Rroxscaffold_145G00452240

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000145
OG0000098
Physical Location & Seq
Forward (+)
226 .. 966
741 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_145G00452240.1

Sequence Viewer

Length: 612 bp
ATGACGAGGCATTTGGCTACCTTAAGAGATCGGATTCCCCTTGTCCGTACCAGCCCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGGAGCGTTCCCAGTCCGTCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGACCGGGACCCCCGTGCCCAGCCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCTTGCCTACATTGTTCCATTGACCGCAGGTCGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGACACCACGCGACGTGCGGTGCTCTTCCGCCGCCGGACCCTACCTCCGCCGAGCCGTTTCTGTGGTGGGCAGGCTGTTAAACGTAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCGGAATTTTAACCCGATTCCTTTTCGGTTCGCGCGAGACGCGCTATCGACGGGTTACCCGCCTCTTAGGATCGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

203

Amino Acids

23.28

Weight (kDa)

11.69

Isoelectric Point (pI)

66.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 493
Acc36I ACCTGC 1 cut(s) 270
AccBSI CCGCTC 1 cut(s) 132
AccI GTMKAC 1 cut(s) 61
AccII CGCG 6 cut(s) 122, 141, 384, 566, 568, 575
AccIII TCCGGA 1 cut(s) 345
AclI AACGTT 1 cut(s) 507
AclWI GGATC 3 cut(s) 230, 243, 611
AcoI YGGCCR 1 cut(s) 112
AcsI RAATTY 1 cut(s) 538
AcyI GRCGYC 1 cut(s) 490
AfaI GTAC 2 cut(s) 49, 317
AfiI CCNNNNNNNGG 4 cut(s) 91, 114, 121, 529
AflII CTTAAG 1 cut(s) 22
AgsI TTSAA 2 cut(s) 70, 355
AhdI GACNNNNNGTC 1 cut(s) 280
AjiI CACGTC 2 cut(s) 388, 526
AluBI AGCT 1 cut(s) 149
AluI AGCT 1 cut(s) 149
Alw21I GWGCWC 1 cut(s) 398
Alw26I GTCTC 3 cut(s) 290, 497, 564
AlwI GGATC 3 cut(s) 230, 243, 611
Ama87I CYCGRG 5 cut(s) 55, 75, 150, 224, 474
Aor13HI TCCGGA 1 cut(s) 345
AoxI GGCC 3 cut(s) 112, 358, 478
ApeKI GCWGC 2 cut(s) 146, 209
ApoI RAATTY 1 cut(s) 538
ArsI GACNNNNNNTTYG 1 cut(s) 27
AspLEI GCGC 3 cut(s) 371, 568, 577
AspS9I GGNCC 6 cut(s) 181, 187, 340, 358, 410, 479
AsuC2I CCSGG 5 cut(s) 76, 77, 185, 365, 530
AsuHPI GGTGA 2 cut(s) 152, 280
AvaI CYCGRG 5 cut(s) 55, 75, 150, 224, 474
AvaII GGWCC 4 cut(s) 181, 187, 340, 410
BaeGI GKGCMC 1 cut(s) 199
BamHI GGATCC 1 cut(s) 235
Bbv12I GWGCWC 1 cut(s) 398
BbvI GCAGC 2 cut(s) 158, 221
BceAI ACGGC 2 cut(s) 413, 497
BcgI CGANNNNNNTGC 2 cut(s) 237, 271
BcnI CCSGG 5 cut(s) 76, 77, 185, 365, 530
BcoDI GTCTC 3 cut(s) 290, 497, 564
BfrI CTTAAG 1 cut(s) 22
BfuAI ACCTGC 1 cut(s) 270
BglI GCCNNNNNGGC 1 cut(s) 366
BisI GCNGC 6 cut(s) 123, 139, 147, 210, 361, 405
BlsI GCNGC 6 cut(s) 124, 140, 148, 211, 362, 406
Bme1390I CCNGG 5 cut(s) 76, 77, 185, 365, 530
Bme18I GGWCC 4 cut(s) 181, 187, 340, 410
BmeRI GACNNNNNGTC 1 cut(s) 280
BmeT110I CYCGRG 5 cut(s) 55, 75, 150, 224, 474
BmgBI CACGTC 2 cut(s) 388, 526
BmgT120I GGNCC 6 cut(s) 181, 187, 340, 358, 410, 479
BmiI GGNNCC 5 cut(s) 188, 189, 237, 412, 481
BmrFI CCNGG 5 cut(s) 76, 77, 185, 365, 530
BmrI ACTGGG 1 cut(s) 97
BmsI GCATC 1 cut(s) 293
BmuI ACTGGG 1 cut(s) 97
BpuMI CCSGG 5 cut(s) 76, 77, 185, 365, 530
BsaHI GRCGYC 1 cut(s) 490
BsaI GGTCTC 1 cut(s) 290
BsaJI CCNNGG 5 cut(s) 75, 225, 291, 364, 475
BsaWI WCCGGW 1 cut(s) 345
BsaXI ACNNNNNCTCC 2 cut(s) 402, 432
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 114, 121, 529
Bse118I RCCGGY 2 cut(s) 114, 321
Bse1I ACTGG 1 cut(s) 103
BseAI TCCGGA 1 cut(s) 345
BseDI CCNNGG 5 cut(s) 75, 225, 291, 364, 475
BseLI CCNNNNNNNGG 4 cut(s) 91, 114, 121, 529
BseNI ACTGG 1 cut(s) 103
BseSI GKGCMC 1 cut(s) 199
BseX3I CGGCCG 1 cut(s) 112
BseXI GCAGC 2 cut(s) 158, 221
BseYI CCCAGC 1 cut(s) 198
Bsh1236I CGCG 6 cut(s) 122, 141, 384, 566, 568, 575
Bsh1285I CGRYCG 3 cut(s) 65, 115, 322
BshFI GGCC 3 cut(s) 114, 360, 480
BsiEI CGRYCG 3 cut(s) 65, 115, 322
BsiHKAI GWGCWC 1 cut(s) 398
BsiHKCI CYCGRG 5 cut(s) 55, 75, 150, 224, 474
BsiSI CCGG 8 cut(s) 76, 115, 184, 322, 346, 364, 408, 530
BslFI GGGAC 2 cut(s) 200, 512
BslI CCNNNNNNNGG 4 cut(s) 91, 114, 121, 529
BsmAI GTCTC 3 cut(s) 290, 497, 564
BsmBI CGTCTC 2 cut(s) 497, 564
BsmFI GGGAC 2 cut(s) 200, 512
BsnI GGCC 3 cut(s) 114, 360, 480
Bso31I GGTCTC 1 cut(s) 290
BsoBI CYCGRG 5 cut(s) 55, 75, 150, 224, 474
Bsp1286I GDGCHC 2 cut(s) 199, 398
Bsp13I TCCGGA 1 cut(s) 345
Bsp143I GATC 3 cut(s) 28, 235, 603
BspANI GGCC 3 cut(s) 114, 360, 480
BspEI TCCGGA 1 cut(s) 345
BspFNI CGCG 6 cut(s) 122, 141, 384, 566, 568, 575
BspLI GGNNCC 5 cut(s) 188, 189, 237, 412, 481
BspMI ACCTGC 1 cut(s) 270
BspPI GGATC 3 cut(s) 230, 243, 611
BspQI GCTCTTC 1 cut(s) 403
BspTI CTTAAG 1 cut(s) 22
BspTNI GGTCTC 1 cut(s) 290
BsrBI CCGCTC 1 cut(s) 132
BsrFI RCCGGY 2 cut(s) 114, 321
BsrI ACTGG 1 cut(s) 103
BssAI RCCGGY 2 cut(s) 114, 321
BssECI CCNNGG 5 cut(s) 75, 225, 291, 364, 475
BssMI GATC 3 cut(s) 28, 235, 603
BssNI GRCGYC 1 cut(s) 490
BssT1I CCWWGG 1 cut(s) 291
Bst4CI ACNGT 1 cut(s) 66
Bst6I CTCTTC 2 cut(s) 403, 475
BstACI GRCGYC 1 cut(s) 490
BstAFI CTTAAG 1 cut(s) 22
BstC8I GCNNGC 3 cut(s) 116, 120, 446
BstDEI CTNAG 1 cut(s) 599
BstEII GGTNACC 1 cut(s) 587
BstFNI CGCG 6 cut(s) 122, 141, 384, 566, 568, 575
BstHHI GCGC 3 cut(s) 371, 568, 577
BstKTI GATC 3 cut(s) 31, 238, 606
BstMAI GTCTC 3 cut(s) 290, 497, 564
BstMBI GATC 3 cut(s) 28, 235, 603
BstMCI CGRYCG 3 cut(s) 65, 115, 322
BstMWI GCNNNNNNNGC 6 cut(s) 138, 152, 331, 366, 572, 574
BstPI GGTNACC 1 cut(s) 587
BstSCI CCNGG 5 cut(s) 74, 75, 183, 363, 528
BstSLI GKGCMC 1 cut(s) 199
BstUI CGCG 6 cut(s) 122, 141, 384, 566, 568, 575
BstV1I GCAGC 2 cut(s) 158, 221
BstX2I RGATCY 1 cut(s) 235
BstYI RGATCY 1 cut(s) 235
BstZI CGGCCG 1 cut(s) 112
BsuRI GGCC 3 cut(s) 114, 360, 480
BtrI CACGTC 2 cut(s) 388, 526
BveI ACCTGC 1 cut(s) 270
Cac8I GCNNGC 3 cut(s) 116, 120, 446
CfoI GCGC 3 cut(s) 371, 568, 577
Cfr10I RCCGGY 2 cut(s) 114, 321
Cfr13I GGNCC 6 cut(s) 181, 187, 340, 358, 410, 479
Cfr9I CCCGGG 1 cut(s) 75
CpoI CGGWCCG 1 cut(s) 181
CseI GACGC 1 cut(s) 581
Csp6I GTAC 2 cut(s) 48, 316
CspI CGGWCCG 1 cut(s) 181
CviQI GTAC 2 cut(s) 48, 316
DdeI CTNAG 1 cut(s) 599
DpnI GATC 3 cut(s) 30, 237, 605
DpnII GATC 3 cut(s) 28, 235, 603
DriI GACNNNNNGTC 1 cut(s) 280
EaeI YGGCCR 1 cut(s) 112
EagI CGGCCG 1 cut(s) 112
Eam1104I CTCTTC 2 cut(s) 403, 475
Eam1105I GACNNNNNGTC 1 cut(s) 280
EarI CTCTTC 2 cut(s) 403, 475
EciI GGCGGA 2 cut(s) 391, 410
EclXI CGGCCG 1 cut(s) 112
Eco130I CCWWGG 1 cut(s) 291
Eco31I GGTCTC 1 cut(s) 290
Eco47I GGWCC 4 cut(s) 181, 187, 340, 410
Eco52I CGGCCG 1 cut(s) 112
Eco88I CYCGRG 5 cut(s) 55, 75, 150, 224, 474
Eco91I GGTNACC 1 cut(s) 587
EcoO109I RGGNCCY 2 cut(s) 187, 479
EcoO65I GGTNACC 1 cut(s) 587
EcoT14I CCWWGG 1 cut(s) 291
ErhI CCWWGG 1 cut(s) 291
Esp3I CGTCTC 2 cut(s) 497, 564
FaiI YATR 1 cut(s) 312
FaqI GGGAC 2 cut(s) 200, 512
FauI CCCGC 3 cut(s) 137, 491, 600
FblI GTMKAC 1 cut(s) 61
Fnu4HI GCNGC 6 cut(s) 123, 139, 147, 210, 361, 405
Fsp4HI GCNGC 6 cut(s) 123, 139, 147, 210, 361, 405
GlaI GCGC 3 cut(s) 370, 567, 576
GluI GCNGC 6 cut(s) 123, 139, 147, 210, 361, 405
GsaI CCCAGC 1 cut(s) 202
HaeIII GGCC 3 cut(s) 114, 360, 480
HapII CCGG 8 cut(s) 76, 115, 184, 322, 346, 364, 408, 530
HgaI GACGC 1 cut(s) 581
HhaI GCGC 3 cut(s) 371, 568, 577
Hin1I GRCGYC 1 cut(s) 490
Hin6I GCGC 3 cut(s) 369, 566, 575
HinP1I GCGC 3 cut(s) 369, 566, 575
HincII GTYRAC 2 cut(s) 62, 517
HindII GTYRAC 2 cut(s) 62, 517
HinfI GANTC 4 cut(s) 34, 58, 498, 550
HpaII CCGG 8 cut(s) 76, 115, 184, 322, 346, 364, 408, 530
HphI GGTGA 2 cut(s) 152, 280
Hpy166II GTNNAC 4 cut(s) 62, 160, 288, 517
Hpy188I TCNGA 4 cut(s) 33, 181, 497, 537
Hpy188III TCNNGA 3 cut(s) 224, 346, 474
Hpy8I GTNNAC 4 cut(s) 62, 160, 288, 517
Hpy99I CGWCG 5 cut(s) 113, 175, 389, 492, 586
HpyAV CCTTC 1 cut(s) 84
HpyCH4III ACNGT 1 cut(s) 66
HpyCH4IV ACGT 5 cut(s) 387, 456, 490, 507, 525
HpyF10VI GCNNNNNNNGC 6 cut(s) 138, 152, 331, 366, 572, 574
HpyF3I CTNAG 1 cut(s) 599
HpySE526I ACGT 5 cut(s) 387, 456, 490, 507, 525
Hsp92I GRCGYC 1 cut(s) 490
HspAI GCGC 3 cut(s) 369, 566, 575
KflI GGGWCCC 1 cut(s) 187
Kpn2I TCCGGA 1 cut(s) 345
KroI GCCGGC 1 cut(s) 114
KroNI GCCGGC 1 cut(s) 116
Kzo9I GATC 3 cut(s) 28, 235, 603
LguI GCTCTTC 1 cut(s) 403
LmnI GCTCC 1 cut(s) 94
Lsp1109I GCAGC 2 cut(s) 158, 221
LweI GCATC 1 cut(s) 293
MaeII ACGT 5 cut(s) 387, 456, 490, 507, 525
MaeIII GTNAC 2 cut(s) 229, 587
MalI GATC 3 cut(s) 30, 237, 605
MbiI CCGCTC 1 cut(s) 132
MboI GATC 3 cut(s) 28, 235, 603
MboII GAAGA 2 cut(s) 390, 462
MflI RGATCY 1 cut(s) 235
MhlI GDGCHC 2 cut(s) 199, 398
MluCI AATT 1 cut(s) 538
MlyI GAGTC 2 cut(s) 67, 492
MmeI TCCRAC 1 cut(s) 520
MnlI CCTC 6 cut(s) 215, 220, 353, 428, 470, 606
MroI TCCGGA 1 cut(s) 345
MroNI GCCGGC 1 cut(s) 114
MseI TTAA 3 cut(s) 23, 452, 543
MspCI CTTAAG 1 cut(s) 22
MspI CCGG 8 cut(s) 76, 115, 184, 322, 346, 364, 408, 530
MspR9I CCNGG 5 cut(s) 76, 77, 185, 365, 530
MvnI CGCG 6 cut(s) 122, 141, 384, 566, 568, 575
MwoI GCNNNNNNNGC 6 cut(s) 138, 152, 331, 366, 572, 574
NaeI GCCGGC 1 cut(s) 116
NciI CCSGG 5 cut(s) 76, 77, 185, 365, 530
NdeII GATC 3 cut(s) 28, 235, 603
NgoMIV GCCGGC 1 cut(s) 114
NlaIV GGNNCC 5 cut(s) 188, 189, 237, 412, 481
NmeAIII GCCGAG 1 cut(s) 449
PaeR7I CTCGAG 1 cut(s) 150
PciSI GCTCTTC 1 cut(s) 403
PcsI WCGNNNNNNNCGW 1 cut(s) 565
PdiI GCCGGC 1 cut(s) 116
PfeI GAWTC 2 cut(s) 34, 550
PkrI GCNGC 6 cut(s) 124, 140, 148, 211, 362, 406
PleI GAGTC 2 cut(s) 66, 492
PpsI GAGTC 2 cut(s) 66, 492
PpuMI RGGWCCY 1 cut(s) 187
Psp1406I AACGTT 1 cut(s) 507
Psp5II RGGWCCY 1 cut(s) 187
PspEI GGTNACC 1 cut(s) 587
PspFI CCCAGC 1 cut(s) 198
PspN4I GGNNCC 5 cut(s) 188, 189, 237, 412, 481
PspPI GGNCC 6 cut(s) 181, 187, 340, 358, 410, 479
PspPPI RGGWCCY 1 cut(s) 187
PspXI VCTCGAGB 1 cut(s) 150
PsuI RGATCY 1 cut(s) 235
RsaI GTAC 2 cut(s) 49, 317
RsaNI GTAC 2 cut(s) 48, 316
Rsr2I CGGWCCG 1 cut(s) 181
RsrII CGGWCCG 1 cut(s) 181
SalI GTCGAC 1 cut(s) 60
SapI GCTCTTC 1 cut(s) 403
SaqAI TTAA 3 cut(s) 23, 452, 543
SatI GCNGC 6 cut(s) 123, 139, 147, 210, 361, 405
Sau3AI GATC 3 cut(s) 28, 235, 603
Sau96I GGNCC 6 cut(s) 181, 187, 340, 358, 410, 479
SchI GAGTC 2 cut(s) 67, 492
ScrFI CCNGG 5 cut(s) 76, 77, 185, 365, 530
SduI GDGCHC 2 cut(s) 199, 398
SfaNI GCATC 1 cut(s) 293
Sfr274I CTCGAG 1 cut(s) 150
SinI GGWCC 4 cut(s) 181, 187, 340, 410
SlaI CTCGAG 1 cut(s) 150
SmaI CCCGGG 1 cut(s) 77
SmlI CTYRAG 2 cut(s) 22, 150
SmoI CTYRAG 2 cut(s) 22, 150
Sse9I AATT 1 cut(s) 538
StyD4I CCNGG 5 cut(s) 74, 75, 183, 363, 528
StyI CCWWGG 1 cut(s) 291
TaaI ACNGT 1 cut(s) 66
TaiI ACGT 5 cut(s) 390, 459, 493, 510, 528
TaqI TCGA 4 cut(s) 61, 151, 581, 606
TaqII GACCGA 1 cut(s) 328
TasI AATT 1 cut(s) 538
TauI GCSGC 4 cut(s) 125, 141, 363, 407
TfiI GAWTC 2 cut(s) 34, 550
Tru1I TTAA 3 cut(s) 23, 452, 543
Tru9I TTAA 3 cut(s) 23, 452, 543
TseI GCWGC 2 cut(s) 146, 209
TspGWI ACGGA 3 cut(s) 35, 97, 248
TspMI CCCGGG 1 cut(s) 75
Vha464I CTTAAG 1 cut(s) 22
VpaK11BI GGWCC 4 cut(s) 181, 187, 340, 410
XapI RAATTY 1 cut(s) 538
XhoI CTCGAG 1 cut(s) 150
XmaI CCCGGG 1 cut(s) 75
XmiI GTMKAC 1 cut(s) 61
ZraI GACGTC 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.