Rroxscaffold_90G00448770

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000090
OG0000098
Physical Location & Seq
Forward (+)
1509 .. 2679
1171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_90G00448770.1

Sequence Viewer

Length: 885 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGGCTTTGGGTCCAAAAAAGAGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACTGTTGAACGCCCGGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

294

Amino Acids

32.18

Weight (kDa)

10.33

Isoelectric Point (pI)

55.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
Acc36I ACCTGC 1 cut(s) 252
AccB7I CCANNNNNTGG 1 cut(s) 864
AccBSI CCGCTC 1 cut(s) 583
AccI GTMKAC 2 cut(s) 466, 509
AccII CGCG 3 cut(s) 573, 592, 840
AccIII TCCGGA 1 cut(s) 798
AclWI GGATC 5 cut(s) 34, 136, 318, 681, 694
AcoI YGGCCR 1 cut(s) 563
AcsI RAATTY 1 cut(s) 110
AfaI GTAC 3 cut(s) 163, 496, 769
AfiI CCNNNNNNNGG 4 cut(s) 371, 572, 864, 878
AgsI TTSAA 2 cut(s) 518, 808
AjiI CACGTC 1 cut(s) 844
AjuI GAANNNNNNNTTGG 2 cut(s) 315, 347
AluBI AGCT 5 cut(s) 105, 186, 229, 396, 601
AluI AGCT 5 cut(s) 105, 186, 229, 396, 601
Alw21I GWGCWC 2 cut(s) 231, 854
Alw26I GTCTC 1 cut(s) 742
AlwI GGATC 5 cut(s) 34, 136, 318, 681, 694
AlwNI CAGNNNCTG 2 cut(s) 735, 864
Ama87I CYCGRG 4 cut(s) 523, 602, 658, 675
Aor13HI TCCGGA 1 cut(s) 798
AoxI GGCC 3 cut(s) 136, 563, 811
ApeKI GCWGC 2 cut(s) 58, 598
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 825
AspS9I GGNCC 5 cut(s) 336, 640, 793, 811, 867
AsuC2I CCSGG 6 cut(s) 308, 524, 525, 562, 775, 818
AsuHPI GGTGA 2 cut(s) 604, 732
AvaI CYCGRG 4 cut(s) 523, 602, 658, 675
AvaII GGWCC 4 cut(s) 336, 640, 793, 867
BaeGI GKGCMC 2 cut(s) 358, 652
BamHI GGATCC 1 cut(s) 686
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 399
Bbv12I GWGCWC 2 cut(s) 231, 854
BbvI GCAGC 2 cut(s) 45, 610
BcnI CCSGG 6 cut(s) 308, 524, 525, 562, 775, 818
BcoDI GTCTC 1 cut(s) 742
BfaI CTAG 2 cut(s) 102, 386
BfuAI ACCTGC 1 cut(s) 252
BisI GCNGC 7 cut(s) 59, 269, 574, 590, 599, 814, 862
BlsI GCNGC 7 cut(s) 60, 270, 575, 591, 600, 815, 863
Bme1390I CCNGG 6 cut(s) 308, 524, 525, 562, 775, 818
Bme18I GGWCC 4 cut(s) 336, 640, 793, 867
BmeT110I CYCGRG 4 cut(s) 523, 602, 658, 675
BmgBI CACGTC 1 cut(s) 844
BmgT120I GGNCC 5 cut(s) 336, 640, 793, 811, 867
BmiI GGNNCC 5 cut(s) 337, 641, 642, 688, 869
BmrFI CCNGG 6 cut(s) 308, 524, 525, 562, 775, 818
BmrI ACTGGG 2 cut(s) 545, 646
BmsI GCATC 1 cut(s) 745
BmuI ACTGGG 2 cut(s) 545, 646
BoxI GACNNNNGTC 1 cut(s) 388
BpiI GAAGAC 2 cut(s) 292, 399
BplI GAGNNNNNCTC 2 cut(s) 380, 412
BpuMI CCSGG 6 cut(s) 308, 524, 525, 562, 775, 818
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 742
BsaJI CCNNGG 8 cut(s) 441, 523, 524, 560, 590, 676, 743, 817
BsaWI WCCGGW 2 cut(s) 798, 827
Bsc4I CCNNNNNNNGG 4 cut(s) 371, 572, 864, 878
Bse118I RCCGGY 1 cut(s) 565
Bse1I ACTGG 5 cut(s) 69, 169, 498, 551, 641
BseAI TCCGGA 1 cut(s) 798
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 8 cut(s) 441, 523, 524, 560, 590, 676, 743, 817
BseLI CCNNNNNNNGG 4 cut(s) 371, 572, 864, 878
BseMII CTCAG 1 cut(s) 495
BseNI ACTGG 5 cut(s) 69, 169, 498, 551, 641
BseSI GKGCMC 2 cut(s) 358, 652
BseX3I CGGCCG 1 cut(s) 563
BseXI GCAGC 2 cut(s) 45, 610
BseYI CCCAGC 2 cut(s) 273, 651
Bsh1236I CGCG 3 cut(s) 573, 592, 840
Bsh1285I CGRYCG 2 cut(s) 566, 774
BshFI GGCC 3 cut(s) 138, 565, 813
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 566, 774
BsiHKAI GWGCWC 2 cut(s) 231, 854
BsiHKCI CYCGRG 4 cut(s) 523, 602, 658, 675
BsiSI CCGG 9 cut(s) 308, 524, 562, 566, 774, 799, 817, 828, 879
BslFI GGGAC 4 cut(s) 486, 543, 647, 653
BslI CCNNNNNNNGG 4 cut(s) 371, 572, 864, 878
BsmAI GTCTC 1 cut(s) 742
BsmFI GGGAC 4 cut(s) 486, 543, 647, 653
BsnI GGCC 3 cut(s) 138, 565, 813
Bso31I GGTCTC 1 cut(s) 742
BsoBI CYCGRG 4 cut(s) 523, 602, 658, 675
Bsp1286I GDGCHC 4 cut(s) 231, 358, 652, 854
Bsp13I TCCGGA 1 cut(s) 798
Bsp143I GATC 4 cut(s) 26, 128, 310, 686
BspANI GGCC 3 cut(s) 138, 565, 813
BspCNI CTCAG 1 cut(s) 496
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 798
BspFNI CGCG 3 cut(s) 573, 592, 840
BspLI GGNNCC 5 cut(s) 337, 641, 642, 688, 869
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 5 cut(s) 34, 136, 318, 681, 694
BspQI GCTCTTC 2 cut(s) 4, 859
BspTNI GGTCTC 1 cut(s) 742
BsrBI CCGCTC 1 cut(s) 583
BsrFI RCCGGY 1 cut(s) 565
BsrI ACTGG 5 cut(s) 69, 169, 498, 551, 641
BssAI RCCGGY 1 cut(s) 565
BssECI CCNNGG 8 cut(s) 441, 523, 524, 560, 590, 676, 743, 817
BssMI GATC 4 cut(s) 26, 128, 310, 686
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 441, 743
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 2 cut(s) 151, 514
Bst6I CTCTTC 2 cut(s) 4, 859
BstC8I GCNNGC 4 cut(s) 318, 328, 567, 571
BstDEI CTNAG 2 cut(s) 235, 504
BstDSI CCRYGG 1 cut(s) 590
BstFNI CGCG 3 cut(s) 573, 592, 840
BstHHI GCGC 1 cut(s) 825
BstKTI GATC 4 cut(s) 29, 131, 313, 689
BstMAI GTCTC 1 cut(s) 742
BstMBI GATC 4 cut(s) 26, 128, 310, 686
BstMCI CGRYCG 2 cut(s) 566, 774
BstPAI GACNNNNGTC 1 cut(s) 388
BstSCI CCNGG 6 cut(s) 306, 522, 523, 560, 773, 816
BstSLI GKGCMC 2 cut(s) 358, 652
BstUI CGCG 3 cut(s) 573, 592, 840
BstV1I GCAGC 2 cut(s) 45, 610
BstV2I GAAGAC 2 cut(s) 292, 399
BstX2I RGATCY 1 cut(s) 686
BstYI RGATCY 1 cut(s) 686
BstZI CGGCCG 1 cut(s) 563
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 565, 813
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 590
BtrI CACGTC 1 cut(s) 844
BtsI GCAGTG 1 cut(s) 358
BtsIMutI CAGTG 1 cut(s) 358
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 4 cut(s) 318, 328, 567, 571
CaiI CAGNNNCTG 2 cut(s) 735, 864
CfoI GCGC 1 cut(s) 825
Cfr10I RCCGGY 1 cut(s) 565
Cfr13I GGNCC 5 cut(s) 336, 640, 793, 811, 867
Cfr42I CCGCGG 1 cut(s) 593
Cfr9I CCCGGG 1 cut(s) 523
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 162, 495, 768
CviQI GTAC 3 cut(s) 162, 495, 768
DdeI CTNAG 2 cut(s) 235, 504
DpnI GATC 4 cut(s) 28, 130, 312, 688
DpnII GATC 4 cut(s) 26, 128, 310, 686
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 1 cut(s) 563
EagI CGGCCG 1 cut(s) 563
Eam1104I CTCTTC 2 cut(s) 4, 859
EarI CTCTTC 2 cut(s) 4, 859
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 563
Eco130I CCWWGG 2 cut(s) 441, 743
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 742
Eco47I GGWCC 4 cut(s) 336, 640, 793, 867
Eco52I CGGCCG 1 cut(s) 563
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 523, 602, 658, 675
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 640
EcoT14I CCWWGG 2 cut(s) 441, 743
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 441, 743
FaiI YATR 2 cut(s) 47, 764
FaqI GGGAC 4 cut(s) 486, 543, 647, 653
FauI CCCGC 4 cut(s) 325, 366, 424, 588
FblI GTMKAC 2 cut(s) 466, 509
Fnu4HI GCNGC 7 cut(s) 59, 269, 574, 590, 599, 814, 862
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 7 cut(s) 59, 269, 574, 590, 599, 814, 862
FspBI CTAG 2 cut(s) 102, 386
GlaI GCGC 1 cut(s) 824
GluI GCNGC 7 cut(s) 59, 269, 574, 590, 599, 814, 862
GsaI CCCAGC 2 cut(s) 277, 655
HaeIII GGCC 3 cut(s) 138, 565, 813
HapII CCGG 9 cut(s) 308, 524, 562, 566, 774, 799, 817, 828, 879
HhaI GCGC 1 cut(s) 825
Hin6I GCGC 1 cut(s) 823
HinP1I GCGC 1 cut(s) 823
HincII GTYRAC 1 cut(s) 510
HindII GTYRAC 1 cut(s) 510
HinfI GANTC 6 cut(s) 175, 367, 389, 422, 481, 506
HpaII CCGG 9 cut(s) 308, 524, 562, 566, 774, 799, 817, 828, 879
HphI GGTGA 2 cut(s) 604, 732
Hpy166II GTNNAC 4 cut(s) 467, 510, 612, 740
Hpy188I TCNGA 6 cut(s) 94, 174, 366, 383, 480, 505
Hpy188III TCNNGA 3 cut(s) 632, 675, 799
Hpy8I GTNNAC 4 cut(s) 467, 510, 612, 740
Hpy99I CGWCG 3 cut(s) 44, 627, 845
HpyAV CCTTC 2 cut(s) 17, 533
HpyCH4III ACNGT 2 cut(s) 151, 514
HpyCH4IV ACGT 2 cut(s) 39, 843
HpyF3I CTNAG 2 cut(s) 235, 504
HpySE526I ACGT 2 cut(s) 39, 843
HspAI GCGC 1 cut(s) 823
KflI GGGWCCC 1 cut(s) 640
Kpn2I TCCGGA 1 cut(s) 798
KroI GCCGGC 1 cut(s) 565
KroNI GCCGGC 1 cut(s) 567
KspI CCGCGG 1 cut(s) 593
Kzo9I GATC 4 cut(s) 26, 128, 310, 686
LguI GCTCTTC 2 cut(s) 4, 859
LmnI GCTCC 1 cut(s) 542
Lsp1109I GCAGC 2 cut(s) 45, 610
LweI GCATC 1 cut(s) 745
MaeI CTAG 2 cut(s) 102, 386
MaeII ACGT 2 cut(s) 39, 843
MaeIII GTNAC 2 cut(s) 83, 680
MalI GATC 4 cut(s) 28, 130, 312, 688
MbiI CCGCTC 1 cut(s) 583
MboI GATC 4 cut(s) 26, 128, 310, 686
MboII GAAGA 4 cut(s) 21, 292, 399, 846
MflI RGATCY 1 cut(s) 686
MhlI GDGCHC 4 cut(s) 231, 358, 652, 854
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 398, 515
MnlI CCTC 7 cut(s) 109, 340, 372, 667, 671, 725, 806
MroI TCCGGA 1 cut(s) 798
MroNI GCCGGC 1 cut(s) 565
MseI TTAA 2 cut(s) 108, 257
MspA1I CMGCKG 3 cut(s) 419, 592, 864
MspI CCGG 9 cut(s) 308, 524, 562, 566, 774, 799, 817, 828, 879
MspR9I CCNGG 6 cut(s) 308, 524, 525, 562, 775, 818
MvnI CGCG 3 cut(s) 573, 592, 840
NaeI GCCGGC 1 cut(s) 567
NciI CCSGG 6 cut(s) 308, 524, 525, 562, 775, 818
NdeII GATC 4 cut(s) 26, 128, 310, 686
NgoMIV GCCGGC 1 cut(s) 565
NlaIV GGNNCC 5 cut(s) 337, 641, 642, 688, 869
PaeR7I CTCGAG 2 cut(s) 602, 658
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 859
PdiI GCCGGC 1 cut(s) 567
PfeI GAWTC 4 cut(s) 175, 367, 422, 481
PflFI GACNNNGTC 1 cut(s) 296
PflMI CCANNNNNTGG 1 cut(s) 864
PkrI GCNGC 7 cut(s) 60, 270, 575, 591, 600, 815, 863
PleI GAGTC 2 cut(s) 397, 514
PpsI GAGTC 2 cut(s) 397, 514
PpuMI RGGWCCY 1 cut(s) 640
PshAI GACNNNNGTC 1 cut(s) 388
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 640
PspFI CCCAGC 2 cut(s) 273, 651
PspN4I GGNNCC 5 cut(s) 337, 641, 642, 688, 869
PspPI GGNCC 5 cut(s) 336, 640, 793, 811, 867
PspPPI RGGWCCY 1 cut(s) 640
PspXI VCTCGAGB 2 cut(s) 602, 658
PstNI CAGNNNCTG 2 cut(s) 735, 864
PsuI RGATCY 1 cut(s) 686
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 496, 769
RsaNI GTAC 3 cut(s) 162, 495, 768
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 593
SalI GTCGAC 1 cut(s) 508
SapI GCTCTTC 2 cut(s) 4, 859
SaqAI TTAA 2 cut(s) 108, 257
SatI GCNGC 7 cut(s) 59, 269, 574, 590, 599, 814, 862
Sau3AI GATC 4 cut(s) 26, 128, 310, 686
Sau96I GGNCC 5 cut(s) 336, 640, 793, 811, 867
SchI GAGTC 2 cut(s) 398, 515
ScrFI CCNGG 6 cut(s) 308, 524, 525, 562, 775, 818
SduI GDGCHC 4 cut(s) 231, 358, 652, 854
SfaNI GCATC 1 cut(s) 745
Sfr274I CTCGAG 2 cut(s) 602, 658
Sfr303I CCGCGG 1 cut(s) 593
SgrBI CCGCGG 1 cut(s) 593
SinI GGWCC 4 cut(s) 336, 640, 793, 867
SlaI CTCGAG 2 cut(s) 602, 658
SmaI CCCGGG 1 cut(s) 525
SmlI CTYRAG 2 cut(s) 602, 658
SmoI CTYRAG 2 cut(s) 602, 658
Sse9I AATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 102, 386
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 522, 523, 560, 773, 816
StyI CCWWGG 2 cut(s) 441, 743
TaaI ACNGT 2 cut(s) 151, 514
TaiI ACGT 2 cut(s) 42, 846
TaqI TCGA 5 cut(s) 21, 131, 509, 603, 659
TaqII GACCGA 1 cut(s) 781
TasI AATT 1 cut(s) 110
TauI GCSGC 5 cut(s) 271, 576, 592, 816, 864
TfiI GAWTC 4 cut(s) 175, 367, 422, 481
Tru1I TTAA 2 cut(s) 108, 257
Tru9I TTAA 2 cut(s) 108, 257
TscAI CASTG 1 cut(s) 358
TseI GCWGC 2 cut(s) 58, 598
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 387, 482, 545, 699
TspMI CCCGGG 1 cut(s) 523
TspRI CASTG 1 cut(s) 358
Tth111I GACNNNGTC 1 cut(s) 296
Van91I CCANNNNNTGG 1 cut(s) 864
VpaK11BI GGWCC 4 cut(s) 336, 640, 793, 867
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 602, 658
XmaI CCCGGG 1 cut(s) 523
XmiI GTMKAC 2 cut(s) 466, 509
XspI CTAG 2 cut(s) 102, 386
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.