, 303
BbvI GCAGC 2 cut(s) 45, 487
BcnI CCSGG 5 cut(s) 128, 401, 402, 427, 439
BcoDI GTCTC 1 cut(s) 618
BfaI CTAG 1 cut(s) 290
BisI GCNGC 5 cut(s) 59, 89, 451, 467, 476
BlsI GCNGC 5 cut(s) 60, 90, 452, 468, 477
Bme1390I CCNGG 5 cut(s) 128, 401, 402, 427, 439
Bme18I GGWCC 3 cut(s) 156, 429, 517
BmeT110I CYCGRG 4 cut(s) 400, 479, 535, 552
BmgT120I GGNCC 3 cut(s) 156, 429, 517
BmiI GGNNCC 5 cut(s) 157, 246, 518, 519, 565
BmrFI CCNGG 5 cut(s) 128, 401, 402, 427, 439
BmrI ACTGGG 1 cut(s) 523
BmsI GCATC 1 cut(s) 621
BmuI ACTGGG 1 cut(s) 523
BoxI GACNNNNGTC 1 cut(s) 292
BpiI GAAGAC 2 cut(s) 112, 303
BplI GAGNNNNNCTC 2 cut(s) 284, 316
BpuEI CTTGAG 1 cut(s) 251
BpuMI CCSGG 5 cut(s) 128, 401, 402, 427, 439
BsaI GGTCTC 1 cut(s) 618
BsaJI CCNNGG 7 cut(s) 345, 400, 437, 467, 553, 606, 619
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 191, 438, 442, 449
Bse118I RCCGGY 1 cut(s) 442
Bse1I ACTGG 3 cut(s) 69, 376, 518
BseDI CCNNGG 7 cut(s) 345, 400, 437, 467, 553, 606, 619
BseLI CCNNNNNNNGG 5 cut(s) 165, 191, 438, 442, 449
BseNI ACTGG 3 cut(s) 69, 376, 518
BseSI GKGCMC 2 cut(s) 178, 529
BseX3I CGGCCG 1 cut(s) 440
BseXI GCAGC 2 cut(s) 45, 487
BseYI CCCAGC 2 cut(s) 93, 528
Bsh1236I CGCG 2 cut(s) 450, 469
Bsh1285I CGRYCG 1 cut(s) 443
BshFI GGCC 1 cut(s) 442
BsiEI CGRYCG 1 cut(s) 443
BsiHKCI CYCGRG 4 cut(s) 400, 479, 535, 552
BsiSI CCGG 5 cut(s) 128, 401, 427, 439, 443
BslFI GGGAC 3 cut(s) 419, 524, 530
BslI CCNNNNNNNGG 5 cut(s) 165, 191, 438, 442, 449
BsmAI GTCTC 1 cut(s) 618
BsmFI GGGAC 3 cut(s) 419, 524, 530
BsnI GGCC 1 cut(s) 442
Bso31I GGTCTC 1 cut(s) 618
BsoBI CYCGRG 4 cut(s) 400, 479, 535, 552
Bsp1286I GDGCHC 2 cut(s) 178, 529
Bsp143I GATC 3 cut(s) 26, 130, 563
BspANI GGCC 1 cut(s) 442
BspFNI CGCG 2 cut(s) 450, 469
BspLI GGNNCC 5 cut(s) 157, 246, 518, 519, 565
BspPI GGATC 4 cut(s) 34, 138, 558, 571
BspQI GCTCTTC 1 cut(s) 4
BspTNI GGTCTC 1 cut(s) 618
BsrBI CCGCTC 1 cut(s) 460
BsrFI RCCGGY 1 cut(s) 442
BsrI ACTGG 3 cut(s) 69, 376, 518
BssAI RCCGGY 1 cut(s) 442
BssECI CCNNGG 7 cut(s) 345, 400, 437, 467, 553, 606, 619
BssMI GATC 3 cut(s) 26, 130, 563
BssT1I CCWWGG 2 cut(s) 345, 619
Bst4CI ACNGT 1 cut(s) 391
Bst6I CTCTTC 1 cut(s) 4
BstC8I GCNNGC 4 cut(s) 138, 148, 444, 448
BstDSI CCRYGG 1 cut(s) 467
BstFNI CGCG 2 cut(s) 450, 469
BstKTI GATC 3 cut(s) 29, 133, 566
BstMAI GTCTC 1 cut(s) 618
BstMBI GATC 3 cut(s) 26, 130, 563
BstMCI CGRYCG 1 cut(s) 443
BstMWI GCNNNNNNNGC 7 cut(s) 50, 94, 329, 466, 472, 475, 481
BstPAI GACNNNNGTC 1 cut(s) 292
BstSCI CCNGG 5 cut(s) 126, 399, 400, 425, 437
BstSLI GKGCMC 2 cut(s) 178, 529
BstUI CGCG 2 cut(s) 450, 469
BstV1I GCAGC 2 cut(s) 45, 487
BstV2I GAAGAC 2 cut(s) 112, 303
BstX2I RGATCY 1 cut(s) 563
BstYI RGATCY 1 cut(s) 563
BstZI CGGCCG 1 cut(s) 440
BsuRI GGCC 1 cut(s) 442
BtgI CCRYGG 1 cut(s) 467
BtsI GCAGTG 1 cut(s) 178
BtsIMutI CAGTG 1 cut(s) 178
Cac8I GCNNGC 4 cut(s) 138, 148, 444, 448
Cfr10I RCCGGY 1 cut(s) 442
Cfr13I GGNCC 3 cut(s) 156, 429, 517
Cfr42I CCGCGG 1 cut(s) 470
Cfr9I CCCGGG 1 cut(s) 400
CpoI CGGWCCG 1 cut(s) 429
Csp6I GTAC 1 cut(s) 373
CspI CGGWCCG 1 cut(s) 429
CviQI GTAC 1 cut(s) 373
DpnI GATC 3 cut(s) 28, 132, 565
DpnII GATC 3 cut(s) 26, 130, 563
EaeI YGGCCR 1 cut(s) 440
EagI CGGCCG 1 cut(s) 440
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 1 cut(s) 113
EclXI CGGCCG 1 cut(s) 440
Eco130I CCWWGG 2 cut(s) 345, 619
Eco31I GGTCTC 1 cut(s) 618
Eco47I GGWCC 3 cut(s) 156, 429, 517
Eco52I CGGCCG 1 cut(s) 440
Eco88I CYCGRG 4 cut(s) 400, 479, 535, 552
EcoO109I RGGNCCY 1 cut(s) 517
EcoT14I CCWWGG 2 cut(s) 345, 619
ErhI CCWWGG 2 cut(s) 345, 619
FaiI YATR 3 cut(s) 47, 255, 640
FaqI GGGAC 3 cut(s) 419, 524, 530
FauI CCCGC 4 cut(s) 145, 186, 328, 465
FblI GTMKAC 1 cut(s) 386
Fnu4HI GCNGC 5 cut(s) 59, 89, 451, 467, 476
Fsp4HI GCNGC 5 cut(s) 59, 89, 451, 467, 476
FspBI CTAG 1 cut(s) 290
GluI GCNGC 5 cut(s) 59, 89, 451, 467, 476
GsaI CCCAGC 2 cut(s) 97, 532
HaeIII GGCC 1 cut(s) 442
HapII CCGG 5 cut(s) 128, 401, 427, 439, 443
HincII GTYRAC 1 cut(s) 387
HindII GTYRAC 1 cut(s) 387
HinfI GANTC 5 cut(s) 187, 293, 326, 359, 383
HpaII CCGG 5 cut(s) 128, 401, 427, 439, 443
HphI GGTGA 2 cut(s) 481, 608
Hpy166II GTNNAC 3 cut(s) 387, 489, 616
Hpy188I TCNGA 3 cut(s) 186, 287, 358
Hpy188III TCNNGA 2 cut(s) 509, 552
Hpy8I GTNNAC 3 cut(s) 387, 489, 616
Hpy99I CGWCG 2 cut(s) 44, 504
HpyAV CCTTC 3 cut(s) 17, 235, 409
HpyCH4III ACNGT 1 cut(s) 391
HpyCH4IV ACGT 2 cut(s) 39, 209
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 94, 329, 466, 472, 475, 481
HpySE526I ACGT 2 cut(s) 39, 209
KflI GGGWCCC 1 cut(s) 517
KroI GCCGGC 1 cut(s) 442
KroNI GCCGGC 1 cut(s) 444
KspI CCGCGG 1 cut(s) 470
Kzo9I GATC 3 cut(s) 26, 130, 563
LguI GCTCTTC 1 cut(s) 4
LmnI GCTCC 2 cut(s) 250, 418
Lsp1109I GCAGC 2 cut(s) 45, 487
LweI GCATC 1 cut(s) 621
MaeI CTAG 1 cut(s) 290
MaeII ACGT 2 cut(s) 39, 209
MaeIII GTNAC 1 cut(s) 557
MalI GATC 3 cut(s) 28, 132, 565
MbiI CCGCTC 1 cut(s) 460
MboI GATC 3 cut(s) 26, 130, 563
MboII GAAGA 3 cut(s) 21, 112, 303
MflI RGATCY 1 cut(s) 563
MhlI GDGCHC 2 cut(s) 178, 529
MlyI GAGTC 2 cut(s) 302, 392
MmeI TCCRAC 2 cut(s) 265, 336
MnlI CCTC 6 cut(s) 159, 192, 273, 544, 548, 601
MroNI GCCGGC 1 cut(s) 442
MseI TTAA 1 cut(s) 212
MspA1I CMGCKG 2 cut(s) 323, 469
MspI CCGG 5 cut(s) 128, 401, 427, 439, 443
MspR9I CCNGG 5 cut(s) 128, 401, 402, 427, 439
MvnI CGCG 2 cut(s) 450, 469
MwoI GCNNNNNNNGC 7 cut(s) 50, 94, 329, 466, 472, 475, 481
NaeI GCCGGC 1 cut(s) 444
NciI CCSGG 5 cut(s) 128, 401, 402, 427, 439
NdeII GATC 3 cut(s) 26, 130, 563
NgoMIV GCCGGC 1 cut(s) 442
NlaIV GGNNCC 5 cut(s) 157, 246, 518, 519, 565
PaeR7I CTCGAG 2 cut(s) 479, 535
PciSI GCTCTTC 1 cut(s) 4
PdiI GCCGGC 1 cut(s) 444
PfeI GAWTC 3 cut(s) 187, 326, 359
PflFI GACNNNGTC 1 cut(s) 116
PkrI GCNGC 5 cut(s) 60, 90, 452, 468, 477
PleI GAGTC 2 cut(s) 301, 391
PpsI GAGTC 2 cut(s) 301, 391
PpuMI RGGWCCY 1 cut(s) 517
PshAI GACNNNNGTC 1 cut(s) 292
Psp1406I AACGTT 1 cut(s) 209
Psp5II RGGWCCY 1 cut(s) 517
PspFI CCCAGC 2 cut(s) 93, 528
PspN4I GGNNCC 5 cut(s) 157, 246, 518, 519, 565
PspPI GGNCC 3 cut(s) 156, 429, 517
PspPPI RGGWCCY 1 cut(s) 517
PspXI VCTCGAGB 2 cut(s) 479, 535
PsuI RGATCY 1 cut(s) 563
PsyI GACNNNGTC 1 cut(s) 116
RsaI GTAC 1 cut(s) 374
RsaNI GTAC 1 cut(s) 373
Rsr2I CGGWCCG 1 cut(s) 429
RsrII CGGWCCG 1 cut(s) 429
SacII CCGCGG 1 cut(s) 470
SalI GTCGAC 1 cut(s) 385
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 212
SatI GCNGC 5 cut(s) 59, 89, 451, 467, 476
Sau3AI GATC 3 cut(s) 26, 130, 563
Sau96I GGNCC 3 cut(s) 156, 429, 517
SchI GAGTC 2 cut(s) 302, 392
ScrFI CCNGG 5 cut(s) 128, 401, 402, 427, 439
SduI GDGCHC 2 cut(s) 178, 529
SetI ASST 9 cut(s) 42, 112, 212, 265, 302, 480, 559, 621, 630
SfaNI GCATC 1 cut(s) 621
Sfr274I CTCGAG 2 cut(s) 479, 535
Sfr303I CCGCGG 1 cut(s) 470
SgrBI CCGCGG 1 cut(s) 470
SinI GGWCC 3 cut(s) 156, 429, 517
SlaI CTCGAG 2 cut(s) 479, 535
SmaI CCCGGG 1 cut(s) 402
SmlI CTYRAG 3 cut(s) 266, 479, 535
SmoI CTYRAG 3 cut(s) 266, 479, 535
SspMI CTAG 1 cut(s) 290
StyD4I CCNGG 5 cut(s) 126, 399, 400, 425, 437
StyI CCWWGG 2 cut(s) 345, 619
TaaI ACNGT 1 cut(s) 391
TaiI ACGT 2 cut(s) 42, 212
TaqI TCGA 5 cut(s) 21, 381, 386, 480, 536
TaqII GACCGA 1 cut(s) 620
TauI GCSGC 3 cut(s) 91, 453, 469
TfiI GAWTC 3 cut(s) 187, 326, 359
Tru1I TTAA 1 cut(s) 212
Tru9I TTAA 1 cut(s) 212
TscAI CASTG 1 cut(s) 178
TseI GCWGC 2 cut(s) 58, 475
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 207, 360, 421, 576
TspMI CCCGGG 1 cut(s) 400
TspRI CASTG 1 cut(s) 178
Tth111I GACNNNGTC 1 cut(s) 116
VpaK11BI GGWCC 3 cut(s) 156, 429, 517
XhoI CTCGAG 2 cut(s) 479, 535
XmaI CCCGGG 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 386
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.