Rroxscaffold_29G00441680

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000029
OG0000098
Physical Location & Seq
Forward (+)
57926 .. 58424
499 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_29G00441680.1

Sequence Viewer

Length: 459 bp
ATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGTTCGCGCGAGACGCGCTATCAGACGGGGTTACCCAGTCTCTTAGGATCGACTAACCCATGTGCAAGTGCCGTTCACATGGAACCTTTCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCCGGGCTCACGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCACGCGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

152

Amino Acids

16.49

Weight (kDa)

11.39

Isoelectric Point (pI)

67.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 128
AccB7I CCANNNNNTGG 1 cut(s) 81
AccBSI CCGCTC 1 cut(s) 356
AccII CGCG 6 cut(s) 57, 205, 207, 214, 397, 453
AccIII TCCGGA 2 cut(s) 16, 130
AciI CCGC 8 cut(s) 32, 64, 79, 119, 354, 359, 392, 395
AclI AACGTT 1 cut(s) 143
AclWI GGATC 1 cut(s) 253
AcoI YGGCCR 2 cut(s) 351, 435
AcsI RAATTY 1 cut(s) 175
AcyI GRCGYC 1 cut(s) 125
AfiI CCNNNNNNNGG 7 cut(s) 81, 94, 110, 165, 171, 437, 444
AgsI TTSAA 3 cut(s) 26, 303, 317
AjiI CACGTC 2 cut(s) 61, 162
AjnI CCWGG 3 cut(s) 109, 375, 417
Alw21I GWGCWC 1 cut(s) 71
Alw26I GTCTC 3 cut(s) 132, 203, 242
AlwI GGATC 1 cut(s) 253
AlwNI CAGNNNCTG 1 cut(s) 81
Ama87I CYCGRG 1 cut(s) 362
Aor13HI TCCGGA 2 cut(s) 16, 130
AoxI GGCC 6 cut(s) 29, 113, 296, 351, 415, 435
ApaI GGGCCC 1 cut(s) 117
ApeKI GCWGC 1 cut(s) 385
ApoI RAATTY 1 cut(s) 175
AspLEI GCGC 5 cut(s) 43, 207, 216, 399, 455
AspS9I GGNCC 6 cut(s) 11, 29, 84, 113, 114, 415
AsuC2I CCSGG 5 cut(s) 36, 166, 363, 364, 439
AsuII TTCGAA 1 cut(s) 196
AvaI CYCGRG 1 cut(s) 362
AvaII GGWCC 2 cut(s) 11, 84
BaeGI GKGCMC 1 cut(s) 117
BanII GRGCYC 2 cut(s) 117, 369
Bbv12I GWGCWC 1 cut(s) 71
BbvI GCAGC 1 cut(s) 397
BceAI ACGGC 5 cut(s) 88, 133, 254, 366, 450
BciT130I CCWGG 3 cut(s) 111, 377, 419
BcnI CCSGG 5 cut(s) 36, 166, 363, 364, 439
BcoDI GTCTC 3 cut(s) 132, 203, 242
BglI GCCNNNNNGGC 1 cut(s) 434
BglII AGATCT 1 cut(s) 338
BisI GCNGC 5 cut(s) 32, 79, 354, 386, 395
BlpI GCTNAGC 1 cut(s) 99
BlsI GCNGC 5 cut(s) 33, 80, 355, 387, 396
Bme1390I CCNGG 8 cut(s) 36, 111, 166, 363, 364, 377, 419, 439
Bme18I GGWCC 2 cut(s) 11, 84
BmeT110I CYCGRG 1 cut(s) 362
BmgBI CACGTC 2 cut(s) 61, 162
BmgT120I GGNCC 6 cut(s) 11, 29, 84, 113, 114, 415
BmiI GGNNCC 5 cut(s) 86, 115, 116, 282, 416
BmrFI CCNGG 8 cut(s) 36, 111, 166, 363, 364, 377, 419, 439
BmrI ACTGGG 1 cut(s) 228
BmuI ACTGGG 1 cut(s) 228
Bpu1102I GCTNAGC 1 cut(s) 99
Bpu14I TTCGAA 1 cut(s) 196
BpuMI CCSGG 5 cut(s) 36, 166, 363, 364, 439
BsaHI GRCGYC 1 cut(s) 125
BsaJI CCNNGG 4 cut(s) 35, 110, 362, 375
BsaWI WCCGGW 3 cut(s) 16, 45, 130
BsaXI ACNNNNNCTCC 4 cut(s) 76, 106, 340, 370
Bsc4I CCNNNNNNNGG 7 cut(s) 81, 94, 110, 165, 171, 437, 444
Bse1I ACTGG 1 cut(s) 234
BseAI TCCGGA 2 cut(s) 16, 130
BseBI CCWGG 3 cut(s) 111, 377, 419
BseDI CCNNGG 4 cut(s) 35, 110, 362, 375
BseLI CCNNNNNNNGG 7 cut(s) 81, 94, 110, 165, 171, 437, 444
BseMII CTCAG 1 cut(s) 90
BseNI ACTGG 1 cut(s) 234
BseSI GKGCMC 1 cut(s) 117
BseX3I CGGCCG 2 cut(s) 351, 435
BseXI GCAGC 1 cut(s) 397
BsgI GTGCAG 1 cut(s) 327
Bsh1236I CGCG 6 cut(s) 57, 205, 207, 214, 397, 453
Bsh1285I CGRYCG 3 cut(s) 354, 392, 438
BshFI GGCC 6 cut(s) 31, 115, 298, 353, 417, 437
BsiEI CGRYCG 3 cut(s) 354, 392, 438
BsiHKAI GWGCWC 1 cut(s) 71
BsiHKCI CYCGRG 1 cut(s) 362
BsiSI CCGG 8 cut(s) 17, 35, 46, 95, 131, 166, 363, 438
BslFI GGGAC 1 cut(s) 148
BslI CCNNNNNNNGG 7 cut(s) 81, 94, 110, 165, 171, 437, 444
BsmAI GTCTC 3 cut(s) 132, 203, 242
BsmBI CGTCTC 2 cut(s) 132, 203
BsmFI GGGAC 1 cut(s) 148
BsnI GGCC 6 cut(s) 31, 115, 298, 353, 417, 437
BsoBI CYCGRG 1 cut(s) 362
Bsp119I TTCGAA 1 cut(s) 196
Bsp120I GGGCCC 1 cut(s) 113
Bsp1286I GDGCHC 3 cut(s) 71, 117, 369
Bsp13I TCCGGA 2 cut(s) 16, 130
Bsp143I GATC 2 cut(s) 245, 338
Bsp1720I GCTNAGC 1 cut(s) 99
BspACI CCGC 8 cut(s) 32, 64, 79, 119, 354, 359, 392, 395
BspANI GGCC 6 cut(s) 31, 115, 298, 353, 417, 437
BspCNI CTCAG 1 cut(s) 91
BspEI TCCGGA 2 cut(s) 16, 130
BspFNI CGCG 6 cut(s) 57, 205, 207, 214, 397, 453
BspLI GGNNCC 5 cut(s) 86, 115, 116, 282, 416
BspPI GGATC 1 cut(s) 253
BspQI GCTCTTC 1 cut(s) 76
BspT104I TTCGAA 1 cut(s) 196
BsrBI CCGCTC 1 cut(s) 356
BsrI ACTGG 1 cut(s) 234
BssECI CCNNGG 4 cut(s) 35, 110, 362, 375
BssMI GATC 2 cut(s) 245, 338
BssNI GRCGYC 1 cut(s) 125
Bst2UI CCWGG 3 cut(s) 111, 377, 419
Bst6I CTCTTC 2 cut(s) 76, 297
BstACI GRCGYC 1 cut(s) 125
BstBI TTCGAA 1 cut(s) 196
BstDEI CTNAG 2 cut(s) 99, 241
BstEII GGTNACC 1 cut(s) 228
BstFNI CGCG 6 cut(s) 57, 205, 207, 214, 397, 453
BstHHI GCGC 5 cut(s) 43, 207, 216, 399, 455
BstKTI GATC 2 cut(s) 248, 341
BstMAI GTCTC 3 cut(s) 132, 203, 242
BstMBI GATC 2 cut(s) 245, 338
BstMCI CGRYCG 3 cut(s) 354, 392, 438
BstMWI GCNNNNNNNGC 8 cut(s) 40, 75, 211, 213, 350, 391, 394, 434
BstNI CCWGG 3 cut(s) 111, 377, 419
BstPI GGTNACC 1 cut(s) 228
BstSCI CCNGG 8 cut(s) 34, 109, 164, 361, 362, 375, 417, 437
BstSLI GKGCMC 1 cut(s) 117
BstUI CGCG 6 cut(s) 57, 205, 207, 214, 397, 453
BstV1I GCAGC 1 cut(s) 397
BstX2I RGATCY 1 cut(s) 338
BstYI RGATCY 1 cut(s) 338
BstZI CGGCCG 2 cut(s) 351, 435
BsuRI GGCC 6 cut(s) 31, 115, 298, 353, 417, 437
BtrI CACGTC 2 cut(s) 61, 162
CaiI CAGNNNCTG 1 cut(s) 81
CfoI GCGC 5 cut(s) 43, 207, 216, 399, 455
Cfr13I GGNCC 6 cut(s) 11, 29, 84, 113, 114, 415
Cfr9I CCCGGG 1 cut(s) 362
CseI GACGC 1 cut(s) 220
CviAII CATG 2 cut(s) 258, 277
DdeI CTNAG 2 cut(s) 99, 241
DpnI GATC 2 cut(s) 247, 340
DpnII GATC 2 cut(s) 245, 338
EaeI YGGCCR 2 cut(s) 351, 435
EagI CGGCCG 2 cut(s) 351, 435
Eam1104I CTCTTC 2 cut(s) 76, 297
EarI CTCTTC 2 cut(s) 76, 297
EciI GGCGGA 1 cut(s) 348
EclXI CGGCCG 2 cut(s) 351, 435
Eco24I GRGCYC 2 cut(s) 117, 369
Eco47I GGWCC 2 cut(s) 11, 84
Eco52I CGGCCG 2 cut(s) 351, 435
Eco88I CYCGRG 1 cut(s) 362
Eco91I GGTNACC 1 cut(s) 228
EcoO109I RGGNCCY 3 cut(s) 113, 114, 415
EcoO65I GGTNACC 1 cut(s) 228
EcoRII CCWGG 3 cut(s) 109, 375, 417
EcoT38I GRGCYC 2 cut(s) 117, 369
Esp3I CGTCTC 2 cut(s) 132, 203
FaeI CATG 2 cut(s) 261, 280
FaiI YATR 3 cut(s) 259, 278, 444
FaqI GGGAC 1 cut(s) 148
FatI CATG 2 cut(s) 257, 276
FauI CCCGC 1 cut(s) 126
Fnu4HI GCNGC 5 cut(s) 32, 79, 354, 386, 395
FriOI GRGCYC 2 cut(s) 117, 369
Fsp4HI GCNGC 5 cut(s) 32, 79, 354, 386, 395
GlaI GCGC 5 cut(s) 42, 206, 215, 398, 454
GluI GCNGC 5 cut(s) 32, 79, 354, 386, 395
HaeIII GGCC 6 cut(s) 31, 115, 298, 353, 417, 437
HapII CCGG 8 cut(s) 17, 35, 46, 95, 131, 166, 363, 438
HgaI GACGC 1 cut(s) 220
HhaI GCGC 5 cut(s) 43, 207, 216, 399, 455
Hin1I GRCGYC 1 cut(s) 125
Hin1II CATG 2 cut(s) 261, 280
Hin6I GCGC 5 cut(s) 41, 205, 214, 397, 453
HinP1I GCGC 5 cut(s) 41, 205, 214, 397, 453
HincII GTYRAC 1 cut(s) 153
HindII GTYRAC 1 cut(s) 153
HinfI GANTC 2 cut(s) 134, 187
HpaII CCGG 8 cut(s) 17, 35, 46, 95, 131, 166, 363, 438
Hpy166II GTNNAC 2 cut(s) 153, 274
Hpy188I TCNGA 1 cut(s) 222
Hpy188III TCNNGA 3 cut(s) 17, 131, 172
Hpy8I GTNNAC 2 cut(s) 153, 274
Hpy99I CGWCG 4 cut(s) 62, 127, 352, 436
HpyAV CCTTC 1 cut(s) 309
HpyCH4IV ACGT 4 cut(s) 60, 125, 143, 161
HpyCH4V TGCA 3 cut(s) 263, 344, 385
HpyF10VI GCNNNNNNNGC 8 cut(s) 40, 75, 211, 213, 350, 391, 394, 434
HpyF3I CTNAG 2 cut(s) 99, 241
HpySE526I ACGT 4 cut(s) 60, 125, 143, 161
Hsp92I GRCGYC 1 cut(s) 125
Hsp92II CATG 2 cut(s) 261, 280
HspAI GCGC 5 cut(s) 41, 205, 214, 397, 453
Kpn2I TCCGGA 2 cut(s) 16, 130
Kzo9I GATC 2 cut(s) 245, 338
LguI GCTCTTC 1 cut(s) 76
LmnI GCTCC 1 cut(s) 361
Lsp1109I GCAGC 1 cut(s) 397
MaeII ACGT 4 cut(s) 60, 125, 143, 161
MaeIII GTNAC 2 cut(s) 228, 447
MalI GATC 2 cut(s) 247, 340
MbiI CCGCTC 1 cut(s) 356
MboI GATC 2 cut(s) 245, 338
MboII GAAGA 2 cut(s) 63, 284
MflI RGATCY 1 cut(s) 338
MhlI GDGCHC 3 cut(s) 71, 117, 369
MluCI AATT 1 cut(s) 175
MlyI GAGTC 1 cut(s) 128
MnlI CCTC 4 cut(s) 24, 102, 300, 411
MroI TCCGGA 2 cut(s) 16, 130
MseI TTAA 2 cut(s) 180, 457
MspA1I CMGCKG 1 cut(s) 81
MspI CCGG 8 cut(s) 17, 35, 46, 95, 131, 166, 363, 438
MspR9I CCNGG 8 cut(s) 36, 111, 166, 363, 364, 377, 419, 439
MvaI CCWGG 3 cut(s) 111, 377, 419
MvnI CGCG 6 cut(s) 57, 205, 207, 214, 397, 453
MwoI GCNNNNNNNGC 8 cut(s) 40, 75, 211, 213, 350, 391, 394, 434
NciI CCSGG 5 cut(s) 36, 166, 363, 364, 439
NdeII GATC 2 cut(s) 245, 338
NlaIII CATG 2 cut(s) 261, 280
NlaIV GGNNCC 5 cut(s) 86, 115, 116, 282, 416
NmuCI GTSAC 1 cut(s) 447
NspV TTCGAA 1 cut(s) 196
PciSI GCTCTTC 1 cut(s) 76
PfeI GAWTC 1 cut(s) 187
PflMI CCANNNNNTGG 1 cut(s) 81
PkrI GCNGC 5 cut(s) 33, 80, 355, 387, 396
PleI GAGTC 1 cut(s) 128
PpsI GAGTC 1 cut(s) 128
Psp1406I AACGTT 1 cut(s) 143
Psp6I CCWGG 3 cut(s) 109, 375, 417
PspEI GGTNACC 1 cut(s) 228
PspGI CCWGG 3 cut(s) 109, 375, 417
PspN4I GGNNCC 5 cut(s) 86, 115, 116, 282, 416
PspOMI GGGCCC 1 cut(s) 113
PspPI GGNCC 6 cut(s) 11, 29, 84, 113, 114, 415
PstNI CAGNNNCTG 1 cut(s) 81
PsuI RGATCY 1 cut(s) 338
SapI GCTCTTC 1 cut(s) 76
SaqAI TTAA 2 cut(s) 180, 457
SatI GCNGC 5 cut(s) 32, 79, 354, 386, 395
Sau3AI GATC 2 cut(s) 245, 338
Sau96I GGNCC 6 cut(s) 11, 29, 84, 113, 114, 415
SchI GAGTC 1 cut(s) 128
ScrFI CCNGG 8 cut(s) 36, 111, 166, 363, 364, 377, 419, 439
SduI GDGCHC 3 cut(s) 71, 117, 369
SetI ASST 8 cut(s) 63, 94, 128, 146, 164, 286, 381, 449
SfuI TTCGAA 1 cut(s) 196
SinI GGWCC 2 cut(s) 11, 84
SmaI CCCGGG 1 cut(s) 364
SrfI GCCCGGGC 1 cut(s) 364
Sse9I AATT 1 cut(s) 175
SsiI CCGC 8 cut(s) 32, 64, 79, 119, 354, 359, 392, 395
SspI AATATT 1 cut(s) 320
StyD4I CCNGG 8 cut(s) 34, 109, 164, 361, 362, 375, 417, 437
TaiI ACGT 4 cut(s) 63, 128, 146, 164
TaqI TCGA 2 cut(s) 196, 248
TasI AATT 1 cut(s) 175
TauI GCSGC 4 cut(s) 34, 81, 356, 397
TfiI GAWTC 1 cut(s) 187
Tru1I TTAA 2 cut(s) 180, 457
Tru9I TTAA 2 cut(s) 180, 457
TseFI GTSAC 1 cut(s) 447
TseI GCWGC 1 cut(s) 385
Tsp45I GTSAC 1 cut(s) 447
TspMI CCCGGG 1 cut(s) 362
Van91I CCANNNNNTGG 1 cut(s) 81
VpaK11BI GGWCC 2 cut(s) 11, 84
XapI RAATTY 1 cut(s) 175
XmaI CCCGGG 1 cut(s) 362
ZraI GACGTC 1 cut(s) 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.