Rroxscaffold_71G00445630

mitotic sister chromatid biorientation

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000071
OG0000098
Physical Location & Seq
Forward (+)
33957 .. 35165
1209 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_71G00445630.1

Sequence Viewer

Length: 1008 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCCGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACCGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCCGAAGGCTCCCACTTATACTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCCGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGCGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCCGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

335

Amino Acids

35.67

Weight (kDa)

10.94

Isoelectric Point (pI)

58.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 947
AccBSI CCGCTC 1 cut(s) 668
AccI GTMKAC 2 cut(s) 550, 593
AccII CGCG 4 cut(s) 658, 677, 679, 923
AccIII TCCGGA 1 cut(s) 884
AclI AACGTT 1 cut(s) 389
AclWI GGATC 5 cut(s) 34, 136, 318, 768, 781
AcoI YGGCCR 2 cut(s) 648, 962
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 580, 856
AfiI CCNNNNNNNGG 8 cut(s) 345, 371, 646, 650, 657, 947, 960, 976
AgsI TTSAA 2 cut(s) 602, 894
AjiI CACGTC 1 cut(s) 927
AjnI CCWGG 1 cut(s) 975
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 480, 687
AluI AGCT 5 cut(s) 105, 186, 229, 480, 687
Alw21I GWGCWC 2 cut(s) 231, 937
Alw26I GTCTC 1 cut(s) 829
AlwI GGATC 5 cut(s) 34, 136, 318, 768, 781
AlwNI CAGNNNCTG 2 cut(s) 822, 947
Ama87I CYCGRG 3 cut(s) 607, 688, 762
Aor13HI TCCGGA 1 cut(s) 884
AoxI GGCC 4 cut(s) 136, 648, 897, 962
ApeKI GCWGC 3 cut(s) 58, 684, 747
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 2 cut(s) 679, 910
AspS9I GGNCC 5 cut(s) 336, 726, 879, 897, 950
AsuC2I CCSGG 5 cut(s) 308, 608, 609, 647, 904
AsuHPI GGTGA 2 cut(s) 690, 819
AvaI CYCGRG 3 cut(s) 607, 688, 762
AvaII GGWCC 4 cut(s) 336, 726, 879, 950
BaeGI GKGCMC 2 cut(s) 358, 738
BamHI GGATCC 1 cut(s) 773
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 483
Bbv12I GWGCWC 2 cut(s) 231, 937
BbvI GCAGC 3 cut(s) 45, 696, 759
BceAI ACGGC 1 cut(s) 954
BciT130I CCWGG 1 cut(s) 977
BcnI CCSGG 5 cut(s) 308, 608, 609, 647, 904
BcoDI GTCTC 1 cut(s) 829
BfaI CTAG 2 cut(s) 102, 470
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 905
BisI GCNGC 8 cut(s) 59, 269, 659, 675, 685, 748, 900, 945
BlsI GCNGC 8 cut(s) 60, 270, 660, 676, 686, 749, 901, 946
Bme1390I CCNGG 6 cut(s) 308, 608, 609, 647, 904, 977
Bme18I GGWCC 4 cut(s) 336, 726, 879, 950
BmeT110I CYCGRG 3 cut(s) 607, 688, 762
BmgBI CACGTC 1 cut(s) 927
BmgT120I GGNCC 5 cut(s) 336, 726, 879, 897, 950
BmiI GGNNCC 6 cut(s) 337, 426, 727, 728, 775, 952
BmrFI CCNGG 6 cut(s) 308, 608, 609, 647, 904, 977
BmrI ACTGGG 2 cut(s) 629, 732
BmsI GCATC 1 cut(s) 832
BmuI ACTGGG 2 cut(s) 629, 732
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 2 cut(s) 292, 483
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpuEI CTTGAG 1 cut(s) 431
BpuMI CCSGG 5 cut(s) 308, 608, 609, 647, 904
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 829
BsaJI CCNNGG 9 cut(s) 79, 525, 607, 608, 645, 763, 830, 903, 976
BsaWI WCCGGW 2 cut(s) 164, 884
BsaXI ACNNNNNCTCC 2 cut(s) 942, 972
Bsc4I CCNNNNNNNGG 8 cut(s) 345, 371, 646, 650, 657, 947, 960, 976
Bse118I RCCGGY 2 cut(s) 650, 860
Bse1I ACTGG 4 cut(s) 69, 582, 635, 727
BseAI TCCGGA 1 cut(s) 884
BseBI CCWGG 1 cut(s) 977
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 9 cut(s) 79, 525, 607, 608, 645, 763, 830, 903, 976
BseLI CCNNNNNNNGG 8 cut(s) 345, 371, 646, 650, 657, 947, 960, 976
BseMII CTCAG 1 cut(s) 579
BseNI ACTGG 4 cut(s) 69, 582, 635, 727
BseSI GKGCMC 2 cut(s) 358, 738
BseX3I CGGCCG 2 cut(s) 648, 962
BseXI GCAGC 3 cut(s) 45, 696, 759
BseYI CCCAGC 2 cut(s) 273, 737
Bsh1236I CGCG 4 cut(s) 658, 677, 679, 923
Bsh1285I CGRYCG 3 cut(s) 651, 861, 965
BshFI GGCC 4 cut(s) 138, 650, 899, 964
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 3 cut(s) 651, 861, 965
BsiHKAI GWGCWC 2 cut(s) 231, 937
BsiHKCI CYCGRG 3 cut(s) 607, 688, 762
BsiSI CCGG 9 cut(s) 165, 308, 608, 647, 651, 861, 885, 903, 961
BslFI GGGAC 4 cut(s) 570, 627, 733, 739
BslI CCNNNNNNNGG 8 cut(s) 345, 371, 646, 650, 657, 947, 960, 976
BsmAI GTCTC 1 cut(s) 829
BsmFI GGGAC 4 cut(s) 570, 627, 733, 739
BsnI GGCC 4 cut(s) 138, 650, 899, 964
Bso31I GGTCTC 1 cut(s) 829
BsoBI CYCGRG 3 cut(s) 607, 688, 762
Bsp1286I GDGCHC 4 cut(s) 231, 358, 738, 937
Bsp13I TCCGGA 1 cut(s) 884
Bsp143I GATC 4 cut(s) 26, 128, 310, 773
BspANI GGCC 4 cut(s) 138, 650, 899, 964
BspCNI CTCAG 1 cut(s) 580
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 884
BspFNI CGCG 4 cut(s) 658, 677, 679, 923
BspLI GGNNCC 6 cut(s) 337, 426, 727, 728, 775, 952
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 768, 781
BspQI GCTCTTC 2 cut(s) 4, 942
BspTNI GGTCTC 1 cut(s) 829
BsrBI CCGCTC 1 cut(s) 668
BsrFI RCCGGY 2 cut(s) 650, 860
BsrI ACTGG 4 cut(s) 69, 582, 635, 727
BssAI RCCGGY 2 cut(s) 650, 860
BssECI CCNNGG 9 cut(s) 79, 525, 607, 608, 645, 763, 830, 903, 976
BssMI GATC 4 cut(s) 26, 128, 310, 773
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 525, 830
Bst2BI CACGAG 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 977
Bst4CI ACNGT 2 cut(s) 151, 598
Bst6I CTCTTC 2 cut(s) 4, 942
BstC8I GCNNGC 5 cut(s) 318, 328, 652, 656, 987
BstDEI CTNAG 2 cut(s) 235, 588
BstDSI CCRYGG 1 cut(s) 79
BstFNI CGCG 4 cut(s) 658, 677, 679, 923
BstHHI GCGC 2 cut(s) 679, 910
BstKTI GATC 4 cut(s) 29, 131, 313, 776
BstMAI GTCTC 1 cut(s) 829
BstMBI GATC 4 cut(s) 26, 128, 310, 773
BstMCI CGRYCG 3 cut(s) 651, 861, 965
BstMWI GCNNNNNNNGC 9 cut(s) 50, 274, 509, 674, 690, 747, 870, 905, 941
BstNI CCWGG 1 cut(s) 977
BstPAI GACNNNNGTC 1 cut(s) 472
BstSCI CCNGG 6 cut(s) 306, 606, 607, 645, 902, 975
BstSLI GKGCMC 2 cut(s) 358, 738
BstUI CGCG 4 cut(s) 658, 677, 679, 923
BstV1I GCAGC 3 cut(s) 45, 696, 759
BstV2I GAAGAC 2 cut(s) 292, 483
BstX2I RGATCY 1 cut(s) 773
BstYI RGATCY 1 cut(s) 773
BstZI CGGCCG 2 cut(s) 648, 962
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 4 cut(s) 138, 650, 899, 964
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 79
BtrI CACGTC 1 cut(s) 927
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 1 cut(s) 358
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 5 cut(s) 318, 328, 652, 656, 987
CaiI CAGNNNCTG 2 cut(s) 822, 947
CfoI GCGC 2 cut(s) 679, 910
Cfr10I RCCGGY 2 cut(s) 650, 860
Cfr13I GGNCC 5 cut(s) 336, 726, 879, 897, 950
Cfr9I CCCGGG 1 cut(s) 607
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 579, 855
CviQI GTAC 3 cut(s) 162, 579, 855
DdeI CTNAG 2 cut(s) 235, 588
DpnI GATC 4 cut(s) 28, 130, 312, 775
DpnII GATC 4 cut(s) 26, 128, 310, 773
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 2 cut(s) 648, 962
EagI CGGCCG 2 cut(s) 648, 962
Eam1104I CTCTTC 2 cut(s) 4, 942
EarI CTCTTC 2 cut(s) 4, 942
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 2 cut(s) 648, 962
Eco130I CCWWGG 2 cut(s) 525, 830
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 829
Eco47I GGWCC 4 cut(s) 336, 726, 879, 950
Eco52I CGGCCG 2 cut(s) 648, 962
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 3 cut(s) 607, 688, 762
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 726
EcoRII CCWGG 1 cut(s) 975
EcoT14I CCWWGG 2 cut(s) 525, 830
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 525, 830
FaiI YATR 3 cut(s) 47, 435, 851
FaqI GGGAC 4 cut(s) 570, 627, 733, 739
FauI CCCGC 4 cut(s) 325, 366, 508, 673
FblI GTMKAC 2 cut(s) 550, 593
Fnu4HI GCNGC 8 cut(s) 59, 269, 659, 675, 685, 748, 900, 945
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 8 cut(s) 59, 269, 659, 675, 685, 748, 900, 945
FspBI CTAG 2 cut(s) 102, 470
GlaI GCGC 2 cut(s) 678, 909
GluI GCNGC 8 cut(s) 59, 269, 659, 675, 685, 748, 900, 945
GsaI CCCAGC 2 cut(s) 277, 741
HaeIII GGCC 4 cut(s) 138, 650, 899, 964
HapII CCGG 9 cut(s) 165, 308, 608, 647, 651, 861, 885, 903, 961
HhaI GCGC 2 cut(s) 679, 910
Hin6I GCGC 2 cut(s) 677, 908
HinP1I GCGC 2 cut(s) 677, 908
HincII GTYRAC 1 cut(s) 594
HindII GTYRAC 1 cut(s) 594
HinfI GANTC 6 cut(s) 175, 367, 473, 506, 565, 590
HpaII CCGG 9 cut(s) 165, 308, 608, 647, 651, 861, 885, 903, 961
HphI GGTGA 2 cut(s) 690, 819
Hpy166II GTNNAC 4 cut(s) 551, 594, 698, 827
Hpy188I TCNGA 6 cut(s) 94, 174, 366, 467, 564, 589
Hpy188III TCNNGA 3 cut(s) 718, 762, 885
Hpy8I GTNNAC 4 cut(s) 551, 594, 698, 827
Hpy99I CGWCG 3 cut(s) 44, 713, 928
HpyAV CCTTC 3 cut(s) 17, 415, 617
HpyCH4III ACNGT 2 cut(s) 151, 598
HpyCH4IV ACGT 3 cut(s) 39, 389, 926
HpyF10VI GCNNNNNNNGC 9 cut(s) 50, 274, 509, 674, 690, 747, 870, 905, 941
HpyF3I CTNAG 2 cut(s) 235, 588
HpySE526I ACGT 3 cut(s) 39, 389, 926
HspAI GCGC 2 cut(s) 677, 908
KflI GGGWCCC 1 cut(s) 726
Kpn2I TCCGGA 1 cut(s) 884
KroI GCCGGC 1 cut(s) 650
KroNI GCCGGC 1 cut(s) 652
Kzo9I GATC 4 cut(s) 26, 128, 310, 773
LguI GCTCTTC 2 cut(s) 4, 942
LmnI GCTCC 2 cut(s) 430, 626
Lsp1109I GCAGC 3 cut(s) 45, 696, 759
LweI GCATC 1 cut(s) 832
MaeI CTAG 2 cut(s) 102, 470
MaeII ACGT 3 cut(s) 39, 389, 926
MaeIII GTNAC 2 cut(s) 83, 767
MalI GATC 4 cut(s) 28, 130, 312, 775
MbiI CCGCTC 1 cut(s) 668
MboI GATC 4 cut(s) 26, 128, 310, 773
MboII GAAGA 4 cut(s) 21, 292, 483, 929
MflI RGATCY 1 cut(s) 773
MhlI GDGCHC 4 cut(s) 231, 358, 738, 937
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 482, 599
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 9 cut(s) 109, 339, 372, 453, 753, 758, 812, 892, 968
MroI TCCGGA 1 cut(s) 884
MroNI GCCGGC 1 cut(s) 650
MseI TTAA 4 cut(s) 108, 257, 392, 993
MspA1I CMGCKG 1 cut(s) 947
MspI CCGG 9 cut(s) 165, 308, 608, 647, 651, 861, 885, 903, 961
MspR9I CCNGG 6 cut(s) 308, 608, 609, 647, 904, 977
MvaI CCWGG 1 cut(s) 977
MvnI CGCG 4 cut(s) 658, 677, 679, 923
MwoI GCNNNNNNNGC 9 cut(s) 50, 274, 509, 674, 690, 747, 870, 905, 941
NaeI GCCGGC 1 cut(s) 652
NciI CCSGG 5 cut(s) 308, 608, 609, 647, 904
NdeII GATC 4 cut(s) 26, 128, 310, 773
NgoMIV GCCGGC 1 cut(s) 650
NlaIV GGNNCC 6 cut(s) 337, 426, 727, 728, 775, 952
NmeAIII GCCGAG 1 cut(s) 990
PaeR7I CTCGAG 1 cut(s) 688
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 942
PdiI GCCGGC 1 cut(s) 652
PfeI GAWTC 4 cut(s) 175, 367, 506, 565
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 947
PkrI GCNGC 8 cut(s) 60, 270, 660, 676, 686, 749, 901, 946
PleI GAGTC 2 cut(s) 481, 598
PpsI GAGTC 2 cut(s) 481, 598
PpuMI RGGWCCY 1 cut(s) 726
PshAI GACNNNNGTC 1 cut(s) 472
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 726
Psp6I CCWGG 1 cut(s) 975
PspFI CCCAGC 2 cut(s) 273, 737
PspGI CCWGG 1 cut(s) 975
PspN4I GGNNCC 6 cut(s) 337, 426, 727, 728, 775, 952
PspPI GGNCC 5 cut(s) 336, 726, 879, 897, 950
PspPPI RGGWCCY 1 cut(s) 726
PspXI VCTCGAGB 1 cut(s) 688
PstNI CAGNNNCTG 2 cut(s) 822, 947
PsuI RGATCY 1 cut(s) 773
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 580, 856
RsaNI GTAC 3 cut(s) 162, 579, 855
SacI GAGCTC 1 cut(s) 231
SalI GTCGAC 1 cut(s) 592
SapI GCTCTTC 2 cut(s) 4, 942
SaqAI TTAA 4 cut(s) 108, 257, 392, 993
SatI GCNGC 8 cut(s) 59, 269, 659, 675, 685, 748, 900, 945
Sau3AI GATC 4 cut(s) 26, 128, 310, 773
Sau96I GGNCC 5 cut(s) 336, 726, 879, 897, 950
SchI GAGTC 2 cut(s) 482, 599
ScrFI CCNGG 6 cut(s) 308, 608, 609, 647, 904, 977
SduI GDGCHC 4 cut(s) 231, 358, 738, 937
SfaNI GCATC 1 cut(s) 832
Sfr274I CTCGAG 1 cut(s) 688
SinI GGWCC 4 cut(s) 336, 726, 879, 950
SlaI CTCGAG 1 cut(s) 688
SmaI CCCGGG 1 cut(s) 609
SmlI CTYRAG 2 cut(s) 446, 688
SmoI CTYRAG 2 cut(s) 446, 688
Sse9I AATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 102, 470
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 606, 607, 645, 902, 975
StyI CCWWGG 2 cut(s) 525, 830
TaaI ACNGT 2 cut(s) 151, 598
TaiI ACGT 3 cut(s) 42, 392, 929
TaqI TCGA 4 cut(s) 21, 131, 593, 689
TaqII GACCGA 1 cut(s) 867
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 661, 677, 902, 947
TfiI GAWTC 4 cut(s) 175, 367, 506, 565
Tru1I TTAA 4 cut(s) 108, 257, 392, 993
Tru9I TTAA 4 cut(s) 108, 257, 392, 993
TscAI CASTG 1 cut(s) 358
TseI GCWGC 3 cut(s) 58, 684, 747
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 387, 566, 629, 786
TspMI CCCGGG 1 cut(s) 607
TspRI CASTG 1 cut(s) 358
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 947
VpaK11BI GGWCC 4 cut(s) 336, 726, 879, 950
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 688
XmaI CCCGGG 1 cut(s) 607
XmiI GTMKAC 2 cut(s) 550, 593
XspI CTAG 2 cut(s) 102, 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.