Rroxscaffold_19G00448970

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000019
OG0000098
Physical Location & Seq
Forward (+)
51865 .. 53209
1345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_19G00448970.1

Sequence Viewer

Length: 1122 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTATCCCCGTGGTAACTTTTCTCGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACCGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCCGACAATGTCTTCCGCCCGGATCAGCCCGCCGAAGCAGTGCTTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGACTAGAGTCAAGCTCAACAGGTCTTCTTTCCCCGCCGATTCTGCCAAGCCCGTTCCCTTGGCCGTGGTTTCGCCGGATAGTAGACAGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCGAGTCGACCGTTGAACGCCCGGGAAAGCCCCCGAAGGAGCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCGACGGGTTCGGGATCGGGACCCCCGTGCCCAGCCCTCGCAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCGCAGGCTGTTCACCTTGGAGACCCGATGCGGTTATGAGTACGACCGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCCGGACCCTACCTCCGGCCGAGCCGTTTCCAGTGGTGGGCAGGCTGTTAAACGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGACTCCCTAACGTTGCCGTCAACCACCACGTCCCGGTTCAGAATTTTAACCCGATTCCCTTTTCGAAGTTCGCGCGAGACGCGCTATCGACGGGGTTACCCGCCTCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

373

Amino Acids

41.94

Weight (kDa)

10.54

Isoelectric Point (pI)

62.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 252
AatII GACGTC 1 cut(s) 1009
Acc36I ACCTGC 1 cut(s) 252
AccBSI CCGCTC 1 cut(s) 643
AccI GTMKAC 2 cut(s) 466, 569
AccII CGCG 7 cut(s) 504, 633, 652, 898, 1085, 1087, 1094
AccIII TCCGGA 1 cut(s) 858
AclI AACGTT 1 cut(s) 1023
AclWI GGATC 6 cut(s) 34, 136, 318, 702, 742, 755
AcoI YGGCCR 3 cut(s) 444, 623, 937
AcsI RAATTY 2 cut(s) 110, 1054
AcyI GRCGYC 1 cut(s) 1006
AfaI GTAC 3 cut(s) 163, 557, 830
AfiI CCNNNNNNNGG 9 cut(s) 346, 372, 621, 625, 632, 922, 935, 957, 1045
AgsI TTSAA 2 cut(s) 578, 868
AjiI CACGTC 2 cut(s) 902, 1042
AluBI AGCT 5 cut(s) 105, 186, 229, 397, 661
AluI AGCT 5 cut(s) 105, 186, 229, 397, 661
Alw21I GWGCWC 2 cut(s) 231, 912
Alw26I GTCTC 3 cut(s) 803, 1013, 1083
AlwI GGATC 6 cut(s) 34, 136, 318, 702, 742, 755
Ama87I CYCGRG 4 cut(s) 583, 662, 736, 990
Aor13HI TCCGGA 1 cut(s) 858
AoxI GGCC 6 cut(s) 136, 444, 623, 871, 937, 994
ApeKI GCWGC 3 cut(s) 58, 658, 721
ApoI RAATTY 2 cut(s) 110, 1054
AspLEI GCGC 4 cut(s) 504, 884, 1087, 1096
AspS9I GGNCC 7 cut(s) 337, 506, 700, 853, 871, 925, 995
AsuC2I CCSGG 6 cut(s) 308, 584, 585, 622, 878, 1046
AsuHPI GGTGA 2 cut(s) 664, 793
AsuII TTCGAA 1 cut(s) 1076
AvaI CYCGRG 4 cut(s) 583, 662, 736, 990
AvaII GGWCC 5 cut(s) 337, 506, 700, 853, 925
BaeGI GKGCMC 2 cut(s) 359, 712
BamHI GGATCC 1 cut(s) 747
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 206
BbsI GAAGAC 2 cut(s) 292, 399
Bbv12I GWGCWC 2 cut(s) 231, 912
BbvI GCAGC 3 cut(s) 45, 670, 733
BccI CCATC 1 cut(s) 517
BceAI ACGGC 3 cut(s) 431, 929, 1013
BcnI CCSGG 6 cut(s) 308, 584, 585, 622, 878, 1046
BcoDI GTCTC 3 cut(s) 803, 1013, 1083
BfaI CTAG 2 cut(s) 102, 387
BfuAI ACCTGC 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 879
BisI GCNGC 9 cut(s) 59, 69, 269, 634, 650, 659, 722, 874, 920
BlsI GCNGC 9 cut(s) 60, 70, 270, 635, 651, 660, 723, 875, 921
Bme1390I CCNGG 6 cut(s) 308, 584, 585, 622, 878, 1046
Bme18I GGWCC 5 cut(s) 337, 506, 700, 853, 925
BmeT110I CYCGRG 4 cut(s) 583, 662, 736, 990
BmgBI CACGTC 2 cut(s) 902, 1042
BmgT120I GGNCC 7 cut(s) 337, 506, 700, 853, 871, 925, 995
BmiI GGNNCC 6 cut(s) 338, 701, 702, 749, 927, 997
BmrFI CCNGG 6 cut(s) 308, 584, 585, 622, 878, 1046
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 1 cut(s) 806
BmuI ACTGGG 1 cut(s) 604
BoxI GACNNNNGTC 1 cut(s) 389
BpiI GAAGAC 2 cut(s) 292, 399
BplI GAGNNNNNCTC 2 cut(s) 381, 413
Bpu14I TTCGAA 1 cut(s) 1076
BpuMI CCSGG 6 cut(s) 308, 584, 585, 622, 878, 1046
Bsa29I ATCGAT 1 cut(s) 131
BsaHI GRCGYC 1 cut(s) 1006
BsaI GGTCTC 1 cut(s) 803
BsaWI WCCGGW 3 cut(s) 164, 858, 886
BsaXI ACNNNNNCTCC 2 cut(s) 917, 947
Bsc4I CCNNNNNNNGG 9 cut(s) 346, 372, 621, 625, 632, 922, 935, 957, 1045
Bse118I RCCGGY 2 cut(s) 625, 834
Bse1I ACTGG 3 cut(s) 559, 610, 951
Bse3DI GCAATG 1 cut(s) 521
BseAI TCCGGA 1 cut(s) 858
BseCI ATCGAT 1 cut(s) 131
BseLI CCNNNNNNNGG 9 cut(s) 346, 372, 621, 625, 632, 922, 935, 957, 1045
BseMI GCAATG 1 cut(s) 521
BseNI ACTGG 3 cut(s) 559, 610, 951
BseSI GKGCMC 2 cut(s) 359, 712
BseX3I CGGCCG 2 cut(s) 623, 937
BseXI GCAGC 3 cut(s) 45, 670, 733
BseYI CCCAGC 2 cut(s) 273, 711
Bsh1236I CGCG 7 cut(s) 504, 633, 652, 898, 1085, 1087, 1094
Bsh1285I CGRYCG 4 cut(s) 573, 626, 835, 940
BshFI GGCC 6 cut(s) 138, 446, 625, 873, 939, 996
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 4 cut(s) 573, 626, 835, 940
BsiHKAI GWGCWC 2 cut(s) 231, 912
BsiHKCI CYCGRG 4 cut(s) 583, 662, 736, 990
BslFI GGGAC 3 cut(s) 602, 713, 1028
BslI CCNNNNNNNGG 9 cut(s) 346, 372, 621, 625, 632, 922, 935, 957, 1045
BsmAI GTCTC 3 cut(s) 803, 1013, 1083
BsmBI CGTCTC 2 cut(s) 1013, 1083
BsmFI GGGAC 3 cut(s) 602, 713, 1028
BsnI GGCC 6 cut(s) 138, 446, 625, 873, 939, 996
Bso31I GGTCTC 1 cut(s) 803
BsoBI CYCGRG 4 cut(s) 583, 662, 736, 990
Bsp119I TTCGAA 1 cut(s) 1076
Bsp1286I GDGCHC 4 cut(s) 231, 359, 712, 912
Bsp13I TCCGGA 1 cut(s) 858
Bsp143I GATC 5 cut(s) 26, 128, 310, 694, 747
BspANI GGCC 6 cut(s) 138, 446, 625, 873, 939, 996
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 858
BspFNI CGCG 7 cut(s) 504, 633, 652, 898, 1085, 1087, 1094
BspLI GGNNCC 6 cut(s) 338, 701, 702, 749, 927, 997
BspMI ACCTGC 1 cut(s) 252
BspPI GGATC 6 cut(s) 34, 136, 318, 702, 742, 755
BspQI GCTCTTC 2 cut(s) 4, 917
BspT104I TTCGAA 1 cut(s) 1076
BspTNI GGTCTC 1 cut(s) 803
BsrBI CCGCTC 1 cut(s) 643
BsrDI GCAATG 1 cut(s) 521
BsrFI RCCGGY 2 cut(s) 625, 834
BsrI ACTGG 3 cut(s) 559, 610, 951
BssAI RCCGGY 2 cut(s) 625, 834
BssMI GATC 5 cut(s) 26, 128, 310, 694, 747
BssNI GRCGYC 1 cut(s) 1006
BssSI CACGAG 1 cut(s) 206
BssT1I CCWWGG 2 cut(s) 441, 804
Bst2BI CACGAG 1 cut(s) 206
Bst4CI ACNGT 4 cut(s) 151, 476, 537, 574
Bst6I CTCTTC 3 cut(s) 4, 917, 991
BstACI GRCGYC 1 cut(s) 1006
BstBI TTCGAA 1 cut(s) 1076
BstC8I GCNNGC 5 cut(s) 318, 627, 631, 794, 963
BstDEI CTNAG 2 cut(s) 235, 1119
BstDSI CCRYGG 3 cut(s) 78, 447, 650
BstEII GGTNACC 1 cut(s) 1107
BstFNI CGCG 7 cut(s) 504, 633, 652, 898, 1085, 1087, 1094
BstHHI GCGC 4 cut(s) 504, 884, 1087, 1096
BstKTI GATC 5 cut(s) 29, 131, 313, 697, 750
BstMAI GTCTC 3 cut(s) 803, 1013, 1083
BstMBI GATC 5 cut(s) 26, 128, 310, 694, 747
BstMCI CGRYCG 4 cut(s) 573, 626, 835, 940
BstPAI GACNNNNGTC 1 cut(s) 389
BstPI GGTNACC 1 cut(s) 1107
BstSCI CCNGG 6 cut(s) 306, 582, 583, 620, 876, 1044
BstSLI GKGCMC 2 cut(s) 359, 712
BstUI CGCG 7 cut(s) 504, 633, 652, 898, 1085, 1087, 1094
BstV1I GCAGC 3 cut(s) 45, 670, 733
BstV2I GAAGAC 2 cut(s) 292, 399
BstX2I RGATCY 1 cut(s) 747
BstYI RGATCY 1 cut(s) 747
BstZI CGGCCG 2 cut(s) 623, 937
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 6 cut(s) 138, 446, 625, 873, 939, 996
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 3 cut(s) 78, 447, 650
BtgZI GCGATG 1 cut(s) 495
BtrI CACGTC 2 cut(s) 902, 1042
BtsI GCAGTG 2 cut(s) 333, 359
BtsIMutI CAGTG 4 cut(s) 333, 359, 481, 958
BveI ACCTGC 1 cut(s) 252
Cac8I GCNNGC 5 cut(s) 318, 627, 631, 794, 963
CfoI GCGC 4 cut(s) 504, 884, 1087, 1096
Cfr10I RCCGGY 2 cut(s) 625, 834
Cfr13I GGNCC 7 cut(s) 337, 506, 700, 853, 871, 925, 995
Cfr42I CCGCGG 1 cut(s) 653
Cfr9I CCCGGG 1 cut(s) 583
ClaI ATCGAT 1 cut(s) 131
CseI GACGC 1 cut(s) 1100
Csp6I GTAC 3 cut(s) 162, 556, 829
CviAII CATG 1 cut(s) 499
CviQI GTAC 3 cut(s) 162, 556, 829
DdeI CTNAG 2 cut(s) 235, 1119
DpnI GATC 5 cut(s) 28, 130, 312, 696, 749
DpnII GATC 5 cut(s) 26, 128, 310, 694, 747
DraI TTTAAA 1 cut(s) 109
EaeI YGGCCR 3 cut(s) 444, 623, 937
EagI CGGCCG 2 cut(s) 623, 937
Eam1104I CTCTTC 3 cut(s) 4, 917, 991
EarI CTCTTC 3 cut(s) 4, 917, 991
EciI GGCGGA 1 cut(s) 293
Ecl136II GAGCTC 1 cut(s) 229
EclXI CGGCCG 2 cut(s) 623, 937
Eco130I CCWWGG 2 cut(s) 441, 804
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 803
Eco47I GGWCC 5 cut(s) 337, 506, 700, 853, 925
Eco52I CGGCCG 2 cut(s) 623, 937
Eco53kI GAGCTC 1 cut(s) 229
Eco88I CYCGRG 4 cut(s) 583, 662, 736, 990
Eco91I GGTNACC 1 cut(s) 1107
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 2 cut(s) 700, 995
EcoO65I GGTNACC 1 cut(s) 1107
EcoT14I CCWWGG 2 cut(s) 441, 804
EcoT38I GRGCYC 1 cut(s) 231
ErhI CCWWGG 2 cut(s) 441, 804
Esp3I CGTCTC 2 cut(s) 1013, 1083
FaeI CATG 1 cut(s) 502
FaiI YATR 3 cut(s) 47, 500, 825
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FaqI GGGAC 3 cut(s) 602, 713, 1028
FatI CATG 1 cut(s) 498
FauI CCCGC 6 cut(s) 325, 367, 424, 648, 1007, 1120
FblI GTMKAC 2 cut(s) 466, 569
Fnu4HI GCNGC 9 cut(s) 59, 69, 269, 634, 650, 659, 722, 874, 920
FriOI GRGCYC 1 cut(s) 231
Fsp4HI GCNGC 9 cut(s) 59, 69, 269, 634, 650, 659, 722, 874, 920
FspBI CTAG 2 cut(s) 102, 387
GlaI GCGC 4 cut(s) 503, 883, 1086, 1095
GluI GCNGC 9 cut(s) 59, 69, 269, 634, 650, 659, 722, 874, 920
GsaI CCCAGC 2 cut(s) 277, 715
HaeIII GGCC 6 cut(s) 138, 446, 625, 873, 939, 996
HgaI GACGC 1 cut(s) 1100
HhaI GCGC 4 cut(s) 504, 884, 1087, 1096
Hin1I GRCGYC 1 cut(s) 1006
Hin1II CATG 1 cut(s) 502
Hin6I GCGC 4 cut(s) 502, 882, 1085, 1094
HinP1I GCGC 4 cut(s) 502, 882, 1085, 1094
HincII GTYRAC 2 cut(s) 570, 1033
HindII GTYRAC 2 cut(s) 570, 1033
HinfI GANTC 9 cut(s) 175, 368, 390, 422, 481, 542, 566, 1014, 1066
HphI GGTGA 2 cut(s) 664, 793
Hpy166II GTNNAC 5 cut(s) 467, 570, 672, 801, 1033
Hpy188I TCNGA 6 cut(s) 174, 367, 384, 541, 1013, 1053
Hpy188III TCNNGA 6 cut(s) 92, 692, 698, 736, 859, 990
Hpy8I GTNNAC 5 cut(s) 467, 570, 672, 801, 1033
Hpy99I CGWCG 5 cut(s) 44, 687, 903, 1008, 1105
HpyAV CCTTC 2 cut(s) 17, 592
HpyCH4III ACNGT 4 cut(s) 151, 476, 537, 574
HpyCH4IV ACGT 5 cut(s) 39, 901, 1006, 1023, 1041
HpyF3I CTNAG 2 cut(s) 235, 1119
HpySE526I ACGT 5 cut(s) 39, 901, 1006, 1023, 1041
Hsp92I GRCGYC 1 cut(s) 1006
Hsp92II CATG 1 cut(s) 502
HspAI GCGC 4 cut(s) 502, 882, 1085, 1094
KflI GGGWCCC 1 cut(s) 700
Kpn2I TCCGGA 1 cut(s) 858
KroI GCCGGC 1 cut(s) 625
KroNI GCCGGC 1 cut(s) 627
KspI CCGCGG 1 cut(s) 653
Kzo9I GATC 5 cut(s) 26, 128, 310, 694, 747
LguI GCTCTTC 2 cut(s) 4, 917
LmnI GCTCC 1 cut(s) 601
Lsp1109I GCAGC 3 cut(s) 45, 670, 733
LweI GCATC 1 cut(s) 806
MaeI CTAG 2 cut(s) 102, 387
MaeII ACGT 5 cut(s) 39, 901, 1006, 1023, 1041
MaeIII GTNAC 3 cut(s) 82, 741, 1107
MalI GATC 5 cut(s) 28, 130, 312, 696, 749
MbiI CCGCTC 1 cut(s) 643
MboI GATC 5 cut(s) 26, 128, 310, 694, 747
MboII GAAGA 5 cut(s) 21, 292, 399, 904, 978
MflI RGATCY 1 cut(s) 747
MhlI GDGCHC 4 cut(s) 231, 359, 712, 912
MluCI AATT 3 cut(s) 110, 528, 1054
MlyI GAGTC 3 cut(s) 399, 575, 1008
MmeI TCCRAC 2 cut(s) 519, 1036
MnlI CCTC 8 cut(s) 109, 340, 373, 727, 732, 866, 943, 986
MroI TCCGGA 1 cut(s) 858
MroNI GCCGGC 1 cut(s) 625
MseI TTAA 7 cut(s) 108, 257, 489, 527, 531, 969, 1059
MslI CAYNNNNRTG 1 cut(s) 514
MspA1I CMGCKG 1 cut(s) 652
MspR9I CCNGG 6 cut(s) 308, 584, 585, 622, 878, 1046
MvnI CGCG 7 cut(s) 504, 633, 652, 898, 1085, 1087, 1094
NaeI GCCGGC 1 cut(s) 627
NciI CCSGG 6 cut(s) 308, 584, 585, 622, 878, 1046
NdeII GATC 5 cut(s) 26, 128, 310, 694, 747
NgoMIV GCCGGC 1 cut(s) 625
NlaIII CATG 1 cut(s) 502
NlaIV GGNNCC 6 cut(s) 338, 701, 702, 749, 927, 997
NmeAIII GCCGAG 1 cut(s) 965
NspV TTCGAA 1 cut(s) 1076
PacI TTAATTAA 1 cut(s) 531
PaeR7I CTCGAG 1 cut(s) 662
PaqCI CACCTGC 1 cut(s) 252
PciSI GCTCTTC 2 cut(s) 4, 917
PcsI WCGNNNNNNNCGW 2 cut(s) 570, 703
PdiI GCCGGC 1 cut(s) 627
PfeI GAWTC 6 cut(s) 175, 368, 422, 481, 542, 1066
PflFI GACNNNGTC 1 cut(s) 296
PkrI GCNGC 9 cut(s) 60, 70, 270, 635, 651, 660, 723, 875, 921
PleI GAGTC 3 cut(s) 398, 574, 1008
PpsI GAGTC 3 cut(s) 398, 574, 1008
PpuMI RGGWCCY 1 cut(s) 700
PshAI GACNNNNGTC 1 cut(s) 389
Psp124BI GAGCTC 1 cut(s) 231
Psp1406I AACGTT 1 cut(s) 1023
Psp5II RGGWCCY 1 cut(s) 700
PspEI GGTNACC 1 cut(s) 1107
PspFI CCCAGC 2 cut(s) 273, 711
PspN4I GGNNCC 6 cut(s) 338, 701, 702, 749, 927, 997
PspPI GGNCC 7 cut(s) 337, 506, 700, 853, 871, 925, 995
PspPPI RGGWCCY 1 cut(s) 700
PspXI VCTCGAGB 1 cut(s) 662
PsuI RGATCY 1 cut(s) 747
PsyI GACNNNGTC 1 cut(s) 296
RsaI GTAC 3 cut(s) 163, 557, 830
RsaNI GTAC 3 cut(s) 162, 556, 829
RseI CAYNNNNRTG 1 cut(s) 514
SacI GAGCTC 1 cut(s) 231
SacII CCGCGG 1 cut(s) 653
SalI GTCGAC 1 cut(s) 568
SapI GCTCTTC 2 cut(s) 4, 917
SaqAI TTAA 7 cut(s) 108, 257, 489, 527, 531, 969, 1059
SatI GCNGC 9 cut(s) 59, 69, 269, 634, 650, 659, 722, 874, 920
Sau3AI GATC 5 cut(s) 26, 128, 310, 694, 747
Sau96I GGNCC 7 cut(s) 337, 506, 700, 853, 871, 925, 995
SchI GAGTC 3 cut(s) 399, 575, 1008
ScrFI CCNGG 6 cut(s) 308, 584, 585, 622, 878, 1046
SduI GDGCHC 4 cut(s) 231, 359, 712, 912
SfaNI GCATC 1 cut(s) 806
Sfr274I CTCGAG 1 cut(s) 662
Sfr303I CCGCGG 1 cut(s) 653
SfuI TTCGAA 1 cut(s) 1076
SgrBI CCGCGG 1 cut(s) 653
SinI GGWCC 5 cut(s) 337, 506, 700, 853, 925
SlaI CTCGAG 1 cut(s) 662
SmaI CCCGGG 1 cut(s) 585
SmiMI CAYNNNNRTG 1 cut(s) 514
SmlI CTYRAG 1 cut(s) 662
SmoI CTYRAG 1 cut(s) 662
Sse9I AATT 3 cut(s) 110, 528, 1054
SspMI CTAG 2 cut(s) 102, 387
SstI GAGCTC 1 cut(s) 231
StyD4I CCNGG 6 cut(s) 306, 582, 583, 620, 876, 1044
StyI CCWWGG 2 cut(s) 441, 804
TaaI ACNGT 4 cut(s) 151, 476, 537, 574
TaiI ACGT 5 cut(s) 42, 904, 1009, 1026, 1044
TaqI TCGA 8 cut(s) 21, 93, 131, 564, 569, 663, 1076, 1100
TaqII GACCGA 1 cut(s) 841
TasI AATT 3 cut(s) 110, 528, 1054
TauI GCSGC 6 cut(s) 71, 271, 636, 652, 876, 922
TfiI GAWTC 6 cut(s) 175, 368, 422, 481, 542, 1066
Tru1I TTAA 7 cut(s) 108, 257, 489, 527, 531, 969, 1059
Tru9I TTAA 7 cut(s) 108, 257, 489, 527, 531, 969, 1059
TscAI CASTG 4 cut(s) 333, 359, 481, 958
TseI GCWGC 3 cut(s) 58, 658, 721
TspDTI ATGAA 2 cut(s) 62, 487
TspGWI ACGGA 4 cut(s) 388, 543, 604, 760
TspMI CCCGGG 1 cut(s) 583
TspRI CASTG 4 cut(s) 333, 359, 481, 958
Tth111I GACNNNGTC 1 cut(s) 296
VpaK11BI GGWCC 5 cut(s) 337, 506, 700, 853, 925
XapI RAATTY 2 cut(s) 110, 1054
XhoI CTCGAG 1 cut(s) 662
XmaI CCCGGG 1 cut(s) 583
XmiI GTMKAC 2 cut(s) 466, 569
XspI CTAG 2 cut(s) 102, 387
ZraI GACGTC 1 cut(s) 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.