Rroxscaffold_17G00435810

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000017
OG0000098
Physical Location & Seq
Forward (+)
385780 .. 386940
1161 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_17G00435810.1

Sequence Viewer

Length: 765 bp
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCGCTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTTAAATTCCAAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGATGTGCCGCCCCAGCCAAACTCCCCACCCTGACAATGTCTTCCGCCCGGATCAGCCGCCGAAGCGGCTTTGGGTCCAAAAGAGGGGCAGTGCCCCGCCTCCGATTCACGGAATAATCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTCGACGTTGAACGCCCGGGAAAGCCCCGAAGGAGCGTTCCCAGTCCGTCCCCGGCCGGCACGCGGCGACCCGCTCTCGCCGCGGAAGCAGCTCGAGCAGTTCACCGACAGCCCGACGGGTTCGGGACTGGGACCCCGTGCCCAGCCCTCGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAATGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

254

Amino Acids

27.47

Weight (kDa)

10.66

Isoelectric Point (pI)

57.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000098)

Species Orthologous Gene IDs
pyrus_communis pycom05g23460 pycom581g00100 pycom849g00040
rosa_multiflora Rmu_sc0019961.1_g000001
rosa_roxburghii Rroxscaffold_100G00451180 Rroxscaffold_102G00450890 Rroxscaffold_102G00450920 Rroxscaffold_103G00450530 Rroxscaffold_103G00450560 Rroxscaffold_104G00444830 Rroxscaffold_104G00444900 Rroxscaffold_105G00447100 Rroxscaffold_105G00447180 Rroxscaffold_107G00442470 Rroxscaffold_107G00442480 Rroxscaffold_107G00442520 Rroxscaffold_107G00442540 Rroxscaffold_107G00442560 Rroxscaffold_107G00442570 Rroxscaffold_107G00442600 Rroxscaffold_107G00442630 Rroxscaffold_107G00442650 Rroxscaffold_107G00442660 Rroxscaffold_108G00451480 Rroxscaffold_110G00451510 Rroxscaffold_111G00451550 Rroxscaffold_112G00451590 Rroxscaffold_113G00451630 Rroxscaffold_114G00451650 Rroxscaffold_116G00451710 Rroxscaffold_117G00451740 Rroxscaffold_117G00451750 Rroxscaffold_121G00451840 Rroxscaffold_122G00451860 Rroxscaffold_122G00451880 Rroxscaffold_123G00451920 Rroxscaffold_124G00451950 Rroxscaffold_128G00452040 Rroxscaffold_128G00452060 Rroxscaffold_12G00450600 Rroxscaffold_12G00450620 Rroxscaffold_131G00452110 Rroxscaffold_138G00452180 Rroxscaffold_13G00448630 Rroxscaffold_145G00452240 Rroxscaffold_14G00441930 Rroxscaffold_14G00441950 Rroxscaffold_14G00442050 Rroxscaffold_14G00442080 Rroxscaffold_15G00447500 Rroxscaffold_162G00450770 Rroxscaffold_16G00446200 Rroxscaffold_16G00446210 Rroxscaffold_16G00446240 Rroxscaffold_17G00435360 Rroxscaffold_17G00435410 Rroxscaffold_17G00435450 Rroxscaffold_17G00435480 Rroxscaffold_17G00435500 Rroxscaffold_17G00435600 Rroxscaffold_17G00435660 Rroxscaffold_17G00435680 Rroxscaffold_17G00435760 Rroxscaffold_17G00435780 Rroxscaffold_17G00435810 Rroxscaffold_17G00435840 Rroxscaffold_17G00435870 Rroxscaffold_18G00446030 Rroxscaffold_18G00446060 Rroxscaffold_18G00446130 Rroxscaffold_19G00448890 Rroxscaffold_19G00448920 Rroxscaffold_19G00448940 Rroxscaffold_19G00448970 Rroxscaffold_1G00000020 Rroxscaffold_1G00000050 Rroxscaffold_1G00000160 Rroxscaffold_20G00445060 Rroxscaffold_20G00445100 Rroxscaffold_20G00445130 Rroxscaffold_21G00439490 Rroxscaffold_21G00439560 Rroxscaffold_21G00439580 Rroxscaffold_21G00439620 Rroxscaffold_21G00439630 Rroxscaffold_22G00439910 Rroxscaffold_22G00439950 Rroxscaffold_23G00451020 Rroxscaffold_23G00451040 Rroxscaffold_23G00451070 Rroxscaffold_24G00444920 Rroxscaffold_24G00444950 Rroxscaffold_24G00445000 Rroxscaffold_25G00450200 Rroxscaffold_26G00447730 Rroxscaffold_27G00446570 Rroxscaffold_27G00446600 Rroxscaffold_28G00446830 Rroxscaffold_28G00446860 Rroxscaffold_28G00446910 Rroxscaffold_29G00441560 Rroxscaffold_29G00441570 Rroxscaffold_29G00441590 Rroxscaffold_29G00441630 Rroxscaffold_29G00441640 Rroxscaffold_29G00441670 Rroxscaffold_29G00441680 Rroxscaffold_29G00441860 Rroxscaffold_30G00449540 Rroxscaffold_30G00449570 Rroxscaffold_30G00449580 Rroxscaffold_31G00438120 Rroxscaffold_31G00438140 Rroxscaffold_31G00438180 Rroxscaffold_31G00438190 Rroxscaffold_31G00438220 Rroxscaffold_31G00438230 Rroxscaffold_32G00442740 Rroxscaffold_32G00442760 Rroxscaffold_33G00439670 Rroxscaffold_33G00439720 Rroxscaffold_33G00439740 Rroxscaffold_33G00439760 Rroxscaffold_33G00439820 Rroxscaffold_34G00443140 Rroxscaffold_34G00443200 Rroxscaffold_34G00443250 Rroxscaffold_34G00443370 Rroxscaffold_34G00443390 Rroxscaffold_35G00441050 Rroxscaffold_35G00441080 Rroxscaffold_35G00441090 Rroxscaffold_35G00441170 Rroxscaffold_35G00441190 Rroxscaffold_35G00441230 Rroxscaffold_36G00440100 Rroxscaffold_36G00440170 Rroxscaffold_37G00445170 Rroxscaffold_38G00444440 Rroxscaffold_38G00444500 Rroxscaffold_38G00444550 Rroxscaffold_39G00448200 Rroxscaffold_39G00448210 Rroxscaffold_40G00447650 Rroxscaffold_40G00447680 Rroxscaffold_40G00447700 Rroxscaffold_40G00447710 Rroxscaffold_41G00451110 Rroxscaffold_41G00451130 Rroxscaffold_42G00450430 Rroxscaffold_43G00449800 Rroxscaffold_43G00449860 Rroxscaffold_43G00449920 Rroxscaffold_43G00449930 Rroxscaffold_44G00440540 Rroxscaffold_44G00440580 Rroxscaffold_44G00440660 Rroxscaffold_45G00438900 Rroxscaffold_45G00438930 Rroxscaffold_45G00438950 Rroxscaffold_47G00444020 Rroxscaffold_47G00444060 Rroxscaffold_47G00444120 Rroxscaffold_48G00448450 Rroxscaffold_49G00438570 Rroxscaffold_49G00438650 Rroxscaffold_49G00438700 Rroxscaffold_4G00321080 Rroxscaffold_50G00444130 Rroxscaffold_50G00444200 Rroxscaffold_50G00444210 Rroxscaffold_50G00444330 Rroxscaffold_50G00444350 Rroxscaffold_51G00447840 Rroxscaffold_52G00439310 Rroxscaffold_52G00439390 Rroxscaffold_54G00443660 Rroxscaffold_55G00450020 Rroxscaffold_55G00450050 Rroxscaffold_55G00450060 Rroxscaffold_55G00450080 Rroxscaffold_55G00450090 Rroxscaffold_55G00450120 Rroxscaffold_57G00443070 Rroxscaffold_59G00442210 Rroxscaffold_59G00442220 Rroxscaffold_60G00448360 Rroxscaffold_60G00448370 Rroxscaffold_60G00448410 Rroxscaffold_61G00449990 Rroxscaffold_62G00438040 Rroxscaffold_62G00438060 Rroxscaffold_62G00438080 Rroxscaffold_63G00444410 Rroxscaffold_63G00444430 Rroxscaffold_64G00450670 Rroxscaffold_65G00445300 Rroxscaffold_65G00445340 Rroxscaffold_65G00445360 Rroxscaffold_65G00445380 Rroxscaffold_65G00445420 Rroxscaffold_66G00437660 Rroxscaffold_66G00437820 Rroxscaffold_66G00437840 Rroxscaffold_66G00437890 Rroxscaffold_67G00448140 Rroxscaffold_67G00448150 Rroxscaffold_68G00447010 Rroxscaffold_69G00446670 Rroxscaffold_69G00446710 Rroxscaffold_69G00446770 Rroxscaffold_6G00387820 Rroxscaffold_70G00446300 Rroxscaffold_70G00446340 Rroxscaffold_70G00446380 Rroxscaffold_71G00445590 Rroxscaffold_71G00445600 Rroxscaffold_71G00445630 Rroxscaffold_71G00445690 Rroxscaffold_71G00445720 Rroxscaffold_71G00445740 Rroxscaffold_71G00445770 Rroxscaffold_72G00449370 Rroxscaffold_72G00449410 Rroxscaffold_72G00449450 Rroxscaffold_73G00439000 Rroxscaffold_73G00439060 Rroxscaffold_73G00439160 Rroxscaffold_73G00439270 Rroxscaffold_74G00442920 Rroxscaffold_75G00447260 Rroxscaffold_75G00447290 Rroxscaffold_75G00447430 Rroxscaffold_76G00448540 Rroxscaffold_76G00448610 Rroxscaffold_77G00449150 Rroxscaffold_78G00449610 Rroxscaffold_79G00450210 Rroxscaffold_80G00450330 Rroxscaffold_80G00450350 Rroxscaffold_81G00450480 Rroxscaffold_83G00450980 Rroxscaffold_85G00451230 Rroxscaffold_86G00451270 Rroxscaffold_89G00451410 Rroxscaffold_90G00448760 Rroxscaffold_90G00448770 Rroxscaffold_90G00448820 Rroxscaffold_91G00443000 Rroxscaffold_91G00443060 Rroxscaffold_92G00446430 Rroxscaffold_93G00440830 Rroxscaffold_93G00440850 Rroxscaffold_93G00440860 Rroxscaffold_93G00440880 Rroxscaffold_93G00440910 Rroxscaffold_94G00445830 Rroxscaffold_94G00445910 Rroxscaffold_94G00445940 Rroxscaffold_94G00446020 Rroxscaffold_97G00442340 Rroxscaffold_97G00442390 Rroxscaffold_97G00442400 Rroxscaffold_98G00451350

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 745
AccBSI CCGCTC 1 cut(s) 466
AccI GTMKAC 2 cut(s) 352, 395
AccII CGCG 3 cut(s) 456, 475, 721
AccIII TCCGGA 1 cut(s) 681
AclWI GGATC 5 cut(s) 34, 136, 207, 564, 577
AcoI YGGCCR 1 cut(s) 446
AcsI RAATTY 1 cut(s) 110
AdeI CACNNNGTG 1 cut(s) 153
AfaI GTAC 2 cut(s) 382, 652
AfiI CCNNNNNNNGG 5 cut(s) 232, 257, 455, 745, 758
AgsI TTSAA 2 cut(s) 403, 691
AjiI CACGTC 1 cut(s) 725
AluBI AGCT 3 cut(s) 105, 282, 484
AluI AGCT 3 cut(s) 105, 282, 484
Alw21I GWGCWC 1 cut(s) 735
Alw26I GTCTC 1 cut(s) 625
AlwI GGATC 5 cut(s) 34, 136, 207, 564, 577
AlwNI CAGNNNCTG 2 cut(s) 618, 745
Ama87I CYCGRG 4 cut(s) 408, 485, 541, 558
Aor13HI TCCGGA 1 cut(s) 681
AoxI GGCC 3 cut(s) 136, 446, 694
ApeKI GCWGC 2 cut(s) 58, 481
ApoI RAATTY 1 cut(s) 110
AspLEI GCGC 1 cut(s) 707
AspS9I GGNCC 5 cut(s) 223, 524, 676, 694, 748
AsuC2I CCSGG 6 cut(s) 197, 409, 410, 445, 658, 701
AsuHPI GGTGA 2 cut(s) 487, 615
AvaI CYCGRG 4 cut(s) 408, 485, 541, 558
AvaII GGWCC 4 cut(s) 223, 524, 676, 748
BaeGI GKGCMC 2 cut(s) 244, 535
BamHI GGATCC 1 cut(s) 569
BbsI GAAGAC 2 cut(s) 181, 285
Bbv12I GWGCWC 1 cut(s) 735
BbvI GCAGC 2 cut(s) 45, 493
BcnI CCSGG 6 cut(s) 197, 409, 410, 445, 658, 701
BcoDI GTCTC 1 cut(s) 625
BfaI CTAG 2 cut(s) 102, 272
BglI GCCNNNNNGGC 2 cut(s) 214, 702
Bme1390I CCNGG 6 cut(s) 197, 409, 410, 445, 658, 701
Bme18I GGWCC 4 cut(s) 223, 524, 676, 748
BmeT110I CYCGRG 4 cut(s) 408, 485, 541, 558
BmgBI CACGTC 1 cut(s) 725
BmgT120I GGNCC 5 cut(s) 223, 524, 676, 694, 748
BmiI GGNNCC 5 cut(s) 224, 525, 526, 571, 750
BmrFI CCNGG 6 cut(s) 197, 409, 410, 445, 658, 701
BmrI ACTGGG 2 cut(s) 428, 530
BmsI GCATC 1 cut(s) 628
BmuI ACTGGG 2 cut(s) 428, 530
BoxI GACNNNNGTC 1 cut(s) 274
BpiI GAAGAC 2 cut(s) 181, 285
BplI GAGNNNNNCTC 2 cut(s) 266, 298
BpuMI CCSGG 6 cut(s) 197, 409, 410, 445, 658, 701
Bsa29I ATCGAT 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 625
BsaJI CCNNGG 7 cut(s) 327, 408, 443, 473, 559, 626, 700
BsaWI WCCGGW 2 cut(s) 681, 709
BsaXI ACNNNNNCTCC 1 cut(s) 740
Bsc4I CCNNNNNNNGG 5 cut(s) 232, 257, 455, 745, 758
Bse118I RCCGGY 1 cut(s) 448
Bse1I ACTGG 3 cut(s) 384, 434, 525
BseAI TCCGGA 1 cut(s) 681
BseCI ATCGAT 1 cut(s) 131
BseDI CCNNGG 7 cut(s) 327, 408, 443, 473, 559, 626, 700
BseLI CCNNNNNNNGG 5 cut(s) 232, 257, 455, 745, 758
BseMII CTCAG 1 cut(s) 381
BseNI ACTGG 3 cut(s) 384, 434, 525
BseSI GKGCMC 2 cut(s) 244, 535
BseX3I CGGCCG 1 cut(s) 446
BseXI GCAGC 2 cut(s) 45, 493
BseYI CCCAGC 2 cut(s) 161, 534
Bsh1236I CGCG 3 cut(s) 456, 475, 721
Bsh1285I CGRYCG 2 cut(s) 449, 657
BshFI GGCC 3 cut(s) 138, 448, 696
BshVI ATCGAT 1 cut(s) 131
BsiEI CGRYCG 2 cut(s) 449, 657
BsiHKAI GWGCWC 1 cut(s) 735
BsiHKCI CYCGRG 4 cut(s) 408, 485, 541, 558
BsiSI CCGG 9 cut(s) 197, 409, 445, 449, 657, 682, 700, 710, 759
BslFI GGGAC 4 cut(s) 372, 426, 531, 537
BslI CCNNNNNNNGG 5 cut(s) 232, 257, 455, 745, 758
BsmAI GTCTC 1 cut(s) 625
BsmFI GGGAC 4 cut(s) 372, 426, 531, 537
BsnI GGCC 3 cut(s) 138, 448, 696
Bso31I GGTCTC 1 cut(s) 625
BsoBI CYCGRG 4 cut(s) 408, 485, 541, 558
Bsp1286I GDGCHC 3 cut(s) 244, 535, 735
Bsp13I TCCGGA 1 cut(s) 681
Bsp143I GATC 4 cut(s) 26, 128, 199, 569
BspANI GGCC 3 cut(s) 138, 448, 696
BspCNI CTCAG 1 cut(s) 382
BspDI ATCGAT 1 cut(s) 131
BspEI TCCGGA 1 cut(s) 681
BspFNI CGCG 3 cut(s) 456, 475, 721
BspLI GGNNCC 5 cut(s) 224, 525, 526, 571, 750
BspPI GGATC 5 cut(s) 34, 136, 207, 564, 577
BspQI GCTCTTC 2 cut(s) 4, 740
BspTNI GGTCTC 1 cut(s) 625
BsrBI CCGCTC 1 cut(s) 466
BsrFI RCCGGY 1 cut(s) 448
BsrI ACTGG 3 cut(s) 384, 434, 525
BssAI RCCGGY 1 cut(s) 448
BssECI CCNNGG 7 cut(s) 327, 408, 443, 473, 559, 626, 700
BssMI GATC 4 cut(s) 26, 128, 199, 569
BssT1I CCWWGG 2 cut(s) 327, 626
Bst6I CTCTTC 2 cut(s) 4, 740
BstC8I GCNNGC 2 cut(s) 450, 454
BstDEI CTNAG 1 cut(s) 390
BstDSI CCRYGG 1 cut(s) 473
BstFNI CGCG 3 cut(s) 456, 475, 721
BstHHI GCGC 1 cut(s) 707
BstKTI GATC 4 cut(s) 29, 131, 202, 572
BstMAI GTCTC 1 cut(s) 625
BstMBI GATC 4 cut(s) 26, 128, 199, 569
BstMCI CGRYCG 2 cut(s) 449, 657
BstPAI GACNNNNGTC 1 cut(s) 274
BstSCI CCNGG 6 cut(s) 195, 407, 408, 443, 656, 699
BstSLI GKGCMC 2 cut(s) 244, 535
BstUI CGCG 3 cut(s) 456, 475, 721
BstV1I GCAGC 2 cut(s) 45, 493
BstV2I GAAGAC 2 cut(s) 181, 285
BstX2I RGATCY 1 cut(s) 569
BstYI RGATCY 1 cut(s) 569
BstZI CGGCCG 1 cut(s) 446
Bsu15I ATCGAT 1 cut(s) 131
BsuRI GGCC 3 cut(s) 138, 448, 696
BsuTUI ATCGAT 1 cut(s) 131
BtgI CCRYGG 1 cut(s) 473
BtrI CACGTC 1 cut(s) 725
BtsI GCAGTG 1 cut(s) 244
BtsIMutI CAGTG 1 cut(s) 244
Cac8I GCNNGC 2 cut(s) 450, 454
CaiI CAGNNNCTG 2 cut(s) 618, 745
CfoI GCGC 1 cut(s) 707
Cfr10I RCCGGY 1 cut(s) 448
Cfr13I GGNCC 5 cut(s) 223, 524, 676, 694, 748
Cfr42I CCGCGG 1 cut(s) 476
Cfr9I CCCGGG 1 cut(s) 408
ClaI ATCGAT 1 cut(s) 131
Csp6I GTAC 2 cut(s) 381, 651
CviQI GTAC 2 cut(s) 381, 651
DdeI CTNAG 1 cut(s) 390
DpnI GATC 4 cut(s) 28, 130, 201, 571
DpnII GATC 4 cut(s) 26, 128, 199, 569
DraI TTTAAA 1 cut(s) 109
DraIII CACNNNGTG 1 cut(s) 153
EaeI YGGCCR 1 cut(s) 446
EagI CGGCCG 1 cut(s) 446
Eam1104I CTCTTC 2 cut(s) 4, 740
EarI CTCTTC 2 cut(s) 4, 740
EciI GGCGGA 1 cut(s) 182
EclXI CGGCCG 1 cut(s) 446
Eco130I CCWWGG 2 cut(s) 327, 626
Eco31I GGTCTC 1 cut(s) 625
Eco47I GGWCC 4 cut(s) 223, 524, 676, 748
Eco52I CGGCCG 1 cut(s) 446
Eco88I CYCGRG 4 cut(s) 408, 485, 541, 558
EcoO109I RGGNCCY 1 cut(s) 524
EcoT14I CCWWGG 2 cut(s) 327, 626
ErhI CCWWGG 2 cut(s) 327, 626
FaiI YATR 2 cut(s) 47, 647
FaqI GGGAC 4 cut(s) 372, 426, 531, 537
FauI CCCGC 3 cut(s) 252, 310, 471
FblI GTMKAC 2 cut(s) 352, 395
FspBI CTAG 2 cut(s) 102, 272
GlaI GCGC 1 cut(s) 706
GsaI CCCAGC 2 cut(s) 165, 538
HaeIII GGCC 3 cut(s) 138, 448, 696
HapII CCGG 9 cut(s) 197, 409, 445, 449, 657, 682, 700, 710, 759
HhaI GCGC 1 cut(s) 707
Hin6I GCGC 1 cut(s) 705
HinP1I GCGC 1 cut(s) 705
HincII GTYRAC 1 cut(s) 396
HindII GTYRAC 1 cut(s) 396
HinfI GANTC 5 cut(s) 253, 275, 308, 367, 392
HpaII CCGG 9 cut(s) 197, 409, 445, 449, 657, 682, 700, 710, 759
HphI GGTGA 2 cut(s) 487, 615
Hpy166II GTNNAC 4 cut(s) 353, 396, 495, 623
Hpy188I TCNGA 5 cut(s) 94, 252, 269, 366, 391
Hpy188III TCNNGA 4 cut(s) 148, 516, 558, 682
Hpy8I GTNNAC 4 cut(s) 353, 396, 495, 623
Hpy99I CGWCG 4 cut(s) 44, 400, 511, 726
HpyAV CCTTC 2 cut(s) 17, 416
HpyCH4IV ACGT 3 cut(s) 39, 398, 724
HpyF3I CTNAG 1 cut(s) 390
HpySE526I ACGT 3 cut(s) 39, 398, 724
HspAI GCGC 1 cut(s) 705
KflI GGGWCCC 1 cut(s) 524
Kpn2I TCCGGA 1 cut(s) 681
KroI GCCGGC 1 cut(s) 448
KroNI GCCGGC 1 cut(s) 450
KspI CCGCGG 1 cut(s) 476
Kzo9I GATC 4 cut(s) 26, 128, 199, 569
LguI GCTCTTC 2 cut(s) 4, 740
LmnI GCTCC 1 cut(s) 425
Lsp1109I GCAGC 2 cut(s) 45, 493
LweI GCATC 1 cut(s) 628
MaeI CTAG 2 cut(s) 102, 272
MaeII ACGT 3 cut(s) 39, 398, 724
MaeIII GTNAC 2 cut(s) 83, 563
MalI GATC 4 cut(s) 28, 130, 201, 571
MbiI CCGCTC 1 cut(s) 466
MboI GATC 4 cut(s) 26, 128, 199, 569
MboII GAAGA 4 cut(s) 21, 181, 285, 727
MflI RGATCY 1 cut(s) 569
MhlI GDGCHC 3 cut(s) 244, 535, 735
MluCI AATT 1 cut(s) 110
MlyI GAGTC 2 cut(s) 284, 401
MnlI CCTC 7 cut(s) 109, 225, 258, 550, 554, 608, 689
MroI TCCGGA 1 cut(s) 681
MroNI GCCGGC 1 cut(s) 448
MseI TTAA 1 cut(s) 108
MspA1I CMGCKG 3 cut(s) 305, 475, 745
MspI CCGG 9 cut(s) 197, 409, 445, 449, 657, 682, 700, 710, 759
MspR9I CCNGG 6 cut(s) 197, 409, 410, 445, 658, 701
MvnI CGCG 3 cut(s) 456, 475, 721
NaeI GCCGGC 1 cut(s) 450
NciI CCSGG 6 cut(s) 197, 409, 410, 445, 658, 701
NdeII GATC 4 cut(s) 26, 128, 199, 569
NgoMIV GCCGGC 1 cut(s) 448
NlaIV GGNNCC 5 cut(s) 224, 525, 526, 571, 750
PaeR7I CTCGAG 2 cut(s) 485, 541
PciSI GCTCTTC 2 cut(s) 4, 740
PdiI GCCGGC 1 cut(s) 450
PfeI GAWTC 3 cut(s) 253, 308, 367
PflFI GACNNNGTC 1 cut(s) 185
PflMI CCANNNNNTGG 1 cut(s) 745
PleI GAGTC 2 cut(s) 283, 400
PpsI GAGTC 2 cut(s) 283, 400
PpuMI RGGWCCY 1 cut(s) 524
PshAI GACNNNNGTC 1 cut(s) 274
Psp5II RGGWCCY 1 cut(s) 524
PspFI CCCAGC 2 cut(s) 161, 534
PspN4I GGNNCC 5 cut(s) 224, 525, 526, 571, 750
PspPI GGNCC 5 cut(s) 223, 524, 676, 694, 748
PspPPI RGGWCCY 1 cut(s) 524
PspXI VCTCGAGB 2 cut(s) 485, 541
PstNI CAGNNNCTG 2 cut(s) 618, 745
PsuI RGATCY 1 cut(s) 569
PsyI GACNNNGTC 1 cut(s) 185
RsaI GTAC 2 cut(s) 382, 652
RsaNI GTAC 2 cut(s) 381, 651
SacII CCGCGG 1 cut(s) 476
SalI GTCGAC 1 cut(s) 394
SapI GCTCTTC 2 cut(s) 4, 740
SaqAI TTAA 1 cut(s) 108
Sau3AI GATC 4 cut(s) 26, 128, 199, 569
Sau96I GGNCC 5 cut(s) 223, 524, 676, 694, 748
SchI GAGTC 2 cut(s) 284, 401
ScrFI CCNGG 6 cut(s) 197, 409, 410, 445, 658, 701
SduI GDGCHC 3 cut(s) 244, 535, 735
SfaNI GCATC 1 cut(s) 628
Sfr274I CTCGAG 2 cut(s) 485, 541
Sfr303I CCGCGG 1 cut(s) 476
SgrBI CCGCGG 1 cut(s) 476
SinI GGWCC 4 cut(s) 223, 524, 676, 748
SlaI CTCGAG 2 cut(s) 485, 541
SmaI CCCGGG 1 cut(s) 410
SmlI CTYRAG 2 cut(s) 485, 541
SmoI CTYRAG 2 cut(s) 485, 541
Sse9I AATT 1 cut(s) 110
SspMI CTAG 2 cut(s) 102, 272
StyD4I CCNGG 6 cut(s) 195, 407, 408, 443, 656, 699
StyI CCWWGG 2 cut(s) 327, 626
TaiI ACGT 3 cut(s) 42, 401, 727
TaqI TCGA 5 cut(s) 21, 131, 395, 486, 542
TaqII GACCGA 1 cut(s) 664
TasI AATT 1 cut(s) 110
TauI GCSGC 8 cut(s) 71, 159, 208, 217, 459, 475, 699, 745
TfiI GAWTC 3 cut(s) 253, 308, 367
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TscAI CASTG 1 cut(s) 244
TseI GCWGC 2 cut(s) 58, 481
TspDTI ATGAA 1 cut(s) 62
TspGWI ACGGA 4 cut(s) 273, 368, 428, 582
TspMI CCCGGG 1 cut(s) 408
TspRI CASTG 1 cut(s) 244
Tth111I GACNNNGTC 1 cut(s) 185
Van91I CCANNNNNTGG 1 cut(s) 745
VpaK11BI GGWCC 4 cut(s) 223, 524, 676, 748
XapI RAATTY 1 cut(s) 110
XhoI CTCGAG 2 cut(s) 485, 541
XmaI CCCGGG 1 cut(s) 408
XmiI GTMKAC 2 cut(s) 352, 395
XspI CTAG 2 cut(s) 102, 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.